mRNA_A-nodosum_M_contig1131.6.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: D8LR67_ECTSI (Uroporphyrinogen-III C-methyltransferase, putative chloroplast n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR67_ECTSI) HSP 1 Score: 477 bits (1227), Expect = 3.250e-158 Identity = 244/300 (81.33%), Postives = 264/300 (88.00%), Query Frame = 3
Query: 378 LASALSEGHGYPDD-MDGWSPIDGIETGTVSLVGSGPGDPDLLTIAGLRELQSADLVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSFPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVLHGSKQGLISDAAKGMFFGVDAAKVARAGKTAAEKMDKLNGG 1274
LA + G P D DGW P DG+E GT SLVGSGPGDPDLLT+AGLRELQSADLVI+DRLVSKEI G+V+GELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDP+IFGRGGEEVL MR+LGVEP VVPGISSVFSAPLLGG+PVTHRGVATQV LGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELC DLVRRS+P D P+AI+ENASTPRQRVI GTVDTIS++ARGL VKAPATIVVGEVV VLHG +QGL+SDAA+GMF GVD +VA A + AEK + L G
Sbjct: 91 LAGSAPAGGVVPTDHTDGWEPRDGVEIGTCSLVGSGPGDPDLLTVAGLRELQSADLVIADRLVSKEILGLVEGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPFIFGRGGEEVLVMRELGVEPKVVPGISSVFSAPLLGGVPVTHRGVATQVTLGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCADLVRRSYPTDTPVAIIENASTPRQRVIKGTVDTISKVARGLKVKAPATIVVGEVVSVLHGPEQGLLSDAAEGMFAGVDKERVASAAERVAEKKEGLFSG 390
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA) HSP 1 Score: 350 bits (897), Expect = 1.150e-106 Identity = 169/245 (68.98%), Postives = 208/245 (84.90%), Query Frame = 3
Query: 453 TGTVSLVGSGPGDPDLLTIAGLRELQSADLVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSFPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVLHGSKQGLISDAA 1187
+GT++LVG+GPGDPDLLT+ +R L +ADLVI+DRLVSKEI +V+G+LRVARK+PGCAE+AQ+EIYRW++EG+ AGK+VVRLKIGDP++FGRGGEE+LE RK G+E VVPGISSVF APLL GIPVTHRGVA QV LGTGY +DY PDI DYHP++TAVFLMA+GRL+ELC DL+RR +P P+AIVE+ASTP QR + TV+TI+ +A V+APATI+VG+VV+VLHG QGLI D A
Sbjct: 299 SGTLTLVGAGPGDPDLLTVKAVRVLATADLVIADRLVSKEILDLVEGDLRVARKHPGCAEEAQQEIYRWVKEGVDAGKNVVRLKIGDPFVFGRGGEEILEARKWGLECSVVPGISSVFGAPLLAGIPVTHRGVANQVVLGTGYAKDYGTPDISDYHPEQTAVFLMAVGRLKELCADLMRRGYPAATPVAIVESASTPTQRTVKATVETITAVATEHAVRAPATIIVGDVVRVLHGDAQGLIQDVA 543
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: A0A6T5QQD2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QQD2_HETAK) HSP 1 Score: 308 bits (790), Expect = 5.050e-94 Identity = 146/243 (60.08%), Postives = 186/243 (76.54%), Query Frame = 3
Query: 450 ETGTVSLVGSGPGDPDLLTIAGLRELQSADLVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSFPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVLHGSKQGLIS 1178
+ G +SLVG+GPGDP+LLT+A +R LQ ADLV+SDRLVS+EI VK EL++ARK PGCAE+AQ EIY W +EGL+AGK VVRLKIGDP IFGRGGEE+L R+ G +P +V G+SS FSAPLLG IP+THRG A Q+ +GTGYGQ+ + I YHP++TAVFLMA+GRL LC DL +P DCP+AI+E ASTP QR++ G + +I +A VK P+ +V G VV LHG+K+GL++
