mRNA_A-nodosum_M_contig1130.1.7 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: D8LBK0_ECTSI (Bromodomain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK0_ECTSI) HSP 1 Score: 1680 bits (4351), Expect = 0.000e+0 Identity = 1264/3195 (39.56%), Postives = 1489/3195 (46.60%), Query Frame = 3
Query: 312 MASKRTFDGRLHTHEGGGRGKASNCFKRPRRTAS-DPKERVRAHAEAKMSEVLSSLMKHKHAGLFLTPVDPSTAPGYENYVRTPMDLGTIAKKLKAGGFAGDIRAFTAQVRLVFANCLAYNPPGDWARAWGESCGGAFEAMYNAKLAPLLA-ESEMEEESPDAEG-----SQDDVGARG----AKSKKLKVKLK--KGGAGMGSGHAAMRSSKGCSLPRGKQSAQALDADTSXXXXXXXXXXXXXXXXXXXXXXXPPPKKQRAASTGMRVGANVKDGRP---GG--KALPKIRITFNAIGAPKIASPRAGTLPSIS-----------------GPTASPKTRKATIKIPPLRISPPGAAQQGDGARVNASGRRTRSVGGDLDGGHHGAGVLKLPPRARSRASSPASTSLGRKRAEFGVGGEGDSVEEDEGAERDDDMNEQEKEVSTEDEELVRKNYVKQAKRLFRKTTFPFRSGPYEVTSFGLISVRPEFHYEDFIFPPGFRCTHSRFLRALSKQYPGRRLVVRCDSSVVERDGSPRFHVEHCGQLLAEATSGLEAWHAAMQLDRALARRIVFRLVRCKAVLNRLCCSSDIMAFLEAVRPEEVPTYHSKILRPMHMRVVKERLARGGYLNEFAFASDIRLAWSNAKLFNREGSDLWMAADRLSSEFESLFCAWVINPPDGFGRGTQGNAPAQGPWDDWQHLRYFDPFDDCKGCSKASKSTTKPEAGGIDVEGADGAMGA---PELVCSSCEDGWHAACLG----------AAAGAAATTASLEGRPFMCPRCTAWANAGGTEGLRGMA---RELTPPPVGAGSQARADTVAVVPWTPQFYPHSSLPAGFQLRDDPPGPSATATTTAPTPGAEVAGLEAVAGSSASGQAFLTPVGTVVVGLAAAETYAKAYQARVTSDQKAKGGAKKRDVVFTMPGQEGEDSSYYLVVAGMDRVAGSVDPAESGAGLGPDGHFGLSVPEIKIRIEGLPSADQCERYVFKGAARQQKDAEIAARQRSEGDEALQAVRSRLRSRLAEERWYWVRRRQHAGEERNLVSRVDTHAAAMDQAVERRRKDALAGIEAASVPESSMELVPPTLGDPKPLFSRDLALSSRTVAVEQALMAWNFLSSFRDLLGFVLPPARRMIDALTPPKGKAIAIPSPSELTFSETGMVLTKLLLVEVHDILRRNMSKKLVDEVLAQSRPLNLLTWPEVAGDALVALCNHRAHPEMRTSELAALLSSRPAGWLARCGDLVAIVISQPLAAAFVRPVDPALVPGYAEVVLKPMDLSTVRRRLWSRRYQWHQQVMDDLRLVWSNAKVFNQENTDLWHAADCLEILTESLYEAWVLQPERRRDAESMREAGLGGMDDSSAAPGSEPKPESAEEGTGDATKGGVEVKQELAPPEPAVADAAAAEASVKSELAVEQPRQXXXXXXXXXXXXXXXXXXXXXXXXXXSGATGLPVVVNGVDAVQEDXXXXXXXXXXXXXXXXAAVAVFRRGRLPLDPATVHPSFAGRRTLPRHESPASGRSYGLWDPQSVHPAYFGHLRHDGEASGAAGIEGWTGAADGGAMDRALRVLRGATDSAAAGGEDIGRGDLAGVVRWSPEQRATVLGLLCEEAAMTGAAVEHVQELLKKEAAVTQAAAGEIGGGGADGSASDELD-------EP-FEAPGDDEAAVPEMELVPAD-DNVATALAAGGVGRA---CPLCGGIEKSGGSD------LPGA------------------SGDSWVLVPPALKALPAKLLPRFLDLQRGQA-DVVATSPAEGVEVLSSSSRATWLWHLYRSRLASEDNRGVGRKESAKTSGASDDSGESDDSDGVAGDNGKGTPQRQREDREVVA-------------------APETPSAVPLAPP-RMDDNPFCARVAAHAGCVRKLWRARYLALREERRLRRREERTFAHPSFIFAAAGNRYDSYGRHRYSPPPAYGQWDVGAYTLQQQHLQPSQGVQTGQYPGQAFAGAGSPASHVGAPVPLAIXXXXXXXXXXXPTTGVHPAAAVAGATHPLPASARVAAPASVLRQGALTASDQATVAAAAASQVLGTTGGVPRPAARDSNSDGAQGNGNSNDAASATRAVGATAVGAPSTQAVAVMSMPITPVAA------GHVSAEADTDSDMDEEEFAKEMQANLKGRDYSRNRPLGRDRFGNEYWRMFGDKHMVLVRRHGCWWGAYEGSEKIQELVRSLDVSTDGERHLRNRLHKAVDVWGVSERLGAYLRTKRAAKGRPETSAVAWGSVSRAVDGVGGVDDGGSGGTVASRKGKTAAGSSFLDERRREEADRIRGNLERASKPALWKRQHQVRETWLEGEMHELEEFLPVQAAGSGGTSGDFLFVQASVRQQRLFARALELRLGEYLETYDDERDSAIIEAYRAGDLEQLRVEKVRLKVELGDDSADNRDSQGWVRNTLPAAMREIAAETRALRLLHPPDLRTPAQKRKDMDAFAAGATSVASAAXXXXXXXVASERIAAREQARAALASAGAGAWHGSIPSADAAALGGPDVKLEGGGSEEAAGQAGTMVPAGAMATVASETSASSRLVNSSISSVRLEVAKDQGDGPASLGKRPESASLPGFDEDNPSAERSYWEPSVAGVGLVSAEMVKLKVEMLAVALCLPQRWELLH---SAPSRGRARGRPRQRHIAENAALVAPAPVAQELVPVAAVAVPEAAAGSIKRAEPASLPPVHFFAPSRGIAPELTAALKEAVEQQQTVYDEVEQ------------------DGTEAEDHIDIGMDDNSTAPVFDNGTPTPAAMKVDPSAGAVVGDTGNPAVETLPGSPDPXXXXXXXXXXXXXXXXXXXXXXXPVPDQPFVRKTQGKWLSVESSSDDEDFQDDDCAMAEVETTVNQAHASAQKAEAXXXXXXAGKPESLAIGPPVTADATPAFEGASPAAVAEGDEVWVTNEAATYHVAKAPGLSVAPPTAVHASAAVSSLAEVRTANETAPVEMAIDHAPLPSAPLPQAVNHVAIEGDGRPKIEPTPQQSELETPSDDAAVRPKRQEETPGVEISSMALDLDDWRERVRRAQTTEELASLALELDYALPREEGWLEPWYKTDSFPEPRLGGGSSLAAVATRVFALDRALRWNMIPRPCKGGSRLPGDLPRAWVFSYQCPLAPLCIRPCFHKGKCRFHRSGISRVDDPMVVP 9491
MASKR + + GG + KRPRRTA+ DP+ER RA AEA+M++V+SSLMKHKHAGLFL PVDP TAP YE YV+TPMDLGTI +KL+AGGFAGDI F AQVRLVFANCLAYNPPGDWARAWGESCGGAFEAMYNAKLAPLLA +S+M D EG + G RG K KKLKV+LK +GGA GSG SS + G + A A PP KK GG + LPKIRITFNA G PKIA P AG S S ++ ++ + EE RK +KQA+RL RKT PFR GPYEV SFG++S RP FH + F+FPPG+RCTHSRF+R SKQYPG++LVVRCDS VVE + SP F VEHCGQLLAEA SG+EAWHA +QLD ALARR VFRLVRCK+VLNRLCC+ D++AFLE+V P EVP YH+KI RP+HMR+V +RL RGGY+NEFAFASD+RLAWSNAKLFNREGS+LW+AADRLS EFE+LFC WVINPPDG+GRGTQGNAPA+GPWDDWQ LRYFD C+GC+KA+ A E A+ A PELVCS+CED WHA CLG AA AAAT ASLEGRPF+CPR W + GL A R P GAGS LR V S+DPA+ G GLG DGH GL P+IKIR+EGLP AD C+ Y FK AA +++DA AA +RS+ ALQAVR +LRSRL+EERW+W RRR +GEER S+ DT+AAA +QA ++RR+D G AA+ ESS EL+PPTLG P PLF D ALS + VEQALMAW+FLSS RDL+G VLPP +RMI ALTPP GKA+AIP+PSEL FSE M+LTK+LLVEV D+LRR+MSKKLVD+VLAQ RP+NLLTWPEVAGDALVAL NHRAHPEMRTSE+AALLS RP+GWLARCGD+VAI+IS+PLAAAFVRPVDPA VPGYA+VV KPMDLSTVRRRLWSRRYQWHQ+V+DDLRLVWSNAKVFNQENTD WHAAD L +LTESLYE+WVLQPERRRDAESM+EAGLG +D P A T G A A A VK E +G T ED HP+ T +A+GAA AA G + L ++ AAA G DI G+ +++ A V V+E A+ + AA EIGGGG S S +LD EP FEAPGDDEA V E+ LVPA + T A V A C LCGG E S GSD GA G+ WV++PP LK LPAKLLPRF DL+RG+A DVV T+P EG LSS+ +WL LYR+ + + A +P A + R + NPF AR+AAHAGCV+KLWRARYLALRE AG+PA++ P GAT + T A A G GV ++P+T VA G E D DS +DE+E AK+MQA RDY RNRPLGRDR+GNEYWR GDK++VLVRRHGCWWG Y+G EK+QELVRSLDV D ER+LRNRLH+AVDVWGVS+++ YL+ K+AA G+ + RKG+ A ++ L++RR+EEADRIRG+LER + P+ W+ H R++WL E LEEFLPV+AAGSG + D FV SVRQQRLFAR++ELRLGEYLETYDDER A+ AYR GD+++ + V LEG AAG AK + GP +L RP SASLPGFDED+ + R+YWEPSVA VGLVS EMVKLKVEMLAVALCLPQ+WE ++ S SRGR R RP + AA + P ++ P FF PSR IAPEL AALKEAVE+Q+ +V + DG + +DIGMD +T +G + G G+ E PG P VPDQPFVRK QGKW SVESSSD+EDF GA + SM +DL+DWRERVRRA TE+LA LALELDYA+PREEGWLE WYKT++F EPRLGGGSSLAA ATRVFALDRALRW++IPRP +GGSRLPGDLPRAW F YQCPL+PLC+RPC HKGKC+ HR+ ++RVD PM+VP
