mRNA_A-nodosum_M_contig113.22.3 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig113.22.3
Unique NamemRNA_A-nodosum_M_contig113.22.3
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE)

HSP 1 Score: 790 bits (2040), Expect = 2.000e-261
Identity = 523/1188 (44.02%), Postives = 669/1188 (56.31%), Query Frame = 1
Query:   67 QRLGVIVPAHRGDLDRAVSSLGRWPAKCSPVTQKNVDIVLYYAEGEEDTAAAAAMPKIVDSAGRCFADTRLVYANLSEEEDIYPKGPSVQFYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDECSVASWRAT--------ATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIEKWQGNDNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCE--SDD----RICDSSXXXGEPYGDLGCNAEDGTYGLFCRACYNDETEALAADSAENRAIMCATGEPVTQYATRQ----------------LRAEASADAPHTAREL----------QPWRXXXXXXXXXXXQGN----------------------DNSEPKCKNGCE--SDD----RICDSSCATGEPYGDLGCNAEDGTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRETRSGRRSRNGRATTTA----------------------------------------------SPST--CKNGCE--SDD----RICDSSCATGEPYGDLGCNAEDGTYGLFCRICYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKYVWIMRSSKLQASVPCGIHFHYDDSIPRDRYPSRQCATGEPVTQYATRQLRAVDNTFDPATETPSFDLEAFISVSANTSLTNDIVRGDICAFISGGMNEVEQADVTAQSILEFVPGVRVVIAAEAGSKPAYESAAGLYPSVSVFDASSARTASLFADEYCGEGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSDARTSYRDFEIARATSAVLGFKAPSFTHGADLMLPVGANKDLREELTMGIDS-GLT-DKDAAALAALESY----DVSSVPQLLAALAYSKSTPGVWFVNPQAWVTEHLFKTASIWDVPLVKPRFTCTIERSLYSSQASAENAELLTKNLDFFQKGGLCENGVIFANP 3246
            Q+LGV+VP ++GDL RAVSSL RWPAKCSP+T +N D+VLYYAE EE +A A+A+  I  +AGRCFA TR+V+ANL+EE+DIYP+GPSV FY MFLDEDVR+ L EYDAL+IIEWDVLVA+D SFE+LY AAF   E+FWVKGSNLEGT+FH  A + +MW +LGHINGNAIY N+D  F E+V+YTR+RWGY++PYDVALW TISDFPYSWPL+QR+S KFV TNLIS+VGYEHV+   V+DA+A  +LFIHGS VDE +VAS+ AT          T+R L +  P          W+E +KWKT            XXXXXXXXXXXXX      XXX            S D           C NGCE  S D    R+CDS+    + YG LGC A+ G YG  CRACYND  +A   D+  NRAIMC+T  PV  Y  R                 L+ +AS+ +    R+L          + W+XXXXXXXXXXX                          + E  C +GCE  S D    R+CDS+C+  + YG LGC A+ G YG  CR CYND  +A   D+  NRAIMC+T  PV  Y  R+L     +D    AR L+  +E  S     + R T                                                 SP    C +GC+  S D    R+CDS+C+  + YG LGC A+ G YG  CR CYND  +A   D+  NRAIMC+T EPV  Y  R+L A      P  A++++                ++NSE  Y                                      EP  +    + +A+                 F   +A      +I RGD+CAF+SGG+ E    +VT +SIL+F+PG++V IAAE+    AYE + G  P V+V    +  TA+LFAD+YC   ++LI YV  GSV+SR+FT KDTHSPRGDLLVV++ ++ SY D E++  +S+VLGF+ PSFT G DLMLP  AN  +RE L + I S GL  D+D  A+ AL+ +     VS+VPQ+LAA+AYS+ TPGVWFV+P+ WV ++LFK ASIWD+PLVKPRFTCTI      S +S + A++L  ++ FF  GG C NG+I   P
Sbjct:   28 QQLGVVVPTYKGDLARAVSSLERWPAKCSPLTLENADLVLYYAE-EESSATASALDSISSTAGRCFARTRIVFANLAEEDDIYPQGPSVMFYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWQLLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAIAGNTLFIHGSSVDEGNVASYEATEGDASVDVTATQRHLTEDVP---------KWKEQEKWKTS-----------XXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSPD--------EEGCMNGCEYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARKQDTPANRAIMCSTKMPVDVYDRRLTAVESDPLLVARDLEVLQKDASSPSVEEHRQLTEDVPKWKEQEKWKXXXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSSDEEGCLDGCEYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARKQDTPANRAIMCSTKMPVDVYG-RRLTPVDESDPLLVARGLEALQEDASSPPQEHRRLTEDVPKWKXXXXXXXXXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSPDEEGCLDGCDYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARTQDTPANRAIMCSTREPVDVYG-RRLSAHPEDRFPQLAQQMEA-----------EDSEDENSEGSY--------------------------------------EPRVEVEVGREKAI----------------RFFEAAAERPYLGEINRGDLCAFVSGGVGEEAMWEVTVKSILQFMPGMKVAIAAESEGLDAYERSMGRLPGVTVSGTQNPATAALFADKYCSF-SELILYVRPGSVLSRSFTPKDTHSPRGDLLVVHAGSQGSYHDTELSHRSSSVLGFETPSFTQGTDLMLPGDANYYVREALGLKIGSEGLQEDRDGDAVIALQEFVYFDQVSAVPQVLAAVAYSRKTPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRFTCTIASDKLDS-SSPKTAQVLQNSVVFFANGGKCANGLIADAP 1117          
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI)

HSP 1 Score: 748 bits (1932), Expect = 4.200e-241
Identity = 527/1454 (36.24%), Postives = 683/1454 (46.97%), Query Frame = 1
Query:   61 SQQRLGVIVPAHRGDLDRAVSSLGRWPAKCSPVTQKNVDIVLYYAEGEEDTAAAAAMPKIVDSAGRCFADTRLVYANLSEEEDIYPKGPSVQFYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDECSVASWRATATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIEKWQGNDNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCE------SDDRICDSSXXXGEPYGDLGCNAEDGTYGLFCRACYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGN-DNSEPK-------------------------------------------------CKNGCE------SDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQP-----------------------------WRET------------------------------------------------RSGRRSRN-----------------------------------------------------------GRATTTASPS----------------------------------------------------------------------------------TCKNGCE------SDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRICYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGN-DNSEPKYV----WIMRSSK---------------------------------------------------------LQASVP------------------CGIHFHYDDSIPRDRYPSRQ---CATGEPVTQYA--------TRQLRAV---------DNTFDPATETPSFDLE-----AFISVSANTSLTNDIVRGDICAFISGGMNEVEQADVTAQSILEFVPGVRVVIAAEAGSKPAYESAAGLYPSVSVFDASSARTASLFADEYCGEGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSDARTSYRDFEIARATSAVLGFKAPSFTHGADLMLPVGANKDLREELTMGIDSGLT-DKDAAALAALESY----DVSSVPQLLAALAYSKSTPGVWFVNPQAWVTEHLFKTASIWDVPLVKPRFTCTIERSLYSSQASAENAELLTKNLDFFQKGGLCENGVI 3234
            SQQRLGVIVPA+ GDL RAVSSL RWP KCSP+T KN D+VLYYAE E  +A A+A+  I  +AGRCF+ TR+VYANL+EE+DIYPKGPSV FYKMFLDE+VR+ L EYDAL+I+EWDVLVA+D SFE+LY AAF   E+FWVKGSNLEGT+FH +A +++MW VLGHINGNAIY N+D  F E+V+YTR+RWGY++PYDVALW TISDFPYSWPL+QR+S KFV TNLIS VGYEHV    V+DAVA  +LFIHGS V++ +VAS+ A A+T  + +DV   A Q+R  +      KWKT EKW+ + +                 XXXXXXXX                          C + CE      +  R+CD++    + YG  GCNA+ GTYG  CRAC+ND  +A   D+ ENR+IMC+T  PV  Y  R+L A+  +D    AR+L+  +                 S PK                                                 C + CE      +  R+CD++C+T + YG  GCNA+ GTYG  CR C+ND  +A   D+ ENR+I+C+   PV  Y  R+L A+  +D    A  L+                              WR +                                                R G R R                                                            GR  T    S                                                                                   C + CE      +  R+CD++C+T + YG  GCNA+ GTYG  CR C+ND  +A   D+ ENR+IMC+T  PV  Y  R+L A+  +D     R L+  +                 S PK+     W  R+SK                                                            S P                  C   F+  D   +   P  +   C+T  PV  Y         +R LR           +   D   E  + D++     +F   +A    + D+ R ++CAF+ G   E    DVT +SIL+FVPG+RV IAAEA    AYE + G  P V+V    +  TA+LFAD+YCG GT LI YVE GSV+SR FTSKDTHSPRGDLLVV++ ++ SY D ++ R +++VLGF APSFTHG DLMLPVGAN+DLRE L +   + L  D D A++ AL+        S+VPQ+LAALAYS+ TPGVWF++PQAWV +HLF+ ASIW++PLVKPR+TC I  +      S + AE+L  NLDFF  GG C NG+I
