mRNA_A-nodosum_M_contig113.12.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: D7FLK3_ECTSI (AAA ATPase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK3_ECTSI) HSP 1 Score: 439 bits (1129), Expect = 1.120e-140 Identity = 260/449 (57.91%), Postives = 300/449 (66.82%), Query Frame = 1
Query: 1 MVVSRCATELREGAPVCSAMPNAALYQRFVCRVQGYPDAAPKPPVDERCVGSIVAAIAPLVGPETRRILA-ARSRPAVLLHGPATAEGS-SLVEAAAERLGLHVRTITMRAVLGVAAHGG-----TGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXX------------------------RRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSE-----ALERVGRD-------------GERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
MVVS+ TELREG P+CS +P YQRFVCR GYP KPP DERCV ++VAA+AP+VGPE R+L ARSRPAVLLHGP AEG SLVEAAAERLG+HVRT+ MR+VLG A H G GGA GALRQEF+AA EASPCVLHLRGI S+A GARQ PG EEADER SLS CLE+ D+A A+A ++ RRCFTHEV A P P EKLRLSLL++HL G +C+T++AL+ LARRLLGRSA EI+TLV+ A ALAR FGG VD L ++E A ++ GR ER + EG +LVLTL DLE+GEKRLP P+S+MKMGCPKIPQVKWDD+GGLGSVKREILD+IELPLKHPEVFG+GVK+RAGILLYGPPGTG
Sbjct: 406 MVVSQRVTELREGGPICSPVPETLRYQRFVCRANGYPCPEAKPPFDERCVEAVVAALAPVVGPEAFRLLVVARSRPAVLLHGPGAAEGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFAAGGAAGALRQEFQAAMEASPCVLHLRGITSLAAGARQDPGGEEADERFVESLSACLEKIDSAAAAAAATMPGEGRGSRRVQERGRSLPSSSYVAAGAVVLVGSAESLERVPVSLRRCFTHEVLA--PFPPEKLRLSLLEHHLGGVTTAECITREALKGLARRLLGRSATEIQTLVANAGGEALARSFGGPGVDWLAVAESEAAKAQQQNGRGRPSVVSGTAAAGGAERGGDSVGGEG---GRGKLVLTLTDLEKGEKRLPAPSSSMKMGCPKIPQVKWDDIGGLGSVKREILDVIELPLKHPEVFGKGVKRRAGILLYGPPGTG 849
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A6H5JDF2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDF2_9PHAE) HSP 1 Score: 420 bits (1079), Expect = 1.320e-134 Identity = 261/497 (52.52%), Postives = 303/497 (60.97%), Query Frame = 1
Query: 1 MVVSRCATELREGAPVCSAMPNAALYQRFVCRVQGYPDAAPKPP-------------------------------------------------VDERCVGSIVAAIAPLVGPETRRILA-ARSRPAVLLHGPATAEGS-SLVEAAAERLGLHVRTITMRAVLGVAAHGG-----TGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGA------------------------SATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEA----LERVGRD-------------GERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
MVVS+ TELREG PVCS +P + YQ+FVCR G+P A KPP DERCV ++VAA+AP+VGPE R+L ARSRPAVLLHGP A+G SLVEAAAERLG+HVRT+ MR+VLG A H G GGA GALRQEF+AA EA PCVLHLR I S+A GARQ PG EEADER SLS CLEE D+A A S++S RRCFTHEV A P P EKLRLSLL++HL G +C+T++AL+ LARRLLGRS EI+TLV+ A ALAR FGG +VD L ++E+ +R GR ERS + EG +LVLTLADLE+GEKRLPPP+S+MKMGCPKIPQVKWDD+GGLGSVKREILD+IELPLKHPEVFG+GVK+RAGILLYGPPGTG
Sbjct: 346 MVVSQRVTELREGGPVCSPVPEISRYQQFVCRANGFPCPATKPPFALLRMEMSKISKCNGAVRAYIKQCGWSAVAGRCLHARTGNVARHDNSSTDERCVEAVVAALAPVVGPEAFRLLVVARSRPAVLLHGPGAAQGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFAAGGAAGALRQEFQAAMEAYPCVLHLRAITSLAAGARQDPGGEEADERFVESLSACLEEIDSAAAAXXXTMPGEGRGSGRVQERGRSLPSSSSVAAGTVVLVGSAESLERVPASLRRCFTHEVLA--PFPPEKLRLSLLEHHLGGVTTAECITREALKGLARRLLGRSVTEIQTLVANAGGEALARSFGGPDVDWLAMAESEAAKAQRNGRGRSSVVSGAAAAGGAERSGDSVGGEG---GRGKLVLTLADLEKGEKRLPPPSSSMKMGCPKIPQVKWDDIGGLGSVKREILDVIELPLKHPEVFGKGVKRRAGILLYGPPGTG 837
