mRNA_A-nodosum_M_contig11331.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig11331.1.1
Unique NamemRNA_A-nodosum_M_contig11331.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A183MAL2_9TREM (Uncharacterized protein n=2 Tax=Schistosoma margrebowiei TaxID=48269 RepID=A0A183MAL2_9TREM)

HSP 1 Score: 78.2 bits (191), Expect = 2.000e-16
Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 1
Query:   13 VVPTVASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
            V+    S++F    + G Y    G  +  F  +  A +  F RP++ LG+A++ S+C  G GGP+ W+L+  ++ VP+RLTY AYLVHP++ +++    Q+P+
Sbjct:    4 VIGVCLSSIFCVSTVYGLYGLLSGKVEP-FTTFGAATYTAFHRPIFILGIAIVVSMCALGCGGPIRWILTLSVFRVPSRLTYTAYLVHPIVVLFIALGSQNPI 105          
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A6A5DRJ9_SCHHA (NRF domain-containing protein n=1 Tax=Schistosoma haematobium TaxID=6185 RepID=A0A6A5DRJ9_SCHHA)

HSP 1 Score: 78.2 bits (191), Expect = 1.280e-14
Identity = 36/103 (34.95%), Postives = 61/103 (59.22%), Query Frame = 1
Query:   13 VVPTVASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
            V+    S++F    + G Y    G     F  +  A +  F RP++ LG+A++ S+C  G GGP+ W+L+  ++ VP+RLTY AYLVHP++ +++    Q+P+
Sbjct:  646 VISVCLSSIFCVSTVYGLYGLLSG-KVGPFTTFGAATYTAFHRPIFILGIAIVVSMCALGCGGPIRWILTLSVFRVPSRLTYTAYLVHPIVVLFIALGSQNPI 747          
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A3Q0KKR7_SCHMA (NRF domain-containing protein n=3 Tax=Schistosoma TaxID=6181 RepID=A0A3Q0KKR7_SCHMA)

HSP 1 Score: 77.8 bits (190), Expect = 1.740e-14
Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 1
Query:   31 SALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
            S++F    + G Y    G  +  F  +  A +  F RP++ LG+A++ S+C  G GGP+ W+L+  ++ VP+RLTY AYLVHP++ +++    Q+P+
Sbjct:  628 SSIFCVSTVYGLYGLLSGKVEP-FTTFGAATYTAFHRPIFILGIAIVVSMCALGCGGPIQWILTLSVFRVPSRLTYTAYLVHPIVILFIALGSQNPI 723          
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A4Z2DH11_SCHJA (Nose resistant to fluoxetine protein n=2 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2DH11_SCHJA)

HSP 1 Score: 76.6 bits (187), Expect = 4.430e-14
Identity = 37/97 (38.14%), Postives = 60/97 (61.86%), Query Frame = 1
Query:   31 SALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
            S++F    + G Y    G  +  F     A +  F RP++ LGVA++ S+C  G GGP++ +L+ P++ VPARLTY AYLVHP++ +++    Q+P+
Sbjct:  618 SSIFCVSTVYGLYGLLSGKVEP-FSTVGAAAYTAFHRPIFVLGVAIVVSMCALGCGGPIHSILTLPVFCVPARLTYTAYLVHPIVTMFIVLGSQNPL 713          
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A8K0K0T0_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0K0T0_LADFU)

HSP 1 Score: 72.8 bits (177), Expect = 1.500e-13
Identity = 34/99 (34.34%), Postives = 50/99 (50.51%), Query Frame = 1
Query:   25 VASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
            + +AL   L +  T+    G           A H   S   WGL +A +   C  GRGGPVNW+LS   +V  +RL++CAYL+HP++   +F     P+
Sbjct:   83 LVAALMWTLSMAVTFSLVYGLYGRNIGPLESAAHTALSHTTWGLAIAWIVLSCSTGRGGPVNWILSNRFFVPLSRLSFCAYLIHPLIMFAVFMHSDAPI 181          
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: UPI001BB24D8F (nose resistant to fluoxetine protein 6-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB24D8F)

