mRNA_A-nodosum_M_contig11337.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig11337.1.1
Unique NamemRNA_A-nodosum_M_contig11337.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: A0A6H5KBE8_9PHAE (Pyruvate dehydrogenase E1 component subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBE8_9PHAE)

HSP 1 Score: 593 bits (1528), Expect = 1.410e-211
Identity = 286/359 (79.67%), Postives = 312/359 (86.91%), Query Frame = 1 
Query:    1 MPTEAVTDREELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEEELYSNIWVAGENYEKPVIPGFVRLPDRAKSIGNIMGDVVV 993
            +PTEA T+REELMSYFKLMYTMRRMEITCDTEYK                            DSWITSYRCHC ALARGGTVE++FAELFGFKEG+SRGKGGSMH+Y K H+FFGG GIVGAQVP+GTGLAFA KY+ PAGEDTPVA+AMYGDGAANQGQIWE++NMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPG KLDGMNVLM+ +GFAF K+WC+KGNGPIY+EVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDP+E VKNLLVDN L EAQELK+IEKDIRKEVQEALK+AKGGT PP+EELYSNIWVAGE YE PV P ++R+PDR+KS+GNIM DVVV
Sbjct:   57 LPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWVAGEKYETPVTPAYIRMPDRSKSVGNIMSDVVV 415
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BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: A0A835Z5P4_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P4_9STRA)

HSP 1 Score: 516 bits (1329), Expect = 2.100e-181
Identity = 250/353 (70.82%), Postives = 285/353 (80.74%), Query Frame = 1 
Query:    1 MPTEAVTDREELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEEELYSNIWVAGENYEKPVIPGFVRLPDRAKSIGNI 975
            MP EAVT++EEL+ YFKLMYTMRRMEITCDTEYK                            DSWITSYRCHC +L RGGTVE+IFAEL G+ EG+S GKGGSMH+Y K HNF+GG GIVGAQVP+G GL+FA KY TP GE TPVA+AMYGDGAANQGQIWE +NMASLWKLPMI+CIENNQYGMGTSKERSSSN+ YYTMGNHIPG+++DGMNVLMV +G    KEWC+ GNGPIYVE DTYRYHGHSMSDPGTTYRNRDEIASMRTARDP+E VKNLLV ++L + QELK IEKDIRKEVQ+ALK AK G++P  EELY +I++ GE+  K V P ++R+PDRAKSIG+I
Sbjct:   48 MPKEAVTNKEELLGYFKLMYTMRRMEITCDTEYKARAIRGFCHLYDGQEAVAMGVEAAFDQKDSWITSYRCHCISLLRGGTVESIFAELLGYSEGVSHGKGGSMHMYSKKHNFYGGQGIVGAQVPVGVGLSFAAKYATPPGEKTPVAIAMYGDGAANQGQIWEGANMASLWKLPMIFCIENNQYGMGTSKERSSSNNKYYTMGNHIPGVRMDGMNVLMVREGMKAAKEWCSTGNGPIYVESDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEYVKNLLVQHNLADPQELKNIEKDIRKEVQDALKAAKNGSIPKFEELYKDIYIGGEDNSKIVYPAYIRMPDRAKSIGSI 400
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BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: A0A4D9DDV1_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDV1_9STRA)

HSP 1 Score: 444 bits (1141), Expect = 7.360e-153
Identity = 218/351 (62.11%), Postives = 263/351 (74.93%), Query Frame = 1 
Query:    4 PTEAVTDREELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEEELYSNIWV---AGENYEKPVIPGFVRLPDRAKS 963