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A836CKR6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR6_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.840e-41 Identity = 145/451 (32.15%), Postives = 200/451 (44.35%), Query Frame = 1
Query: 4 VVSRCATELREGAPVCSAMPNAALYQRFVCRVQGYPDAAPKPPVDERCVGSIVAAIAPLVGPETRRILAAR--SRPAVLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAP--GSEEADERLAASLSTCLEEADAAGASA------------------TSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQD--ALQALARRLLGRSAAEIRTLVSKASDAALARFF------------------------GGAEVDLLGLSEALERVGRDG----ERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
VV+RCAT L + V S +P+A F C G+P P++ ++ +AP V ET+ L + + P +LLHGP S++ AAA R G+ V ++ A+ A G AL AA + +P +L +R +A A G+E+AD R E+A AA + + RCFTH + A PLP E LRL+LL++HL A + D AL A+ +R +GR + E+R LV A+ + VD L +E G G LTLADL GE L PP S++++G P IP V+W+DVGGL +VK EILD+IELPL+HPE+F GVK+RAG+LLYGPPGTG
Sbjct: 221 VVARCATTLMQSGAVRSRVPDAFACHPFACAAAGHPXXXXXAPLNAVLSDGVLDVLAPAVAAETQSQLESGGGALPTLLLHGPRGVGKESVLRAAAARAGMSVVVLSAHAL----AEGD------ALAAALAAALDCAPALLLVRALAGAAXXXXXXXXQGAEDADARXXXXXXXXXEQALAAARGSCRDAREXXXXXXXXXXXXSGDGGCAVVLAATAEALDGVPPAQLRCFTHVLEA--PLPDEPLRLALLRHHLAAAALRAAADVDDAALSAVTKRTVGRVSGELRALVGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSGVDWLQDAEQALLAGASGGGXXXXXXXXXXXXXXXXXXXXXXLTLADLAAGEAALLPPNSSLRIGRPLIPNVRWEDVGGLAAVKGEILDVIELPLRHPEIFAAGVKRRAGVLLYGPPGTG 659
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A7S2S106_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S106_9STRA) HSP 1 Score: 132 bits (332), Expect = 4.800e-30 Identity = 112/328 (34.15%), Postives = 164/328 (50.00%), Query Frame = 1
Query: 229 VLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIAS---VAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDE-KELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
+LL+G + ++E AA + GLHV ++ + G+ A L+ + + SPC++HLR I + V G+ Q E+ E L + S +A ++T S R CFTHE+ AP S+ RL++L++ AN +L++LA R GR+A E++ L ++A+ L R + +A + + S+ QD+ LVLT L E + LP AS M +G PKIPQV W DVGGLG K EILDM++LPL+HPE+F GV++R+GILLYGPPGTG
Sbjct: 54 ILLYGGKSTGKRHMIEKAARKFGLHVFEESLTPLRGLPEER----AAKKLKHILQQGTQVSPCIIHLRHIQALTPVPSGSEQPTDPEQLVEILKSFSSK-----NAILVASTQSVEDIPAVI-------------RGCFTHEIGIEAP--SKSGRLAILEFLT--ANRISLADDVSLESLATRTAGRTAMELKALFAEAACILLQRQPKVPTAQSSAMEDAWRNI-------TNNVTSDLSGQDDLPPLVLTQDILSEALEGLPS-ASAMDIGAPKIPQVYWKDVGGLGHAKDEILDMVQLPLQHPELFASGVRQRSGILLYGPPGTG 347
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A7S2S103_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S103_9STRA) HSP 1 Score: 132 bits (332), Expect = 7.980e-30 Identity = 112/328 (34.15%), Postives = 164/328 (50.00%), Query Frame = 1
Query: 229 VLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIAS---VAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDE-KELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
+LL+G + ++E AA + GLHV ++ + G+ A L+ + + SPC++HLR I + V G+ Q E+ E L + S +A ++T S R CFTHE+ AP S+ RL++L++ AN +L++LA R GR+A E++ L ++A+ L R + +A + + S+ QD+ LVLT L E + LP AS M +G PKIPQV W DVGGLG K EILDM++LPL+HPE+F GV++R+GILLYGPPGTG
