mRNA_A-nodosum_M_contig113.19.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig113.19.1
Unique NamemRNA_A-nodosum_M_contig113.19.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: D7FLL0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL0_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 4.890e-66
Identity = 140/347 (40.35%), Postives = 193/347 (55.62%), Query Frame = 1
Query:  385 MVDFLIRKGADVDAPTINRPEEYTNTRSL--VYLNFEGERPLHVAT-YSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDI-MQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRILEHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAATPGCS 1413
            +   LI +GA V+A   N P   T  R +   +L  +GE   H A  ++ ++D+V LLLRAGA+P+A N  G TPLM L          W +  ++ L++AG +   VD EG+    HA   G  + IR +++ +P  L +    G SAL +A  +  ++V+  L S  A H R    D  PL  A++ GH+++V+ L    S   G    + + LT A+   + K+L  +L   GEE+  +W+  D  LAG LLHY+ G+I  +SV  LL AGAN  A D+ GQR IDVI TMD +NPP SPL PR   R RDPV EAEI RT+ R PA+ A SWAWP     GCS
Sbjct:   10 IAQLLIERGAHVNAGVTN-PSMGTRERVVNSTFLPMQGENAFHAAICFAKKMDLVDLLLRAGADPSAGNKLGITPLMCLAREEP--PGPWLECALEVLIKAGVNPDQVDAEGWTAFLHAVEVGNPEKIRRILALSPAALGRIAWDGMSALYVACNEGHLSVVSCLLSLGAKHPRTTIRDHCPLAVAIIKGHEDIVKILLANLSAVGGVELAAEMALTCAITQSRGKILRMMLNITGEENAARWADSDWGLAGSLLHYSCGYILPASVSALLAAGANENATDQAGQRPIDVIGTMDLQNPPLSPLHPRTPTRFRDPVKEAEIRRTVERAPAFRARSWAWPAFEWAGCS 353          
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 3.140e-39
Identity = 110/321 (34.27%), Postives = 163/321 (50.78%), Query Frame = 1
Query:  256 KLVTEVRTGNTLRVEAMLNAGASVNGSEQLRPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRIL-EHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARD 1215
            +L+ EV  GN   VE  L+ GAS++G +  +PL  A   G   +V  L ++GA+++A     P +  + R + Y+   G   +H A Y+ RVD +R LL AGA+PNAA+  GHTPLM  C    G  D +  +++ LL+ GAD +     G   L +A      D+I  ++  A  TLNQ    G + L  AA       ++ L S  A+   +  +  +  L  AV  G + +VR L  +G D +GGL   P  +  A   G +K+LH LL   GEE +++W+    N    LLH A     LS +  +L AGA+  ARD
Sbjct:    8 QLLVEVLKGNERGVEEQLDLGASLDGFDIWKPLFAAARHGRAGVVTLLAKRGAELEATC---PRDVRDDRGM-YVYSSGSPAVHAAVYARRVDSLRALLDAGADPNAADATGHTPLMQAC-RLFGAADRYV-VVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLDHGMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYN-ESTLLHCATSVGSLSVMSAILSAGADERARD 321          
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.560e-39
Identity = 150/448 (33.48%), Postives = 208/448 (46.43%), Query Frame = 1
Query:  115 SVVHESYRPFLRHALPTFTSHRESVTRRFSI-------SPSMSTGSASQQNENL--KLVTEVRTGNTLRVEAMLNAGASVNGSEQL--RPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPP-----LFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRI-LEHDSGPLTAAVVNGHKNVVRTL-TKYGSDPIGGLCVSPIVLTAAVCY--GQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAA 1398