            PT A   +EEL+ Y +LMYTMRRMEITCDTEYK                            DSWITSYRCHC AL+RG TVE I +ELFGFKEG  +GKGGSMH Y KSHNF+GG GIVGAQVP+GTGLAFA +Y TP GE+ PVA+AMYGDGAANQGQIWE++NMA+LWKLPMI+CIENNQYGMGTS ERSSSN+ Y+TMGN IPGI++DGMNV+ V +G  F K++   GNGP++VE++TYRYHGHSMSDPGTTYRNRDEI   R+ RDP+E VK  L+++ L+   ++KE+EK IRKEVQ+ALK+AK G+ PP EEL+ +I+     G  Y     P ++R+PDR KS
Sbjct:   57 PTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKHIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQY-----PPYIRMPDRTKS 402
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BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: A0A7S0GGJ8_9STRA (Pyruvate dehydrogenase E1 component subunit alpha (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GGJ8_9STRA)

HSP 1 Score: 424 bits (1089), Expect = 6.770e-146
Identity = 210/337 (62.31%), Postives = 245/337 (72.70%), Query Frame = 1 
Query:   25 REELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEEELYSNIWVAGENYEKPVIPGFVRLPD 951
            + ELM++FKLMY MRRMEIT D EYK                            DSWITSYRCHC ALARGGT+E +  ELFGF  GMS+GKGGSMH Y K HNF+GG GIVGAQVP GTGLAFA KY TP GE  PVA+A YGDGAANQGQIWES+NMASLWKLPMI+CIENN YGMGTS ER SS++ Y+ MGNHIPG+++DGMNVL V++G  F KE+CA GNGP+YVE+ TYRYHGHSMSDPGTTYRNR+EIA  R+ RDP+E +K  ++D     A+ELKE+EK IRKEVQ  +K+AK   VPP EEL+S I+             F+R+PD
Sbjct:    7 QSELMAHFKLMYMMRRMEITFDNEYKARTIRGFCHLYDGQEAVATGIDSVFTQEDSWITSYRCHCVALARGGTIEQVAGELFGFVNGMSKGKGGSMHFYNKEHNFYGGDGIVGAQVPKGTGLAFANKYNTPPGEAMPVAIACYGDGAANQGQIWESANMASLWKLPMIFCIENNHYGMGTSIERHSSHNDYFKMGNHIPGVRIDGMNVLAVKEGMRFVKEFCANGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPIEFLKKTMIDAGFTNAEELKELEKKIRKEVQSQVKKAKESHVPPPEELFSYIYAKDTGKGNQEAVPFIRMPD 343
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BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: W7TQD1_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQD1_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 1.520e-145
Identity = 221/357 (61.90%), Postives = 265/357 (74.23%), Query Frame = 1 
Query:    4 PTEAVTDREELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEEELYSNIWV---AGENYEKPVIPGFVRLPDRAKSIGNIMG 981
            PT A   +EEL+ Y +LMYTMRRMEITCDTEYK                            DSWITSYRCHC AL+RG TVE I +ELFGFKEG  +GKGGSMH Y KSHNF+GG GIVGAQVP+GTGLAFA +Y TP GE+ PVA+AMYGDGAANQGQIWE++NMA+LWKLPMI+CIENNQYGMGTS ERSSSN+ Y+TMGN IPGI++DGMNV+ V +G  F KE+   GNGP++VE++TYRYHGHSMSDPGTTYRNRDEI   R+ RDP+E VK  L+++ L+   ++KE+EK IRKEVQ+ALK+AK G+ PP EEL+ +I+     G  Y     P ++R+PDR KS    MG
Sbjct:  696 PTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQY-----PPYIRMPDRTKSRTFAMG 1047
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BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: A0A8J2SEA3_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEA3_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 1.040e-141