Sbjct: 1 MASKRPYGDGFGGYSGGXXX-XXDSLKRPRRTAAADPEERNRARAEARMADVMSSLMKHKHAGLFLAPVDPRTAPSYEKYVQTPMDLGTIDRKLQAGGFAGDILGFAAQVRLVFANCLAYNPPGDWARAWGESCGGAFEAMYNAKLAPLLAAQSDMSHMLADEEGYGEPPDNELAGGRGNEGEGKIKKLKVRLKSSRGGADGGSGGGLTSSSPAPASQHGDWGSPASGA------------------------VRPPSKKXXXXXXXXXXXXXXXXXXXXATGGVKQVLPKIRITFNAKGTPKIAPPAAGRDSSQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELQLRQGVAAAPSEEASRKKCIKQAQRLLRKTLLPFRFGPYEVVSFGIVSPRPGFHTKAFMFPPGYRCTHSRFVRCNSKQYPGKKLVVRCDSEVVEGERSPLFQVEHCGQLLAEAASGIEAWHACLQLDGALARRTVFRLVRCKSVLNRLCCNEDVIAFLESVDPAEVPGYHTKITRPVHMRLVDQRLKRGGYVNEFAFASDVRLAWSNAKLFNREGSELWLAADRLSREFEALFCEWVINPPDGYGRGTQGNAPARGPWDDWQELRYFDNLQRCRGCAKAATKGKSAAAAVTTAEEAETARRKSMPPELVCSACEDEWHAICLGDGNNAGGGSGPAAVAAATKASLEGRPFLCPR---WCSP--RRGLLSSAPRRRTRARRPTGAGS---------------------------LR-------------------------------------------------------------------------------------------------TRGVTESIDPADGGVGLGADGHLGLIAPDIKIRVEGLPGADSCDLYAFKSAAHRREDAGRAAVERSKALGALQAVRRKLRSRLSEERWHWSRRRGRSGEERQTCSKADTYAAAKEQAAKKRREDTQMGRPAAAPLESS-ELLPPTLGKPSPLFPCDPALSGCSKTVEQALMAWDFLSSTRDLVGMVLPPTKRMIHALTPPTGKAVAIPTPSELAFSEACMLLTKILLVEVRDVLRRHMSKKLVDDVLAQ-RPVNLLTWPEVAGDALVALANHRAHPEMRTSEMAALLSVRPSGWLARCGDMVAILISRPLAAAFVRPVDPAQVPGYADVVSKPMDLSTVRRRLWSRRYQWHQEVVDDLRLVWSNAKVFNQENTDFWHAADSLALLTESLYESWVLQPERRRDAESMKEAGLGVVD----------APTPAASATAXXXXPG--------------ATTPAMGAQVKQE-------------------------EHTTPGTATAGETXXXXXXXXXXXXXEDG---------------------------------HPAVGAAGT---------------------------------DATGAAMPSTPQAAASGVVPETPLS----SSSPAAAVGTDISAASTX------XXXXXXXXGMDVDQSGAGDADVLVVKET----ASARERAAVEIGGGGDXXSESGDLDGXXSDGEEPQFEAPGDDEAPVRELALVPAGIERHWTTTGADDVKEAAGVCCLCGGAELSAGSDPVDSLSSSGAPLLANGGEETKEGEGGARGGEMWVIIPPELKTLPAKLLPRFADLRRGKAADVVKTTPEEGAATLSSALSPSWLRRLYRTPRDRAGDESLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSSPEACYASQANRREGNPFEARIAAHAGCVKKLWRARYLALRE-------------------------------------------------------------------------AGAPAANNNVP---------------------------GGATXXXXXXXXX-------XXXXXXVEGEPTATTAVAGGAAGVLAGVA--------------------------------------------ALPLTVVAGAGAEVNGEGDVETDVDSHVDEQELAKKMQAGFARRDYCRNRPLGRDRYGNEYWRFAGDKNLVLVRRHGCWWGTYDGPEKMQELVRSLDVDIDNERNLRNRLHEAVDVWGVSDKVDLYLKAKKAAXXXXXXXXXXXXXXXX--------------GSKSGRKGEGGA-TTNLEDRRKEEADRIRGHLERVNGPSQWQTCHNARDSWLATECRSLEEFLPVKAAGSGDVAADHRFVLGSVRQQRLFARSVELRLGEYLETYDDERMKAVESAYRNGDIDRQNLLAVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------XXXLEG----AAAG------------------------------------AKTRKGGPETLSPRPGSASLPGFDEDDLNTSRTYWEPSVAPVGLVSPEMVKLKVEMLAVALCLPQQWERVNAVRSVSSRGRIRQRPAGYENDDXXXXXXXXXXXXXXXXXXXXXXAGAAPDGQRPISPVAMAPGEFFQPSRVIAPELAAALKEAVEEQEAYKTQVAEAATSXXXXXXXXXXXXXVDGXXXXEVVDIGMDVANT-----DGGAGXXXXXXXXTEGLSGDRPGSGTAEAAPGEAPPVSPAKPKVAPEPV-----------VPDQPFVRKAQGKWASVESSSDEEDF------------------------------------------------------GA----------------------------------------------------------------------------------------------------------------------VVSMLVDLEDWRERVRRADATEQLAILALELDYAIPREEGWLEQWYKTENFAEPRLGGGSSLAAAATRVFALDRALRWDIIPRPRRGGSRLPGDLPRAWSFFYQCPLSPLCMRPCMHKGKCKAHRTMVTRVDHPMIVP 2459
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: A0A6H5KEI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI4_9PHAE) HSP 1 Score: 657 bits (1696), Expect = 1.360e-196 Identity = 469/1122 (41.80%), Postives = 584/1122 (52.05%), Query Frame = 3
Query: 6447 EEEFAKEMQANLKGRDYSRNRPLGRDRFGNEYWRMFGDKHMVLVRRHGCWWGAYEGSEKIQELVRSLDVSTDGERHLRNRLHKAVDVWGVSERLGAYLRTKRAAKGRPETSAVAWGSVSRAVDGVGGVDDGGSGGTVASRKGKTAAGSSFLDERRREEADRIRGNLERASKPALWKRQHQVRETWLEGEMHELEEFLPVQAAGSGGTSGDFLFVQASVRQQRLFARALELRLGEYLETYDDERDSAIIEAYRAGDLEQLRVEKVRLKVELGDDSADNRDSQGWVRNTLPAAMREIAAETRALRLLHPPDLRTPAQKRKDMDAFAAGATS-VASAAXXXXXXXVASERIAAREQARAALASAGAGAWHGSIPSAD------------AAALGGPDVKLEGGGSEEAAGQAGTMVPAGAMATVASETSASSRLVNSSISSVRLEV---AKDQGDGPASLGKRPESASLPGFDEDNPSAERSYWEPSVAGVGLVSAEMVKLKVEMLAVALCLPQRWELLH---SAPSRGRARGRPRQRHIAENAALVAPAPVAQELVPVAAVAVPEAAAGSIKRAEPASLPPVHFFAPSRGIAPELTAALKEAVEQQQTVYDEVEQ------------------DGTEAEDHIDIGMDDNSTAPVFDNGTPTPAAMKVDPSAGAVVGDT-GNPAVETLPGSPDPXXXXXXXXXXXXXXXXXXXXXXXPVPDQPFVRKTQGKWLSVESSSDDEDFQDDDCAMAEVETTVNQAHASAQKAEAXXXXXX-------------------------AGKPESLAIGPPVTADATPAFEGASPAAVAEGDEVWVTNEAATYHVAKAPGLSVAPPTAVHASAAVSSLAEVRTANETAPVEMAIDHAPLPSAPLPQAVNHVAIEGDGRPK--IEPTPQQSELETPSDDAAVR-----------------------PKRQEETPGVEISSMALDLDDWRERVRRAQTTEELASLALELDYALPREEGWLEPWYKTDSFPEPRLGGGSSLAAVATRVFALDRALRWNMIPRPCKGGSRLPGDLPRAWVFSYQCPLAPLCIRPCFHKGKCRFHRSGISRVDDPMVVP----ATPYRPLSHASNDEI 9536
E+E AK+MQA RDY RNRPLGRDRFGNEYWR GDK++VLVRRHGCWWG Y+G EK+QELVRSLD+ D ER+LRNRLH+AVDVWGVS+++ YL+ ++AA G+ + RKG+ A ++ L++RR+EEADRIRG+LER P+ W+ H+ R++WL E LEEFLPV+AAGSG + D FV S+RQQRLFAR++ELRLGEYLETYDDER A+ AYR GD+++LR+EK RLK +L D+ ADN D +GWVR TL AA R+IAAETRALR+LHPPD+RTPAQKRKD++ AAG S +A+AA XX ALG + + SV L + AK + GP +L RP SASLPGFDED+ + R+YWEPSVA VGLVS EMVKLKVEMLAVALCLPQ+WE ++ S SRGR R RP ++A+ AA + P ++ P FF PSR IAPEL AALKEAVE+Q+ +V + DG + ++ +DIGMD +T G A + GD G+ A E PG P +PDQPFVRK QGKW SVESSSD+EDF A+ E E V + A ++A AXXXXXX G P +A+ P A S A P A ++ +P+ I+ T +E++ + A + P E P V++ SM +DL+DWRERVRRA TE+LA LALELDYA+PREEGWLE WYKT++F EPRLGGGSSLAA ATRVFALDRALRW++IPRP +GGSRLPGDLPRAW F YQCPL+PLC+RPC HKGKC+ HR+ ++RVD PM+VP A PY HA+ +
