mRNA_A-nodosum_M_contig113.12.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig113.12.1
Unique NamemRNA_A-nodosum_M_contig113.12.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: D7FLK3_ECTSI (AAA ATPase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK3_ECTSI)

HSP 1 Score: 439 bits (1129), Expect = 1.120e-140
Identity = 260/449 (57.91%), Postives = 300/449 (66.82%), Query Frame = 1
Query:    1 MVVSRCATELREGAPVCSAMPNAALYQRFVCRVQGYPDAAPKPPVDERCVGSIVAAIAPLVGPETRRILA-ARSRPAVLLHGPATAEGS-SLVEAAAERLGLHVRTITMRAVLGVAAHGG-----TGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXX------------------------RRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSE-----ALERVGRD-------------GERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            MVVS+  TELREG P+CS +P    YQRFVCR  GYP    KPP DERCV ++VAA+AP+VGPE  R+L  ARSRPAVLLHGP  AEG  SLVEAAAERLG+HVRT+ MR+VLG A H G      GGA GALRQEF+AA EASPCVLHLRGI S+A GARQ PG EEADER   SLS CLE+ D+A A+A ++                                             RRCFTHEV A  P P EKLRLSLL++HL G    +C+T++AL+ LARRLLGRSA EI+TLV+ A   ALAR FGG  VD L ++E     A ++ GR               ER   +   EG      +LVLTL DLE+GEKRLP P+S+MKMGCPKIPQVKWDD+GGLGSVKREILD+IELPLKHPEVFG+GVK+RAGILLYGPPGTG
Sbjct:  406 MVVSQRVTELREGGPICSPVPETLRYQRFVCRANGYPCPEAKPPFDERCVEAVVAALAPVVGPEAFRLLVVARSRPAVLLHGPGAAEGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFAAGGAAGALRQEFQAAMEASPCVLHLRGITSLAAGARQDPGGEEADERFVESLSACLEKIDSAAAAAAATMPGEGRGSRRVQERGRSLPSSSYVAAGAVVLVGSAESLERVPVSLRRCFTHEVLA--PFPPEKLRLSLLEHHLGGVTTAECITREALKGLARRLLGRSATEIQTLVANAGGEALARSFGGPGVDWLAVAESEAAKAQQQNGRGRPSVVSGTAAAGGAERGGDSVGGEG---GRGKLVLTLTDLEKGEKRLPAPSSSMKMGCPKIPQVKWDDIGGLGSVKREILDVIELPLKHPEVFGKGVKRRAGILLYGPPGTG 849          
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A6H5JDF2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDF2_9PHAE)

HSP 1 Score: 420 bits (1079), Expect = 1.320e-134
Identity = 261/497 (52.52%), Postives = 303/497 (60.97%), Query Frame = 1
Query:    1 MVVSRCATELREGAPVCSAMPNAALYQRFVCRVQGYPDAAPKPP-------------------------------------------------VDERCVGSIVAAIAPLVGPETRRILA-ARSRPAVLLHGPATAEGS-SLVEAAAERLGLHVRTITMRAVLGVAAHGG-----TGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGA------------------------SATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEA----LERVGRD-------------GERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            MVVS+  TELREG PVCS +P  + YQ+FVCR  G+P  A KPP                                                  DERCV ++VAA+AP+VGPE  R+L  ARSRPAVLLHGP  A+G  SLVEAAAERLG+HVRT+ MR+VLG A H G      GGA GALRQEF+AA EA PCVLHLR I S+A GARQ PG EEADER   SLS CLEE D+A A                        S++S                      RRCFTHEV A  P P EKLRLSLL++HL G    +C+T++AL+ LARRLLGRS  EI+TLV+ A   ALAR FGG +VD L ++E+     +R GR               ERS  +   EG      +LVLTLADLE+GEKRLPPP+S+MKMGCPKIPQVKWDD+GGLGSVKREILD+IELPLKHPEVFG+GVK+RAGILLYGPPGTG