Identity = 212/347 (61.10%), Postives = 246/347 (70.89%), Query Frame = 1 
Query:   13 AVTDREELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPE-EELYSNIWVAGENYEKPVIPGFVRLPDRAKSI 966
            A T++ EL+ YFK MYTMRRMEITCD EYK                            DSWITSYRCHC ALARGGTVE + AEL G   G + GKGGSMH Y K HNFFGG GIVGAQVP+GTGLAFA KY TP GE  PVA+  YGDGAANQGQIWES NMA+LWKLPMI+CIENNQYGMGTS  RSS N+ YYTMGN IPG+K+DGMNVL V +G    +++ ++GNGP+ VE+ TYRYHGHSMSDPGTTYRNRDEIA+MR  RDP+E VKNLL+++      ELK IEKD+R EV  A  RAK G+ P   +EL  NI++  E  + P    ++R+PD  KSI
Sbjct:   44 AETNKTELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGVQAALSPEDSWITSYRCHCIALARGGTVEGVLAELMGQSHGQTGGKGGSMHFYNKEHNFFGGQGIVGAQVPVGTGLAFANKYKTPLGEPMPVAIGCYGDGAANQGQIWESMNMAALWKLPMIFCIENNQYGMGTSISRSSCNNDYYTMGNVIPGLKMDGMNVLSVREGMKHVRDYVSQGNGPMVVEMSTYRYHGHSMSDPGTTYRNRDEIAAMRQTRDPIEFVKNLLLEHTDATEDELKAIEKDVRAEVAAACDRAKAGSPPSSIDELVGNIYLDAEGKDVP--QPYIRMPDYEKSI 388
[Close]
BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: A0A7S1Z3N8_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3N8_TRICV)

HSP 1 Score: 413 bits (1062), Expect = 6.310e-141
Identity = 202/341 (59.24%), Postives = 248/341 (72.73%), Query Frame = 1 
Query:   25 REELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEEELYSNIWVAGENYEKPVIPGFVRLPDRAKS 963
            ++ELM +F+LMYTMRRMEITCD EYK                            D WITSYRCHC ALARGG+V A+ +ELFG  EGMS+ KGGSMH Y K H+F+GGAGIVGAQVP+G GL+FA KY    GED  VA+A YGDGAANQGQIWE++NMASLWKLPMI+CIENN YGMGTS +R SS+S YY MGNHIPGI++DGMN+L V++G +F +++C+ GNGP+YVE+ TYRYHGHSMSDPGTTYRNR+EIA  R+ RDP+E VK  L+D    +A E+KE+EK IR+EVQE +  AK G  P  EEL+ +++      +    P  +R+PD AKS
Sbjct:   59 KDELMKHFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAALAPEDDWITSYRCHCQALARGGSVGAVISELFGMVEGMSKAKGGSMHFYNKKHHFWGGAGIVGAQVPVGVGLSFANKYNAKPGEDMNVAIACYGDGAANQGQIWEAANMASLWKLPMIFCIENNHYGMGTSIDRHSSHSDYYKMGNHIPGIRIDGMNLLAVKRGMSFVRDFCSSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKTLMDAGFADADEIKEVEKRIRREVQEEVSEAKKGNRPGLEELFKHVYAKSMEKDDYEYPPHIRMPDHAKS 399
[Close]
BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: F0Y4Q8_AURAN (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Q8_AURAN)

HSP 1 Score: 412 bits (1059), Expect = 1.200e-140
Identity = 212/348 (60.92%), Postives = 248/348 (71.26%), Query Frame = 1 
Query:   13 AVTDREELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEE--ELYSNIWVAGENYEKPVIPGFVRLPDRAKSI 966
            A T +EEL+ YFK MYTMRRMEITCD EYK                            DSWITSYRCHC  LARGGTVE + AEL G   G + GKGGSMH Y K  NF+GG GIVGAQVP+GTGLAFA KY TP GE  PVA+  YGDGAANQGQIWE++NMA+LWKLPMI+CIENNQYGMGTS  RSSSN+ YYTMGN IPGIK+DGMNVL V +G    K++   GNGP+YVE+ TYRYHGHSMSDPGTTYRNRDEIA+MR+ RDP+E VK +LVD+     +ELK +EK IRKEV +A  RAK G  PP+   +L +NI++  +   +P    ++R+PD  KSI