Sbjct: 148 EQELAKKMQAGFARRDYCRNRPLGRDRFGNEYWRFAGDKNLVLVRRHGCWWGVYDGPEKMQELVRSLDMDIDNERNLRNRLHEAVDVWGVSDKVDLYLKAQKAAXXXXXXXXXXXXXXXXX-------------GSKSGRKGEGGA-TTNLEDRRKEEADRIRGHLERVLGPSQWQTCHKARDSWLATECRSLEEFLPVKAAGSGDVAADHRFVLGSIRQQRLFARSVELRLGEYLETYDDERMKAVESAYRNGDIDRLRMEKHRLKRDLADEPADNADGEGWVRTTLSAATRDIAAETRALRMLHPPDMRTPAQKRKDVEGLAAGGPSAIATAADAVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLALGSGQGXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGMSVALSLEGAAKTRKGGPETLSPRPGSASLPGFDEDDLNTSRTYWEPSVAPVGLVSPEMVKLKVEMLAVALCLPQQWERVNAVRSVSSRGRIRQRPAGYENDDDASXXXXXXXXXXXXXXXXXXXAGAAPDGQRPISPVAMAPGEFFQPSRVIAPELAAALKEAVEEQEAYKTQVAEAATSAXXXXXAGGKEAAVDGDDEDEVVDIGMDVANTGGGGGAG------------AEGLSGDRPGSGAAEAAPGGAPPVSPAKPEVAPEPV-----------IPDQPFVRKAQGKWASVESSSDEEDFG----AVGEDEAIVEEVDAVDEEATAXXXXXXXXXXXXXXXXXXXXXXPATNSPEVSGGDPSDMAVSTPEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---SFAXXXXXXXXXXXXXXXXXXXXXXXXXPPATLAPSVRPPAQPEALIQVTAAAAEVQPKPEQQATQXXXXXXXXXXXXXXXXXVLPITLPPPAPEPPRVQVVSMPVDLEDWRERVRRADATEQLAILALELDYAIPREEGWLEQWYKTENFAEPRLGGGSSLAAAATRVFALDRALRWDIIPRPRRGGSRLPGDLPRAWSFFYQCPLSPLCMRPCMHKGKCKAHRTMVTRVDHPMIVPESTEAAPYL-AQHATGQAV 1224
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: A0A6H5KEY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEY2_9PHAE) HSP 1 Score: 565 bits (1457), Expect = 4.490e-173 Identity = 381/797 (47.80%), Postives = 437/797 (54.83%), Query Frame = 3
Query: 375 ASNCFKRPRRTASDPKERVRAHAEAKMSEVLSSLMKHKHAGLFLTPVDPSTAPGYENYVRTPMDLGTIAKKLKAGGFAGDIRAFTAQVRLVFANCLAYNPPGDWARAWGESCGGAFEAMYNAKLAPLLA-ESEMEEESPDAEGSQDD-----VGARG----AKSKKLKVKLKKGGAGMGSGHAAMRSSKGCSLPRGKQSAQALDADTSXXXXXXXXXXXXXXXXXXXXXXXPPPKKQRAASTGMRVGANVKDGRPGGKALPKIRITFNAIGAPKIASPRAGTLPSIS---------GPTASPKTRKATIKIPPLRISPPGAAQQGDGARVNASGRRTRSVGGDLDGGHHGAGVLKLPPRARSRASSPASTSLGRKRAEFGVGGEGDSVEEDEGAERDD-------------------------------------------DMNEQEKEVSTEDEELVRKNYVKQAKRLFRKTTFPFRSGPYEVTSFGLISVRPEFHYEDFIFPPGFRCTHSRFLRALSKQYPGRRLVVRCDSSVVERDGSPRFHVEHCGQLLAEATSGLEAWHAAMQLDRALARRIVFRLVRCKAVLNRLCCSSDIMAFLEAVRPEEVPTYHSKILRPMHMRVVKERLARGGYLNEFAFASDIRLAWSNAKLFNREGSDLWMAADRLSSEFESLFCAWVINPPDGFGRGTQGNAPAQGPWDDWQHLRYFDPFDDCKGCSKASKSTTKPEAGGIDVEGADGAMGA---PELVCSSCEDGWHAACLG----------AAAGAAATTASLEGRPFMCPR 2540
AS R R +P+ER RA AEA+M++V+SSLMKHKHAGLFL PVDP TAPGYE YV+TPMDLGTI +KL+ GGFAGDI F AQVRLVFANCLAYNPPGDWARAWGESCGGAFEAMYNAKLAPLLA +S+M + D E S + G RG K KKLKV+LK G P + + A + XXXXXXXXXXXXXXX A+ G++ + LPKIRITFNA G PKIA P AG S S +I+ P GV + SS T G ++ ++ V+ EE RK +KQA+RL RKT PFR GPYEV SFG++S RP FH E F+FPPG+RCTHSRF VRC+ QLLAEA SG+EAW A +QLD ALARR VFRLVRCK+VLNRLCC+ D +AFLE+V P EVP YH+KI RP+HMR+V +RL RGGYLNEFAFASD+RLAWSNAKLFNREGS+LW+AADRLS EFE+LFC WVINPPDG+GRGTQGNAPA+G WDDWQ LRYFD C+GC+KAS A E A+ A PELVCSSCED WHA CLG AA AAAT ASLEGRPF+CPR