Sbjct: 84 KAGHISLVGAGPGDPELLTVAAIRRLQGADLVVSDRLVSQEILDFVKCELKIARKRPGCAEEAQEEIYDWCKEGLAAGKRVVRLKIGDPLIFGRGGEEILRFREWGYKPELVAGVSSAFSAPLLGNIPLTHRGFANQLVIGTGYGQNCTKTGITPYHPERTAVFLMAVGRLPTLCADLAAEGYPADCPVAIIEKASTPEQRLVLGKISSIVALAEEHRVKPPSIVVFGAVVAALHGAKEGLVA 326
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: A0A7S2LDV1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LDV1_9STRA) HSP 1 Score: 298 bits (764), Expect = 1.910e-90 Identity = 150/285 (52.63%), Postives = 204/285 (71.58%), Query Frame = 3
Query: 348 FTWTPRDSQALASALSEGHGYPDDMDGWSPIDGIETGTVSLVGSGPGDPDLLTIAGLRELQSAD-LVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVR-RSFPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVLHGSKQGLISDAAKGM 1196
F + P ++ A + +S G + ++ + G VS+VGSGPGDPDLLTIA + ++ D L+I+DRLVS EI + KGE+R ARK PGCA++AQ+EIY W REGL GKHVVRLKIGDP++FGRGGEEVLE RK+GVEP V+PG+S+ F+APLLGGIPVTHRG++ QV + TGYG++ PD+ YH ++T VFLMA+GRL ELC++L ++PRD P+A+VE A P QR + G ++TI++ ++K P+TIVVGEVV VL G + + +G+
Sbjct: 40 FLYLPDEAAAGKNNVSNGKANDETF----LVNNGKMGRVSMVGSGPGDPDLLTIAAAKVIEDPDALIIADRLVSPEIIALCKGEVRTARKLPGCADKAQQEIYDWCREGLMDGKHVVRLKIGDPFVFGRGGEEVLEFRKMGVEPKVIPGVSAAFAAPLLGGIPVTHRGISNQVVMCTGYGRNGTSPDLIQYHKEQTVVFLMAVGRLRELCDNLCNLANYPRDTPVAVVEKAGCPEQRTVVGDLNTIADYCIRYDIKPPSTIVVGEVVDVLLNEGVGSMEERVQGL 320
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: A0A7S4AWV6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AWV6_9STRA) HSP 1 Score: 293 bits (749), Expect = 6.150e-88 Identity = 151/267 (56.55%), Postives = 197/267 (73.78%), Query Frame = 3
Query: 372 QALASALSEGHGYPD--DMDGWS--PIDGIETG-TVSLVGSGPGDPDLLTIAGLRELQSAD-LVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRS-FPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVL 1151
+ + S+ G PD +D +S P++ +E G ++LVGSGPGDPDLLT+ + LQ D LVI+DRLVS+EI MV GE++VARK PGCAE AQ EIY W +GLSAGKHV+RLKIGDPY+FGRGGEEVL+ RK GVE VVPG+S+ FSAPLL IPVTHRG + QV + TGYG++ + PD+ YH ++T VFLMA+GRL LCE L++ + +P+D P+ I+E A P QR + G + TI++IA N++AP+TIVVG+VV VL
Sbjct: 71 KVIESSKENEWGIPDRDTLDPFSATPLEQLENGGRITLVGSGPGDPDLLTVKAYKLLQDPDALVIADRLVSQEILDMVGGEIKVARKLPGCAENAQAEIYWWTHQGLSAGKHVIRLKIGDPYVFGRGGEEVLQFRKFGVESKVVPGVSAAFSAPLLANIPVTHRGYSNQVVMCTGYGREGSSPDLIQYHEEQTIVFLMAVGRLRVLCERLIKLAGYPKDTPVGIIERAGCPNQRTVIGNMQTIADIAEKHNIQAPSTIVVGKVVNVL 337
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: A0A1E7FE26_9STRA (Uroporphyrin-III C-m n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE26_9STRA) HSP 1 Score: 293 bits (749), Expect = 7.200e-88 Identity = 142/234 (60.68%), Postives = 182/234 (77.78%), Query Frame = 3