            SV   +Y P    +   F S + S  R  S+       SP  +T + S     L  +L+  +R  N   VE  L AGASV+GS +L  RP++ A   G   M D LI++ A+VD  ++N   +   +  L  L  +G R LHVA     VD+ RLLL+AGA+P++AN  G TPLM  C      +DS R   +A++                     L  A A  + D+I  ++  AP TLN+    G + L  AA       + HL S  A       E D  PL AAV   H+ VVR L T  G + I G  V P  + AA     G++ ++  LL A G E +  W+R       P+LH A  F  +S+ ++LL AGA+  A +  G+ A +V+    P               +RDP  +  I R L RGPAY A SWAWP  A
Sbjct:   65 SVRRRAYSPAGTASESMFNSGKSSALRLVSLHSCSLEPSPLSTTMARSVTKPQLAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLN---DLRCSDGLEVLG-KGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCI----LEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYK-EDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAP-------------SLQRDPAKKGAIVRMLARGPAYRARSWAWPATA 490          
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 6.570e-38
Identity = 135/392 (34.44%), Postives = 187/392 (47.70%), Query Frame = 1
Query:  256 KLVTEVRTGNTLRVEAMLNAGASVNGSEQL--RPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPP-----LFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRI-LEHDSGPLTAAVVNGHKNVVRTL-TKYGSDPIGGLCVSPIVLTAAVCY--GQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAA 1398
            +L+  +R  N   VE  L AGASV+GS +L  RP++ A       M + LI++ ADVD  ++N   +   +  L  L  +G R LHVA     VD+ RLLL+AGA+P++AN  G TPLM  C      +DS R   +A++                     L  A A  + ++I  ++  AP TLN+    G + L  AA       + HL S  A       E D  PL AAV   H+ VVR L T  G   IGG  V P  + AA     G++ ++  LL A G E +  W+R       P+LH A  F  +S+ ++LL AGA+  A +  G+ A +V+    P               +RDP  +  I R L RGPAY A SWAWP  A
Sbjct:  113 QLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLN---DLRCSDGLEVLG-KGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCI----LEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYK-EDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAP-------------SLQRDPAKKGAIVRMLERGPAYRARSWAWPATA 482          
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A6H5JQQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ9_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 4.560e-37
Identity = 103/309 (33.33%), Postives = 145/309 (46.93%), Query Frame = 1
Query:  487 EGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRILEHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAATPGCS 1413
            EG RPL +A    + +I +LL+  GA+ NA    G T         + R       ++ L++AG +   VD EG+    HA   G  + IR +++ +P  L +    G  AL +A  +  ++ +    S    H +    D  PL  A++ GH+++  TL    S   G    + +  T A+   + K+L  +L   GEE+        GN                    LL AGAN  A  + GQR IDVI T+D +NPP S L PR   R RDPV EAEI RT+ R PA+ AWSWAWP     GCS
Sbjct:   16 EGCRPLVMAAVHAQTEIAQLLIERGAHVNA----GVTNASMGTRERSHRAPGLSGALEVLIKAGVNPDQVDAEGWTTFLHAVEVGNPEKIRRILALSPAALGRIAWDGMLALHVACNEGHLSAVSWPLSLGTKHPKTTSRDHCPLAVAIIKGHEDIANTLLANLSAVGGVELAAEMAPTYAITQSRGKILRMMLNITGEENAP-----GGNA-------------------LLAAGANENATGQGGQRPIDVIGTIDLQNPPLSRLHPRTPTRFRDPVKEAEIRRTVERAPAFRAWSWAWPAFEGAGCS 296          