Sbjct: 376 ILLYGGKSTGKRHMIEKAARKFGLHVFEESLTPLRGLPEER----AAKKLKHILQQGTQVSPCIIHLRHIQALTPVPSGSEQPTDPEQLVEILKSFSSK-----NAILVASTQSVEDIPAVI-------------RGCFTHEIGIEAP--SKSGRLAILEFLT--ANRISLADDVSLESLATRTAGRTAMELKALFAEAACILLQRQPKVPTAQSSAMEDAWRNI-------TNNVTSDLSGQDDLPPLVLTQDILSEALEGLPS-ASAMDIGAPKIPQVYWKDVGGLGHAKDEILDMVQLPLQHPELFASGVRQRSGILLYGPPGTG 669
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A507DMC3_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DMC3_9FUNG) HSP 1 Score: 131 bits (329), Expect = 2.130e-29 Identity = 107/326 (32.82%), Postives = 161/326 (49.39%), Query Frame = 1
Query: 229 VLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDEKELVLTLADLEE--GEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
+LLHGP +L AAA+ LG+H+ ++ ++G + AL + F+ A A PC L LR + ++A + +E ++A+ L+ CL+ A + R F HE++ +P +E RLS+L+ L+ VG LQ LA + +A +++ LVS+A+ +++ R ++E LE+ GR AR+ +V+ D E G+ R + +G PKIP V WDDVGGL VKR +LD I+LPL+HPE+F GVKKR+GILLYGPPGTG
Sbjct: 550 ILLHGPRGVGKRALASAAADVLGIHIMIVSCFDLVGDS----ESKTEAALERVFDRAEVAVPCALVLRNVEALAKRSEVVETGQE--PKIASVLAACLKRAG----RVLETQGFPLLVIGTASDPGKMPTPIRTAFRHEIQVESP--AEAARLSILRNILRDVPVGP---DTDLQTLAEQTAALNARDLKDLVSRAAASSVVR-----------VTETLEKSGRFAS-DDDLARTG--------VVIIGKDFEMALGKARA---VHSDSIGAPKIPNVSWDDVGGLAHVKRTVLDTIQLPLEHPELFAGGVKKRSGILLYGPPGTG 837
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A2R5GNQ2_9STRA (26S proteasome regulatory subunit 7 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNQ2_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.730e-29 Identity = 115/347 (33.14%), Postives = 170/347 (48.99%), Query Frame = 1
Query: 199 RILAARSRPAVLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEAD--ERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDA----ALARFFGGAEVDLLGLSEALERV-------GRDGERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
R++ R +V+LHG ++ AAA LG HV ++ + G+ A LR A + +PC++HLR + ++A A GSE+ D E++A L + + AS S+ R CFTHEV AP + RL++L++ G + +L++LA R GR+A E+R L + A+ A A EA V +G + A +E DE + L+ A ++E + LP A+ M +G PKIPQV W DVGGLG K EI+DM++LPL+HPE+F G+++R+GILLYGPPGTG
Sbjct: 381 RLMRRLKRLSVMLHGAKGTGKRHMIAAAAAELGFHVYESSLTPLRGLPEDR----AAKKLRHILHEATQVAPCIVHLRHLQALA---PLAQGSEKPDDPEQVANVLKSFSQRNCLLVASTQSAEDVPTVI--------------RGCFTHEVSIEAP--DKDGRLAILEFLTDGKI--RLASDVSLESLAVRTAGRTANELRALFANAACAVANQAXXXXXXXXXXXXXXXXEAWSSVMVGANGHALNGSNGNGRAMTEASVADEDVVELSQAVIDEALEALPS-AAAMDIGAPKIPQVYWKDVGGLGHAKDEIMDMVQLPLQHPELFASGMRQRSGILLYGPPGTG 701
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A367JWZ6_RHIAZ (Peroxisomal assembly protein n=5 Tax=Rhizopus TaxID=4842 RepID=A0A367JWZ6_RHIAZ) HSP 1 Score: 128 bits (321), Expect = 2.240e-28 Identity = 112/326 (34.36%), Postives = 159/326 (48.77%), Query Frame = 1
Query: 232 LLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGA-LRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDEKELVLTLADLEE--GEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
L HGP + S+LV+ AE +G+HV ++ +L T A LR +FE A +PCV+ +R + +A +++ E E L L+T LE+ SA ++ CF HE+ AP EK RL +LK L + + V+ L LL + ++ LV++A AL R G + + E +G S S+ R+ + LT AD + GE R + + +G PKIP V WDDVGGL VK +ILD I+LPL+HPE+FG G+KKR+GILLYGPPGTG
Sbjct: 514 LFHGPRGSGKSTLVKEVAESIGVHVYEFSIYDILS-----DTDAKTEAYLRAKFEKAAAVAPCVMLIRHLEGLA---KKSAVVESGQEPL---LATVLEDCIKNVGSAHAATGYPVMIIATTGDIDTLPSSVLSCFKHEISIHAP--DEKARLQILKNLLYHSPLAPDVSLSNLATQTAALLAK---DLVDLVARAGVLALQRIDRGIHRE----TNESEEGSTEGPDMSMVTASDIRAAG---VTLTAADFDGALGEARA---SYSDSIGAPKIPNVTWDDVGGLAHVKDDILDTIQLPLEHPELFGSGLKKRSGILLYGPPGTG 813