Sbjct: 37 ASLTLTRVRHGNRNPQERNRARAEARMADVMSSLMKHKHAGLFLAPVDPRTAPGYEKYVQTPMDLGTINRKLRTGGFAGDILGFAAQVRLVFANCLAYNPPGDWARAWGESCGGAFEAMYNAKLAPLLAAQSDMSDMLADEEESGEPPDHEVAGGRGNEGEGKIKKLKVRLKNS-RGXXXXXXXXXXXXXXXAPASQHADWGSPASGAVRPPSKKRXXXXXXXXXXXXXXXXXXXXXXXATGGVK------------QVLPKIRITFNAKGTPKIAPPAAGRDSSQSPXXXXXXXXXXXXXXXXXXXXXXXXXXKIARPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWGVRDGWSERQRGPSSVVLTMKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELQLRQGVVAAPSEEASRKKCIKQAQRLLRKTLVPFRYGPYEVVSFGIVSPRPGFHTEAFMFPPGYRCTHSRF--------------VRCNFK----------------QLLAEAASGIEAWRACLQLDGALARRTVFRLVRCKSVLNRLCCNEDAIAFLESVDPAEVPGYHTKITRPVHMRLVDQRLKRGGYLNEFAFASDVRLAWSNAKLFNREGSELWLAADRLSREFEALFCEWVINPPDGYGRGTQGNAPARGTWDDWQELRYFDNLKGCRGCAKASTKVKSAAAAVTTAEEAETARRKSMPPELVCSSCEDEWHAICLGDGNNAGGDDGPAAVAAATKASLEGRPFLCPR 790
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: A0A6H5KKJ2_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ2_9PHAE) HSP 1 Score: 419 bits (1078), Expect = 5.080e-125 Identity = 309/635 (48.66%), Postives = 351/635 (55.28%), Query Frame = 3
Query: 3516 MAWNFLSSFRDLLGFVLPPARRMIDALTPPKGKAIAIPSPSELTFSETGMVLTKLLLVEVHDILRRNMSKKLVDEVLAQSRPLNLLTWPEVAGDALVALCNHRAHPEMRTSELAALLSSRPAGWLA---RCGDLVAIVISQPLAAAFVRPVDPALVPGYAEVVLKPMDLSTVRRRLWSRRYQWHQQVMDDLRLVWSNAKVFNQENTDLWHAADCLEILTESLYEAWVLQPERRRDAESMREAGLGGMDDSSAAPGSEPKPESAEEGTGDATKGGVEVKQE-------------------------LAPPEPAVA----DAAAAEASVKSELAVEQPRQXXXXXXXXXXXXXXXXXXXXXXXXXXSGATGLPVVVNGVDAVQEDXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------AAVAVFRRG------------RLPLDPATVHPSFAGRRTLPRHESPASGRSYGLWDPQSVHPAYFGHLRHDGEASGAAGIEGWTGAADGGAMDRALRVLRGATDSAAAGGEDIGRG--DLAGVVRWSPEQRATVLGLLCEEAAMTGAAVEHVQ 5033
MAW+FLSS RDL+G VLPP +RMI ALTPP GKA+AIP+PSEL FSE M+LTK+LLVEV D+LRR+MSKKLVD+VLAQ RP+NLLTWPEVAGDALVAL NHRAHPEMRTSE+AALLS RP+GWLA RCGD+VAI+IS+PLAAAFVRPVDPA VPGYA+VV KPMDL ENTD WHAAD L +LTESLYE+WVLQPERRRDAESM+EAGLG +D + A T AT G +VKQE PAV DA A ++ A + XXXXXXXXXXXXXX TG+ V +G + XXXXXXX AA A G RLPLDPA+VHP+FAGRR L RHESPASGRSYGLWD FGHLRHDGEASGAAG++GWTGA DGGA+DRALRVLRGA DS A G ++AGVVRWS E+RATVLGLLC+E + TG AV+H++
Sbjct: 1 MAWDFLSSSRDLVGMVLPPTKRMIHALTPPTGKAVAIPTPSELAFSEACMLLTKILLVEVRDVLRRHMSKKLVDDVLAQ-RPVNLLTWPEVAGDALVALVNHRAHPEMRTSEMAALLSVRPSGWLASIIRCGDMVAILISRPLAAAFVRPVDPAQVPGYADVVSKPMDL----------------------------------ENTDYWHAADSLALLTESLYESWVLQPERRRDAESMKEAGLGVVDAPTPAAXXXXXXXXXXXVTTPAT--GAQVKQEEYTSPGTATAGEXXXXXXXXXXXXXXXXEHPAVGAAGTDATGAAVPSTTQTAASRVEPGTRLSSSSPAAAXXXXXXXXXXXXXXXXTTGMDVDQSGTGDADANITAAXXXXXXXATVKTEXXXXXXXXXXXXXXXXXXXXSPNADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARAPAPAGISRSTSTGGRPERLPLDPASVHPAFAGRRPLSRHESPASGRSYGLWDXXXXXXXXFGHLRHDGEASGAAGLDGWTGAGDGGAIDRALRVLRGAADSEVAAAVVAGGAGKEVAGVVRWSAEERATVLGLLCDEVSATGVAVDHMK 598
