mRNA_A-nodosum_M_contig113.19.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: D7FLL0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL0_ECTSI) HSP 1 Score: 232 bits (591), Expect = 4.890e-66 Identity = 140/347 (40.35%), Postives = 193/347 (55.62%), Query Frame = 1
Query: 385 MVDFLIRKGADVDAPTINRPEEYTNTRSL--VYLNFEGERPLHVAT-YSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDI-MQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRILEHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAATPGCS 1413
+ LI +GA V+A N P T R + +L +GE H A ++ ++D+V LLLRAGA+P+A N G TPLM L W + ++ L++AG + VD EG+ HA G + IR +++ +P L + G SAL +A + ++V+ L S A H R D PL A++ GH+++V+ L S G + + LT A+ + K+L +L GEE+ +W+ D LAG LLHY+ G+I +SV LL AGAN A D+ GQR IDVI TMD +NPP SPL PR R RDPV EAEI RT+ R PA+ A SWAWP GCS
Sbjct: 10 IAQLLIERGAHVNAGVTN-PSMGTRERVVNSTFLPMQGENAFHAAICFAKKMDLVDLLLRAGADPSAGNKLGITPLMCLAREEP--PGPWLECALEVLIKAGVNPDQVDAEGWTAFLHAVEVGNPEKIRRILALSPAALGRIAWDGMSALYVACNEGHLSVVSCLLSLGAKHPRTTIRDHCPLAVAIIKGHEDIVKILLANLSAVGGVELAAEMALTCAITQSRGKILRMMLNITGEENAARWADSDWGLAGSLLHYSCGYILPASVSALLAAGANENATDQAGQRPIDVIGTMDLQNPPLSPLHPRTPTRFRDPVKEAEIRRTVERAPAFRARSWAWPAFEWAGCS 353
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE) HSP 1 Score: 157 bits (396), Expect = 3.140e-39 Identity = 110/321 (34.27%), Postives = 163/321 (50.78%), Query Frame = 1
Query: 256 KLVTEVRTGNTLRVEAMLNAGASVNGSEQLRPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRIL-EHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARD 1215
+L+ EV GN VE L+ GAS++G + +PL A G +V L ++GA+++A P + + R + Y+ G +H A Y+ RVD +R LL AGA+PNAA+ GHTPLM C G D + +++ LL+ GAD + G L +A D+I ++ A TLNQ G + L AA ++ L S A+ + + + L AV G + +VR L +G D +GGL P + A G +K+LH LL GEE +++W+ N LLH A LS + +L AGA+ ARD
Sbjct: 8 QLLVEVLKGNERGVEEQLDLGASLDGFDIWKPLFAAARHGRAGVVTLLAKRGAELEATC---PRDVRDDRGM-YVYSSGSPAVHAAVYARRVDSLRALLDAGADPNAADATGHTPLMQAC-RLFGAADRYV-VVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLDHGMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYN-ESTLLHCATSVGSLSVMSAILSAGADERARD 321
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE) HSP 1 Score: 163 bits (412), Expect = 4.560e-39 Identity = 150/448 (33.48%), Postives = 208/448 (46.43%), Query Frame = 1
Query: 115 SVVHESYRPFLRHALPTFTSHRESVTRRFSI-------SPSMSTGSASQQNENL--KLVTEVRTGNTLRVEAMLNAGASVNGSEQL--RPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPP-----LFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRI-LEHDSGPLTAAVVNGHKNVVRTL-TKYGSDPIGGLCVSPIVLTAAVCY--GQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAA 1398
SV +Y P + F S + S R S+ SP +T + S L +L+ +R N VE L AGASV+GS +L RP++ A G M D LI++ A+VD ++N + + L L +G R LHVA VD+ RLLL+AGA+P++AN G TPLM C +DS R +A++ L A A + D+I ++ AP TLN+ G + L AA + HL S A E D PL AAV H+ VVR L T G + I G V P + AA G++ ++ LL A G E + W+R P+LH A F +S+ ++LL AGA+ A + G+ A +V+ P +RDP + I R L RGPAY A SWAWP A