Sbjct:  346 MVVSQRVTELREGGPVCSPVPEISRYQQFVCRANGFPCPATKPPFALLRMEMSKISKCNGAVRAYIKQCGWSAVAGRCLHARTGNVARHDNSSTDERCVEAVVAALAPVVGPEAFRLLVVARSRPAVLLHGPGAAQGGGSLVEAAAERLGMHVRTVAMRSVLGSAPHAGGAGFAAGGAAGALRQEFQAAMEAYPCVLHLRAITSLAAGARQDPGGEEADERFVESLSACLEEIDSAAAAXXXTMPGEGRGSGRVQERGRSLPSSSSVAAGTVVLVGSAESLERVPASLRRCFTHEVLA--PFPPEKLRLSLLEHHLGGVTTAECITREALKGLARRLLGRSVTEIQTLVANAGGEALARSFGGPDVDWLAMAESEAAKAQRNGRGRSSVVSGAAAAGGAERSGDSVGGEG---GRGKLVLTLADLEKGEKRLPPPSSSMKMGCPKIPQVKWDDIGGLGSVKREILDVIELPLKHPEVFGKGVKRRAGILLYGPPGTG 837          
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A836CKR6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR6_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.840e-41
Identity = 145/451 (32.15%), Postives = 200/451 (44.35%), Query Frame = 1
Query:    4 VVSRCATELREGAPVCSAMPNAALYQRFVCRVQGYPDAAPKPPVDERCVGSIVAAIAPLVGPETRRILAAR--SRPAVLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAP--GSEEADERLAASLSTCLEEADAAGASA------------------TSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQD--ALQALARRLLGRSAAEIRTLVSKASDAALARFF------------------------GGAEVDLLGLSEALERVGRDG----ERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            VV+RCAT L +   V S +P+A     F C   G+P      P++      ++  +AP V  ET+  L +   + P +LLHGP      S++ AAA R G+ V  ++  A+    A G       AL     AA + +P +L +R +A  A         G+E+AD R         E+A AA   +                  +                        RCFTH + A  PLP E LRL+LL++HL  A +      D  AL A+ +R +GR + E+R LV  A+                                  + VD L  +E     G  G                        LTLADL  GE  L PP S++++G P IP V+W+DVGGL +VK EILD+IELPL+HPE+F  GVK+RAG+LLYGPPGTG
Sbjct:  221 VVARCATTLMQSGAVRSRVPDAFACHPFACAAAGHPXXXXXAPLNAVLSDGVLDVLAPAVAAETQSQLESGGGALPTLLLHGPRGVGKESVLRAAAARAGMSVVVLSAHAL----AEGD------ALAAALAAALDCAPALLLVRALAGAAXXXXXXXXQGAEDADARXXXXXXXXXEQALAAARGSCRDAREXXXXXXXXXXXXSGDGGCAVVLAATAEALDGVPPAQLRCFTHVLEA--PLPDEPLRLALLRHHLAAAALRAAADVDDAALSAVTKRTVGRVSGELRALVGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSGVDWLQDAEQALLAGASGGGXXXXXXXXXXXXXXXXXXXXXXLTLADLAAGEAALLPPNSSLRIGRPLIPNVRWEDVGGLAAVKGEILDVIELPLRHPEIFAAGVKRRAGVLLYGPPGTG 659          
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A7S2S106_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S106_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.800e-30
Identity = 112/328 (34.15%), Postives = 164/328 (50.00%), Query Frame = 1
Query:  229 VLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIAS---VAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDE-KELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            +LL+G  +     ++E AA + GLHV   ++  + G+        A   L+   +   + SPC++HLR I +   V  G+ Q    E+  E L +  S      +A   ++T S                     R CFTHE+   AP  S+  RL++L++    AN        +L++LA R  GR+A E++ L ++A+   L R           + +A   +       +    S+   QD+   LVLT   L E  + LP  AS M +G PKIPQV W DVGGLG  K EILDM++LPL+HPE+F  GV++R+GILLYGPPGTG
