mRNA_A-nodosum_M_contig113.18.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: D7FLK9_ECTSI (TsaA-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLK9_ECTSI) HSP 1 Score: 345 bits (885), Expect = 1.990e-115 Identity = 175/240 (72.92%), Postives = 193/240 (80.42%), Query Frame = 1
Query: 10 PSHRRL-VFDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAGGCEESRGHTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRR-----------DSVADSEWVGASVRHRCDVEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTREVASAPHCALLFDGLRVLFSATV 693
PS R L VFDK SVSPV+LDGVEEFSH+W+FWAFHLNTN KD RAHAG +SRGHTFPAKVSPPFLKRRVGVFSTR+PHRPNP+GVSLCKV+ VNAAERSI+LSGVDLVDGTPVFDIKPYVPDYD PR R D V + WV ASV+HR V+WAP AE QL++ C +R+G+GPRMRFF GDHEGA+ AITESLSVDVRS RKTRE AP C LLFDGLRV F+ TV
Sbjct: 109 PSTRALLVFDKGSVSPVSLDGVEEFSHVWVFWAFHLNTNQKDARAHAGMRPDSRGHTFPAKVSPPFLKRRVGVFSTRTPHRPNPLGVSLCKVEEVNAAERSIKLSGVDLVDGTPVFDIKPYVPDYDRPRARDGPVSVGTGDGDDGVRVAAWVEASVKHRRAVQWAPDAEVQLEEACSDRRRKGDGPRMRFFSGDHEGAKMAITESLSVDVRSIRKTREAVVAPSCVLLFDGLRVEFATTV 348
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: A0A067CDS7_SAPPC (TsaA-like domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CDS7_SAPPC) HSP 1 Score: 199 bits (507), Expect = 1.170e-59 Identity = 110/228 (48.25%), Postives = 147/228 (64.47%), Query Frame = 1
Query: 1 HVRPSHRRLVFDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAG-GCEESRGHTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRRDSVADSEWVGASVRHRCDVEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTREVASAPHCALLFDGLRVLF 681
++ P+ R V +S+SP ALDG+E FSH+WI + FH NTN K+ RAHAG E HTF AKVSPP LK+R+GVF+TR+PHRPNPIG++L KV+ V+ A R++ +SG+DLVDGTP+ D+KPYVP YDC P VA + W+ A+V + V WAP+A + L L F+ DH AIT+ L+VDVRS +TR++A + L FD L V +
Sbjct: 92 YLAPATRAHVVCHTSISPEALDGLEAFSHVWITFIFHCNTNSKNARAHAGLRTEAGTAHTFRAKVSPPMLKQRMGVFATRTPHRPNPIGITLAKVERVDKAARTVVVSGIDLVDGTPIVDLKPYVPAYDCMDPT--DVAVAPWIAATVSTQRSVAWAPEALDALLHLSRPST---------FYAEDHARLCDAITQVLAVDVRSVEQTRKMAGRVN-HLAFDALDVQY 307
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: T0RI72_SAPDV (TsaA-like domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RI72_SAPDV) HSP 1 Score: 192 bits (489), Expect = 6.240e-57 Identity = 103/221 (46.61%), Postives = 141/221 (63.80%), Query Frame = 1
Query: 43 SVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAG-GCEESRGHTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRRDSVADSEWVGASVRHRCDVEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTREVASAPHCALLFDGLRVLFSATVVTP 702
S+SP ALDG+E FSH+W+ + FH NTN K+ RAH G E HTF AKVSPP LK+R+G+F+TR+PHRPNPIG++L K++ V+ A R++ +SG+DLVDGTP+ D+KPYVP YDC P VA + W+ A+V + V W P+A+ + +L RF+ D AIT+ L+VDVRS +TR++AS + L FD L V + P
Sbjct: 106 SISPEALDGLEAFSHVWLTFVFHCNTNGKNARAHTGLRTEAGTAHTFRAKVSPPMLKQRMGIFATRTPHRPNPIGITLAKIERVDKAARTVVVSGIDLVDGTPIVDLKPYVPAYDCMEPT--DVAVAPWIAATVSTQRSVAWVPEAKATVLRLSRPS---------RFYANDTARLCDAITQVLAVDVRSVEQTRKMASRVN-HLAFDDLDVQYEVQDTHP 314
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: A0A1V9YMY9_9STRA (TsaA-like domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMY9_9STRA) HSP 1 Score: 190 bits (482), Expect = 8.260e-56 Identity = 101/210 (48.10%), Postives = 138/210 (65.71%), Query Frame = 1
Query: 1 HVRPSHRRLVFDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAG-GCEESRGHTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRRDSVADSEWVGASVRHRCDVEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTRE 627
