mRNA_A-nodosum_M_contig1141.6.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 140 bits (352), Expect = 1.730e-35 Identity = 71/147 (48.30%), Postives = 99/147 (67.35%), Query Frame = 1
Query: 22 EWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQKFPGAVGRLNKAIYGLVQAGRCWNNK 462
EWRKA E E+ + V+++V RP+D+ +IG+K ++K K G DG+VEK+K RLVAQGF QVEG+ Y E ++P + SIR+LLA AA D E+ D + AFL +++EEIY+++P + AV RL KA+YGL QA R W K
Sbjct: 1009 EWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKK 1155
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A4Y9ZBF0_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9ZBF0_9AGAM) HSP 1 Score: 128 bits (322), Expect = 1.900e-31 Identity = 67/147 (45.58%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 25 WRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEF-QKFPGAVGRLNKAIYGLVQAGRCWNNK 462
W A E+ +VEN + V P D+ +G++ ++K K DG +E+HK RLV QGF Q G YTE ++PTP +++R +LA AA +D EL D AFL D++EEIY+ PE F +K P V RL K++YGL QAGRCW+ K
Sbjct: 684 WYSAAVEEVQALVENGTFQLVRLPPDRTALGSRWVFKVKHKSDGSIERHKARLVVQGFSQRPGFDYTETFAPTPRWSALRAVLALAAIEDLELESIDISSAFLNGDLEEEIYVRQPEGFTEKGPEWVWRLLKSLYGLKQAGRCWHKK 830
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A0J7K725_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K725_LASNI) HSP 1 Score: 128 bits (321), Expect = 2.510e-31 Identity = 62/155 (40.00%), Postives = 103/155 (66.45%), Query Frame = 1
Query: 1 MESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQKFPGAVGRLNKAIYGLVQAGRCWNNKF 465
M S + +W+ A E E+ + +N ++ V P DK I +K ++K K DG++++HK RLVA+GF Q+EGV Y+E Y+PT +I++LL+ + ++ ++ FD + AFL +++EE+Y+++P+E ++ V +L KA+YGL QA RCWN KF
Sbjct: 642 MNSSDSKKWKAAIEEELDALNQNDTWELVPLPPDKRSISSKWVFKVKRYPDGRIQRHKARLVARGFAQIEGVDYSETYAPTTRYDTIQVLLSLSVSRGLKISQFDVKTAFLHGELEEEVYMDLPDEVKESTNRVCKLKKALYGLKQAPRCWNRKF 796
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A445ESM5_ARAHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445ESM5_ARAHY) HSP 1 Score: 122 bits (306), Expect = 2.390e-30 Identity = 63/147 (42.86%), Postives = 90/147 (61.22%), Query Frame = 1
Query: 25 WRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQ-KFPGAVGRLNKAIYGLVQAGRCWNNK 462
WRKA + E+ + +N + PKDK +G K +++ K DG +E+HK RLVA+GF QV+GV Y + +SP +R++LA AAAK L+ D AFL D+D+E+Y++IP PG V +L K++YGL QA R WN K
Sbjct: 111 WRKAIQDELTALDQNRTWCLTELPKDKKAVGCKWVFRVKFNPDGTIERHKVRLVAKGFTQVQGVDYDDTFSPVVKMTILRVMLALAAAKKWHLKQLDVNTAFLHGDLDKEVYMKIPPGLAVSQPGLVCKLQKSLYGLKQASRQWNIK 257
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR) HSP 1 Score: 124 bits (311), Expect = 5.470e-30 Identity = 67/149 (44.97%), Postives = 89/149 (59.73%), Query Frame = 1
Query: 25 WRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEF--QKFPGAVGRLNKAIYGLVQAGRCWNNKF 465
W A +EM M +N V+D V P +G+K ++KRK G V +K RLVA+GF Q +GV Y E +SP SIR+LLA AA D E+ D + AFL + E++Y+ PE F K+P V +LNK+IYGL QA RCWN +F
Sbjct: 481 WLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWNLRF 629
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY) HSP 1 Score: 122 bits (305), Expect = 1.120e-29 Identity = 64/147 (43.54%), Postives = 93/147 (63.27%), Query Frame = 1
Query: 22 EWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQKFPGAVGRLNKAIYGLVQAGRCWNNK 462
+W+ A EML V+ ++D+V PK++ V+G+K +++ K G +GK+EK+K RLVAQGF QV+G+ YTE ++P SIR LL+ AA D E+ D + AFL D+DEEIY++ P G V +L K++Y L QA W K
Sbjct: 8 QWKIACAQEMLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIRTLLSLAAKLDLEIHQMDVKSAFLNGDLDEEIYMKCPPGHHAKEGIVWKLKKSLYELKQASCEWYKK 154