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A6H5L2Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 8.660e-35
Identity = 142/437 (32.49%), Postives = 207/437 (47.37%), Query Frame = 1
Query:  256 KLVTEVRTGNTLRVEAMLNAGASVNGSE--QLRPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQR-----GSLGQSALLMAAKDSPVNVLQHLRS--ERATHRRILEHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLC-VSPIVLTAAVCYGQSKVLHFLLGAG-GEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSPLEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAATPGCSNPFLKYSDHKERKRGRRKNRPGVRVLRQRTRKGFARAISR 1533
            +L+   + G+   V+A + AGA  +GS   +LRPLM A   G   +V+FL++ GA+++  T    +            F G R  H A  SG++D + +LL+AGA  +A N  G T LM  C  T     +   + +ALL AGAD  + D+EG   L HA A G  ++I  ++     +L+++          + L  A + + V  + HL S   RAT  R  E     L  AVV   + +VR L + G + +GG   V P  L +A   G++++L  LL  G G+     W+ Y     GPLL+ AAG+  +  V +LL AGA+    D   Q A D+I  +            + A  + D   +A I RTL+RGPAY A SW WP  A  G  +     S H E      K   GV + R+R  K   R I R
Sbjct:    9 RLLRGAQKGDLPAVQAAIAAGADPSGSSNSRLRPLMVASGSGSVEVVNFLLQNGAEMEHQTWGDDDH----------RFLGMRATHWAVTSGKLDTLLVLLKAGAVYDAVNAQGETCLMNACM-TDASPPTCVAMAKALLDAGADPLIEDREGQVALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPLQSALESNQVQAVAHLLSLGARATVDR--EGRGNLLRRAVVKNSEPIVRVLFEAGLESVGGAARVMPDSLASAAKAGRTRLLKLLLTVGRGDRTTGYWANYYV-WGGPLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIGDL-------LASGSKSASFRSD---KAAIRRTLLRGPAYRARSWTWPPLAA-GADDAVAFPSGHPE------KVPLGVHIFRRRGEKLVVRLIGR 414          
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: D8LMA9_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA9_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.120e-26
Identity = 108/333 (32.43%), Postives = 163/333 (48.95%), Query Frame = 1
Query:  304 MLNAGASVN--GSEQLRPLMTAVFFGLPTMVDFLIRKGADVDAPT-INRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWR-DIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMD--IIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRILEHDSGPLTA---AVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRY------DGNLAG--------------PLLHYAAGFIQLSSVKLLLVAGANPEARD 1215
            ML  GASV+  G   +RP+  A  +GL  ++  L+  GAD +AP   ++   +       Y N  G   L++A   G    + +LL+ GANPNA +  G TP+M  C   TG   S +  +M++LL+AGADL++ ++ G   L    A GR D  ++  ++S AP TLN     G + L  AA+    + +  L SE A+    L   +  +TA   AV+ G    VR L + G D +GGL      +  +V +G    L  LL   GE+ Q+ W+++      D +L G              P+LHYAA    + ++ +LL AGA PE  D
Sbjct:    1 MLEEGASVHDFGDAVVRPIAVATDYGLIDIIKALVATGADTEAPCWSDKDGAWKGNPEWSYRN--GFTALYIAPAVGNAGALLVLLQLGANPNATDSDGGTPIMVTCG--TGSVTSTKLTMMRSLLKAGADLAVENELG--GLAIHIAAGRCDAQVVALLLSMAPSTLNNATHNGLTPLAAAAEKGNESTMSLLFSEGASDS--LPWATTGITALHKAVIVGMGTSVRFLLENGLDAVGGLPGIAEAIRISVWFGCIDGLEMLLNVHGEKKQEFWAKHYVFGVQDDSLLGSVPFSITAILCEWYPILHYAAKHYSIPALHVLLSAGAIPETCD 325          