Sbjct:   44 AETSKEELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGINAALDLEDSWITSYRCHCIMLARGGTVEGVLAELMGNAHGETGGKGGSMHFYNKEQNFYGGQGIVGAQVPVGTGLAFANKYKTPLGEKMPVAIGCYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSISRSSSNNDYYTMGNLIPGIKMDGMNVLSVREGMKHVKDYVGSGNGPMYVEMSTYRYHGHSMSDPGTTYRNRDEIAAMRSTRDPIEHVKKMLVDHTDATEEELKAMEKVIRKEVADACDRAKAGA-PPDSIADLTNNIYLTEDGKSEP--QAYIRMPDYTKSI 388
[Close]
BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: A0A6V2BH17_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BH17_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 2.210e-140
Identity = 206/349 (59.03%), Postives = 245/349 (70.20%), Query Frame = 1 
Query:    4 PTEAVT-DREELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEEELYSNIWVAGENYEKPVIPGFVRLPDRAKS 963
            P E +  D+EELM +FK MYT+RRMEITCD EYK                            DSWITSYRCHC AL RGGTV  +  ELFG  EG S+ KGGSMH Y K HNF+GGAGIVGAQVP+G GLAFA KY    GE   +AVA YGDGAANQGQIWES+NMASLWKLPM++CIENNQYGMGTS +R SS+S Y+ MGNHIPGI++DGMNVL V+ GF F KE+C  GNGP+Y E+ TYRYHGHSMSDPGTTYRNR+EIA  R+ RDP+E VK  L+D    +A E+K++EK IRK+VQE +  AK    P  +EL  +++ A  +     +P  +R+PD AKS
Sbjct:   56 PEETIEMDKEELMQHFKTMYTVRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAAITQEDSWITSYRCHCQALLRGGTVRKVIGELFGSVEGYSKSKGGSMHFYNKEHNFYGGAGIVGAQVPIGAGLAFANKYNAKPGEPMNIAVACYGDGAANQGQIWESANMASLWKLPMVFCIENNQYGMGTSIDRHSSHSDYFKMGNHIPGIRIDGMNVLAVKAGFEFIKEFCGNGNGPMYAELMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKTLIDAGFADADEIKQVEKQIRKQVQEEVMLAKQDPKPTLDELIKHVYAADTSIGNYEMPDHIRMPDFAKS 404
[Close]
BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Match: A0A7S3Q1P9_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1P9_9STRA)

HSP 1 Score: 407 bits (1046), Expect = 1.750e-138
Identity = 209/350 (59.71%), Postives = 245/350 (70.00%), Query Frame = 1 
Query:   10 EAVTDREELMSYFKLMYTMRRMEITCDTEYK----------------------------DSWITSYRCHCAALARGGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGTGLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKEWCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVKNLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEEELYSNIW---VAGENYEKPVIPGFVRLPDRAKSI 966
            E    +EEL+ +F+LMYTMRRMEITCD EYK                            DSWITSYRCHC ALARGG V  I AELFG K GM+ GKGGSMH Y K +NFFGG GIVGAQVP+GTGLAFA KY    GED  VA+A YGDGAANQGQIWE++NMASLWKLPMI+CIENN YGMGTS ER SS+S YY MGNHIPG+++DGMN+L V++G  F KE C  GNGP+YVE+ TYRYHGHSMSDPGTTYRNR+EIA  R+ RDP+E VK  L++    EA E+K IEK IRKEVQ   K+AK        +++  ++   +AG   EK     F+R+PD AKS+