HSP 1 Score: 72.0 bits (175), Expect = 1.860e-12
Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 1
Query:   67 YWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFAS 306
            Y AY G       +W   +++ F R  WG+G+A +   C  G GGP+  LL    W+  ARLTYCAYL+HP    W+FA+
Sbjct:  668 YGAY-GCLNRYIEQWESMIYLTFGRLAWGIGIAWIIFACLNGYGGPIGVLLDWSFWIPMARLTYCAYLLHPT---WIFAA 743          
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: UPI0015FF22FF (nose resistant to fluoxetine protein 6-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FF22FF)

HSP 1 Score: 70.9 bits (172), Expect = 4.640e-12
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 1
Query:   25 VASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQ 312
            VA+A  +A+ + G Y  Y GT         +A ++   R +WG+ +  M   CF G GG VN  LS  +WV  +RLTYCAYLVHPM+    F +R+
Sbjct:  504 VATATALAV-LYGLYGTYHGTVMTNSE---NAFYLSVHRAVWGMALGWMVLACFYGYGGLVNTFLSWELWVPLSRLTYCAYLVHPMVIYVAFYTRE 595          
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A6A4V5H8_AMPAM (Nose resistant to fluoxetine protein 6 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4V5H8_AMPAM)

HSP 1 Score: 70.9 bits (172), Expect = 4.730e-12
Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 1
Query:   43 MALPIMGTYWAYQGTDKARFPEWADALHIVFS---RPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
            +AL ++   W Y     +   EW  A+ + ++   RP WGL +A +   C  GRGGPVN LLS P+W   +RLTY  YL    L +W  +  + PV
Sbjct:  662 VALLVVLGMWKYNSEPDS---EWTPAVAVSYAALHRPAWGLCIAWVIWACAKGRGGPVNALLSHPVWWPLSRLTYATYLTSIQLMVWYVSQAREPV 754          
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: UPI0009E27B97 (nose resistant to fluoxetine protein 6-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E27B97)

HSP 1 Score: 67.8 bits (164), Expect = 6.090e-12
Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 1
Query:   34 ALFMALPIM-GTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQ 312
            A+ +AL  + G Y  ++  +   F    +  + +FSR  W L +A +   C  G GG VN +LS   W+  +RLTYCAYL+HP++ + LF+S +
Sbjct:   50 AIILALSTLYGEYQVFRTNNPQPFSRAENITYGMFSRFAWSLALAWVIFACHRGLGGLVNRILSARFWIPLSRLTYCAYLIHPVVILTLFSSME 143          
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: C3YTJ1_BRAFL (Acyl_transf_3 domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YTJ1_BRAFL)