Sbjct:   27 SQQRLGVIVPAYDGDLARAVSSLERWPVKCSPLTLKNADLVLYYAE-EASSATASALDSISSTAGRCFSRTRVVYANLAEEDDIYPKGPSVMFYKMFLDENVRSSLSEYDALSIVEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISYVGYEHVSHDTVSDAVAGKTLFIHGSSVEDGNVASYEAVASTATATVDV---AKQTRGRKLTGSTPKWKTQEKWRSSKDDS--------------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSTCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSTKRPVEGYG-RRLTADDESDPLRVARDLETLQEDASSPSGEEEHRQLSGSTPKWKSQEKWRTSKDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSSCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIICSNKRPVEGYG-RRLTADDESDPLRVAHSLETLQEDASSPSGEEEHRQLSGSTPKWKSQEKWRTSKDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACSSSCEYTSRDGTRGRXXXXXXXXPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSNKRPVEGYGRRLTANDESDPLRVARSLETLQEDASSPLEEEEHRQLSGSTPKWKSQEKWRTSKDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSSCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSTKRPVEGYG-RRLTADDESDPLRVGRSLETLQEDASSPSGEEEHRQLSGSTPKWKSQEKW--RTSKDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSTCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSTVMPVDVYGRRLTPDDGSRPLRVAKIFSVEDSEEEADDVEEELANVDVDREDVISFFEEAAERPYSQDLKRRNLCAFVGGRAGEEAMWDVTVKSILQFVPGMRVAIAAEAEGLDAYERSMGGLPGVTVSGTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSQGSYHDAQLRRRSASVLGFDAPSFTHGTDLMLPVGANEDLRESLGLRHGASLQHDGDWASMVALQELVEFDQFSAVPQVLAALAYSRDTPGVWFLDPQAWVGQHLFQEASIWNIPLVKPRYTCAIAPAQLEP-GSPKTAEVLQSNLDFFSMGGKCANGLI 1456          
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI)

HSP 1 Score: 707 bits (1826), Expect = 5.650e-225
Identity = 559/1511 (37.00%), Postives = 704/1511 (46.59%), Query Frame = 1
Query:   16 AAAADERSDNAVKSPSQQRLGVIVPAHRGDLDRAVSSLGRWPAKCSPVTQKNVDIVLYYAEGEEDTAAAAAMPKIVDSAGRCFADTRLVYANLSEEEDIYPKGPSVQFYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDECSVASWRATATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIEKWQGNDNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCESDDRICDSSXXXGEPYGDLGCNAEDGTYGLFCRACYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASA-------------DAPHTARELQP---------------------WRXXXXXXXXXXX------------------------------QGNDNSEPKCKNGCE------SDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQ--------PWRETRSGRRSRNGRATTTASPSTCKN--------------------------GCE----------------SDDRICDSSCATGEPYGD---------------------LGCNAEDGTYGLFCRICYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAE------------------------ASADAPHTA----RELQPWRXXXXXXXXXXX--------------------------------------------------------------------------QG---------------------NDNS-------EPKYVWIMRSS-----------------KLQASVP---------------------------------------------------------------------------------------------------------------CGI------------HFHYDDSIPRDRYPSR--QCATGEPVTQYATRQLRAVDNTFDPAT-----------ETPSFDLEA-----FISVSANTSLTNDIVRGDICAFISGGMNEVEQADVTAQSILEFVPGVRVVIAAEAGSKPAYESAAGLYPSVSVFDASSARTASLFADEYCGEGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSDARTSYRDFEIARATSAVLGFKAPSFTHGADLMLPVGANKDLREELTMGIDSGLT-DKDAAALAALESY----DVSSVPQLLAALAYSKSTPGVWFVNPQAWVTEHLFKTASIWDVPLVKPRFTCTIERSLYSSQASAENAELLTKNLDFFQKGGLCENGVIFANP 3246
            AA A  + D+   +P QQRLGV+VPA++GDL RAVSSL RWPAKCSP+T +N D+VLYYAE EE +A A+A+  I  +AGRCF+ TR+VYANL++E+DIYP+GPSV FY MFLDE VR+ L EYDAL+IIEWDVLVA+D SFE+LY AAF   E+FWVKGSNLEGT+FH TA +++MW VLGHINGNAIY N+D  F E+V+YTRSRWGY++PYDVALW TISDFPYSWPL+QR+S KFV TNLIS+VG+EHV    V+DAVA  +LFIHGS V+E +VAS+RA A    ++ + +P   +SRKL       KWKT EKW+ ++    XXXXXXXXXXXXXXXXXXXXXX                                         XXX       GCNA+ G YG  CR CYN+   AL  DS +NRAIMC+T +PV  Y  R   A+ S              +A   + E+Q                      WR      XXXXX                                + +S+P C + C       +  R+CDS+C++   YG  GCNA+ G YG  CR+CYN+   AL  DS +NRAIMC+T +PV  Y  R++ A   ++A   AR L+        P  E  S  +    R  T+  P    N                          G E                 DD   D+ C++   Y                        GCNA+ G YG  CR+CYND   AL  DS +NRAIMC+T  PV  Y  R   AE                        AS D   T+    +  + WR       XXXX                                                                          QG                      DN        +P  V+  R S                 K +AS P                                                                                                               CG             + + D ++ +D   +R   C+T  PV  Y  R+L A D + DP             E  S D++      F   +A  S + D+ R ++CAF+ G   E    +VT  SIL+F+PG+RV IAAEA    AYE + G  P V++    +  TA+LFAD+YCG GT LI YVE GSV+SR FTSKDTHSPR DLLVVY+ ++ SY D ++   +++VLGF APSFTHG DLMLPVG N+ LRE L +   + L  D D A+L AL+       VS+VPQ+LAALAYS+ TPGVWFV+PQAWV ++LFK ASIWDVPLVKPR+TC I   +     S   AE+L  NLDFF KGG C NG+I   P
Sbjct:   15 AALALAQQDHHEVAPRQQRLGVVVPAYKGDLARAVSSLERWPAKCSPLTLENADLVLYYAE-EESSATASALESISTTAGRCFSRTRIVYANLAQEDDIYPRGPSVMFYNMFLDESVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRSRWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGFEHVGHDMVSDAVAGQTLFIHGSSVEEGNVASFRAAAAAAVAVEEPQPAQQRSRKLTSV---PKWKTAEKWRNSNGDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCNAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVKPVDVYRRRMSAADESEPSRVARSLEALNEEASSPSEEVQSAVKVNQDRKLTSVPKWKANEKWRTANDDGXXXXXXXXXXXXNKXXXSEXXXXXXXXXXXRNDSSDDSSSSDPGCSSRCTYTSKDGTKGRVCDSNCSSPNVYGTKGCNAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVKPVDVY-RRRMSAVDESEASRVARSLEVLKEEASSPSEEVESAVKVTRDRKLTSV-PKWKANEKWRTANDDGXXXXXXXXXXXXXXXXGSEXXXXXXXXXXXXXXSSDDDSSSDAGCSSRCTYTSKDGTKGRVXXXXXXXXXXXXXXGCNAKQGIYGADCRVCYNDLDRALKQDSPDNRAIMCSTVMPVDAYGRRMSAAEEGLPSFVARSLEALKEDASSLSWKASLDRKLTSVPKWKAEEKWRTANDDGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVKPVDVYRRRMSAADESEASRVARSLEALKEEASSPSEEVESAVKVNQYRKLTSVPKWKANEKWRTANDDGXXXXXXXXXXXXXXXXGSEXXXXXXXXXXXXNDSSDDSSSSDAACSSRCTYTSKDGTKGRVCXXXXXXXNVYGTKGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVMPVDVYG-RRLSASDES-DPLRVAKMIEAEDVGEELSVDVDREQAIRFFEEAAERSYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGIRVAIAAEAEGLDAYERSMGGLPGVTISSTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRSDLLVVYTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPVGTNEALRESLGLRHGASLQHDGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIA-PVQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIDFMP 1516          
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI)

HSP 1 Score: 643 bits (1658), Expect = 2.780e-206
Identity = 453/1065 (42.54%), Postives = 569/1065 (53.43%), Query Frame = 1
Query:  157 VTQKNVDIVLYYAEGEEDTAAAAAMPKIVDS-AGRCFADTRLVYANLSEEEDIYPKGPSVQFYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDECSVASWRATATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIEKWQGNDNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCESDDRICDSSXXXGEPYGDLGCNAEDGTYGLFCRACYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKCKNGCESDD----RICDSSCATGEPYGDLGCNAEDGTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRETRSGRRSRNGRATTTASPSTCKNGCE--SDD----RICDSSCATGEPYGDLGCNAEDGTYGLFCRICYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKYVWIMRSSKLQASVPCGIHFHYDDSIPRDRYPSRQCATGEPVTQYATRQLRAVDNTFDPATETPSFDLEAFISVSANTSLTNDIVRGDICAFISGGMNEVEQADVTAQSILEFVPGVRVVIAAEAGSKPAYESAAGLYPSVSVFDASSARTASLFADEYCG--EGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSD-ARTSYRDFEIARATSAVLGFKA-----------PSFTHGADLMLPVGANKDLREELTMGIDSGLTDKDAAALAALESYDVSSVPQLLAALAYSKSTPGVWFVNPQAWVTEHLFKTASIWDVPLVKPRFTCTIERSLYSSQASA----------ENAELLTKNLDFFQKGGLCENGVIFANP 3246