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A8J9SNJ3_9CHLO (Peroxisomal biogenesis factor 6 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SNJ3_9CHLO) HSP 1 Score: 126 bits (317), Expect = 7.240e-28 Identity = 105/336 (31.25%), Postives = 163/336 (48.51%), Query Frame = 1
Query: 220 RPAVLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASV--AGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXX-----RRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEV--DLLGLSEALERVGRDGERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
R A+LLHGP+ + S+ V AAA LGLHV + G A A A+R F +AR SP VL L+ A++ A GA G++ A RLA +LS C+EE A + + RRCFTHE+ + LRL LL+ ++ ++ +DAL+ +A + G ++ +++ A+ +A R E+ D L+E ++ L ++ D + G + + + +G P++P V W+DVGGL VK IL+ ++LPL+HP +F QG+++R+G+LLYGPPGTG
Sbjct: 463 RTALLLHGPSGSGKSTTVHAAAAALGLHVIPFSCHEFSGQA----DTVAASAVRAAFRSARYFSPAVLLLQDFAALLDASGAPSG-GTQAAVSRLANALSECIEECSAPTEVSVQNQQRMDMEGRVVLVACASSIEDVAAPLRRCFTHEIGLETA--DQDLRLHLLQGSMRCESLPRTDQEDALKGVAAQTAGLLPIDLTAIMADAAASAATRHISVQEICTDAPPLAEPARHA------------------TDEVLQISAEDFDTGLGNMRR-RTAISIGAPQVPNVHWEDVGGLEDVKATILETVDLPLRHPHLFTQGLRRRSGVLLYGPPGTG 772
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: M5GA26_DACPD (AAA-domain-containing protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GA26_DACPD) HSP 1 Score: 123 bits (308), Expect = 1.040e-26 Identity = 104/324 (32.10%), Postives = 151/324 (46.60%), Query Frame = 1
Query: 229 VLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
VLL GP + A A+RLG+HV + ++G + G LR FE+A +PCVL LR + ++A S+ ++ S++T L E A+ SA + CF HE+ +P E RL +L+ LKG V V + A + L+ + ++ LV +A AL R A +L+ +++ + G S T + LA+ + + +G PKIP V WDDVGGL VK +ILD I+LPL+HPE+F G+KKR+GILLYGPPGTG
Sbjct: 400 VLLRGPRGVGKRTTALAVAQRLGMHVLDVNCYELVGES----EAVTEGTLRARFESAAACAPCVLLLRNLEALA------RTSQVLEQGREPSIATALRECVASLPSAWQESQFPVILLASSSEGDKIPLSIQACFKHEINFDSP--DEVERLEILRALLKGERVAADVELREIAAQSAALVAK---DLVDLVGRAKLGALER----ATKELVDEEASIDDIEDAGIALSGT-----------DFTSALAESRA--------SYSESIGAPKIPNVSWDDVGGLAEVKADILDTIQLPLEHPELFADGLKKRSGILLYGPPGTG 685 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig113.12.1 >prot_A-nodosum_M_contig113.12.1 ID=prot_A-nodosum_M_contig113.12.1|Name=mRNA_A-nodosum_M_contig113.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=400bp MVVSRCATELREGAPVCSAMPNAALYQRFVCRVQGYPDAAPKPPVDERCVback to top mRNA from alignment at A-nodosum_M_contig113:48763..51988- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig113.12.1 ID=mRNA_A-nodosum_M_contig113.12.1|Name=mRNA_A-nodosum_M_contig113.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3226bp|location=Sequence derived from alignment at A-nodosum_M_contig113:48763..51988- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig113:48763..51988- >mRNA_A-nodosum_M_contig113.12.1 ID=mRNA_A-nodosum_M_contig113.12.1|Name=mRNA_A-nodosum_M_contig113.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at A-nodosum_M_contig113:48763..51988- (Ascophyllum nodosum dioecious)back to top |