Sbjct: 65 SVRRRAYSPAGTASESMFNSGKSSALRLVSLHSCSLEPSPLSTTMARSVTKPQLAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLN---DLRCSDGLEVLG-KGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCI----LEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYK-EDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAP-------------SLQRDPAKKGAIVRMLARGPAYRARSWAWPATA 490
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 159 bits (403), Expect = 6.570e-38 Identity = 135/392 (34.44%), Postives = 187/392 (47.70%), Query Frame = 1
Query: 256 KLVTEVRTGNTLRVEAMLNAGASVNGSEQL--RPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPP-----LFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRI-LEHDSGPLTAAVVNGHKNVVRTL-TKYGSDPIGGLCVSPIVLTAAVCY--GQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAA 1398
+L+ +R N VE L AGASV+GS +L RP++ A M + LI++ ADVD ++N + + L L +G R LHVA VD+ RLLL+AGA+P++AN G TPLM C +DS R +A++ L A A + ++I ++ AP TLN+ G + L AA + HL S A E D PL AAV H+ VVR L T G IGG V P + AA G++ ++ LL A G E + W+R P+LH A F +S+ ++LL AGA+ A + G+ A +V+ P +RDP + I R L RGPAY A SWAWP A
Sbjct: 113 QLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLN---DLRCSDGLEVLG-KGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCI----LEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYK-EDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAP-------------SLQRDPAKKGAIVRMLERGPAYRARSWAWPATA 482
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A6H5JQQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ9_9PHAE) HSP 1 Score: 151 bits (382), Expect = 4.560e-37 Identity = 103/309 (33.33%), Postives = 145/309 (46.93%), Query Frame = 1
Query: 487 EGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRILEHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAATPGCS 1413
EG RPL +A + +I +LL+ GA+ NA G T + R ++ L++AG + VD EG+ HA G + IR +++ +P L + G AL +A + ++ + S H + D PL A++ GH+++ TL S G + + T A+ + K+L +L GEE+ GN LL AGAN A + GQR IDVI T+D +NPP S L PR R RDPV EAEI RT+ R PA+ AWSWAWP GCS
Sbjct: 16 EGCRPLVMAAVHAQTEIAQLLIERGAHVNA----GVTNASMGTRERSHRAPGLSGALEVLIKAGVNPDQVDAEGWTTFLHAVEVGNPEKIRRILALSPAALGRIAWDGMLALHVACNEGHLSAVSWPLSLGTKHPKTTSRDHCPLAVAIIKGHEDIANTLLANLSAVGGVELAAEMAPTYAITQSRGKILRMMLNITGEENAP-----GGNA-------------------LLAAGANENATGQGGQRPIDVIGTIDLQNPPLSRLHPRTPTRFRDPVKEAEIRRTVERAPAFRAWSWAWPAFEGAGCS 296
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A6H5L2Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE) HSP 1 Score: 147 bits (370), Expect = 8.660e-35 Identity = 142/437 (32.49%), Postives = 207/437 (47.37%), Query Frame = 1
Query: 256 KLVTEVRTGNTLRVEAMLNAGASVNGSE--QLRPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQR-----GSLGQSALLMAAKDSPVNVLQHLRS--ERATHRRILEHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLC-VSPIVLTAAVCYGQSKVLHFLLGAG-GEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAATPGCSNPFLKYSDHKERKRGRRKNRPGVRVLRQRTRKGFARAISR 1533
+L+ + G+ V+A + AGA +GS +LRPLM A G +V+FL++ GA+++ T + F G R H A SG++D + +LL+AGA +A N G T LM C T + + +ALL AGAD + D+EG L HA A G ++I ++ +L+++ + L A + + V + HL S RAT R E L AVV + +VR L + G + +GG V P L +A G++++L LL G G+ W+ Y GPLL+ AAG+ + V +LL AGA+ D Q A D+I + + A + D +A I RTL+RGPAY A SW WP A G + S H E K GV + R+R K R I R