            ++ KNVD+VLYYAEGEED+ A  A  +++ + AGRCFAD R VYA+L +EED+YPKGPSV F+KMFLDE V A+L EYDALAIIEWDVLVATD+SFE+LY AAF   E+FWVKGSNLEGTNFH +A   DMW V+GHINGNAIY NND  F E+VDYTR+R+ Y+YPYDVALW TISDFPYSWPL+QR+S KFVTTNLIS VGYEHVD   V+DA+A  +LFIHGS VDE S AS + TA                                          XXXXXXXXXXXXXXXXXXXX        P  L    +   S L +  R       ++ +  +                              E     A  A  R     TG P+ + + R+   +   +     +  + W+            G+D+   KC++   S+D    R+CDS+C  G PYGDLGC+A+ G YG  CR C+ND   AL  D+ +NRAIMC+T  PV    +     E++  AP    ++   R  + GRR     ++    PS C + CE  S+D    R        G PYG LGC+ EDG YG  CR C+ND   AL  D+ +NRAIMC T  PV   + R +                   XXXXXXXXXXX                                         S +     P          A  +    AT+  +    AF   +A +  T D+  G +CAFI+G   EV++  VT  SI +F PG+RV +AAE  +   YE A G  P V+V    SA TASL+AD YCG  + T LI YV  GS  SR  TSKDTHSPRGDLLV +S  AR S+   ++A+ T++VL               PSFT G DLMLPVGAN DLR+      D     +    LA L+  D+++VPQ LAAL YS+   GVWF++PQAW++E+LFK  SIWD+PLVKPRFTC ++ +L  +  SA          E A++L   LDFF KGG C NG I   P
Sbjct:    1 MSSKNVDLVLYYAEGEEDSEAVGAAAEVIAATAGRCFADVRTVYAHLEQEEDVYPKGPSVMFFKMFLDEGVHAELSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYPYDVALWLTISDFPYSWPLYQRYSRKFVTTNLISYVGYEHVDHDTVSDAIAGQTLFIHGSRVDEGSGASIKETAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXGTSESASEPSRLRMRSERPFSRLETPERHVAARREEEEVAAT-----------------------------PEAVPQEASPARRRLKGGNTGLPIERRSFRRWGEDRELEEGPEWQTERKWKRFDY--------GSDSCMAKCEH--TSNDGTRGRVCDSTCENGHPYGDLGCSAKGGKYGPHCRTCFNDVDTALMRDTPKNRAIMCSTMLPVGARTSP----ESARPAPKK-NDVPAARGVKQGRRVLRTTSSAGDEPSDCDDSCEYTSNDGTTGRXXXXXXXDGNPYGFLGCDTEDGQYGGNCRYCFNDVDSALKFDAQDNRAIMCDTLLPVDVNSRRLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEAMASAPRASTGALPSSARHSAPSGATDKQAL---AFAQ-AAKSPFTEDVAYGSLCAFIAGRAGEVDEWAVTVSSIQKFAPGMRVAVAAEEDAVHLYEWAVGSLPGVTVASTPSALTASLYADRYCGGTKATSLIMYVTRGSTFSRPLTSKDTHSPRGDLLVAHSSSARASHHVAQLAKQTASVLALSEGSAAPPTVPLPPSFTFGTDLMLPVGANADLRDLFASKGDKAAFQQAVQTLAGLD--DLAAVPQALAALQYSRQPEGVWFLDPQAWISEYLFKEVSIWDIPLVKPRFTCAVDPALLRNHDSAGPTRGGRSSFEVAQVLQDGLDFFSKGGTCSNGQIDFRP 1012          
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: A0A6H5JSN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN3_9PHAE)

HSP 1 Score: 627 bits (1618), Expect = 4.310e-198
Identity = 450/1199 (37.53%), Postives = 589/1199 (49.12%), Query Frame = 1
Query:   64 QQRLGVIVPAHRGDLDRAVSSLGRWPAKCSPVTQKNVDIVLYYAEGEEDTAAA-AAMPKIVDSAGRCFADTRLVYANLSEEEDIYPKGPSVQFYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDE---CSVASWRATATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIE--KWQGNDNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCESDDRICDSSXXXG---EPYGDLGCNA-EDGTYGLFCR----ACYNDETEALAADSAENRAIMCATGE-PVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKCKNGCESDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRMC--YNDETEA-----LAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRETRSGRRSRNGRATTTASPSTCKNGCE-------------------------------SDDRICD-----SSCATGEPYGDLGCNAEDGTYGLFCRICYNDETEALAA-------DSAEN---------RAIMCATGEPVTQ------YATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGND----NSEPKYVWIMRSSKLQASVPCGIHFHYDDSIPR------------DRYPSRQCATGEPVTQY----ATRQLRAVD----NTFDPATETPSF-------DLEAFISVSANTSLTNDIVRGDICAFISGGMNEVEQADVTAQSILEFVPGVRVVIAAEAGSKPAYES------------------------------AAGLYPSVSVFDASSARTASLFADEYCG-EGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSDARTSYRDFEIARATSAVLGFKAPSFTHGADLMLPVGANKDLREELTMGIDSGLTDKDAAALAALESYDVSSVPQLLAALAYSKSTPGVWFVNPQAWVTEHLFKTASIWDVPLVKPRFTCTIERSLYSSQASAENAELLTKNLDFFQKGGLCENGVI 3234
            QQRL V+VPA++GDLDRAV+SLGRWP  CS VTQ+NVD+VLYYAEGEED A   AA   + +SAGRCFA T  VYA+LSEE+D+YP+GPSV FYKMFLDE +R+   EYDALAI+EWDVLVATD+SFE+LY AAF   E+FWVKGSNLEGTNFH ++  +DMWHVLGHINGNAIY N D  F E+VDYTRSRW Y YPYDVALW TISDFPYSWPL+QRFS KFVTTNLI+ VG  HVD G V DA+A  +LFIHG  VDE    SV        TR++    K +    RK+Q  +EN+ WKT E   W   + +                             V R L    D        +   KN  ++ +   + S       + Y      A +DG      +    A  + + +    ++  N +   A  E     Y  R+L A     AP  AR+LQ WR                +        + D     S  AT           EDG      R    + D  ++        ++A N++      E    Y  R+L       AP  AR+LQ WR+      ++     TT + S  K   E                               ++D + +     S   T E    +    ++  Y         D +    A       D++ N               +G  VT+      Y  R L A     AP  AR+LQ WR           Q ++    NS  K   + R  +  A     +    D S P+            +     +  T E  T      A R+L+A D    NT     ETP+        ++ +F  + +     +D+ RG +CAF++G  ++V++ +VT  S+LEFVPG+RV +AAEA +  AYE                               A G  P VSV    S  TAS FADEYCG   T LIFY++TGSV+SR+FTSKDTHSP+GDLLVV+          ++A  T+ VLGF+AP FT G D++LPVGAN +LR  L    +  + D   A     +  D ++VPQ+LAAL Y ++ PG+WF NPQ WVT HLF+ ASIW++PLVKPRFTC ++ S  SS    + A++L +NLDFF  GG CE GVI
Sbjct:   38 QQRLAVVVPAYKGDLDRAVASLGRWPTDCSSVTQRNVDLVLYYAEGEEDAAPVDAATTALAESAGRCFAKTLTVYAHLSEEDDVYPRGPSVMFYKMFLDERIRSNFSEYDALAILEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNKDQAFVEYVDYTRSRWEYNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHGKNVDEGSNLSVQKVNEANGTRKNGGASKVV----RKVQNRKENEMWKTSEGKNWHTTEATTNESGAKMARELQEDAYDRRRLTATQDGKVARKLQKWRDA-------NKSGKNKWQTSETTTNESGARELQEDAYDRRRLTATQDGKVARKLQKWRDASKSGKNKRHTTEATTNESGTKAARELQEDAYDRRRLTATVDGSAPKVARKLQKWRDANKSGKNKWQTSETTTNESGARELQEDAYDRRSLTAT-----------EDGGAAKVARKLQKWRDANKSGKNKWQTFETATNKSGARELQEDA--YDRRRLTTTDDGSAPKVARKLQKWRDVNKSAMNKRPTFETTTNESGTKAARELQEDAYDRRRLTATVDGSAPKVARKLQKWRIANDNVLENKWQSSETTTNESGTKVTRELQEDAYDRRSLTATKDGSAPSVARKLQKWRDASNNLLENKWQTSETTTNNSGTKVTRELQEDAYDRRSLTATKDGSAPSVARKLQKWRDASNNLLENKWQTSETTTNNSGTK---VTRELQEDAYDRRSLTATEDGSAPKVARKLQKWRDVNNNSAKNKGQTSETTTNESGAKAKRELQATDSEDVNTLRRVLETPTTAASADRDEVSSFFEMESKRPFVDDVERGRLCAFVAGTASQVDEIEVTVSSVLEFVPGMRVAVAAEADAVDAYERCDSMISRLAAFWVARDHYTINRFVANPFRRAVGGLPGVSVSSTQSVFTASFFADEYCGVANTTLIFYLKTGSVVSRSFTSKDTHSPQGDLLVVFGKGHHG----DVADRTTDVLGFEAPPFTTGTDVILPVGANAELRAALAS--EKTVDDAVGAIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTSHLFQDASIWEIPLVKPRFTCELDPS--SSADEFDVADILQRNLDFFAMGGTCEAGVI 1201          
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE)

HSP 1 Score: 545 bits (1404), Expect = 1.470e-171
Identity = 398/982 (40.53%), Postives = 505/982 (51.43%), Query Frame = 1
Query:  337 FYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDECSVASWRATATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIEKWQGNDNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCESDDRICDSSXXXGEPYGDLGCNAEDGTYGLFCRACYNDETEALAADSAENRAIM------CATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKCKNGCESDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRETRSGRRSRNGRATTTASPSTCKNGCESDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRICYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKYVWIMRSSKLQASVPCGIHFHYD-DSIPRDRYPSRQCATGEPVTQYATRQLRAVDNTFDPATETPSFDLEAFISVSANTSLTNDIVRGDICAFISGGMNEVEQADVTAQSILEFVPGVRVVIAAEAGSKPAYESAAGLYPSVSVFDASSARTASLFADEYCGEGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSDARTSYRDFEIARATSAVLGFKAPSFTHGADLMLPVGANKDLREELTMGIDSGLT-DKDAAALAALES---YD-VSSVPQLLAALAYSKSTPGVWFVNPQAWVTEHLFKTASIWDVPLVKPRFTCTIERSLYSSQASAENAELLTKNLDFFQKGGLCENGVIFANP 3246