Sbjct:   55 EITMSKEELLGHFQLMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAAFDKEDSWITSYRCHCIALARGGKVNEILAELFGNKGGMTDGKGGSMHFYSKKNNFFGGQGIVGAQVPVGTGLAFANKYNAKPGEDMNVAIACYGDGAANQGQIWEAANMASLWKLPMIFCIENNHYGMGTSMERHSSHSDYYKMGNHIPGVRIDGMNILAVKEGMRFVKEHCGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAMTRSTRDPLEFVKKTLMEAGFAEADEIKSIEKRIRKEVQAETKKAKEYPDVELSDMFDYVYADEMAGRKQEK---QDFIRMPDYAKSV 401
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11337.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBE8_9PHAE1.410e-21179.67Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A835Z5P4_9STRA2.100e-18170.82Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A4D9DDV1_9STRA7.360e-15362.11Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A7S0GGJ8_9STRA6.770e-14662.31Pyruvate dehydrogenase E1 component subunit alpha ... [more]
W7TQD1_9STRA1.520e-14561.90Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A8J2SEA3_9STRA1.040e-14161.10Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A7S1Z3N8_TRICV6.310e-14159.24Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
F0Y4Q8_AURAN1.200e-14060.92Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A6V2BH17_9STRA2.210e-14059.03Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A7S3Q1P9_9STRA1.750e-13859.71Pyruvate dehydrogenase E1 component subunit alpha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11337contigA-nodosum_M_contig11337:6816..10317 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIP4
Preferred namePDHA1
PFAMsE1_dh
Model size996
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00027,RC00627,RC02742,RC02744,RC02882
KEGG koko:K00161,ko:K05694
KEGG ReactionR00014,R00209,R01699,R03270
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04520,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04520,map04922,map05230
KEGG ModuleM00307
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004738,GO:0004739,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005967,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006091,GO:0006099,GO:0006101,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007124,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009060,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009295,GO:0009628,GO:0009651,GO:0009987,GO:0010035,GO:0010038,GO:0015980,GO:0016049,GO:0016491,GO:0016620,GO:0016624,GO:0016903,GO:0016999,GO:0017144,GO:0018130,GO:0019362,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030447,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034603,GO:0034604,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0040007,GO:0042221,GO:0042645,GO:0043167,GO:0043169,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045254,GO:0045333,GO:0046390,GO:0046483,GO:0046496,GO:0046686,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0070783,GO:0071616,GO:0071704,GO:0072350,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0098798,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204