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A5N6MMD4_9ASTR (Uncharacterized protein n=6 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MMD4_9ASTR) HSP 1 Score: 123 bits (308), Expect = 1.420e-29 Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 1
Query: 25 WRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEF--QKFPGAVGRLNKAIYGLVQAGRCWNNKF 465
W A +EM M +N V+D V P +G+K ++KRK G V +K RLVA+GF Q +GV Y E +SP SIR+LLA AA D E+ D + AFL + E++Y+ P+ F K+P V +LNK+IYGL QA RCWN +F
Sbjct: 814 WLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRVLLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVCKLNKSIYGLKQASRCWNLRF 962
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A8J6LHG9_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LHG9_TENMO) HSP 1 Score: 123 bits (308), Expect = 1.460e-29 Identity = 63/149 (42.28%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 19 DEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQKFPGAVGRLNKAIYGLVQAGRCWNNKF 465
++W++A + E+ + +N + V PK++ VI + +Y K +DG V+K+K RLVA+GF QV GV Y E +SP SIRM+L AA++ LR FD + AFL +IDE +Y++ P+ +Q V +LN+++YGL QA RCWN +F
Sbjct: 211 EQWKQAMDEEIQSLKQNQTWTLVEPPKNQQVIDNRWVYIIKRNEDGSVQKYKARLVARGFRQVAGVDYNETFSPVTKFDSIRMILCVAASEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRF 359
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A8J6LFP5_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LFP5_TENMO) HSP 1 Score: 122 bits (305), Expect = 2.560e-29 Identity = 62/147 (42.18%), Postives = 93/147 (63.27%), Query Frame = 1
Query: 25 WRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQKFPGAVGRLNKAIYGLVQAGRCWNNKF 465
W++A + E+ + +N + V PK++ I + +YK K +DG V+K+K RLVA+GF QV GV Y E +SP SIRM+L A ++ LR FD + AFL +IDE +Y++ P+ +Q V +LN+++YGL QA RCWN +F
Sbjct: 148 WKQAMDEEIQSLKQNQTWTLVEPPKNQQFIDNRWVYKIKRNEDGSVQKYKARLVARGFRQVAGVDYNETFSPVTKFDSIRMILCVAVSEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRF 294
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Match: A0A5N6LS40_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LS40_9ASTR) HSP 1 Score: 120 bits (302), Expect = 8.950e-29 Identity = 64/143 (44.76%), Postives = 87/143 (60.84%), Query Frame = 1
Query: 43 TEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKHKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEF--QKFPGAVGRLNKAIYGLVQAGRCWNNKF 465
+EM M +N V+D V P +G+K ++KRK G V +K RLVA+GF Q +GV Y E +SP SIR+LLA AA D E+ D + AFL + E++Y+ P+ F K+P V +LNK+IYGL QA RCWN +F
Sbjct: 767 SEMQSMCDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVYKLNKSIYGLKQASRCWNLRF 909 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1141.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1141.6.1 >prot_A-nodosum_M_contig1141.6.1 ID=prot_A-nodosum_M_contig1141.6.1|Name=mRNA_A-nodosum_M_contig1141.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=157bp MESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQback to top mRNA from alignment at A-nodosum_M_contig1141:80458..80928- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1141.6.1 ID=mRNA_A-nodosum_M_contig1141.6.1|Name=mRNA_A-nodosum_M_contig1141.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=471bp|location=Sequence derived from alignment at A-nodosum_M_contig1141:80458..80928- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1141:80458..80928- >mRNA_A-nodosum_M_contig1141.6.1 ID=mRNA_A-nodosum_M_contig1141.6.1|Name=mRNA_A-nodosum_M_contig1141.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=471bp|location=Sequence derived from alignment at A-nodosum_M_contig1141:80458..80928- (Ascophyllum nodosum dioecious)back to top |