            FY MFLDEDVR+ L EYDAL+IIEWDVLVA+D SFE+LY AAF   E+FWVKGSNLEGT+FH TA +++MW VLGHINGNAIY N+D  F E+V+YTR+RWGY++PYDVALW TISDFPYSWPL+QR+S KFV TNL+ NV                               AS+RATA    +L   +P    SRKL       KWK  EKW+  ++   XXXXXXXXXXXXXXXXXXXXXX                                         XXX       GCNA+ G YG  CR CYN   +AL  DS +NRAIM      C+T  PV  Y  R++ A    +A   AR L   +              D S P  +   E   ++      T  P       A++           ND+                  GE              S+D            ++ S     + R T T+     K+G +   R+CDS+C+T   YG  GC A+ G YG  CR+CYN+   AL  DS +NRAIMC+T  PV  Y  R                                  +D  +P     +R +K+  +   G  +  D D +   R+                         F+ A E P F                D+ R ++CAF+ G + E    +VT +SIL+F+PG+RV IAAE+    AYE + G  P  ++    ++ TA+LFAD+YCG GT LI YVE GSV+SR FTSKDTHSPRGDLLVV++ +  SY D ++   +++VLGF APSFTHG DLMLP+G N+ LRE L   + + L  D D A+L ALE    +D VS++PQ+LAALAYS+ TPGVWFV+PQAWV ++LFK ASIWDVPLVKPR+ C I  +      S   A +L  NLDFF KGG C NG+I   P
Sbjct:    2 FYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLVGNV-------------------------------ASFRATAAAAVALKKPEPAQQSSRKLTSV---PKWKKAEKWRNGNDDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCNAKQGIYGADCRVCYNSVDKALKQDSPDNRAIMYDAVVVCSTVMPVDVY-HRRMSAADEGEASRVARRLAALKE-------------DASSPAEE--VELAVKVDQDRKLTSVPRW----KAKEKW------RTANDDGIXXXXXXXXXXXXKXXGGEXXXXXXXXXXXXNGSSD------------DSSSSDPGCSSRCTYTS-----KDGTKG--RVCDSNCSTPNVYGTKGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTMMPVDVYGRR-------------------------------LSASDEGDP-----LRVAKMIEAEEVGDEWSVDVDRVKAIRF-------------------------FEEAAERPFFQ---------------DLKRHNLCAFVGGRVGEEAMWEVTVKSILQFMPGMRVAIAAESEGLDAYERSLGGLPGAAISSTQNSATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSPGSYHDSQLRSRSASVLGFDAPSFTHGTDLMLPMGTNQALRESLGFRLGASLQHDGDGASLIALEELVGFDRVSALPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYMCAIAPAQLEP-GSPNTANVLQSNLDFFSKGGKCANGLIDIMP 827          
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI)

HSP 1 Score: 562 bits (1448), Expect = 3.740e-168
Identity = 349/773 (45.15%), Postives = 441/773 (57.05%), Query Frame = 1
Query:   40 DNAVKSPSQQRLGVIVPAHRGDLDRAVSSLGRWPAKCSPVTQKNVDIVLYYAEGEEDTAAAAAMPKIVDSAGRCFADTRLVYANLSEEEDIYPKGPSVQFYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDECSVASWRAT--------ATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIEKWQGNDNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCE--SDD----RICDSSXXXGEPYGDLGCNAEDGTYGLFCRACYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEAS-------------ADAPHT--ARELQPWRXXXXXXXXXXX----------QGNDNSEPK-CKNGCE--SDD----RICDSSCATGEPYGDLGCNAEDGTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEA-------------SADAPHT--ARELQPWR-----------------------------ETRSGRRSRNGRATTTASPSTCKNGCE--SDD----RICDSSCATGEPYGDLGCNAEDGTYGLFCRICYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEAS 2070
            D+ +K P QQRLGV+VPA+ GDL RAVSSL RWPAKCSP+T +N D+VLYYAE EE +A A+A+  I  +AGRCF+ TR+VYANL+EE+DIYP+GPSV FY MFLDE VR+ L  YDAL+IIEWDVLVA+D SFE+LY AAF   E+FWVKGSNLEGT+FH  A + +MWHVLGHINGNAIY N+D  F E+V+YTR+RWGY++PYDVALW TISDFPYSWPL+QR+S KFV TNLIS+VGYEHV+   V+DAVA  +LFIHGS VDE +VAS+ AT        AT++R L +  P               KW+  EKW+       XXXXXX                       +    S D           C +GCE  S D    R+CDS+      YG LGC A++G YG  CRACYND+ +A   D+  NRAIMC+T  PV  Y  R   A+ S              D  H   + ++  WR         XX          Q  D+S+ + C +GCE  S D    R+CDS+C++   YG LGC A++G YG  CR CYND+ +A   D+  NRAIMC+T  PV  Y  R   A+                D  H   + ++  WR                              TR+ R  ++  +    +   C +GCE  S D    R+CDS+C++   YG LGC A++G YG  CR CYND+ +A   D+  NRAIMC+T  PV  Y  R   A+ S
Sbjct:   21 DHDLKDPQQQRLGVVVPAYDGDLARAVSSLERWPAKCSPLTLENADLVLYYAE-EESSATASALESISSTAGRCFSRTRIVYANLAEEDDIYPQGPSVMFYNMFLDESVRSSLSGYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAVAGKTLFIHGSSVDEGNVASYEATEGDAAVDVATSQRQLTEDVP---------------KWQAQEKWRNTSXXXXXXXXXXK----------------------KQYEDSSD--------EEGCMDGCEYTSKDGTRGRVCDSNCSSPNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPVDVYGRRLTPADESNPLLVARDLEALQKDEVHRQLSEDVPKWRAQEKWKNNTXXXXXXXXXXXKQYEDSSDEEGCMDGCEYTSKDGTRGRVCDSNCSSSNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPVDVYGRRLTTADEVNPLLVARDLEALQKDEEHRQLSEDVPKWRAQEKWKNNTVPKCVFPSEDVEAQPEVEGSSTRTLRMRKDCSSFLFFTHDRCMDGCEYTSKDGTRGRVCDSNCSSSNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPVDVYGRRLTPADES 747          
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE)

HSP 1 Score: 535 bits (1377), Expect = 4.470e-162
Identity = 385/1083 (35.55%), Postives = 491/1083 (45.34%), Query Frame = 1
Query:   28 DERSDNAVKSPSQQRLGVIVPAHRGDLDRAVSSLGRWPAKCSPVTQKNVDIVLYYAEGEEDTAAAAAMPKIVDSAGRCFADTRLVYANLSEEEDIYPKGPSVQFYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDECSVASWRATATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIEKWQGNDNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCESDDRICDSSXXXGEPYGDLGCNAED-GTYGLFCRACYNDETEALAADS--AENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKCKNGCESDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRETRSGRRSRNGRATTTASPSTCKNGCE-SDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRICYNDETEALAADSAENR----AIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKYVWIMRSSKLQASVPCGIHFHYDDSIPRDRYPSRQCATGEPVTQYATRQLRAVDNTFDPATETPSFDLEAFISVSANTSLTNDIVRGDICAFISGGMNEVEQADVTAQSILEFVPGVRVVIAAEAGSKPAYESAAGLYPSVSVFDASSART-ASLFADEYCGEGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSDA-RTSYRDFEIARATSAVLGFKAPSFTHGADLMLPVGANKDLREELTMGIDSGLT----DKDAAALAALESYDVSSVPQLLAALAYSKSTPGVWFVNPQAWVTEHLFKTASIWDVPLVKPRFTCTIERSLYSSQASAENAELLTKNLDFFQKGGLCENGVI 3234
            +E  +  V++   +RL V+VPAH GDL +A++SL  WP  C   T  N  ++LYYA GE+D  AA  +P +  + GRCFA+TRLV ANLS+EE++YPKGPSVQFYK++LD +VR QL+EYDALAIIEWDV+VA D SFEKLY AAF   E FW+KGS LEG NFH T    +  HVLGHINGNAIY N D  F EFV+YT +RW Y   YDVALWATISDFPYSWPLWQRFS KFV  +LI+NVG++ +D+ AV  AVAS +LFIHGS+          + A       D  P      K +P                                           +         P S  V    L +           DR C S    G  +G   C A D   YG  CR C+ D  EA AA+   AE             Q A R    +   D   + R L+               G + +    + G   D R              L  N   G  G+  RM   D  +    D            E V                P T                             C N C+   D +CD SC TG  YGD  C      YG  CR C+ND  EAL A++   R     IMC T EP T+                                                                                                  D  +DPA                N     DI RG ICAF++G  + +++ +VT +SI++F+PG+RV IA +      ++ + G  P V + +A S  T A L AD +CG+GTKL+FY+  G ++SR FTSKDTHS  GDLLVVY++  R        A AT +VLGF +PSF+ G D+MLPV  N  LRE L    D G T    D+++ A+ AL  +    VP++LAALAYS + PG+WF+NPQ WVT H+F+ ASIWD+PLVKPRF C  + S+ +     + A  L  +L  F  G  CE G I
Sbjct:  109 EEEKNGMVRAEPARRLAVVVPAHAGDLGKALTSLATWPTTCHSSTLVNAHLILYYAGGEDDDVAAV-LPALAQTGGRCFANTRLVLANLSQEENVYPKGPSVQFYKLYLDSNVRRQLIEYDALAIIEWDVIVAHDTSFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKA-----DSSPALRFLGKNRP-----------------------------------------GERCTASCGGGAPPSSGVGAGALATVC---------DRSCYSGGELGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEEE-----------QAAMRGRSFKMPVDNEKSRRVLRA------------DDGPEGAAGWVEGGEGGDSRAV------------LRGNRGGGA-GVTRRM---DAVDGGTDD------------EMVEXXXXXXXXXXXXXXXPATG----------------------------CSNKCQMKTDTVCDRSCGTGR-YGDYNCGWRG--YGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTEX-----------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTPYDPA----------------NEPYLKDITRGQICAFMTGFSSFLKETEVTVKSIVQFMPGMRVAIATQDHDVSVFKRSLGNLPGVVISEAISPITLAPLLADRHCGKGTKLVFYMNPGELLSRKFTSKDTHSAAGDLLVVYAEVGRVGEASARRALATMSVLGFSSPSFSFGMDIMLPVHTNGQLRELLLS--DPGATGKGLDRESQAVHALGKFSGVFVPEVLAALAYSLNEPGLWFINPQQWVTHHMFQQASIWDIPLVKPRFGCAFDISMAAQ--GYDVAAALETHLGHFMSGSACERGFI 980          
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: D8LLE5_ECTSI (Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI)