Exons7
Evalue2.43e-220
EggNOG OGsCOG0462@1|root,KOG0225@2759|Eukaryota
Ec32 ortholog descriptionPyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (PDHE1-A)
Ec32 orthologEc-27_000530.1
EC1.2.4.1,3.1.3.48
Descriptionpyruvate dehydrogenase (acetyl-transferring) activity
Cds size996
COG categoryC
BiGG ReactioniMM904.YER178W,iND750.YER178W
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko01009,ko04516
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11337.1.1prot_A-nodosum_M_contig11337.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig11337 6816..10317 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866539.4290712-CDS-A-nodosum_M_contig11337:6815..69171680866539.4290712-CDS-A-nodosum_M_contig11337:6815..6917Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11337 6816..6917 +
1680866539.5576396-CDS-A-nodosum_M_contig11337:7900..80661680866539.5576396-CDS-A-nodosum_M_contig11337:7900..8066Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11337 7901..8066 +
1680866539.5700057-CDS-A-nodosum_M_contig11337:8421..85851680866539.5700057-CDS-A-nodosum_M_contig11337:8421..8585Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11337 8422..8585 +
1680866539.580574-CDS-A-nodosum_M_contig11337:8844..89911680866539.580574-CDS-A-nodosum_M_contig11337:8844..8991Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11337 8845..8991 +
1680866539.5889938-CDS-A-nodosum_M_contig11337:9264..93351680866539.5889938-CDS-A-nodosum_M_contig11337:9264..9335Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11337 9265..9335 +
1680866539.603967-CDS-A-nodosum_M_contig11337:9644..98221680866539.603967-CDS-A-nodosum_M_contig11337:9644..9822Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11337 9645..9822 +
1680866539.8252447-CDS-A-nodosum_M_contig11337:10149..103171680866539.8252447-CDS-A-nodosum_M_contig11337:10149..10317Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11337 10150..10317 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig11337.1.1

>prot_A-nodosum_M_contig11337.1.1 ID=prot_A-nodosum_M_contig11337.1.1|Name=mRNA_A-nodosum_M_contig11337.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=332bp
MPTEAVTDREELMSYFKLMYTMRRMEITCDTEYKDSWITSYRCHCAALAR
GGTVEAIFAELFGFKEGMSRGKGGSMHLYKKSHNFFGGAGIVGAQVPLGT
GLAFAGKYTTPAGEDTPVAVAMYGDGAANQGQIWESSNMASLWKLPMIYC
IENNQYGMGTSKERSSSNSTYYTMGNHIPGIKLDGMNVLMVEKGFAFCKE
WCAKGNGPIYVEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPVELVK
NLLVDNDLVEAQELKEIEKDIRKEVQEALKRAKGGTVPPEEELYSNIWVA