Sbjct: 9 RLLRGAQKGDLPAVQAAIAAGADPSGSSNSRLRPLMVASGSGSVEVVNFLLQNGAEMEHQTWGDDDH----------RFLGMRATHWAVTSGKLDTLLVLLKAGAVYDAVNAQGETCLMNACM-TDASPPTCVAMAKALLDAGADPLIEDREGQVALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPLQSALESNQVQAVAHLLSLGARATVDR--EGRGNLLRRAVVKNSEPIVRVLFEAGLESVGGAARVMPDSLASAAKAGRTRLLKLLLTVGRGDRTTGYWANYYV-WGGPLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIGDL-------LASGSKSASFRSD---KAAIRRTLLRGPAYRARSWTWPPLAA-GADDAVAFPSGHPE------KVPLGVHIFRRRGEKLVVRLIGR 414
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: D8LMA9_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA9_ECTSI) HSP 1 Score: 121 bits (304), Expect = 1.120e-26 Identity = 108/333 (32.43%), Postives = 163/333 (48.95%), Query Frame = 1
Query: 304 MLNAGASVN--GSEQLRPLMTAVFFGLPTMVDFLIRKGADVDAPT-INRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWR-DIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMD--IIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRILEHDSGPLTA---AVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRY------DGNLAG--------------PLLHYAAGFIQLSSVKLLLVAGANPEARD 1215
ML GASV+ G +RP+ A +GL ++ L+ GAD +AP ++ + Y N G L++A G + +LL+ GANPNA + G TP+M C TG S + +M++LL+AGADL++ ++ G L A GR D ++ ++S AP TLN G + L AA+ + + L SE A+ L + +TA AV+ G VR L + G D +GGL + +V +G L LL GE+ Q+ W+++ D +L G P+LHYAA + ++ +LL AGA PE D
Sbjct: 1 MLEEGASVHDFGDAVVRPIAVATDYGLIDIIKALVATGADTEAPCWSDKDGAWKGNPEWSYRN--GFTALYIAPAVGNAGALLVLLQLGANPNATDSDGGTPIMVTCG--TGSVTSTKLTMMRSLLKAGADLAVENELG--GLAIHIAAGRCDAQVVALLLSMAPSTLNNATHNGLTPLAAAAEKGNESTMSLLFSEGASDS--LPWATTGITALHKAVIVGMGTSVRFLLENGLDAVGGLPGIAEAIRISVWFGCIDGLEMLLNVHGEKKQEFWAKHYVFGVQDDSLLGSVPFSITAILCEWYPILHYAAKHYSIPALHVLLSAGAIPETCD 325
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: D7FVG9_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG9_ECTSI) HSP 1 Score: 118 bits (296), Expect = 1.260e-25 Identity = 103/325 (31.69%), Postives = 150/325 (46.15%), Query Frame = 1
Query: 259 LVTEVRTGNTLRVEAMLNAGASVNGSEQLR--PLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWR-DIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRIL--------EHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAG-PLLHYAAGFIQLSSVKLLLVAGA 1197
L + V G+ R +A+L AGASV+GS +L PL A G M LI +GA +D + P + N + +G RP+H A SG+ + RLL+RAGA+PN AN+ G TPLM+ C R R I++ LL GAD ++VD + A GR+++I + + AP TL++ G G + L AA PL A+ H NVV L DPI +++A+ ++++L L+ A GEE +QK S + P+LH A + +LL AGA
Sbjct: 7 LFSSVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLD---LGAPRDVHNRLTGSLTMAKGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSAC--LVQRVGPHRASIVRELLDGGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHRAGRDGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLD-NLDPIKSSVDFGTAISSALVTKRARLLSRLVSAVGEERKQKKSLAGMTFSSSPILHIAVAQANPLTTSVLLAAGA 325