HSP 1 Score: 492 bits (1267), Expect = 1.740e-153
Identity = 355/983 (36.11%), Postives = 449/983 (45.68%), Query Frame = 1
Query:  337 FYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDE---CSVASWRATATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIE--KWQGNDNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCESDDRICDSSXXXGEPYGDLGCNAEDGTYGLFCRACYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKCKNGCESDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRETRSGRRSRNGRATTTASPSTCKNGCESDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRICYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKYVWIMRSSKLQASVPCGIHFHYDDSIPRDRYPSRQCATGEPVTQYATRQLRAVDNTFDPATETPSF-------DLEAFISVSANTSLTNDIVRGDICAFISGGMNEVEQADVTAQSILEFVPGVRVVIAAEAGSKPAYESAAGLYPSVSVFDASSARTASLFADEYCG-EGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSDARTSYRDFEIARATSAVLGFKAPSFTHGADLMLPVGANKDLREELTMGIDSGLTDKDAAALAALESYDVSSVPQLLAALAYSKSTPGVWFVNPQAWVTEHLFKTASIWDVPLVKPRFTCTIERSLYSSQASAENAELLTKNLDFFQKGGLCENGVIFANP 3246
            FYK+FLDE +R+   EYDALAIIEWDVLVATD+SFE+LY AAF   E+FWVKGSNLEGTNFH ++  +DMWHVLGHINGNAIY NND  F E+VDYTR+RW   YPYDVALW TISDFPYSWPL+QRFS KFVTTNLI+ VG  HVD G V DA+A  +LFIHG  VDE    SV        T ++    K +    RKLQ W+EN+KWKT E  KW+ ++                          +    VP+                                                                  L ADS +              Y  R+L A     AP  AR+LQ WR              D ++   KN  E+                                            ++A+N ++                        P  AR LQ   E    RR    R T T   S  + G +                                              +AE        GE            E    AP  AR+LQ WR              +    K  W    +    SVP          + R+       A  E V  Y  R+L           ETP+F       ++  F  + +      D+ R  +CAF++G  ++V+Q +VT  S+LEFVPG+RVV+AAE  +  AYE A G  P VSV    S  TAS FADEYCG   T LI+Y++TGSV+SR+FTSKDTHSP+GDLLVV+    +     ++A  T+ VLGF+AP FT G DL+LPVGAN DLR  L    +  + D   A     +  D ++VPQ+LAAL Y ++ PG+WF NPQ WVT HLF+TASIW++PLVKPRFTC ++    SS   ++ A++L +NLDFF  GG CE GVI   P
Sbjct:    2 FYKLFLDERIRSNFSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNNDQAFVEYVDYTRARWEDNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHGKNVDEGSNLSVEKVNEANGTGKNGGASKVV----RKLQNWKENEKWKTFEEPKWETSET-------------------------RTNENVPKA--------------------------------------------------------------ARKLQADSED-------------VYDRRRLTATQDGSAPKVARKLQKWR--------------DANKESGKNKWET-------------------------------------------TETAKNESV------------------------PKAARRLQADSEDVYDRR----RLTATQDGSAPEGGSQ----------------------------------------------AAEVEGRQQGVGE------------EQDGSAPKVARKLQKWRDA------------NKESGKNKWETTETAKDESVP---------KVSRELQ-----ADSEDV--YTRRRL----------VETPTFAASADRVEVSRFFEMESVRPFAEDVERNRVCAFVAGTASQVDQIEVTVSSVLEFVPGMRVVVAAEVDAVDAYERAVGGLPGVSVSSTQSVFTASFFADEYCGVANTTLIYYLKTGSVVSRSFTSKDTHSPQGDLLVVFGKGHSG----DLADRTANVLGFEAPPFTTGTDLILPVGANADLRAALAS--EKTVNDAVGAIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTNHLFQTASIWEIPLVKPRFTCELDH--VSSADESDVADILQRNLDFFAMGGTCERGVIAMQP 691          
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Match: A0A6H5JHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL7_9PHAE)

HSP 1 Score: 476 bits (1225), Expect = 5.220e-146
Identity = 367/959 (38.27%), Postives = 480/959 (50.05%), Query Frame = 1
Query:  310 IYPKGPSVQFYKMFLDEDVRAQLVEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVTAASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWATISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHGSMVDECSVASWRATATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIEKWQGN--DNSEPXXXXXXXXXXXXXXXXXXXXXXKYKTLVPRMLPHSHDVILSCLCSSSRCKNGCE------SDDRICDSSXXXGEPYGDLGCNAEDGTYGLFCRACYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKCKNGCESDDRICDSSCATGEPYGDLGCNAEDGTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRE-TRSGRRSRNGRATTTASP---STCKNGCESDDRICDSSCATG--------------------------------------------------------------EPYGDLGCNAEDGTYGLFCRICYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRXXXXXXXXXXXQGNDNSEPKYVWIMRSSKLQASVPCGIHFHYDDSIPRDRYPSRQCATGEPVTQYATRQLRAVDNTFDPATETPSFDLEAFISVSANTSLTNDIVRGDICAFISGGMNEVEQADVTAQSILEFVPGVRVVIAAEAGSKPAYESAAGLYPSVSVFDASSARTASLFADEYCGEGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSDARTSYRDFEIARATSAVLGFKAPSFTHGADLMLPVGANKDLREELTMGIDSGLT-DKDAAALAALE 2961
            +YPKGPSV FY MFLDE+VR+ L EYDAL+ +EWDVLVA+D SFE+LY AA    E+FWVKGS LEGT+FH +A +++MW VLGHINGNAIY N+D  F E+V+YTR+RWGY++PYDVALW TISDFPYSWPL+QR+S KF+ TNL+ +        G VA   A+ S                 ATAT          +A Q+R  +      KWKT EKW+ +  D+   XXXXXXXXXXXXXXXXXXXXXX +K                   S   C + CE      +  R+CD++    + YG   CNA+ GTYG   RAC+ND  +A   D+ ENRAIMC                  S+   +T+R+                +G                R+CD++C+T + YG   CNA+ GTYG   R C+ND  +A   D+ ENRAIMC+T  PV  Y  R+L  +  +D    AR L+  +E T S  + +  R  + ++P   S  K     DD I      +G                                                                    GCNA+ GTYG   R C+ND  +A   D+ ENRAIMC+T  PV  Y                 R L P               +D S P     +R +K+         F  +DS              E        +L  VD   +        D+ +F   +A    + D+ R ++CAF+SG + E    +VT + IL+F+PG+RV IAAEA     YE + G  P V+V    +  TASLFAD+YCG G  LI YV+ GS +SR FTSKDTHSPRGDLLVV++  + SY D ++ R + +VLGF APSFT G DLMLPVGAN+DLRE L +   + L  D D A++ AL+
Sbjct:    1 MYPKGPSVMFYNMFLDENVRSSLSEYDALSTVEWDVLVASDNSFEELYHAALRVNEEFWVKGSKLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFIVTNLVGD--------GNVASKAAAAST----------------ATATA--------DVAKQTRGRKLSGNTPKWKTQEKWRTSKDDSLXXXXXXXXXXXXXXXXXXXXXXXXXWKNKF----------------SDGACSSSCEYTSRDGTRGRVCDANCSTPDVYGTRECNAKQGTYGEERRACFNDVDKARKQDTPENRAIMC------------------SSSCEYTSRD--------------GTRG----------------RVCDANCSTPDVYGTRECNAKQGTYGEERRACFNDVDKAREQDTPENRAIMCSTKRPVEGYG-RRLTPDDESDPLRIARSLETLQEDTSSPLQEQEHRQLSGSTPKRRSQEKWRTRKDDSIPKCVFRSGGSASRWKXXXXXXXXXXDKAPKXXXXXXXXXXXXXXXXXXXXXYTSXXXXXXXXXXXXXXXXXXXXXRGCNAKQGTYGEERRACFNDVDKARKQDTPENRAIMCSTVMPVDVY----------------GRRLTP---------------DDGSRP-----LREAKI---------FSVEDS--------------EEEADGVEGELANVDVDRE--------DVISFFEEAAKRPYSQDLKRRNLCAFVSGRVGEETMWEVTVKIILQFMPGMRVAIAAEAEGLDTYERSMGGRPGVTVSGTQNLATASLFADQYCGAGAALILYVKPGSDLSRFFTSKDTHSPRGDLLVVHTGFQGSYHDAQLRRRSVSVLGFDAPSFTDGTDLMLPVGANEDLRESLGLRHGASLQHDGDGASMVALQ 795          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.22.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LJP6_9PHAE2.000e-26144.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI63_ECTSI4.200e-24136.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI39_ECTSI5.650e-22537.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FR80_ECTSI2.780e-20642.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSN3_9PHAE4.310e-19837.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4M7_9PHAE1.470e-17140.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI37_ECTSI3.740e-16845.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZV7_9PHAE4.470e-16235.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LLE5_ECTSI1.740e-15336.11Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JHL7_9PHAE5.220e-14638.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:204604..217776 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FI63
Model size4526
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons14
