mRNA_A-nodosum_M_contig11331.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A183MAL2_9TREM (Uncharacterized protein n=2 Tax=Schistosoma margrebowiei TaxID=48269 RepID=A0A183MAL2_9TREM) HSP 1 Score: 78.2 bits (191), Expect = 2.000e-16 Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 13 VVPTVASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
V+ S++F + G Y G + F + A + F RP++ LG+A++ S+C G GGP+ W+L+ ++ VP+RLTY AYLVHP++ +++ Q+P+
Sbjct: 4 VIGVCLSSIFCVSTVYGLYGLLSGKVEP-FTTFGAATYTAFHRPIFILGIAIVVSMCALGCGGPIRWILTLSVFRVPSRLTYTAYLVHPIVVLFIALGSQNPI 105
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A6A5DRJ9_SCHHA (NRF domain-containing protein n=1 Tax=Schistosoma haematobium TaxID=6185 RepID=A0A6A5DRJ9_SCHHA) HSP 1 Score: 78.2 bits (191), Expect = 1.280e-14 Identity = 36/103 (34.95%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 13 VVPTVASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
V+ S++F + G Y G F + A + F RP++ LG+A++ S+C G GGP+ W+L+ ++ VP+RLTY AYLVHP++ +++ Q+P+
Sbjct: 646 VISVCLSSIFCVSTVYGLYGLLSG-KVGPFTTFGAATYTAFHRPIFILGIAIVVSMCALGCGGPIRWILTLSVFRVPSRLTYTAYLVHPIVVLFIALGSQNPI 747
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A3Q0KKR7_SCHMA (NRF domain-containing protein n=3 Tax=Schistosoma TaxID=6181 RepID=A0A3Q0KKR7_SCHMA) HSP 1 Score: 77.8 bits (190), Expect = 1.740e-14 Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 31 SALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
S++F + G Y G + F + A + F RP++ LG+A++ S+C G GGP+ W+L+ ++ VP+RLTY AYLVHP++ +++ Q+P+
Sbjct: 628 SSIFCVSTVYGLYGLLSGKVEP-FTTFGAATYTAFHRPIFILGIAIVVSMCALGCGGPIQWILTLSVFRVPSRLTYTAYLVHPIVILFIALGSQNPI 723
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A4Z2DH11_SCHJA (Nose resistant to fluoxetine protein n=2 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2DH11_SCHJA) HSP 1 Score: 76.6 bits (187), Expect = 4.430e-14 Identity = 37/97 (38.14%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 31 SALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
S++F + G Y G + F A + F RP++ LGVA++ S+C G GGP++ +L+ P++ VPARLTY AYLVHP++ +++ Q+P+
Sbjct: 618 SSIFCVSTVYGLYGLLSGKVEP-FSTVGAAAYTAFHRPIFVLGVAIVVSMCALGCGGPIHSILTLPVFCVPARLTYTAYLVHPIVTMFIVLGSQNPL 713
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A8K0K0T0_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0K0T0_LADFU) HSP 1 Score: 72.8 bits (177), Expect = 1.500e-13 Identity = 34/99 (34.34%), Postives = 50/99 (50.51%), Query Frame = 1
Query: 25 VASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
+ +AL L + T+ G A H S WGL +A + C GRGGPVNW+LS +V +RL++CAYL+HP++ +F P+
Sbjct: 83 LVAALMWTLSMAVTFSLVYGLYGRNIGPLESAAHTALSHTTWGLAIAWIVLSCSTGRGGPVNWILSNRFFVPLSRLSFCAYLIHPLIMFAVFMHSDAPI 181
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: UPI001BB24D8F (nose resistant to fluoxetine protein 6-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB24D8F) HSP 1 Score: 72.0 bits (175), Expect = 1.860e-12 Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 67 YWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFAS 306
Y AY G +W +++ F R WG+G+A + C G GGP+ LL W+ ARLTYCAYL+HP W+FA+
Sbjct: 668 YGAY-GCLNRYIEQWESMIYLTFGRLAWGIGIAWIIFACLNGYGGPIGVLLDWSFWIPMARLTYCAYLLHPT---WIFAA 743