Sbjct:   54 ILLYGGKSTGKRHMIEKAARKFGLHVFEESLTPLRGLPEER----AAKKLKHILQQGTQVSPCIIHLRHIQALTPVPSGSEQPTDPEQLVEILKSFSSK-----NAILVASTQSVEDIPAVI-------------RGCFTHEIGIEAP--SKSGRLAILEFLT--ANRISLADDVSLESLATRTAGRTAMELKALFAEAACILLQRQPKVPTAQSSAMEDAWRNI-------TNNVTSDLSGQDDLPPLVLTQDILSEALEGLPS-ASAMDIGAPKIPQVYWKDVGGLGHAKDEILDMVQLPLQHPELFASGVRQRSGILLYGPPGTG 347          
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A7S2S103_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S103_9STRA)

HSP 1 Score: 132 bits (332), Expect = 7.980e-30
Identity = 112/328 (34.15%), Postives = 164/328 (50.00%), Query Frame = 1
Query:  229 VLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIAS---VAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDE-KELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            +LL+G  +     ++E AA + GLHV   ++  + G+        A   L+   +   + SPC++HLR I +   V  G+ Q    E+  E L +  S      +A   ++T S                     R CFTHE+   AP  S+  RL++L++    AN        +L++LA R  GR+A E++ L ++A+   L R           + +A   +       +    S+   QD+   LVLT   L E  + LP  AS M +G PKIPQV W DVGGLG  K EILDM++LPL+HPE+F  GV++R+GILLYGPPGTG
Sbjct:  376 ILLYGGKSTGKRHMIEKAARKFGLHVFEESLTPLRGLPEER----AAKKLKHILQQGTQVSPCIIHLRHIQALTPVPSGSEQPTDPEQLVEILKSFSSK-----NAILVASTQSVEDIPAVI-------------RGCFTHEIGIEAP--SKSGRLAILEFLT--ANRISLADDVSLESLATRTAGRTAMELKALFAEAACILLQRQPKVPTAQSSAMEDAWRNI-------TNNVTSDLSGQDDLPPLVLTQDILSEALEGLPS-ASAMDIGAPKIPQVYWKDVGGLGHAKDEILDMVQLPLQHPELFASGVRQRSGILLYGPPGTG 669          
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A507DMC3_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DMC3_9FUNG)

HSP 1 Score: 131 bits (329), Expect = 2.130e-29
Identity = 107/326 (32.82%), Postives = 161/326 (49.39%), Query Frame = 1
Query:  229 VLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDEKELVLTLADLEE--GEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            +LLHGP      +L  AAA+ LG+H+  ++   ++G +          AL + F+ A  A PC L LR + ++A  +      +E   ++A+ L+ CL+ A         +                     R  F HE++  +P  +E  RLS+L+  L+   VG       LQ LA +    +A +++ LVS+A+ +++ R           ++E LE+ GR        AR+         +V+   D E   G+ R      +  +G PKIP V WDDVGGL  VKR +LD I+LPL+HPE+F  GVKKR+GILLYGPPGTG
Sbjct:  550 ILLHGPRGVGKRALASAAADVLGIHIMIVSCFDLVGDS----ESKTEAALERVFDRAEVAVPCALVLRNVEALAKRSEVVETGQE--PKIASVLAACLKRAG----RVLETQGFPLLVIGTASDPGKMPTPIRTAFRHEIQVESP--AEAARLSILRNILRDVPVGP---DTDLQTLAEQTAALNARDLKDLVSRAAASSVVR-----------VTETLEKSGRFAS-DDDLARTG--------VVIIGKDFEMALGKARA---VHSDSIGAPKIPNVSWDDVGGLAHVKRTVLDTIQLPLEHPELFAGGVKKRSGILLYGPPGTG 837          
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A2R5GNQ2_9STRA (26S proteasome regulatory subunit 7 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNQ2_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.730e-29
Identity = 115/347 (33.14%), Postives = 170/347 (48.99%), Query Frame = 1