++ PS R V S+VSP LDG+E FSH+WI + FH NTN K+ RAHAG E + HTF AKVSPP LK+R+G+F+TR+PHRPNPIG++L +++ V+ ++ +SG+DLVDGTPV D+KPYVP YDC P D VA + W+ A+V + V W QA + R RF++ D G R+AITE L+VDVRS+ + ++
Sbjct: 83 YLAPSTRAAVVCHSNVSPETLDGLEAFSHVWITFVFHTNTNGKNARAHAGLRTEGATAHTFRAKVSPPMLKKRLGIFATRTPHRPNPIGITLARIESVDKQRCTVFVSGIDLVDGTPVLDLKPYVPAYDCV-PTAD-VAVASWIAATVATQRSVMWTDQAIADITANAR---------RTRFYKDDAPGLRQAITEVLAVDVRSADQAKK 281
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: A0A2D4C449_PYTIN (TsaA-like domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C449_PYTIN) HSP 1 Score: 181 bits (459), Expect = 9.960e-53 Identity = 103/227 (45.37%), Postives = 143/227 (63.00%), Query Frame = 1
Query: 22 RLVFDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAGGCEESRGHTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRRDSVADSEWVGASVRHRCDVEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTREVASAPHCALLFDGLRVLFSATVVTP 702
R+VF+++ VSP LDG+E+FSH+WI + FH NTN K+ RAH G +S +TF AK++PP LK+RVG+FSTRSPHRPNPIG++L +++ V+ A+R++ LSG+DLVDGTPV DIKPYVP YDC D++ S WV + D+ + +++ L R ++ D EG AI + L VDVRS R SA L+ D +RV ++ T TP
Sbjct: 75 RIVFNRN-VSPDTLDGLEQFSHVWIVFVFHKNTNGKNARAHEGLRSDSYRYTFKAKIAPPKLKQRVGIFSTRSPHRPNPIGITLARIERVDHAKRTVYLSGLDLVDGTPVLDIKPYVPAYDCVP---DALVAS-WVSS------DLSPTVALQNEVRHLASSSSR--------LYQDDPEGLVSAIEQVLQVDVRSRDLARRRDSASQNHLVLDVVRVTYAITSTTP 282
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: A0A024TC49_9STRA (TsaA-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TC49_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.360e-51 Identity = 98/228 (42.98%), Postives = 143/228 (62.72%), Query Frame = 1
Query: 10 PSHRRLVFDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAGGCEESRGHTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRRDSVADS---EWVGASVRHRCDVEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTREVASAPHCALLFDGLRVLFS 684
PS R + ++SP A+DG+ EFSH+WI + FH NTN K+ RAH G HTF AK+SPP LK+R+GVF+TR+PHRPNPIG++L K++ V+ A RSI +S +DLVDGTPV D+KPYVP Y DS+ S +W+ ASV+ + V + E+ +++ C G F+ G+ + AI + L+VDVRS +T ++ + + LLFD ++V ++
Sbjct: 99 PSTRGRIQFHRNISPDAMDGLSEFSHIWITFVFHANTNGKNARAHDGLLSSRTSHTFRAKISPPMLKQRIGVFATRTPHRPNPIGITLAKIEKVDLATRSILVSALDLVDGTPVLDLKPYVPMY-------DSLPGSTVPDWIQASVQSQSAVRFDSDKEDAMRQCCAGHSV--------FYAGEPDVMLEAIAQVLAVDVRSQVQTAKMHTKVN-KLLFDTVQVEYT 310
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: A0A6G0XJI2_9STRA (TsaA-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJI2_9STRA) HSP 1 Score: 177 bits (449), Expect = 7.030e-51 Identity = 94/214 (43.93%), Postives = 136/214 (63.55%), Query Frame = 1
Query: 22 RLVFDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAGGCEESRGHTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRRDSVADSEWVGASVRHRCDVEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTREVASAPHCALLFD 663
R+VF++S +SP ALDG+ F H+WI + FH NTN K+ RAH G +S GHTF AK+SPP LK+RVGVF+TR+PHRPNPIG++L K+D V+ R++ +S +DLV+GTPV DIKPYVP YD A W+ + + V +A + Q++ C + +F++ + + R AI E L+VDVRS +T ++ + + L+FD
Sbjct: 107 RIVFNRS-ISPEALDGLNAFGHVWITFVFHCNTNGKNARAHEGLRPDSHGHTFKAKISPPMLKKRVGVFATRTPHRPNPIGIALAKIDKVDG--RTLWISAIDLVEGTPVLDIKPYVPKYDS----LPQSAVPAWIAETYGTQSSVRFAEECAAQIETCCR---------KSKFYKDEPDNLRSAIEEVLAVDVRSQMQTAKMQKSTN-RLVFD 303
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: A0A836CCT4_9STRA (TsaA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT4_9STRA) HSP 1 Score: 177 bits (450), Expect = 8.330e-51 Identity = 102/244 (41.80%), Postives = 143/244 (58.61%), Query Frame = 1