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: D7FVG9_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG9_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.260e-25
Identity = 103/325 (31.69%), Postives = 150/325 (46.15%), Query Frame = 1
Query:  259 LVTEVRTGNTLRVEAMLNAGASVNGSEQLR--PLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWR-DIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRIL--------EHDSGPLTAAVVNGHKNVVRTLTKYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAG-PLLHYAAGFIQLSSVKLLLVAGA 1197
            L + V  G+  R +A+L AGASV+GS +L   PL  A   G   M   LI +GA +D   +  P +  N  +      +G RP+H A  SG+ +  RLL+RAGA+PN AN+ G TPLM+ C     R    R  I++ LL  GAD ++VD      +  A   GR+++I  + + AP TL++ G  G + L  AA                                   PL  A+   H NVV  L     DPI         +++A+   ++++L  L+ A GEE +QK S      +  P+LH A       +  +LL AGA
Sbjct:    7 LFSSVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLD---LGAPRDVHNRLTGSLTMAKGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSAC--LVQRVGPHRASIVRELLDGGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHRAGRDGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLD-NLDPIKSSVDFGTAISSALVTKRARLLSRLVSAVGEERKQKKSLAGMTFSSSPILHIAVAQANPLTTSVLLAAGA 325          
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: UPI001EE520B2 (protein fem-1 homolog A-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE520B2)

HSP 1 Score: 86.7 bits (213), Expect = 4.110e-15
Identity = 69/260 (26.54%), Postives = 124/260 (47.69%), Query Frame = 1
Query:  316 GASVNGSEQLRPLMTAVFFGLPTMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRVDIVRLLLRAG-ANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMAAKDSPVNVLQHLRSERATHRRILEHDSGPLTAAVVNGHKNVVRTLT---KYGSDPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGE 1083
            G +  GS++  P+M A  +G   +V+FL+  GAD+               SLVY    G   LH+A + G +++ + ++  G  N N+      TP+M   +N        +D+++ L++ GADLS V   G   L  A  GG +D++R +++     +N RG   ++ +++AA+    +V++ L    A    +L   +  L  A   GH  VV+ +    K   +  G    +P+++ AA   G  K++ FL+  G +
Sbjct:   35 GINSRGSKKKTPVMVAGRWGHKDVVEFLVELGADL---------------SLVYEG--GSSVLHLACFGGHLEVAKYIVSKGKVNINSRGWKKKTPVMVAAAN------GHKDVVEFLVEHGADLSRVYGGGSSTLHLASFGGHLDVVRYIVAQNKVNINSRGWKKKTPVMVAAEMGEKDVVEFLVEHGAYLSLLLASGNNILHLACKGGHLEVVKYIVSQNKVNINSRGWKKKTPVMVAAA--NGHQKLVEFLIRKGAD 269          
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Match: A0A067MLJ7_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MLJ7_9AGAM)

HSP 1 Score: 83.2 bits (204), Expect = 1.180e-13
Identity = 81/287 (28.22%), Postives = 133/287 (46.34%), Query Frame = 1