GENYEKPVIPGFVRLPDRAKSIGNIMGDVVV*
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mRNA from alignment at A-nodosum_M_contig11337:6816..10317+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig11337.1.1 ID=mRNA_A-nodosum_M_contig11337.1.1|Name=mRNA_A-nodosum_M_contig11337.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3502bp|location=Sequence derived from alignment at A-nodosum_M_contig11337:6816..10317+ (Ascophyllum nodosum dioecious)
ATGCCTACGGAGGCCGTCACCGACCGTGAGGAGCTCATGTCTTACTTCAA
GCTCATGTACACCATGCGACGGATGGAGATCACCTGCGACACCGAATACA
AGGTGAAGTGTCGCACAAGAAAGGCGCCCTACTCTTCATCTCGATTTCTT
CGTTATTTAGAGTTTATTGAAAATTTTGAACGCATGCAAACCTTGCAAGC
ATCCACACCACTACAGTATACTTGTACAGTAAGGAGGAAGCGTGTCGAAA
CATTCATTAGGTGCAACACCGGCTGTTAGCAGAGAACCTCTACATACGGT
TCAGCTGTCGTGTCCGCGAGTCGCTCCCTGTGCCGCGGTTAGATCCGTCC
GCGCGCCGCGTGCCTCGTGTCGTCTACTGTGACATTGAGTGGTCTTTTCC
ACTGCCACTACTGATTGCGCTTTTTGTTGTTTTGGTGGCGGAACGAGTCG
CCTTGTTTCGAGTACGCGTATCAGAAAGTATCGTGACACGGTGACTTTTA
CTGCTGCGCTTCAAAAGTTCGCGCGCCTGTGGTATTGATACTGTAGTTGT
CATCGTCGTTCATGGAGTGACCTCCGGGGATCCGAGAACATGCATGGCGG
AAGATAAATCAAGATCAAGTTCTCCTTCAGGCTTATGTTGAGAGTGTGAT
GAGGTCACATCCGTCGCATATGAGGACTTTAGCTGGTTCCGATGCACATC
ACTCAGTATCCTTCCTGTAACTTCGTTGCTCGTCTGCCGCAGGCACGAAC
GATCCGTGGGTTCTGCCACCTGTACGATGGGCAAGAGGCCGTGGCTGCTG
GTGTAGAAGCGGCCCTTAGCGTTACGGTGGGTACTGTTTTGCCGCTGATC
GCGTTCATTCGAGCCGGAGAGGACGACGGGGTTGACACCGTGGTGGTTCT
GCAGCAAAAGACAGGATAACACGACTTTTGTCGCTTTAGAGCCTCGTCGT
TCAAGGAGGTCATCGTTCGAGTAGCTGACCCGCGATCGACTTCACATTTC
CATTATTGTCACGCTAAGCCTCTCCGGCTTACACGAAATGTTACTGCACA
CACACGAATCTTCCATGCGCTCTCGCGTCTGATAGGACTCGTGGATCACG
TCGTACCGATGCCACTGCGCGGCGCTGGCGCGAGGGGGCACCGTAGAGGC
CATTTTCGCGGAGCTGTTTGGTTTCAAGGAGGGCATGTCTCGAGGGAAGG
GCGGGTCGATGCACTTGTACAAAAAATCGCACAACTTCTTCGGGGGAGCG
GGTGAGATGTGTGTTCAGATTAAAATCGAAGGGTTCTTAGGTAAAGCTCC
CCCGTAGACTTCGCGGTACGATTGTGTTACATCCCGTCGCGTATTGCAAG
TTGCCCCCTGCCATGATGTAAAAGACAGCAGGCACATTATTGCGGGAAGG
GTATCGAGCGCATGGTTGACTCCATCAGCTTCATTTGCCCCTTACCTCCT
GAGCTCATATTCACGCGAAGCACGACCCTAGCGTTACTCCGATCTGTTCG
AAGATATTTCAGCCCTGCCTTCCCATGATGGACTGTGGTGATATCACTTG
CGGCGCAATGCATCGAAACGACTCCATGCCTCGATCCGGGTATTTGCGCA
CGACAGGTATTGTGGGGGCGCAGGTGCCTCTTGGCACCGGGTTGGCGTTC
GCTGGCAAGTACACCACCCCGGCGGGCGAGGATACACCTGTTGCCGTCGC
CATGTACGGGGATGGCGCTGCCAACCAGGGTCAGATCTGGGAATCGTCGA
ACATGGCATCCTTGTGGAAGGTGAAATAATGACCTGTTACTTGCGGGCTC
TTTGCGGCTTGCGTTTCGGGTGCGAGCTTTTCCCCTTATCATGGCCGCTT
TCCTCCCATCATTGAGGTGTAGTCTTACTAACTGTGTTGGATTGAGATGG
GACGGGTTACTGTCGTCTGCGGAGCGTCGAGTGGAATTACGACTACACGA
ACTACATCACTCGCTCGCAGCTGGGGGGGGTCAAAATCGTGCGCATCTCA
ACGCTTTTCGCGACCGTCTCTTGTCGCAGCTGCCCATGATCTACTGTATC
GAGAACAACCAGTACGGCATGGGCACATCCAAGGAGCGCTCGTCGTCTAA
CTCCACCTACTACACCATGGGCAACCACATCCCCGGCATCAAGCTGGACG
GCATGAACGTGCTCATGGTCGAGAAGGTTAGCGCCCTCGCACTGGAGCGG
CGAACGACGGCCGTCGTAGCCGAAGACAGTGCTGTCTCAAATCATTTATT