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: A0A482RQT6_9ARCH (Bromo domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQT6_9ARCH) HSP 1 Score: 140 bits (352), Expect = 2.060e-31 Identity = 98/257 (38.13%), Postives = 132/257 (51.36%), Query Frame = 3
Query: 1593 LFRKTTFPF--RSGPYEVTSFGLISVRPEFHYEDFIFPPGFRCTHSRFLRAL--SKQYPGRRLVVRCD-----SSVVERDGSPRFHVEHC---GQLLAEATSGLEAWHAAMQLDRALARRIVFRLVRCKAVLNRLCCSSDIMAFLEAVRPEEV--PTYHSKILRPMHMRVVKERLARGGYLNEFAFASDIRLAWSNAKLFNREGSDLWMAADRLSSEFESLFCAWVINPPDGFGRGTQGNAPAQGPWDDWQHLRYFD 2321
L R T PF G E+ SFG + + DF+ P + T S AL S G +V V + P F V C G ++AEA+S L+AW + + + + + RC+AVLNRLC S D FL+AV P+ Y+ I PM +R V RL RG Y +EF FA D+RL + N ++FNRE S L+MA+ RLS +FE+LFCAWV+N D A+GPWDDWQ ++ D
Sbjct: 45 LVRSTPLPFVLEPGLLEIRSFGSLVKGISTLFCDFVCPVNYT-TASDLAIALAHSNNSAGATSLVEVRLLSVVKPAVSQGQGPIFSV--CLEKGTVVAEASSPLDAWQGVHGREVQVLQSMAGTVDRCRAVLNRLCISPDAPPFLDAVDPQSDIGVAYYEAIKAPMWIREVHSRLLRGDYESEFDFAWDVRLVFRNCQIFNREDSALYMASQRLSMQFETLFCAWVLNVVD-----KDVTQRARGPWDDWQVMQSLD 293
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: A0A836CNY5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNY5_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.930e-23 Identity = 63/138 (45.65%), Postives = 78/138 (56.52%), Query Frame = 3
Query: 9078 ISSMALDLDDWRERVRRAQTTEELASLALELDYALPREEGWLEPWYKTDSFPEPRLGGGSSLAAVATRVFALDRALRWNMIPR--PCKGGSRLPGDLPRAWVFSYQCPLAPLCIRPCFHKGKCRFHRSGISRVDDPMV 9485
I+++ LDL WRERVR A EL LA ELD ALPR+ GWL PW+ ++LAA A R++ LDRAL+W IP +G LP LPR F+ QCPL PLC H G+C R+ SRV P+V
Sbjct: 2668 IAALPLDLRAWRERVRAATAASELVDLAEELDAALPRDRGWLAPWFVAAPLALRDSSNAATLAAAAARIYTLDRALQWEAIPARFDARGARVLPRHLPRHHCFNGQCPLVPLCTERVGHLGRCTTSRNNFSRVGPPLV 2805
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: C1EI63_MICCC (Bromodomain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EI63_MICCC) HSP 1 Score: 87.8 bits (216), Expect = 3.160e-15 Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 3
Query: 414 DPKERVRAHAEAKMSEVLSSLMKHKHAGLFLTPVDPSTA--PGYENYVRTPMDLGTIAKKLKAGGFAGDIRAFTAQVRLVFANCLAYNPPGDWARAWGESCGGAFEAMY 734
D +E + + ++ +V+++L +H+ +F PVDP P Y + V+TPMDLGT+A K++ G + GD+ F RLVF+NC AYNPPG A G++ F+ +
Sbjct: 72 DEEEILNDDLKGRLEKVINALQRHRFYFIFAQPVDPVALNIPDYFDVVKTPMDLGTVANKVRNGAYKGDVTDFEDDARLVFSNCRAYNPPGSDAATMGDAVEKEFDKKW 180
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: A0A7S0I7U8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I7U8_MICPS) HSP 1 Score: 86.7 bits (213), Expect = 4.430e-14 Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 3