Query:  427 PTINRPEEYTNTRSLVYLNFEGERP----LHVATYSGRVDIVRLLLRAGANPNAANICGHTPLMALCSNTTGR---DDSWRDIMQALLQAGADLSLVDKEGFPPLFHAYAGGRMDIIRAVI-SNAPHTLNQRGSLGQSALLMAAKDSP--VNVLQHLRSERATHRRILEHDSGPLTAAVVNGHKNVVRTLTKYGSDP-----IGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAGPLLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDV 1242
            P + + E   N    V    E E P    LH A Y G +   +LLL  GA+PNA +     P+  +  +       +++  D++++LL AGAD+   D +G  PL  AY  GR   +RA++ + A  +++          ++    +P    V+ ++ +  A      +     L  A   G  + VR L   G+DP     +  LC + +++ +    G  K +  LL AG + D   +  YD     PL H A+     S+V+LLL +GA+P+ R+R GQRA+ V
Sbjct:    7 PELEKLEHTLNAGKAVEAR-ESEWPHRTRLHRALYDGDLARAKLLLGFGADPNAQDADSQRPMHIVTESDHMAFVDEETRADMIESLLAAGADMDAKDDDGDTPLSLAYREGRPYCVRALVDAGADPSISGEWGAPTPTFVVELIRNPDGAEVVANVLAAGAGVNAKDDRGYTLLDRAAFCGSPSAVRALLDAGADPNVETNLPSLCSAAVLMKSD---GGEKAVVALLSAGADVDMHSF--YDKRGPSPL-HGASERGYASTVRLLLESGADPDLRNRGGQRALHV 286          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLL0_ECTSI4.890e-6640.35Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JAW5_9PHAE3.140e-3934.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSC7_9PHAE4.560e-3933.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSK8_ECTSI6.570e-3834.44Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JQQ9_9PHAE4.560e-3733.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2Q3_9PHAE8.660e-3532.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMA9_ECTSI1.120e-2632.43Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FVG9_ECTSI1.260e-2531.69Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
UPI001EE520B24.110e-1526.54protein fem-1 homolog A-like n=1 Tax=Haliotis rubr... [more]
A0A067MLJ7_9AGAM1.180e-1328.22Uncharacterized protein (Fragment) n=1 Tax=Botryob... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:141686..144160 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLL0
PFAMsAnk_2
Model size1987
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.53e-68
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-17_000750.1
Descriptionspectrin binding
Cds size1473
COG categoryI
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866529.4226692-UTR-A-nodosum_M_contig113:141685..1421181680866529.4226692-UTR-A-nodosum_M_contig113:141685..142118Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig113 141686..142118 -
1680866529.4518802-UTR-A-nodosum_M_contig113:144079..1441601680866529.4518802-UTR-A-nodosum_M_contig113:144079..144160Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig113 144080..144160 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866529.43233-CDS-A-nodosum_M_contig113:142118..1421401680866529.43233-CDS-A-nodosum_M_contig113:142118..142140Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 142119..142140 -