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: UPI0015FF22FF (nose resistant to fluoxetine protein 6-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FF22FF) HSP 1 Score: 70.9 bits (172), Expect = 4.640e-12 Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 25 VASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQ 312
VA+A +A+ + G Y Y GT +A ++ R +WG+ + M CF G GG VN LS +WV +RLTYCAYLVHPM+ F +R+
Sbjct: 504 VATATALAV-LYGLYGTYHGTVMTNSE---NAFYLSVHRAVWGMALGWMVLACFYGYGGLVNTFLSWELWVPLSRLTYCAYLVHPMVIYVAFYTRE 595
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: A0A6A4V5H8_AMPAM (Nose resistant to fluoxetine protein 6 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4V5H8_AMPAM) HSP 1 Score: 70.9 bits (172), Expect = 4.730e-12 Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 43 MALPIMGTYWAYQGTDKARFPEWADALHIVFS---RPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQHPV 321
+AL ++ W Y + EW A+ + ++ RP WGL +A + C GRGGPVN LLS P+W +RLTY YL L +W + + PV
Sbjct: 662 VALLVVLGMWKYNSEPDS---EWTPAVAVSYAALHRPAWGLCIAWVIWACAKGRGGPVNALLSHPVWWPLSRLTYATYLTSIQLMVWYVSQAREPV 754
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: UPI0009E27B97 (nose resistant to fluoxetine protein 6-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E27B97) HSP 1 Score: 67.8 bits (164), Expect = 6.090e-12 Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 1
Query: 34 ALFMALPIM-GTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQ 312
A+ +AL + G Y ++ + F + + +FSR W L +A + C G GG VN +LS W+ +RLTYCAYL+HP++ + LF+S +
Sbjct: 50 AIILALSTLYGEYQVFRTNNPQPFSRAENITYGMFSRFAWSLALAWVIFACHRGLGGLVNRILSARFWIPLSRLTYCAYLIHPVVILTLFSSME 143
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Match: C3YTJ1_BRAFL (Acyl_transf_3 domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YTJ1_BRAFL) HSP 1 Score: 70.5 bits (171), Expect = 6.230e-12 Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 25 VASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWGLGVALMCSLCFAGRGGPVNWLLSRPIWVVPARLTYCAYLVHPMLWIWLFASRQ 312
VA+A +A+ + G Y Y GT +A ++ R +WG+ + M CF G GG VN LS +WV +RLTYCAYLVHPM+ F +R+
Sbjct: 405 VATATALAV-LYGLYGTYHGTVMTNSE---NAFYLSVHRAVWGMALGWMVLACFYGYGGLVNSFLSWELWVPLSRLTYCAYLVHPMVIYVAFYTRE 496 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11331.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11331.1.1 >prot_A-nodosum_M_contig11331.1.1 ID=prot_A-nodosum_M_contig11331.1.1|Name=mRNA_A-nodosum_M_contig11331.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=107bp MKDTVVPTVASALFMALPIMGTYWAYQGTDKARFPEWADALHIVFSRPMWback to top mRNA from alignment at A-nodosum_M_contig11331:8916..9236- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11331.1.1 ID=mRNA_A-nodosum_M_contig11331.1.1|Name=mRNA_A-nodosum_M_contig11331.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=321bp|location=Sequence derived from alignment at A-nodosum_M_contig11331:8916..9236- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11331:8916..9236- >mRNA_A-nodosum_M_contig11331.1.1 ID=mRNA_A-nodosum_M_contig11331.1.1|Name=mRNA_A-nodosum_M_contig11331.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=321bp|location=Sequence derived from alignment at A-nodosum_M_contig11331:8916..9236- (Ascophyllum nodosum dioecious)back to top |