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: UPI001EE520B2 (protein fem-1 homolog A-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE520B2) HSP 1 Score: 86.7 bits (213), Expect = 4.110e-15 Identity = 69/260 (26.54%), Postives = 124/260 (47.69%), Query Frame = 1
Query: 316 GASVNGSEQLRPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAG-ANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRILEHDSGPLTAAVVNGHKNVVRTLT---KYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGE 1083
G + GS++ P+M A +G +V+FL+ GAD+ SLVY G LH+A + G +++ + ++ G N N+ TP+M +N +D+++ L++ GADLS V G L A GG +D++R +++ +N RG ++ +++AA+ +V++ L A +L + L A GH VV+ + K + G +P+++ AA G K++ FL+ G +
Sbjct: 35 GINSRGSKKKTPVMVAGRWGHKDVVEFLVELGADL---------------SLVYEG--GSSVLHLACFGGHLEVAKYIVSKGKVNINSRGWKKKTPVMVAAAN------GHKDVVEFLVEHGADLSRVYGGGSSTLHLASFGGHLDVVRYIVAQNKVNINSRGWKKKTPVMVAAEMGEKDVVEFLVEHGAYLSLLLASGNNILHLACKGGHLEVVKYIVSQNKVNINSRGWKKKTPVMVAAA--NGHQKLVEFLIRKGAD 269
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A067MLJ7_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MLJ7_9AGAM) HSP 1 Score: 83.2 bits (204), Expect = 1.180e-13 Identity = 81/287 (28.22%), Postives = 133/287 (46.34%), Query Frame = 1
Query: 427 PTINRPEEYTNTRSLVYLNFEGERP----LHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGR---DDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVI-SNAPHTLNQRGSLGQSALLMAAKDSP--VNVLQHLRSERATHRRILEHDSGPLTAAVVNGHKNVVRTLTKYGSDP-----IGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDV 1242
P + + E N V E E P LH A Y G + +LLL GA+PNA + P+ + + +++ D++++LL AGAD+ D +G PL AY GR +RA++ + A +++ ++ +P V+ ++ + A + L A G + VR L G+DP + LC + +++ + G K + LL AG + D + YD PL H A+ S+V+LLL +GA+P+ R+R GQRA+ V
Sbjct: 7 PELEKLEHTLNAGKAVEAR-ESEWPHRTRLHRALYDGDLARAKLLLGFGADPNAQDADSQRPMHIVTESDHMAFVDEETRADMIESLLAAGADMDAKDDDGDTPLSLAYREGRPYCVRALVDAGADPSISGEWGAPTPTFVVELIRNPDGAEVVANVLAAGAGVNAKDDRGYTLLDRAAFCGSPSAVRALLDAGADPNVETNLPSLCSAAVLMKSD---GGEKAVVALLSAGADVDMHSF--YDKRGPSPL-HGASERGYASTVRLLLESGADPDLRNRGGQRALHV 286 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig113.19.1 >prot_A-nodosum_M_contig113.19.1 ID=prot_A-nodosum_M_contig113.19.1|Name=mRNA_A-nodosum_M_contig113.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=491bp MNSLSLHSYHPSVVHESYRPFLRHALPTFTSHRESVTRRFSISPSMSTGSback to top mRNA from alignment at A-nodosum_M_contig113:141686..144160- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig113.19.1 ID=mRNA_A-nodosum_M_contig113.19.1|Name=mRNA_A-nodosum_M_contig113.19.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2475bp|location=Sequence derived from alignment at A-nodosum_M_contig113:141686..144160- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig113:141686..144160- >mRNA_A-nodosum_M_contig113.19.1 ID=mRNA_A-nodosum_M_contig113.19.1|Name=mRNA_A-nodosum_M_contig113.19.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1473bp|location=Sequence derived from alignment at A-nodosum_M_contig113:141686..144160- (Ascophyllum nodosum dioecious)back to top |