Query: 456 GTVSLVGSGPGDPDLLTIAGLRELQSAD-LVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRS-FPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVL 1151
G ++LVGSGPGDPDLLT+ + LQ D L+ISDRLVS+EI +VKGE+++ARK PGCAE AQ EIY W EGL+AGKHV+RLKIGDP++FGRGGEEV++ RK GVE VVPG+SS FSAPLL IPVTHRGV+ QV + TGYG++ PD+ YH ++T VFLMA+GRL +LC+ LV + +P+D P+ I+E A P QR + G + TI++IA N++AP+TIVVG+VV VL
Sbjct: 107 GRITLVGSGPGDPDLLTVKAYKLLQDPDALIISDRLVSQEILDIVKGEIKIARKMPGCAEFAQEEIYFWTHEGLAAGKHVIRLKIGDPFVFGRGGEEVIQFRKFGVESKVVPGVSSAFSAPLLANIPVTHRGVSNQVVMCTGYGREGTSPDLIQYHEEQTIVFLMAVGRLRQLCDRLVNLAGYPKDTPVGIIERAGCPNQRTVVGNMQTIADIAEKYNIQAPSTIVVGKVVDVL 340
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: A0A7S0HSB0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HSB0_9CRYP) HSP 1 Score: 288 bits (736), Expect = 7.440e-86 Identity = 134/232 (57.76%), Postives = 177/232 (76.29%), Query Frame = 3
Query: 456 GTVSLVGSGPGDPDLLTIAGLRELQSADLVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSFPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVL 1151
G+++LVG+GPGDPDLLT+ + +Q+AD+VI+DRLVSKEI ++K EL++A+KYPGCA AQ EIYRW EGL+ GK++VRLKIGDP++FGRGGEEVLE+RK GVE V+PGISS + PL GIPVTHRGVA +V TG G++ + PD+ YHP++T VFLMA+GRLE L +DL R +P+ P+ I+E A+TP +R I GT+ I +A ++ P+ IVVGE V VL
Sbjct: 105 GSITLVGAGPGDPDLLTLGAFKAIQAADVVIADRLVSKEILSLIKCELKIAQKYPGCAHDAQNEIYRWCAEGLAEGKNIVRLKIGDPFVFGRGGEEVLELRKFGVEAKVIPGISSALAGPLAAGIPVTHRGVANRVVFCTGMGKEESVPDVPAYHPEQTCVFLMAVGRLEALTDDLTREGYPQSTPVGIIERATTPHERTIRGTISDIVNLAHEEQIRPPSVIVVGEAVNVL 336
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: L1J6F0_GUITC (TP_methylase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6F0_GUITC) HSP 1 Score: 283 bits (724), Expect = 2.310e-85 Identity = 137/237 (57.81%), Postives = 178/237 (75.11%), Query Frame = 3
Query: 456 GTVSLVGSGPGDPDLLTIAGLRELQSADLVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRSFPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVLHGSKQ 1166
G+++LVG+GPGDPDLLT+ L+ + +ADLVI+DRLVSKEI ++K EL++A+KYPGCA AQ EIYRW EGL GK +VRLKIGDP++FGRGGEEVLE+RK GVE V+PGISS + PL GIPVTHRGVA +V TG G++ + PDI YHP++T VFLMA+GRL+ L +DL + +P P+ I+E A+TP +R I GT++ I +A ++ P+ IVVGE V VL SKQ
Sbjct: 16 GSITLVGAGPGDPDLLTLGALKAIHAADLVIADRLVSKEILALIKSELKIAQKYPGCAHDAQNEIYRWCAEGLVEGKKIVRLKIGDPFVFGRGGEEVLELRKFGVEAKVIPGISSALAGPLAAGIPVTHRGVANRVVFCTGMGKEESIPDIPAYHPEQTCVFLMAVGRLKALTDDLTKGGYPSTTPVGIIERATTPHERTIRGTIEDIVILASEEKIRPPSVIVVGEAVNVL--SKQ 250
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: A0A7S1CYT5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYT5_CYCTE) HSP 1 Score: 284 bits (727), Expect = 4.720e-85 Identity = 138/234 (58.97%), Postives = 177/234 (75.64%), Query Frame = 3