Query: 444 EAKMSEVLSSLMKHKHAGLFLTPVDPSTA--PGYENYVRTPMDLGTIAKKLKAGGFAGDIRAFTAQVRLVFANCLAYNPPGDWARAWGESCGGAFEAMY 734
+ ++ +V+++L +H+ +F PVDP P Y + V+TPMDLGT+A K++ G + GD+ F + RLVF+NC AYNPPG A G++ F+ +
Sbjct: 167 KGRLEKVMNALQRHRFYFIFAQPVDPVALNIPDYFDVVKTPMDLGTVANKVRDGAYKGDVFDFEDEARLVFSNCRAYNPPGSDAATMGDAVEKEFDKKW 265
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: A0A7S0R5Q0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0R5Q0_9CHLO) HSP 1 Score: 81.6 bits (200), Expect = 4.310e-13 Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 3
Query: 450 KMSEVLSSLMKHKHAGL-FLTPVDPSTAPGYENYVRTPMDLGTIAKKLKAGGFAGDIRAFTAQVRLVFANCLAYNPPGDWARAWGESCGGAFEAMYNAKLAPLLAESEMEEESPDAEGSQDDVGARG 827
K ++ L ++M ++ G F+ PV+ APGY + V+TPMDLGTIA KLK G+A + + F A V LV+ NC AYNP GD R +G + F +Y + P+ + E+ + A+G + V G
Sbjct: 61 KGADALKAVMSNRKFGFPFVRPVNIKEAPGYLDVVKTPMDLGTIAAKLKKKGYANEAQ-FLADVELVWRNCYAYNPEGDEFRDFGRASEQLFNKIYG-RPTPVEHLAPEEQAAARAQGGRGSVAQHG 185
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Match: A0A1Y2FMN7_9FUNG (Transcription initiation factor TFIID subunit 2 n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2FMN7_9FUNG) HSP 1 Score: 82.4 bits (202), Expect = 2.420e-11 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 3
Query: 435 AHAEAKMSEVLSSLMKHKHAGLFLTPVDPSTAPGYENYVRTPMDLGTIAKKLKAGGFAGDIRAFTAQVRLVFANCLAYNPPGDWARAWGE 704
++ ++++ ++S L H + +FL PVDP P Y ++R PMDL TI KKL + I F + + L+F+NC YNPPG WAR G+
Sbjct: 2327 SNIKSQLLTIVSKLQSHSCSQIFLEPVDPKQFPDYHKFIRNPMDLSTIKKKLDKNKYKS-IEDFKSDISLIFSNCNIYNPPGSWAREQGQ 2415 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1130.1.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1130.1.7 >prot_A-nodosum_M_contig1130.1.7 ID=prot_A-nodosum_M_contig1130.1.7|Name=mRNA_A-nodosum_M_contig1130.1.7|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=3366bp MASKRTFDGRLHTHEGGGRGKASNCFKRPRRTASDPKERVRAHAEAKMSEback to top mRNA from alignment at A-nodosum_M_contig1130:45911..77208+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1130.1.7 ID=mRNA_A-nodosum_M_contig1130.1.7|Name=mRNA_A-nodosum_M_contig1130.1.7|organism=Ascophyllum nodosum dioecious|type=mRNA|length=31298bp|location=Sequence derived from alignment at A-nodosum_M_contig1130:45911..77208+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1130:45911..77208+ >mRNA_A-nodosum_M_contig1130.1.7 ID=mRNA_A-nodosum_M_contig1130.1.7|Name=mRNA_A-nodosum_M_contig1130.1.7|organism=Ascophyllum nodosum dioecious|type=CDS|length=10098bp|location=Sequence derived from alignment at A-nodosum_M_contig1130:45911..77208+ (Ascophyllum nodosum dioecious)back to top |