Evalue7.29e-219
EggNOG OGs2D0G2@1|root,2SE3H@2759|Eukaryota
Cds size3021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.22.3prot_A-nodosum_M_contig113.22.3Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig113 204832..216499 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866529.6801443-UTR-A-nodosum_M_contig113:204603..2048311680866529.6801443-UTR-A-nodosum_M_contig113:204603..204831Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig113 204604..204831 +
1680866529.9174771-UTR-A-nodosum_M_contig113:216499..2177761680866529.9174771-UTR-A-nodosum_M_contig113:216499..217776Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig113 216500..217776 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866529.692162-CDS-A-nodosum_M_contig113:204831..2049061680866529.692162-CDS-A-nodosum_M_contig113:204831..204906Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 204832..204906 +
1680866529.7139678-CDS-A-nodosum_M_contig113:206281..2067251680866529.7139678-CDS-A-nodosum_M_contig113:206281..206725Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 206282..206725 +
1680866529.7262113-CDS-A-nodosum_M_contig113:207175..2073201680866529.7262113-CDS-A-nodosum_M_contig113:207175..207320Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 207176..207320 +
1680866529.7341046-CDS-A-nodosum_M_contig113:208307..2084161680866529.7341046-CDS-A-nodosum_M_contig113:208307..208416Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 208308..208416 +
1680866529.7469008-CDS-A-nodosum_M_contig113:208683..2087641680866529.7469008-CDS-A-nodosum_M_contig113:208683..208764Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 208684..208764 +
1680866529.755201-CDS-A-nodosum_M_contig113:208877..2091171680866529.755201-CDS-A-nodosum_M_contig113:208877..209117Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 208878..209117 +
1680866529.7669067-CDS-A-nodosum_M_contig113:209249..2094111680866529.7669067-CDS-A-nodosum_M_contig113:209249..209411Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 209250..209411 +
1680866529.7757473-CDS-A-nodosum_M_contig113:209932..2101121680866529.7757473-CDS-A-nodosum_M_contig113:209932..210112Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 209933..210112 +
1680866529.7912643-CDS-A-nodosum_M_contig113:210244..2104091680866529.7912643-CDS-A-nodosum_M_contig113:210244..210409Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 210245..210409 +
1680866529.800165-CDS-A-nodosum_M_contig113:212913..2130931680866529.800165-CDS-A-nodosum_M_contig113:212913..213093Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 212914..213093 +
1680866529.8107226-CDS-A-nodosum_M_contig113:213225..2134131680866529.8107226-CDS-A-nodosum_M_contig113:213225..213413Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 213226..213413 +
1680866529.81968-CDS-A-nodosum_M_contig113:213771..2138501680866529.81968-CDS-A-nodosum_M_contig113:213771..213850Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 213772..213850 +
1680866529.8289323-CDS-A-nodosum_M_contig113:215218..2155121680866529.8289323-CDS-A-nodosum_M_contig113:215218..215512Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 215219..215512 +
1680866529.8942387-CDS-A-nodosum_M_contig113:215820..2164991680866529.8942387-CDS-A-nodosum_M_contig113:215820..216499Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 215821..216499 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig113.22.3

>prot_A-nodosum_M_contig113.22.3 ID=prot_A-nodosum_M_contig113.22.3|Name=mRNA_A-nodosum_M_contig113.22.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1007bp
MPKIVDSAGRCFADTRLVYANLSEEEDIYPKGPSVQFYKMFLDEDVRAQL
VEYDALAIIEWDVLVATDQSFEKLYEAAFDSTEDFWVKGSNLEGTNFHVT
AASNDMWHVLGHINGNAIYKNNDSGFTEFVDYTRSRWGYKYPYDVALWAT
ISDFPYSWPLWQRFSPKFVTTNLISNVGYEHVDKGAVADAVASGSLFIHG
SMVDECSVASWRATATTRRSLLDVKPIAAQSRKLQPWRENQKWKTIEKWQ
GNDNSEPKWKTSQKWQGNDDTVPKWRRTNKYKTLVPRMLPHSHDVILSCL
CSSSRCKNGCESDDRICDSSCETGEPYGDLGCNAEDGTYGLFCRACYNDE
TEALAADSAENRAIMCATGEPVTQYATRQLRAEASADAPHTARELQPWRE
NQKWKTIEKWQGNDNSEPKCKNGCESDDRICDSSCATGEPYGDLGCNAED
GTYGLFCRMCYNDETEALAADSAENRAIMCATGEPVTQYATRQLRAEASA
DAPHTARELQPWRETRSGRRSRNGRATTTASPSTCKNGCESDDRICDSSC
ATGEPYGDLGCNAEDGTYGLFCRICYNDETEALAADSAENRAIMCATGEP
VTQYATRQLRAEASADAPHTARELQPWRENQKWKTIEKWQGNDNSEPKYV
WIMRSSKLQASVPCGIHFHYDDSIPRDRYPSRQCATGEPVTQYATRQLRA
VDNTFDPATETPSFDLEAFISVSANTSLTNDIVRGDICAFISGGMNEVEQ
ADVTAQSILEFVPGVRVVIAAEAGSKPAYESAAGLYPSVSVFDASSARTA
SLFADEYCGEGTKLIFYVETGSVISRTFTSKDTHSPRGDLLVVYSDARTS
YRDFEIARATSAVLGFKAPSFTHGADLMLPVGANKDLREELTMGIDSGLT
DKDAAALAALESYDVSSVPQLLAALAYSKSTPGVWFVNPQAWVTEHLFKT
ASIWDVPLVKPRFTCTIERSLYSSQASAENAELLTKNLDFFQKGGLCENG
VIFANP*
back to top

mRNA from alignment at A-nodosum_M_contig113:204604..217776+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig113.22.3 ID=mRNA_A-nodosum_M_contig113.22.3|Name=mRNA_A-nodosum_M_contig113.22.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=13173bp|location=Sequence derived from alignment at A-nodosum_M_contig113:204604..217776+ (Ascophyllum nodosum dioecious)
TTAACATGCGCTGCTGCTGCGGCAGCTGATGAACGCTCTGACAACGCTGT AAAGAGTCCTTCCCAGCAACGTCTTGGTGTGATTGTCCCCGCCCACCGCG GGGATCTCGACCGCGCCGTTTCGTCTCTTGGCCGTTGGCCCGCGAAATGC TCCCCAGTGACGCAGAAGAACGTGGACATCGTCCTCTACTACGCGGAAGG AGAGGAAGACACCGCCGCGGCAGCTGCAATGCCCAAGATCGTCGACTCCG CCGGACGTTGCTTCGCCGACACGAGACTCGTCTACGCAAACCTGTCCGAA GAAGTGAGAATTGGACGGGCGGAATCACGTTTCATCTCTATGTTTTACTG TTCTGTTGTGTATTTTCTTGCGGGATTGCAAGGGTTCGTAGACGGTGACC GCATCATCAGGGATGATGCCTTTTCCAATACTACTGCGATGATGCTCGTC GTGGGCTCTTCACCGCGCAACGTTGACCGAAGAAAACGTCTGTAGTATCA CGTTGTCGTCAAACTGATACTCTCGAGTAATAGCCCTGAGCGTTGTAACA CGAGAGGAGCAATGTAGAGTTAGGGCACACGCGAGGGTTCGTATAATAAT ACCCCTACCTAACGATGACGACAGCGTGCGGTTTCTTTCGGTTCTTTTCT AAACCTTGTTCGGAGATAAACTCGCGTGCATCTCGCGCGCTTGCCGTTTA AGTGAATTCGGAATCATCGCGGAAGCTGTGCAACAATAATAACGATCCGT TTTCCAAACATCCGTCAGCATGGTCAACCATCCAAACAGCTCGATATATT GCTGGTGACGCGTGGTGCATTTTTCTGTGATTCGGCGAAAAAGCGGGCGT TGAATGCCCCCCCCCCCTCCCCCCAATCCCCCCGCCCGTGAAGAAGTATT CCAGCAGAGTTTGTTATTCGAAAAAAACGATTCTTGTATTCAAGAACTTG CCGCGATTTTTTCGGGTCTCGCCTCCGCGATGACCCAAGCAAATGCCCAC AGACGTTTGCTCCTACGACCACCGCGCCACTCACTCACAGATTGCCTCTT CTTTGGTATGCTCTGGTATAATAGCGGCGGGCGGCTTGAAGTATAGCGTC AAGCCGTTACTTATCGTGCTCGATTCATTACACTCGAAGAGTGAACATGC TCTGTTTTTGTATGTTGAACCACCTTCCTTTCACGTCAAGATGAGAGTGT AACATAATATTATGTTGTTGTTGGTTCTTCCGAACTCTTGAGAGCTAGCT CAATAAAACCTGTATCCTGTTTTTTTTTCTGCATAAAGGTTCTCTCTTAC ACACACACCCGCACTTAGCCGAGAATGACTTGACCCCGCCTGCGTCGTGT TCAGCCCCGCGACTCGCTTAATGTCTCGCAAAAAAATACCCTAAAAAAAT GTGAAAACGATGAGAGGAAGCTAGAATCTATGACAAAGCTATTAAATAAA GTGTAAGGCACATGCTGCGCCCACCCTCTCGTAGCGCGGCGACAGAACGT AGTATAGTGGCGTTGGACGACCAAGACCATTTTTTTTTCGATCGCGCGAA CAATTACTACGGCGCGGATGCAGATCTGGGGACGATGCTATTTATCATAT CATACCTGCAAGTTTATATAACGCTGTTTTTTTGTTCGTATTGTGTGCTT GAATGCTCTTCGGTGAACCCGTCTTCAGGAGGACATCTATCCCAAGGGGC CGTCCGTGCAGTTCTACAAGATGTTCCTCGACGAGGACGTTCGAGCGCAG CTCGTGGAGTACGACGCGCTGGCCATCATCGAGTGGGACGTACTCGTAGC GACAGATCAGTCCTTCGAAAAGCTCTACGAGGCCGCCTTCGACTCCACCG AGGACTTCTGGGTGAAGGGTAGCAACCTCGAGGGCACCAACTTCCACGTC ACCGCAGCATCCAACGATATGTGGCACGTACTCGGCCACATCAACGGCAA CGCTATCTACAAGAATAACGATTCAGGCTTCACCGAGTTCGTTGACTACA CGCGCTCACGCTGGGGGTATAAATACCCGTACGACGTCGCGCTGTGGGCT ACCATCTCAGACTTTCCATACAGCTGGCCCCTTTGGCAGCGCTTCTCCCC CAAATTCGTCACCACCAACCTGGTGAGATACTTCGCCAGGCGCTTACTCC AGTGATATGAAGTTGGGGGTAGTCCGAGACGTATCTATTCGTGATCGCCT GGGCATGGTAGTAGCTATTCGGGGCGGGAATAACTTTCCTAAGCGAACAT