1680866529.440759-CDS-A-nodosum_M_contig113:142628..1440791680866529.440759-CDS-A-nodosum_M_contig113:142628..144079Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 142629..144079 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.19.1prot_A-nodosum_M_contig113.19.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig113 142119..144079 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig113.19.1

>prot_A-nodosum_M_contig113.19.1 ID=prot_A-nodosum_M_contig113.19.1|Name=mRNA_A-nodosum_M_contig113.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=491bp
MNSLSLHSYHPSVVHESYRPFLRHALPTFTSHRESVTRRFSISPSMSTGS
ASQQNENLKLVTEVRTGNTLRVEAMLNAGASVNGSEQLRPLMTAVFFGLP
TMVDFLIRKGADVDAPTINRPEEYTNTRSLVYLNFEGERPLHVATYSGRV
DIVRLLLRAGANPNAANICGHTPLMALCSNTTGRDDSWRDIMQALLQAGA
DLSLVDKEGFPPLFHAYAGGRMDIIRAVISNAPHTLNQRGSLGQSALLMA
AKDSPVNVLQHLRSERATHRRILEHDSGPLTAAVVNGHKNVVRTLTKYGS
DPIGGLCVSPIVLTAAVCYGQSKVLHFLLGAGGEEDQQKWSRYDGNLAGP
LLHYAAGFIQLSSVKLLLVAGANPEARDRVGQRAIDVIATMDPENPPTSP
LEPRVADRKRDPVMEAEIYRTLMRGPAYLAWSWAWPTAATPGCSNPFLKY
SDHKERKRGRRKNRPGVRVLRQRTRKGFARAISRYAMKEG*
back to top

mRNA from alignment at A-nodosum_M_contig113:141686..144160-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig113.19.1 ID=mRNA_A-nodosum_M_contig113.19.1|Name=mRNA_A-nodosum_M_contig113.19.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2475bp|location=Sequence derived from alignment at A-nodosum_M_contig113:141686..144160- (Ascophyllum nodosum dioecious)
CCTTAATTCAGTAACTACGAATTCCAAGAGAGAGAGTCGAGTCCTACCGA TGCATAAGAACCAGAACGCTCTCATCTTGAAATGAACTCCTTATCCCTAC ATTCGTATCATCCCTCTGTTGTGCACGAATCCTACCGTCCATTTTTACGG CATGCTTTACCGACTTTCACCTCACACAGAGAGAGTGTCACGAGGCGCTT TTCCATATCACCATCGATGAGTACAGGATCCGCTTCTCAGCAAAATGAAA ATTTGAAACTTGTCACGGAAGTCAGAACAGGAAATACCCTGCGTGTAGAG GCCATGTTGAACGCCGGAGCTAGCGTGAACGGCTCCGAGCAGCTTCGGCC TCTAATGACCGCGGTGTTTTTCGGTCTTCCCACGATGGTGGATTTTCTCA TAAGAAAGGGTGCTGACGTCGATGCACCTACGATCAATCGGCCAGAAGAA TACACCAACACGAGATCGCTTGTCTACTTGAACTTCGAAGGCGAACGGCC GCTTCACGTCGCAACCTATAGCGGTCGCGTGGATATCGTCCGCCTTCTGT TGCGTGCGGGAGCGAATCCAAACGCGGCAAATATTTGCGGTCACACCCCA CTCATGGCGCTGTGCTCAAATACGACAGGGAGAGACGATAGCTGGCGTGA TATCATGCAAGCGCTGTTGCAGGCCGGAGCGGATCTTAGCTTGGTCGACA AGGAGGGGTTCCCCCCCCTGTTCCATGCATACGCTGGGGGCAGGATGGAC ATAATCCGTGCAGTGATTTCGAATGCACCCCACACTCTGAACCAGCGTGG AAGCCTGGGGCAGAGCGCACTTTTGATGGCAGCAAAGGACAGTCCCGTCA ACGTACTACAGCATTTACGATCAGAGAGAGCAACGCATCGTCGAATTCTC GAACACGACAGCGGCCCCCTCACCGCGGCCGTGGTGAACGGACACAAGAA CGTAGTTCGCACTCTAACCAAATACGGCTCGGACCCTATTGGGGGTTTGT GCGTTTCGCCCATCGTGTTGACTGCAGCCGTCTGCTATGGACAGTCGAAG GTTCTTCATTTCCTGCTTGGCGCAGGCGGAGAAGAGGACCAACAAAAGTG GTCAAGGTACGACGGCAACCTAGCCGGGCCTCTGCTTCACTACGCCGCGG GTTTTATACAACTGTCATCAGTTAAGCTCCTTCTCGTCGCGGGCGCGAAT CCAGAGGCACGCGATAGGGTGGGGCAGCGCGCAATCGACGTCATCGCGAC CATGGACCCAGAAAATCCGCCAACCAGCCCCCTCGAGCCAAGAGTCGCCG ATCGCAAACGAGACCCCGTTATGGAAGCTGAGATCTATCGAACATTGATG CGTGGGCCAGCGTACCTTGCGTGGTCGTGGGCGTGGCCGACGGCAGCAAC GCCAGGTTGCTCCAATCCTTTTCTGAAGTATAGCGATCACAAGGAGCGAA AGCGAGGGCGGAGGAAAAACAGGCCAGGCGTTCGAGTTTTACGACAAAGA