TCTCATGGACAGCCTCATTTGAAAAAATCTACTATTAATACCTGGTAGTA
GTTAACAAGGGACAGTTCGGGCCTTGTGGAGTAAAAAACGAGCATGTTTA
TCGCTCGCGTCGCTTTTTTCATTCGGGTGGTCTTTTGCTCGGCGCCGCTG
CTGAAGAGCATTTCACCCTTCCCGCCACGTTGTTGCTGATCGGCCTCAGG
GCTTTGCCTTCTGCAAAGAGTGGTGCGCTAAGGGCAACGGCCCTATTTAC
GTCGAGGTAGACACCTACAGGTGAGCTATACGGTCGGCTATGGTTGTTTC
TGGTCGTGCGCCATCGAGCTCTGCGATTGACTGGATCGTCAGGGAGAGGC
CGTCCCCAAAAAGAGTTTGTTGGCCGGAACACATTTGCGCTAAATAGGTG
GTATATTGCGTAGTTGCGGATGATATTCGCCCGCGCCGAGTTGCCGCCAG
CCTGAAAAGTCTCCAGCCTTGGAAGATTATGACATGCATCCGTACTGTTG
TCGCTGATCAGCGTTCCACACGCTTTTTCGAATGTACGTCCAACATTCCT
TGAATGGAACGCTGTTGTCGGCGGAATAGGTACCACGGGCACTCCATGTC
CGACCCCGGGACCACGTACCGCAACCGCGACGAGATTGCGTCGATGCGTA
CGGCGCGCGATCCCGTTGAACTGGTCAAGAACCTTCTCGTGGACAACGAT
CTCGTGGAGGCACAGGAGCTGAAGGAGATCGAAAAGGACATTCGGAAGGA
GGTCCAGGTGGGCGTCGCGTTCACCGACCGGTTGGCACTTAAGTTGTTCA
TTCTCAAAAAGCGCACGCCCACTCCATATTGTCCTTATTGATGCTTTCTG
TCGGTCGTGGCTTCTGCTGTGATTCAACTGATTTGGCGCGGAGCGAGCTC
GTTGCGCAGTGCGCTTTTGGTTTGTGCGTCTCAAGCTCGTTGAGATCGTA
GATATGAATTGAAAATGTGATCCTTCACGGCCAGTGGCGCACGAGGTTCT
CTTTCCTAGAGCATTGTGGTCTCGACACCTATCTTCTATCTCTCGCGACA
AACCTCTTCCCCTCGCGTGGGTTGCGTCCGGCAGGAGGCGCTCAAGAGAG
CGAAGGGAGGTACGGTGCCGCCCGAAGAGGAGCTCTACAGCAACATCTGG
GTTGCGGGCGAAAACTACGAGAAGCCCGTGATCCCCGGATTCGTCCGCCT
GCCCGACCGCGCCAAGAGCATCGGGAACATCATGGGCGACGTGGTGGTGT
AG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig11337:6816..10317+

>mRNA_A-nodosum_M_contig11337.1.1 ID=mRNA_A-nodosum_M_contig11337.1.1|Name=mRNA_A-nodosum_M_contig11337.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=996bp|location=Sequence derived from alignment at A-nodosum_M_contig11337:6816..10317+ (Ascophyllum nodosum dioecious)
ATGCCTACGGAGGCCGTCACCGACCGTGAGGAGCTCATGTCTTACTTCAA
GCTCATGTACACCATGCGACGGATGGAGATCACCTGCGACACCGAATACA
AGGACTCGTGGATCACGTCGTACCGATGCCACTGCGCGGCGCTGGCGCGA
GGGGGCACCGTAGAGGCCATTTTCGCGGAGCTGTTTGGTTTCAAGGAGGG
CATGTCTCGAGGGAAGGGCGGGTCGATGCACTTGTACAAAAAATCGCACA
ACTTCTTCGGGGGAGCGGGTATTGTGGGGGCGCAGGTGCCTCTTGGCACC
GGGTTGGCGTTCGCTGGCAAGTACACCACCCCGGCGGGCGAGGATACACC
TGTTGCCGTCGCCATGTACGGGGATGGCGCTGCCAACCAGGGTCAGATCT
GGGAATCGTCGAACATGGCATCCTTGTGGAAGCTGCCCATGATCTACTGT
ATCGAGAACAACCAGTACGGCATGGGCACATCCAAGGAGCGCTCGTCGTC
TAACTCCACCTACTACACCATGGGCAACCACATCCCCGGCATCAAGCTGG
ACGGCATGAACGTGCTCATGGTCGAGAAGGGCTTTGCCTTCTGCAAAGAG
TGGTGCGCTAAGGGCAACGGCCCTATTTACGTCGAGGTAGACACCTACAG
GTACCACGGGCACTCCATGTCCGACCCCGGGACCACGTACCGCAACCGCG
ACGAGATTGCGTCGATGCGTACGGCGCGCGATCCCGTTGAACTGGTCAAG
AACCTTCTCGTGGACAACGATCTCGTGGAGGCACAGGAGCTGAAGGAGAT
CGAAAAGGACATTCGGAAGGAGGTCCAGGAGGCGCTCAAGAGAGCGAAGG
GAGGTACGGTGCCGCCCGAAGAGGAGCTCTACAGCAACATCTGGGTTGCG
GGCGAAAACTACGAGAAGCCCGTGATCCCCGGATTCGTCCGCCTGCCCGA
CCGCGCCAAGAGCATCGGGAACATCATGGGCGACGTGGTGGTGTAG
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