Query: 456 GTVSLVGSGPGDPDLLTIAGLRELQSAD-LVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVR-RSFPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVL 1151
G V+L+GSGPGDPDLLT+A R L LVI+DRLVSKEI ++ GE+++ARK PGCAE AQ EIY W +G+ GKHVVRLKIGDP++FGRGGEEVL+ R+ GVEP V+PG+S+ FSAPLLG IPVTHRGV+ QV + TGYG++ PD+ YH ++T VFLMA+GRL ELC+ L+ ++P P+ IVE A P QR + G ++TI++IA +K P+TIVVG+VV VL
Sbjct: 80 GKVTLLGSGPGDPDLLTVAAYRILSDPKTLVIADRLVSKEILDVIAGEIKIARKLPGCAELAQEEIYWWTHQGIQEGKHVVRLKIGDPFVFGRGGEEVLKFREFGVEPTVIPGVSAAFSAPLLGSIPVTHRGVSNQVVMCTGYGREGTSPDLIQYHKEQTVVFLMAVGRLRELCQRLISLANYPAKTPVGIVERAGCPNQRTVVGNLETIADIAERFQIKPPSTIVVGDVVNVL 313
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Match: B8C0W2_THAPS (TP_methylase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0W2_THAPS) HSP 1 Score: 280 bits (715), Expect = 8.890e-85 Identity = 136/233 (58.37%), Postives = 180/233 (77.25%), Query Frame = 3
Query: 459 TVSLVGSGPGDPDLLTIAGLRELQS-ADLVISDRLVSKEIQGMVKGELRVARKYPGCAEQAQREIYRWMREGLSAGKHVVRLKIGDPYIFGRGGEEVLEMRKLGVEPHVVPGISSVFSAPLLGGIPVTHRGVATQVALGTGYGQDYARPDICDYHPQKTAVFLMAIGRLEELCEDLVRRS-FPRDCPIAIVENASTPRQRVIAGTVDTISEIARGLNVKAPATIVVGEVVKVL 1151
T++L+GSGPG PDLLT++ R L ++LVI DRLVS EI +++GE+R+A K+PGC E AQREIY W +GL G+ VVRLKIGDP++FGRGGEEVLE RK GVEP V+PG+S+ FSAPLL IPVTHRG++ QV + TGYG++ P++ YH ++T VFLMA+GRL LCE+LV+ + +P + P+ IVE A P QRV+ GT++TI+++A +VK P+TIVVGEVV VL
Sbjct: 1 TITLLGSGPGSPDLLTLSAYRILSDPSNLVIVDRLVSDEIVELIQGEVRIANKHPGCQESAQREIYEWCVQGLRDGRKVVRLKIGDPFVFGRGGEEVLEFRKFGVEPTVIPGVSAAFSAPLLANIPVTHRGISNQVVMCTGYGRNNTSPELIQYHKEQTVVFLMAVGRLRTLCENLVKMAGYPIETPVGIVERAGCPDQRVVVGTMETIADLAEEYDVKPPSTIVVGEVVNVL 233 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1131.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1131.6.1 >prot_A-nodosum_M_contig1131.6.1 ID=prot_A-nodosum_M_contig1131.6.1|Name=mRNA_A-nodosum_M_contig1131.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=399bp MAGSSRRRSTRSLIALGLALSADSRGAVAFVHSSAFSLHQGSAPSSSGSRback to top mRNA from alignment at A-nodosum_M_contig1131:56414..68125+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1131.6.1 ID=mRNA_A-nodosum_M_contig1131.6.1|Name=mRNA_A-nodosum_M_contig1131.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11712bp|location=Sequence derived from alignment at A-nodosum_M_contig1131:56414..68125+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1131:56414..68125+ >mRNA_A-nodosum_M_contig1131.6.1 ID=mRNA_A-nodosum_M_contig1131.6.1|Name=mRNA_A-nodosum_M_contig1131.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1197bp|location=Sequence derived from alignment at A-nodosum_M_contig1131:56414..68125+ (Ascophyllum nodosum dioecious)back to top |