mRNA_A-nodosum_M_contig1139.44.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: D7G5Y3_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y3_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 5.220e-12 Identity = 34/54 (62.96%), Postives = 39/54 (72.22%), Query Frame = 2
Query: 17 TGGHYATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYEV 178
T GHY TLG+KS ATTAEVK+AYR+LA Q HPDK G+ A A K + AYEV
Sbjct: 354 TSGHYTTLGIKSTATTAEVKKAYRKLALQHHPDKNQGNEASANIFKDVTAAYEV 407
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: F0Y0R6_AURAN (J domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0R6_AURAN) HSP 1 Score: 59.7 bits (143), Expect = 1.680e-10 Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 2
Query: 26 HYATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYEV 178
HY TLG+K A AE+K+AYR LA+Q HPDK G+A AE+ + +AYEV
Sbjct: 2 HYRTLGVKPRAKEAEIKKAYRSLAKQWHPDKNPGNAQAAEKFSEIASAYEV 52
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: A0A086Y4C5_9RHOB (Molecular chaperone DnaJ n=1 Tax=Paenirhodobacter enshiensis TaxID=1105367 RepID=A0A086Y4C5_9RHOB) HSP 1 Score: 63.9 bits (154), Expect = 1.840e-10 Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 2
Query: 29 YATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYEV 178
Y LG+ AT A++K+AYR+LAR+LHPD TGGDA +E+ KA+N AY++
Sbjct: 10 YQVLGVSKTATDADIKKAYRKLARELHPDLTGGDAKKSERFKAVNEAYDL 59
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: A0A519T739_9BACT (J domain-containing protein (Fragment) n=1 Tax=Hymenobacter sp. TaxID=1898978 RepID=A0A519T739_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 6.500e-10 Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 2
Query: 14 ITGGHYATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYEV 178
++ HY LG+ A TA++KRAYR LA +LHPDK GGD E+ KA+ AY V
Sbjct: 1 MSQNHYQVLGVPPTAPTADIKRAYRRLATELHPDKHGGDRHYEERFKAIAVAYGV 55
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: A0A443K323_9RHOB (J domain-containing protein n=3 Tax=Sinirhodobacter populi TaxID=2306993 RepID=A0A443K323_9RHOB) HSP 1 Score: 62.4 bits (150), Expect = 6.700e-10 Identity = 27/50 (54.00%), Postives = 40/50 (80.00%), Query Frame = 2
Query: 29 YATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYEV 178
Y LG+ A+ AE+K+AYR+LA++LHPD TGGDAA A++ KA++ AY++
Sbjct: 9 YEVLGVAKTASDAEIKKAYRKLAKELHPDLTGGDAAKADRFKAVSAAYDL 58
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: A0A382DDQ9_9ZZZZ (J domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382DDQ9_9ZZZZ) HSP 1 Score: 58.2 bits (139), Expect = 6.840e-10 Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 2
Query: 29 YATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYE 175
Y LG+ + A+ AE+KRAYR+LARQ HPD+ DAA E+ KA+ AYE
Sbjct: 6 YRVLGVSNDASDAEIKRAYRKLARQYHPDRNPDDAAAEERFKAIQAAYE 54
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: A0A382UFE0_9ZZZZ (J domain-containing protein (Fragment) n=2 Tax=root TaxID=1 RepID=A0A382UFE0_9ZZZZ) HSP 1 Score: 61.6 bits (148), Expect = 8.020e-10 Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 2
Query: 29 YATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYE 175
Y LG+ S AT AE+KRAYR+LARQ HPD+ GDAA E+ KA+ +YE
Sbjct: 6 YRVLGVSSDATDAEIKRAYRKLARQHHPDRNPGDAAAEERFKAIQASYE 54
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: A0A7M3Y2F6_9ARCH (J domain-containing protein (Fragment) n=2 Tax=Candidatus Poseidoniales TaxID=133814 RepID=A0A7M3Y2F6_9ARCH) HSP 1 Score: 60.5 bits (145), Expect = 8.060e-10 Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 2
Query: 29 YATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYE 175
Y LG+ AT AE+KR+YR+LARQ HPD+ GDAA EQ K++ ++YE
Sbjct: 6 YRVLGVSKDATDAEIKRSYRKLARQYHPDRNPGDAAAEEQFKSIQSSYE 54
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: A0A352CHP3_9BACT (Molecular chaperone DnaJ (Fragment) n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A352CHP3_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 8.410e-10 Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 2
Query: 26 HYATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYEV 178
HY TLGL AT ++K+A+R+LA LHPDKTG D AL+ + + AYEV
Sbjct: 8 HYQTLGLAPGATAEQIKKAFRKLALDLHPDKTGNDPALSVRFSEIQRAYEV 58
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Match: A0A7X6SKZ1_9ACTN (J domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6SKZ1_9ACTN) HSP 1 Score: 59.7 bits (143), Expect = 9.110e-10 Identity = 28/55 (50.91%), Postives = 34/55 (61.82%), Query Frame = 2
Query: 14 ITGGHYATLGLKSCATTAEVKRAYRELARQLHPDKTGGDAALAEQMKALNTAYEV 178
+T HY LG+ AT E+K+AYR LARQ HPD GDAA + K + AYEV
Sbjct: 6 VTADHYEALGVSRTATAEEIKKAYRRLARQYHPDTNPGDAAAEAKFKEVAHAYEV 60 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1139.44.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1139.44.1 >prot_A-nodosum_M_contig1139.44.1 ID=prot_A-nodosum_M_contig1139.44.1|Name=mRNA_A-nodosum_M_contig1139.44.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=64bp GFQEDNRWPLRHARAQVLRHHGRSQASLQGAGEAAPPRQDRGGRCSRRANback to top mRNA from alignment at A-nodosum_M_contig1139:249114..249544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1139.44.1 ID=mRNA_A-nodosum_M_contig1139.44.1|Name=mRNA_A-nodosum_M_contig1139.44.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=431bp|location=Sequence derived from alignment at A-nodosum_M_contig1139:249114..249544- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1139:249114..249544- >mRNA_A-nodosum_M_contig1139.44.1 ID=mRNA_A-nodosum_M_contig1139.44.1|Name=mRNA_A-nodosum_M_contig1139.44.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=192bp|location=Sequence derived from alignment at A-nodosum_M_contig1139:249114..249544- (Ascophyllum nodosum dioecious)back to top |