ACCAGGAAGGGGTTCGCGAGGGCGATTAGCAGGTATGGATTTAGTTGGTG GGCTCCCCAGTTGTCTTCATTTTGTTCGGCGTCAGAGATCCCGCTAAGAG AAGCCATTCCTCGAAAGTAAACACGGACTTGCGCCTTGTTGGCAAACATT TGCACTCAAAACAACATTTTGAGAAACTTTTCACGTTCCTGTGGACACTT TCGAGAGAGGGGGTTGGGCTGTGAAAGTCACGCGTTTGTTCGAGCATTAA TAACTCGCTGGCCCTTCTCCATGACGTCCACGAGCCATCCTCGACTGACT GCCGTGATCGCAGCTTTGGGGTAAATTTGAGAGCTTTAGAACGAACTGCG GCGCCCCTTTGCCTGATGTGTGCTATATCCGCCAACGTCCTCGATAAGCC TTGAAACAGATATGTAATCGCTTCAATTATTGTCATTGTGCACACAAGTG CATGCAAGGGTTGAAAGCTCGCCGCACCATGCCGTTCCTTCTCCCCTGCG CTATGCTGAATTCGAATCAGGTATGCCATGAAGGAAGGATGACAAATCCG ACGAGAGCGAACCTGCGCTGCCGGAAAAAAAGAAACACGTACCCGAGAGC GTTGTTGCTCGCTCCCCCAAGCCACACAGGTTTTTCAGCGTAAAATGTCT GCGTAAAGGGCCTTCTTTGGAGTGTCCCCGCAGTTGCTTCAAAGTTCAAG CCGAAGTGTGTGGTTCGCAGGGGAATCACGAGGTGGAATGAACAAGTCGG ACGCCTGAAAAGTATTCACGGAATCGTAAAACGCGAAACGAGCCAAACAA TGCAGAAATGGACAAAAACAAATGGCCAAAACAAATCACTACACCAGCCT GGGCGCCGCTTGGCAGCTCGTTGCGGTTGGAAACACGCTGTTGAAAGAAA CCAGTTAACTGAGGCAGTAGAAAGCAACTCACCACGAGAACCAGGCCCCG TTACCGATACGCCTTCGAGTATGGG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig113:141686..144160-

>mRNA_A-nodosum_M_contig113.19.1 ID=mRNA_A-nodosum_M_contig113.19.1|Name=mRNA_A-nodosum_M_contig113.19.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1473bp|location=Sequence derived from alignment at A-nodosum_M_contig113:141686..144160- (Ascophyllum nodosum dioecious)
ATGAACTCCTTATCCCTACATTCGTATCATCCCTCTGTTGTGCACGAATC
CTACCGTCCATTTTTACGGCATGCTTTACCGACTTTCACCTCACACAGAG
AGAGTGTCACGAGGCGCTTTTCCATATCACCATCGATGAGTACAGGATCC
GCTTCTCAGCAAAATGAAAATTTGAAACTTGTCACGGAAGTCAGAACAGG
AAATACCCTGCGTGTAGAGGCCATGTTGAACGCCGGAGCTAGCGTGAACG
GCTCCGAGCAGCTTCGGCCTCTAATGACCGCGGTGTTTTTCGGTCTTCCC
ACGATGGTGGATTTTCTCATAAGAAAGGGTGCTGACGTCGATGCACCTAC
GATCAATCGGCCAGAAGAATACACCAACACGAGATCGCTTGTCTACTTGA
ACTTCGAAGGCGAACGGCCGCTTCACGTCGCAACCTATAGCGGTCGCGTG
GATATCGTCCGCCTTCTGTTGCGTGCGGGAGCGAATCCAAACGCGGCAAA
TATTTGCGGTCACACCCCACTCATGGCGCTGTGCTCAAATACGACAGGGA
GAGACGATAGCTGGCGTGATATCATGCAAGCGCTGTTGCAGGCCGGAGCG
GATCTTAGCTTGGTCGACAAGGAGGGGTTCCCCCCCCTGTTCCATGCATA
CGCTGGGGGCAGGATGGACATAATCCGTGCAGTGATTTCGAATGCACCCC
ACACTCTGAACCAGCGTGGAAGCCTGGGGCAGAGCGCACTTTTGATGGCA
GCAAAGGACAGTCCCGTCAACGTACTACAGCATTTACGATCAGAGAGAGC
AACGCATCGTCGAATTCTCGAACACGACAGCGGCCCCCTCACCGCGGCCG
TGGTGAACGGACACAAGAACGTAGTTCGCACTCTAACCAAATACGGCTCG
GACCCTATTGGGGGTTTGTGCGTTTCGCCCATCGTGTTGACTGCAGCCGT
CTGCTATGGACAGTCGAAGGTTCTTCATTTCCTGCTTGGCGCAGGCGGAG
AAGAGGACCAACAAAAGTGGTCAAGGTACGACGGCAACCTAGCCGGGCCT
CTGCTTCACTACGCCGCGGGTTTTATACAACTGTCATCAGTTAAGCTCCT
TCTCGTCGCGGGCGCGAATCCAGAGGCACGCGATAGGGTGGGGCAGCGCG
CAATCGACGTCATCGCGACCATGGACCCAGAAAATCCGCCAACCAGCCCC
CTCGAGCCAAGAGTCGCCGATCGCAAACGAGACCCCGTTATGGAAGCTGA
GATCTATCGAACATTGATGCGTGGGCCAGCGTACCTTGCGTGGTCGTGGG
CGTGGCCGACGGCAGCAACGCCAGGTTGCTCCAATCCTTTTCTGAAGTAT
AGCGATCACAAGGAGCGAAAGCGAGGGCGGAGGAAAAACAGGCCAGGCGT
TCGAGTTTTACGACAAAGAACCAGGAAGGGGTTCGCGAGGGCGATTAGCA
GGTATGCCATGAAGGAAGGATGA
back to top