Query: 1 HVRPSHRRLV-FDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAGG--------CEESRGHTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRRDSVADSEWVGASVRHRCDVEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTREVA----------SAPHCALLFDGLRV 675
H+ P R ++ +S++SP +LDG+ +FSH+W+F+ FHLN N + TR GG TFPAKV+PPFLKR+VG+F+TRSPHRPN IG+SLC++D V+ A +I L G+DLV GTPV DIKP+VP YD P + WV +S++H V W P A+EQ+ L + ++ + + A AI E+L VD+RS+ T++ A S+ LLFD L V
Sbjct: 80 HLAPRTRAVLQLKRSAISPDSLDGLNKFSHVWVFFVFHLNNNQRWTRGLTGGGGTGDDAAALRKVAGTFPAKVTPPFLKRKVGLFATRSPHRPNNIGLSLCRIDRVDMAGLAIHLRGIDLVHGTPVLDIKPFVPAYDAVTPAHVAP----WVESSLQHNRAVLWEPGAQEQVTALAAA---------LHLYKDEPQEAIAAIAEALEVDIRSAFMTKKAAGQKGGGSIKGSSSSGILLFDTLAV 310
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: A0A8K1CSJ8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSJ8_PYTOL) HSP 1 Score: 174 bits (442), Expect = 1.240e-49 Identity = 100/225 (44.44%), Postives = 130/225 (57.78%), Query Frame = 1
Query: 10 PSHRRLVFDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAGGCEESRGHTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRRDSVADSEWVGASVRHRCD-VEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTREVASAPHCALLFDGLRVLF 681
PS R LV +VSP L G+E F+HLWI + FH NTN K+ RAH G +S +TF AK++PP LK RVG+FSTRSPHRPNPIG++L K++ V+ A R++ LSG+DLVDGTPV DIKPYVP YD R + WV + + V W + + C R +RGD + AI E L VDVRS +T + L+ D +RV +
Sbjct: 114 PSTRGLVTFHRNVSPDTLIGLEAFTHLWIVFVFHKNTNGKNARAHQGLRSDSHRYTFKAKIAPPKLKERVGIFSTRSPHRPNPIGITLAKIESVDCATRTVHLSGLDLVDGTPVLDIKPYVPAYDAVLDARAA----SWVSLDLSPTINQVRWTSPDTRAVLECC--------AETSRLYRGDAAALQAAIEEVLQVDVRSKEQTAR-RQRDNNTLVLDCVRVSY 325
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Match: A0A1W0A6M6_9STRA (TsaA-like domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6M6_9STRA) HSP 1 Score: 181 bits (459), Expect = 9.650e-49 Identity = 95/209 (45.45%), Postives = 134/209 (64.11%), Query Frame = 1
Query: 10 PSHRRLVFDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAGGCEESRG--HTFPAKVSPPFLKRRVGVFSTRSPHRPNPIGVSLCKVDVVNAAERSIRLSGVDLVDGTPVFDIKPYVPDYDCPRPRRDSVADSEWVGASVRHRCDVEWAPQAEEQLKKLCHGEQRRGEGPRMRFFRGDHEGARRAITESLSVDVRSSRKTREV 630
P + V ++VSP ALDG+E FSH+WI + FH NTN K+ RAH G ES+ HTF AKVSPP LK+R+GVF+TR+PHRPNPIG++L K+D V+ R + +SG+DLVDGTP+ D+KPYVP YDC D V + W+ +V VEW+ ++ + L+ + +F++ D G AI + L+VDVRS +T+++
Sbjct: 428 PGTKGRVRCHNNVSPEALDGLEAFSHVWITFVFHCNTNGKNVRAHEGLMNESKSTAHTFRAKVSPPMLKQRMGVFATRTPHRPNPIGITLVKIDQVDKKHRCVYVSGIDLVDGTPILDLKPYVPAYDCIH--SDQVQVATWIEKTVGIERSVEWSQESLDGLQACS---------KKSKFYKDDMAGLCTAIEQVLAVDVRSIEQTKKM 625 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.18.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig113.18.2 >prot_A-nodosum_M_contig113.18.2 ID=prot_A-nodosum_M_contig113.18.2|Name=mRNA_A-nodosum_M_contig113.18.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=234bp HVRPSHRRLVFDKSSVSPVALDGVEEFSHLWIFWAFHLNTNMKDTRAHAGback to top mRNA from alignment at A-nodosum_M_contig113:139359..141032+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig113.18.2 ID=mRNA_A-nodosum_M_contig113.18.2|Name=mRNA_A-nodosum_M_contig113.18.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1674bp|location=Sequence derived from alignment at A-nodosum_M_contig113:139359..141032+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig113:139359..141032+ >mRNA_A-nodosum_M_contig113.18.2 ID=mRNA_A-nodosum_M_contig113.18.2|Name=mRNA_A-nodosum_M_contig113.18.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=702bp|location=Sequence derived from alignment at A-nodosum_M_contig113:139359..141032+ (Ascophyllum nodosum dioecious)back to top |