HSP 1 Score: 70.5 bits (171), Expect = 6.230e-12
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 1
Query:   25 VASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQ 312
            VA+A  +A+ + G Y  Y GT         +A ++   R +WG+ +  M   CF G GG VN  LS  +WV  +RLTYCAYLVHPM+    F +R+
Sbjct:  405 VATATALAV-LYGLYGTYHGTVMTNSE---NAFYLSVHRAVWGMALGWMVLACFYGYGGLVNSFLSWELWVPLSRLTYCAYLVHPMVIYVAFYTRE 496          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A183MAL2_9TREM2.000e-1634.95Uncharacterized protein n=2 Tax=Schistosoma margre... [more]
A0A6A5DRJ9_SCHHA1.280e-1434.95NRF domain-containing protein n=1 Tax=Schistosoma ... [more]
A0A3Q0KKR7_SCHMA1.740e-1436.08NRF domain-containing protein n=3 Tax=Schistosoma ... [more]
A0A4Z2DH11_SCHJA4.430e-1438.14Nose resistant to fluoxetine protein n=2 Tax=Schis... [more]
A0A8K0K0T0_LADFU1.500e-1334.34Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
UPI001BB24D8F1.860e-1241.25nose resistant to fluoxetine protein 6-like n=1 Ta... [more]
UPI0015FF22FF4.640e-1240.63nose resistant to fluoxetine protein 6-like n=1 Ta... [more]
A0A6A4V5H8_AMPAM4.730e-1237.50Nose resistant to fluoxetine protein 6 n=1 Tax=Amp... [more]
UPI0009E27B976.090e-1236.17nose resistant to fluoxetine protein 6-like n=1 Ta... [more]
C3YTJ1_BRAFL6.230e-1240.63Acyl_transf_3 domain-containing protein n=1 Tax=Br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11331contigA-nodosum_M_contig11331:8916..9236 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G7D7
PFAMsAcyl_transf_3
Model size321
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons1
Evalue7.18e-32
EggNOG OGsKOG3700@1|root,KOG3700@2759|Eukaryota
Descriptiontransferase activity, transferring acyl groups
Cds size321
COG categoryV
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866539.3961458-CDS-A-nodosum_M_contig11331:8915..92361680866539.3961458-CDS-A-nodosum_M_contig11331:8915..9236Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11331 8916..9236 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11331.1.1prot_A-nodosum_M_contig11331.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig11331 8916..9236 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig11331.1.1

>prot_A-nodosum_M_contig11331.1.1 ID=prot_A-nodosum_M_contig11331.1.1|Name=mRNA_A-nodosum_M_contig11331.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=107bp
MKDTVVPTVASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMW
GLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLF
ASRQHPV
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mRNA from alignment at A-nodosum_M_contig11331:8916..9236-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig11331.1.1 ID=mRNA_A-nodosum_M_contig11331.1.1|Name=mRNA_A-nodosum_M_contig11331.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=321bp|location=Sequence derived from alignment at A-nodosum_M_contig11331:8916..9236- (Ascophyllum nodosum dioecious)
ATGAAGGATACAGTAGTCCCGACCGTGGCTTCTGCCCTGTTCATGGCCTT GCCGATCATGGGGACGTACTGGGCCTACCAGGGCACCGACAAGGCGCGCT TTCCCGAGTGGGCGGATGCTCTACACATTGTCTTCTCTCGGCCCATGTGG GGGTTGGGCGTAGCTCTGATGTGCTCGCTATGTTTCGCCGGGCGAGGCGG TCCCGTGAACTGGCTGCTATCGCGGCCGATTTGGGTGGTACCCGCCAGGC TTACCTACTGCGCCTATCTGGTGCACCCGATGCTGTGGATTTGGTTATTC GCCTCTCGGCAGCATCCGGTA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig11331:8916..9236-

>mRNA_A-nodosum_M_contig11331.1.1 ID=mRNA_A-nodosum_M_contig11331.1.1|Name=mRNA_A-nodosum_M_contig11331.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=321bp|location=Sequence derived from alignment at A-nodosum_M_contig11331:8916..9236- (Ascophyllum nodosum dioecious)
ATGAAGGATACAGTAGTCCCGACCGTGGCTTCTGCCCTGTTCATGGCCTT
GCCGATCATGGGGACGTACTGGGCCTACCAGGGCACCGACAAGGCGCGCT
TTCCCGAGTGGGCGGATGCTCTACACATTGTCTTCTCTCGGCCCATGTGG
GGGTTGGGCGTAGCTCTGATGTGCTCGCTATGTTTCGCCGGGCGAGGCGG
TCCCGTGAACTGGCTGCTATCGCGGCCGATTTGGGTGGTACCCGCCAGGC
TTACCTACTGCGCCTATCTGGTGCACCCGATGCTGTGGATTTGGTTATTC
GCCTCTCGGCAGCATCCGGTA
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