CATTTGCAGAGCGCTCATCATGAAGTATGTGTTGAGTACGGAACGTTAAC TTACTCTATAATGTTCCAAGTATCGATGCTTTGGTCGCCTTCGAAAGCCA AAGAACATTTCAGAACCTAAGCGCCAGACAAAAGTGATATTACAGGCTAT TCATAGAATGGGTGAAAGCTTTTTTTTATTCTATAGGATAGCATATTATA TCATCAACAACAACAACGTAGAATGGGCACATCGATATCCTCATCATGAG AAGTTGAGACTCCTGATCACGGTCAATTTTTTCCTGTAAAATCGCGGCCC ACGCTTTTGAACACTCCCTTAGATCTCAAACGTCGGCTACGAGCATGTCG ACAAGGGAGCCGTCGCTGATGCCGTCGCCAGCGGAAGCCTCTTCATTCAC GGCAGCATGGTTGACGAGTGCAGCGTGGCTTCTTGGCGGGCCACCGCCAC CACTCGCCGCTCGCTTCGTGTGAAAGCAGACGAAAGGAAGGAACTCGCGT GCACAACTGCATGCGGAAAAGTTGGGGCAGGACTCCCTGTAGGCGCCTCC ACCGTGTGTGACGCCACCTGTGCTAAAGGCGGCCGCTTCGACGGCTACCT GTGCGGTGCCGGAAGTTCGATCAAGTTTGGTGCCATGTGCCGCCTGTGCT TCAATGACGTCGAGGAGGCTCGTAAGGCTGAAAGCAGGCTCAAGAACGGC AAGCACGTTATCATGTGCGACACCATGCGTCCACCGGCTGCAGTCGACTG CAGCGACGAGTGTACCATCAAGAAAGACACGGTGAGAATGCCACAGCACT TCACCCCGCTTTCGTGGCCTTGCGCGCGTCAACCCCCCAACGAGAAGAGT TCACTTAACAAACGCATAGAGAAACAATCACACCATCGGTTCAATGGAGA ACTTTGTCTCTCCTCGGACAGTTGGATATTGGAGATACTCACATGATGAA CAACGTGTATCCTGTATATTTTTCCACATCCTTCTCTTCAACAACGGTCT AGGTCTGCGACGAGGCGTGCGGCACCGGCTTGTACGGCGACTACAACTGT AACTGGAGGAATCTCGGTGCTAAATGTCGCTCCTGCTTCGATGACGCGGA AGCGGCGCTTGAGGCTGACGAGGTTGCCAAGCGCCACGGCGGTCGTGTCA TCATGTGTGACACGTGAGTGCCCTTCGAAAAATGTCTTACTTGGTGTCAA ACGTAGTACGTAAGACAAGGTAGCTCTTCGACTCTTACCCAACGACTACT ATTTTATCCGTCGATCAAAGGATGGTGGTCAGATGTATTCATTATTGTGG TGCGTCCCGTCGTAAAAGGGCTCGGATAAGAGCATTTCACCTATTCCCAA ACGTCAAATGAAGTTATGAGCACTCCTAACTCAGCAGACAAACGTCGGCT CTGTCACTTTCAACCCCCCCAACATTTGCAGCCACGAACCTCCGAACGTA TCAGTAGACGTAAAACCCATCGCTGCCCAGTCTCGGAAGCTCCAGCCGTG GAGGGAAAACCAGAAGTGGAAGACGATCGAGAAATGGCAGGGCAACGACA ACAGCGAGCCCAAGTACGTATGGATCATGCGATCTTCGAGTAACGTGGCG GTGGGCTTTGTCTGACGCCATTGCGCTCCATTCTACATGTATATATATTT CCGATACTGTATATCCGGGACATATTAGGCATGGCACGTCGACTACACGC GGTCGGGTCAGACATCCCTTATACGGTGGTCGTGACCAAGGTCTCGATGT CAGGGTCCATACCCCGGTTGGGCTTAAGCACACACTGTACTCCCCTTCGC CCCACCGTGGTCGTCTGTTCTTGCACATAGGTGGAAGACCAGCCAGAAGT GGCAGGGTAACGACGACACCGTGCCCAAGTGGAGGAGAACGAACAAGTAC AAGACCCTAGTGTGAGTTCCGCCCACGATTTGCCCACACCGCAGAGCTCC AAGCAAGCGTTCCATGTGGTATTCACTTTCATTATGATGATTCAATACCG CGCGACAGATGTCCATCTCGGCAGTCCTCGGATGCTCCCTCACTCTCATG ACGTTATACTGTCTTGCCTCTGCTCGTCCTCTAGGTGCAAAAACGGCTGT GAGTCCGACGACCGCATCTGCGACTCCTCTTGCGAAACCGGCGAGCCGTA CGGAGACCTCGGCTGTAACGCCGAGGACGGCACTTATGGACTCTTCTGTC GCGCCTGCTACAACGATGAAACTGAAGCTCTGGCCGCAGACAGCGCCGAG AACCGCGCGATTATGTGAGAGAAGAAACGCGTTGCGGATCTTCCGACAAC CGACAGGAGAGGTGCCGCATCTTCCGAAATGCTAAAATATGCTTGACCTA CACTGATGACGATCCCGCCGTCCACCTTCTTCCGTACATGTAATAGGTGT GCTACAGGGGAGCCCGTGACCCAGTACGCTACCCGCCAACTTCGTGCCGA AGCTTCCGCAGACGCGCCTCACACCGCTCGCGAGCTCCAGCCGTGGAGGG AAAACCAGAAGTGGAAGACGATCGAGAAATGGCAGGGCAACGACAACAGC GAGCCCAAGTACGTATGGATCATGCGATCTTCGAGTAACGTGGCGGTGGG CTTTGTCTGACGCCATTGCGCTCCATTCTACCTGTATATATATTTCCGAT ACTGTATATCCGGGACATATTAGGCATGGCACGTCGACTACACGCGGTCG GGTCAAACATCCTTTATACGGTGGTCGTGACCAAGGTCTCGATGTCAGGG TCTATACCCCGGTTGGGCTTGAGCACCCACTGTCCTCCCCTTCGCCCCAC CGTGGTCGTCTGTTCTTGCACATAGGTGGAAGACCAGCCAGAAGTGGCAG GGTAACGACGACACCGTGCCCAAGTGGAGGAGAACGAACAAGTACAAGAC CCTAGTGTGAGTTCCGCCCACGATTTGCCCACACCGCAGAGCTCCAAGCA AGCGTTCCATGTGGTATTCACTTTCATTATGATGATTCAATACCGCGCGG CAGATATCCATCTCGGCAGTCCTCGGGTGCTCCCTCACTCTCATGACGTT ATACTGTCTTGCCTCTGCTCGTCCTCTAGGTGCAAAAACGGCTGTGAGTC CGACGACCGCATCTGCGACTCCTCTTGCGCAACCGGCGAGCCGTACGGAG ACCTCGGCTGTAACGCCGAGGACGGCACTTATGGACTCTTCTGTCGCATG TGCTACAACGATGAAACTGAAGCTCTGGCCGCAGACAGCGCCGAGAACCG CGCGATTATGTGAGAGAAGAAACGCGTTGCGGATCTTCCGATAACCGACA GGAGAGATGCCGCATCTTCCGAAATGCCAAAAGATGTTTGACCTACACTG ATGACGACCCCGCCGTCCACTTTCTTCCGTACATGTAATAGGTGTGCTAC AGGGGAGCCCGTGACCCAGTACGCTACCCGCCAACTTCGTGCCGAAGCTT CCGCAGACGCGCCTCACACCGCTCGCGAGCTCCAGCCGTGGAGGGAAACC AGAAGTGGAAGACGATCGAGAAATGGCAGGGCAACGACAACAGCGAGCCC AAGTACGTATGGATCATGCGATCTTCGAGTAACGTGGCGGTGGGCTTTGT CTGACGCCATTGCGCTCCATTCTACCTGTATATATATTTCCGATACTGTA TATCCGGGACATATTAGGCATGGCACGTCGACTACACGCGGTCGGGTCAA ACATCCTTTATACGGTGGTCGTGACCAAGGTCTCGATGTCAGGGTCTATA CCCCGGTTGGGCTTGAGCACCCACTGTCCTCCCCTTCGCCCCACCGTGGT CGTCTGTTCTTGCACATAGGTGGAAGACCAGCCAGAAGTGGCAGGGTAAC GACGACACCGTGCCCAAGTGGAGGAGAACGAACAAGTACAAGACCTAGTG TGAGTTCCGCCCACGATTTGCCCACACCGCAGAGCTCCAAGCAAGCGTTC CATGTGGTATTCACTTTCATTATGATGATTCAATACCGCGCGGCAGATGT CCATCTCGGCAGTCCTCGGGTGCTCCCTCACTCTCATGACGTTATACTGT CTTGCCTCTGCTCGTCCTCTAGGTGCAAAAACGGCTGTGAGTCCGACGAC CGCATCTGCGACTCCTCTTGCGCAACCGGCGAGCCGTACGGAGACCTCGG CTGTAACGCCGAGGACGGCACTTATGGACTCTTCTGTCGCATGTGCTACA ACGATGAAACTGAAGCTCTGGCCGCAGACAGCGCCGAGAACCGCGCGATT ATGTGAGAGAAGAAACGTGTTGCGGATCTTCCGATAACCGACAGGAGAGA TGCCGCATCTTCCGAAATGCCAAAAGATGTTTGACCTACACTGATGACGA TCCCGCCGTCCATCTTCTTCCGTACATGTAATAGGTGTGCTACAGGGGAG CCCGTGACCCAGTACGCTACCCGCCAACTTCGTGCCGAAGCTTCCAGACG CGCCTCACACCGCTCGCGAGCTCCAGCCGTGGAGGGAAAACCAGAAGTGG AAGACGATCGAGAAATGGCAGGGCAACGACAACAGCGAGCCCAAGTACGT ATGGATCATGCGATCTTCGAGTAACGTGGCGGTGGGCTTTGTCTGACGCC ATTGCGCTCCATTCTACCTGTATATATATTTCCGATACTGTATATCCGGG ACATATTAGGCATGGCACGTCGACTACACGCGGTCGGGTCAGACATCCCT GATACGGTGGTCATGACCGAGGTCTCGATGTCAGGGTCCATACCCCGGTT GGGCTTAAGCACACACTGTCCTCCCCTTCGCCCCACCGTGGTCGTCTGTT CTTGCACATAGGTGGAAGACCAGCCAGAAGTGGCAGGGTAACGACGACAC CGTGCCCAAGTGGAGGAGAACGAACAAGTACAAGACCCTAGTGTGAGTTC CGCCCACGATTTGCCCACACCGCAGAGCTCCAAGCAAGCGTTCCATGTGG TATTCACTTTCATTATGATGATTCAATACCGCGCGGCAGATATCCATCTC GGCAGTCCTCGGGTGCTCCCTCACTCTCATGACGTTATACTGTCTTGCCT CTGCTCGTCCTCTAGGTGCAAAAACGGCTGTGAGTCCGACGACCGCATCT GCGACTCCTCTTGCGCAACCGGCGAGCCGTACGGAGACCTCGGCTGTAAC GCCGAGGACGGCACTTATGGACTCTTCTGTCGCACCTGCTACAACGATGA AACTGAAGCTCTGGCCGCAGACAGCGCCGAGAACCGCGCGATTATGTGAG AGAAGAAACGTGTTGCGGATCTTCCGATAACCGACAGGAGAGATGCCGCA TCTTCCGAAATGCCAAAATATGTTTGACCTACACTGATGACGATCCCGCC GTCCATCTTCTTCCGTACATGTAATAGGTGTGCTACAGGGGAGCCCGTGA CCCAGTACGCTACCCGCCAACTTCGTGCCGAAGCTTCCGCAGACGCGCCT CACACCGCTCGCGAGCTCCAGCCGTGGAGGGAAAACCAGAAGTGGAAGAC GATCGAGAAATGGCAGGGCAACGACAACAGCGAGCCCAAGTACGTATGGA TCATGCGATCTTCGAGTAACGTGGCGGTGGGCTTTGTCTGACGCCATTGC GCTCCATTCTACCTGTATATATATTTCCGATACTGTATATCCGGGACATA TTAGGCATGGCACGTCGACTACACGCGGTCGGGTCAGACATCCCTTATAC GGTGGTCGTGACCAAGGTCTCGATGTCAGGGTCCATACCCCGGTTGGGCT TGAGCACCCACTGTCCTCCCCTTCGCCCCACCGTGGTCGTCTGTTCTTGC ACATAGGTGGAAGACCAGCCAGAAGTGGCAGGGTAACGACGACACCGTGC CCAAGTGGAGGAGAACGAACAAGTACAAGACCCTAGTGTGAGTTCCGCCC ACAATTTGCCCACACCGCAGAGCTCCAAGCAAGCGTTCCATGTGGTATTC ACTTTCATTATGATGATTCAATACCGCGCGGCAGATATCCATCTCGGCAG TCCTCGGGTGCTCCCTCACTCTCATGACGTTATACTGTCTTGCCTCTGCT CGTCCTCTAGGTGCAAAAACGGCTGTGAGTCCGACGACCGCATCTGCGAC TCCTCTTGCGCAACCGGCGAGCCGTACGGAGACCTCGGCTGTAACGCCGA GGACGGCACTTATGGACTCTTCTGTCGCATCTGCTACAACGATGAAACTG AAGCTCTGGCCGCAGACAGCGCCGAGAACCGCGCGATTATGTGAGAGAAG AAACGCGTTGCGGATCTTCCGACAACCGACAGGAGAGGCGCCGTATCTTC CGAAATGCCAAAAGATGCTTGACTTACACTGATGACGATCCCGCCGTCCA CCTTCTTCCGTACATGTAATAGGTGTGCTACAGGGGAGCCCGTGACCCAG TACGCTACCCGCCAACTTCGTGCCGAAGCTTCCGCAGACGCGCCTCACAC CGCTCGCGAGCTCCAGCCGTGGAGGGAAAACCAGAAGTGGAAGACGATCG AGAAATGGCAGGGCAACGACAACAGCGAGCCCAAGTACGTATGGATCATG CGATCTTCGAGTAACGTGGCGGTGGGCTTTGTCTGACGCCATTGCGCTCC ATTCTTCTACCTGTATATATATTTCCGATACTGTATATCCGGGACATATT AGGCATGGCACGTCGACTACACGCGGTCGGGTAGAGTATCCCTGATACGG TGGTCATGACCGAGGTCCCGATGTCAGGGTCCATACCCCGGTTGGGCTTG AGCACCCACTGTCCTACCCTTCGCCCCACCGTGGTCGTCTGTTCTTGCAC ATAGGTGGAAGACCAGCCAGAAGTGGCAGGGTGACGACGACACCGTGCCC AAGTGGAGGAGAACGAACAAGTACAAGACCCTAGTGTGAGTTCCGCCCAC GATTTGCCCACACCGCAGAGCTCCAAGCAAGCGTTCCATGTGGTATTCAC TTTCATTATGATGATTCAATACCGCGTGACAGATATCCATCTCGGCAGTC CTCGGGTGCTCCCTCACTCTCATGACGTTATACTGTCTTGCCTCTGCTCG TCCTCTAGGTGCAAAAACGGCTGTGAGTCCGACGACCGCATCTGCGACTC CTCTTGCGCAACCGGCGAGCCGTACGGAGACCTCGGCTGTAACGCCGAGG ACGGCACTTATGGACTCTTCTGTCGCGCCTGCTACAACGATGAAACTGAA GCTCTGGCCGCAGACAGCGCCGAGAACCGCGCGATTATGTGAGAGAAGAA ACGCGTTGCGGATCTTCCGACAACCGACAGGAGAGGTGCCGCATCTTCCG AAATGCCAAAAGATGTTTGACTTACACTGATGACGATCCCGCCGTCCACC TTCTTCCGTACATGTAATAGGTGTGCTACAGGGGAGCCCGTGACCCAGTA CGCTACCCGCCAACTTCGTGCCGAAGCTTCCGCAGACGCGCCTCACACCG CTCGCGAGCTCCAGCCGTGGAGGGAAAACCAGAAGTGGAAGACGATCGAG AAATGGCAGGGCAACGACAACAGCGAGCCCAAGTACGTATGGATCATGTG ATCTTCGAGTAACATGGCGGTGGGCTTTGTCTGACGCCATTGCGCTCCAT TCTACCTGTATATATATTTCCGATACTGTATATCCGGGACATATTAGGCA TGGCACGTCGACTACACGCGGTCGGGTCAGACATCCCTGATACGGTGGTC GTGACCAAGGTCTCGATGTCAGGGTCCATACCCCGGTTGGGCTTGAGCAC CCACTGTCCTCCCCTTCGCCCCACCGTGGTCGTCTGTTCTTGCACATAGG TGGAAGACCAGCCAGAAGTGGCAGGGTGACGACGACACCGTGCCCAAGTG GAGGAGAACGAACAAGTACAAGACCCTAGTGTGAGTTCCGCCCACGATTT GCCCACACCGCAGAGCTCCAAGCAAGCGTTCCATGTGGTATTCACTTTCA TTATGATGATTCAATACCGCGCGACAGATGTCCATCTCGGCAGTCCTCGG GTGCTCCCTCACTCTCATGACGTTATACTGTCTTGCCTCTGCTCGTCCTC TAGGTGCAAAAACGGCTGTGAGTCCGACGACCGCATCTGCGACTCCTCTT GCGCAACCGGCGAGCCGTACGGAGACCTCGGCTGTAACGCCGAGGACGGC ACTTATGGACTCTTCTGTCGCACCTGCTACAACGATGAAAATGAAGCTCT GGCCGCAGACAGCGCCGAGAACCGCGCGATTATGTGAGAGAAGAAACGCG TTGCGGATCTTCCGACAACCGACAGGGGAGGTGCCGTATCTTCCGAAATG CCAAACGATGTTTGACCTACACTGATGACGATCCCGCCGTCCATCTTCTT CCGTACATGTAATAGGTGTGCTACAGGGGAGCCCGTGACCCAGTACGCTA CCCGCCAACTCCGTGCCGTGGACAACACCTTCGACCCCGCCACAGAAACG CCTTCGTTCGATCTTGAAGCGTTTATATCCGTTTCTGCGAACACTTCTCT TACGAATGACATCGTGCGTGGGGATATTTGTGCTTTCATCTCTGGTGGCA TGAACGAGGTTGAGCAGGCTGACGTGACAGCGCAAAGTATCCTTGAGTTT GTGCCTGGAGTCCGAGTTGTTATCGCAGCTGAAGCCGGAAGCAAGCCCGC TTACGAGAGGTGAGAGTTGAAACACGAACGAAGTGTCGGTTTTCTTGAGA AGCAAACAATTCCTTATTTCCTTTGGTCTTGTTCGCGAGCCTTCACGGAC ATAAGATTATTATTTTTTTCCCCATCTTTGCTTTCCTAAGAGTTTACAAG GTTGTGCTGGCGGAAAGCATCCTTGTTATTCTCTCACGACACTATTTCTA ACTTGGAACCCTATACACTCGGGAGACATAAGAGATATTACTTCCCTTTT GTTTCTGTGCCCTCACGTTTACCTTCATTTTTTTCACCCATCGCTTTTGG GCTTACGTTACTCACAGCGCGGCTGGACTCTATCCCAGCGTCAGCGTATT TGATGCGTCGTCTGCTCGTACGGCGAGCCTTTTTGCCGATGAGTACTGTG GTGAGGGCACAAAACTCATCTTCTACGTTGAGACGGGATCCGTGATCTCC CGAACCTTCACATCCAAGGACACACACTCCCCTCGCGGCGACCTCCTCGT CGTCTACAGCGACGCAAGGACGAGTTACCGTGACTTTGAAATCGCACGGG CAACCTCGGCGGTGCTTGGATTTAAAGCCCCGTCATTCACGCACGGTGCC GACCTCATGTTGCCCGTGGGAGCCAACAAGGATCTGAGGGAGGAGCTCAC GATGGGGATTGATAGTGGCTTGACTGACAAAGACGCCGCTGCTCTGGCCG CACTCGAGTCCTACGATGTCAGCTCTGTACCACAGCTACTAGCGGCTCTA GCGTACTCTAAGAGCACGCCTGGAGTGTGGTTTGTCAACCCGCAAGCGTG GGTCACCGAGCACCTGTTTAAGACGGCGTCGATCTGGGACGTACCATTGG TGAAGCCGCGTTTCACGTGTACCATCGAACGGTCACTCTACAGCTCCCAG GCGAGTGCAGAAAACGCCGAGTTGTTAACGAAAAACCTCGACTTCTTCCA GAAGGGCGGTTTATGCGAGAACGGAGTAATATTCGCTAACCCGTAAATGT AAACATAAGTGGGTTATTTCGGGTTTTGAGTTTGCGGAAATATATCATGA GAGCATACATTTTGACGGAGGTACGTAGACTCTTGGTCTTTCGGTTGTGT TTACCACTTCGGCTGGTGTTGTTTTCTCGTACTTACGGAGACCGTTGATC AATACCTGGGTGGATGGAAGTATATGGCGTCTGTATAGTGCCGTAGACGG GTATTCACGTCGCGGGGAAATTATCCTTACAGTAGAAACGACCCATCATG GTTGGTCGTTGCTTCAAACTTTGTGATCCATTTTTGCTGGTCACCGTCCC GAGAAGACTTGAAAGGGATTTGGGTGATGACCCCCTTAGGCGCAATGTCT AACGTTTTTAAGTGTATCGGGAGATTTTTTTGGGCGTTCGTGTACGTAGG ATGCGAATATCTTTACCGACTTTCAGTTTTTTGTTGGTTAGGTTCGGATG TTGGGATAAACCTCCCTATTTTATTTTGCTTTGATAGTCGTGATGTGCAT TCGCTCCCGGTGAAACCAGCTAGTTGTACGAGTGCCTGTACTTGCTCCGA GTTCCAGACAGAGTGATACGTGATACCTTCATGTATTTACGACTGTTTTG AACCTCATTGGAACGCGGTGTACTATTAGACTTTCAACGTGATGTTTCAA AAGAGCGGTGGAATAGACTAGTGATTACGTACACTCCTCTGGTGCTGTAT TCTAGCCGCGATGATTAACGATAATGTACATGATTGATGATACTTCACCC GTCCTAGCTGTGCACGTTGTCGTCCAACGTAAACGTGCCGCAGGCATGCA TAATGTTATATGTAAGCAAAGCAGAACGGATAAGCAACTCGTTGCCATTG TCCTGGCGTACGCTAGCGTGGTAGTCAAGCTGGGACTTTTTGAACTCCGA GCGTCCCTCGCGCCGTGAATGACGTAGAGTCCCAGTTCGTGTCACACGCA TTTATGGTTTTTGCTCTCTGATTTTAGCTAAAAGTAGAAGGAAAGGGAGT TACTTGCCGCCCGAGGGGCAGAGAAGGAAGTTGTGGCAGTCATTGGGCCC GCTTTACTTGGGACCTCGGCTGGCTTGGATTGGCTCTAGCCGCCGATCAG ATTAAGAAACCGGGAAGCTATTACTGTATCTTTACTCGTAGCGTGTGAAG CTTTAGGTTTGTCTTAAGAGTATACCAGCGGTAGTACAGGCAACTCGAGG CCAAGAATGGTACCCAGCTGAGCCAAATTATCAAATGTCGACAAGATTAG TCGACTAACATCCACCGAAGGGA
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig113:204604..217776+

>mRNA_A-nodosum_M_contig113.22.3 ID=mRNA_A-nodosum_M_contig113.22.3|Name=mRNA_A-nodosum_M_contig113.22.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=3021bp|location=Sequence derived from alignment at A-nodosum_M_contig113:204604..217776+ (Ascophyllum nodosum dioecious)
ATGCCCAAGATCGTCGACTCCGCCGGACGTTGCTTCGCCGACACGAGACT
CGTCTACGCAAACCTGTCCGAAGAAGAGGACATCTATCCCAAGGGGCCGT
CCGTGCAGTTCTACAAGATGTTCCTCGACGAGGACGTTCGAGCGCAGCTC
GTGGAGTACGACGCGCTGGCCATCATCGAGTGGGACGTACTCGTAGCGAC
AGATCAGTCCTTCGAAAAGCTCTACGAGGCCGCCTTCGACTCCACCGAGG
ACTTCTGGGTGAAGGGTAGCAACCTCGAGGGCACCAACTTCCACGTCACC
GCAGCATCCAACGATATGTGGCACGTACTCGGCCACATCAACGGCAACGC
TATCTACAAGAATAACGATTCAGGCTTCACCGAGTTCGTTGACTACACGC
GCTCACGCTGGGGGTATAAATACCCGTACGACGTCGCGCTGTGGGCTACC
ATCTCAGACTTTCCATACAGCTGGCCCCTTTGGCAGCGCTTCTCCCCCAA
ATTCGTCACCACCAACCTGATCTCAAACGTCGGCTACGAGCATGTCGACA
AGGGAGCCGTCGCTGATGCCGTCGCCAGCGGAAGCCTCTTCATTCACGGC
AGCATGGTTGACGAGTGCAGCGTGGCTTCTTGGCGGGCCACCGCCACCAC
TCGCCGCTCGCTTCTAGACGTAAAACCCATCGCTGCCCAGTCTCGGAAGC
TCCAGCCGTGGAGGGAAAACCAGAAGTGGAAGACGATCGAGAAATGGCAG
GGCAACGACAACAGCGAGCCCAAGTGGAAGACCAGCCAGAAGTGGCAGGG
TAACGACGACACCGTGCCCAAGTGGAGGAGAACGAACAAGTACAAGACCC
TAGTTCCTCGGATGCTCCCTCACTCTCATGACGTTATACTGTCTTGCCTC
TGCTCGTCCTCTAGGTGCAAAAACGGCTGTGAGTCCGACGACCGCATCTG
CGACTCCTCTTGCGAAACCGGCGAGCCGTACGGAGACCTCGGCTGTAACG
CCGAGGACGGCACTTATGGACTCTTCTGTCGCGCCTGCTACAACGATGAA
ACTGAAGCTCTGGCCGCAGACAGCGCCGAGAACCGCGCGATTATGTGTGC
TACAGGGGAGCCCGTGACCCAGTACGCTACCCGCCAACTTCGTGCCGAAG
CTTCCGCAGACGCGCCTCACACCGCTCGCGAGCTCCAGCCGTGGAGGGAA
AACCAGAAGTGGAAGACGATCGAGAAATGGCAGGGCAACGACAACAGCGA
GCCCAAGTGCAAAAACGGCTGTGAGTCCGACGACCGCATCTGCGACTCCT
CTTGCGCAACCGGCGAGCCGTACGGAGACCTCGGCTGTAACGCCGAGGAC
GGCACTTATGGACTCTTCTGTCGCATGTGCTACAACGATGAAACTGAAGC
TCTGGCCGCAGACAGCGCCGAGAACCGCGCGATTATGTGTGCTACAGGGG
AGCCCGTGACCCAGTACGCTACCCGCCAACTTCGTGCCGAAGCTTCCGCA
GACGCGCCTCACACCGCTCGCGAGCTCCAGCCGTGGAGGGAAACCAGAAG
TGGAAGACGATCGAGAAATGGCAGGGCAACGACAACAGCGAGCCCAAGTA
CGTGCAAAAACGGCTGTGAGTCCGACGACCGCATCTGCGACTCCTCTTGC
GCAACCGGCGAGCCGTACGGAGACCTCGGCTGTAACGCCGAGGACGGCAC
TTATGGACTCTTCTGTCGCATCTGCTACAACGATGAAACTGAAGCTCTGG
CCGCAGACAGCGCCGAGAACCGCGCGATTATGTGTGCTACAGGGGAGCCC
GTGACCCAGTACGCTACCCGCCAACTTCGTGCCGAAGCTTCCGCAGACGC
GCCTCACACCGCTCGCGAGCTCCAGCCGTGGAGGGAAAACCAGAAGTGGA
AGACGATCGAGAAATGGCAGGGCAACGACAACAGCGAGCCCAAGTACGTA
TGGATCATGCGATCTTCGAAGCTCCAAGCAAGCGTTCCATGTGGTATTCA
CTTTCATTATGATGATTCAATACCGCGTGACAGATATCCATCTCGGCAGT
GTGCTACAGGGGAGCCCGTGACCCAGTACGCTACCCGCCAACTCCGTGCC
GTGGACAACACCTTCGACCCCGCCACAGAAACGCCTTCGTTCGATCTTGA
AGCGTTTATATCCGTTTCTGCGAACACTTCTCTTACGAATGACATCGTGC
GTGGGGATATTTGTGCTTTCATCTCTGGTGGCATGAACGAGGTTGAGCAG
GCTGACGTGACAGCGCAAAGTATCCTTGAGTTTGTGCCTGGAGTCCGAGT
TGTTATCGCAGCTGAAGCCGGAAGCAAGCCCGCTTACGAGAGCGCGGCTG
GACTCTATCCCAGCGTCAGCGTATTTGATGCGTCGTCTGCTCGTACGGCG
AGCCTTTTTGCCGATGAGTACTGTGGTGAGGGCACAAAACTCATCTTCTA
CGTTGAGACGGGATCCGTGATCTCCCGAACCTTCACATCCAAGGACACAC
ACTCCCCTCGCGGCGACCTCCTCGTCGTCTACAGCGACGCAAGGACGAGT
TACCGTGACTTTGAAATCGCACGGGCAACCTCGGCGGTGCTTGGATTTAA
AGCCCCGTCATTCACGCACGGTGCCGACCTCATGTTGCCCGTGGGAGCCA
ACAAGGATCTGAGGGAGGAGCTCACGATGGGGATTGATAGTGGCTTGACT
GACAAAGACGCCGCTGCTCTGGCCGCACTCGAGTCCTACGATGTCAGCTC
TGTACCACAGCTACTAGCGGCTCTAGCGTACTCTAAGAGCACGCCTGGAG
TGTGGTTTGTCAACCCGCAAGCGTGGGTCACCGAGCACCTGTTTAAGACG
GCGTCGATCTGGGACGTACCATTGGTGAAGCCGCGTTTCACGTGTACCAT
CGAACGGTCACTCTACAGCTCCCAGGCGAGTGCAGAAAACGCCGAGTTGT
TAACGAAAAACCTCGACTTCTTCCAGAAGGGCGGTTTATGCGAGAACGGA
GTAATATTCGCTAACCCGTAA
back to top