Query:  199 RILAARSRPAVLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEAD--ERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDA----ALARFFGGAEVDLLGLSEALERV-------GRDGERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            R++    R +V+LHG        ++ AAA  LG HV   ++  + G+        A   LR     A + +PC++HLR + ++A     A GSE+ D  E++A  L +  +      AS  S+                     R CFTHEV   AP   +  RL++L++   G       +  +L++LA R  GR+A E+R L + A+ A    A                EA   V         +G   +  A +E    DE  + L+ A ++E  + LP  A+ M +G PKIPQV W DVGGLG  K EI+DM++LPL+HPE+F  G+++R+GILLYGPPGTG
Sbjct:  381 RLMRRLKRLSVMLHGAKGTGKRHMIAAAAAELGFHVYESSLTPLRGLPEDR----AAKKLRHILHEATQVAPCIVHLRHLQALA---PLAQGSEKPDDPEQVANVLKSFSQRNCLLVASTQSAEDVPTVI--------------RGCFTHEVSIEAP--DKDGRLAILEFLTDGKI--RLASDVSLESLAVRTAGRTANELRALFANAACAVANQAXXXXXXXXXXXXXXXXEAWSSVMVGANGHALNGSNGNGRAMTEASVADEDVVELSQAVIDEALEALPS-AAAMDIGAPKIPQVYWKDVGGLGHAKDEIMDMVQLPLQHPELFASGMRQRSGILLYGPPGTG 701          
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A367JWZ6_RHIAZ (Peroxisomal assembly protein n=5 Tax=Rhizopus TaxID=4842 RepID=A0A367JWZ6_RHIAZ)

HSP 1 Score: 128 bits (321), Expect = 2.240e-28
Identity = 112/326 (34.36%), Postives = 159/326 (48.77%), Query Frame = 1
Query:  232 LLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGA-LRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDEKELVLTLADLEE--GEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            L HGP  +  S+LV+  AE +G+HV   ++  +L       T     A LR +FE A   +PCV+ +R +  +A   +++   E   E L   L+T LE+      SA ++                       CF HE+   AP   EK RL +LK  L  + +   V+   L      LL +   ++  LV++A   AL R   G   +    +   E    +G   S    S+ R+     + LT AD +   GE R    + +  +G PKIP V WDDVGGL  VK +ILD I+LPL+HPE+FG G+KKR+GILLYGPPGTG
Sbjct:  514 LFHGPRGSGKSTLVKEVAESIGVHVYEFSIYDILS-----DTDAKTEAYLRAKFEKAAAVAPCVMLIRHLEGLA---KKSAVVESGQEPL---LATVLEDCIKNVGSAHAATGYPVMIIATTGDIDTLPSSVLSCFKHEISIHAP--DEKARLQILKNLLYHSPLAPDVSLSNLATQTAALLAK---DLVDLVARAGVLALQRIDRGIHRE----TNESEEGSTEGPDMSMVTASDIRAAG---VTLTAADFDGALGEARA---SYSDSIGAPKIPNVTWDDVGGLAHVKDDILDTIQLPLEHPELFGSGLKKRSGILLYGPPGTG 813          
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: A0A8J9SNJ3_9CHLO (Peroxisomal biogenesis factor 6 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SNJ3_9CHLO)

HSP 1 Score: 126 bits (317), Expect = 7.240e-28
Identity = 105/336 (31.25%), Postives = 163/336 (48.51%), Query Frame = 1
Query:  220 RPAVLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASV--AGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXX-----RRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEV--DLLGLSEALERVGRDGERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            R A+LLHGP+ +  S+ V AAA  LGLHV   +     G A       A  A+R  F +AR  SP VL L+  A++  A GA    G++ A  RLA +LS C+EE  A    +  +                          RRCFTHE+        + LRL LL+  ++  ++     +DAL+ +A +  G    ++  +++ A+ +A  R     E+  D   L+E                        ++ L ++  D + G   +    + + +G P++P V W+DVGGL  VK  IL+ ++LPL+HP +F QG+++R+G+LLYGPPGTG
Sbjct:  463 RTALLLHGPSGSGKSTTVHAAAAALGLHVIPFSCHEFSGQA----DTVAASAVRAAFRSARYFSPAVLLLQDFAALLDASGAPSG-GTQAAVSRLANALSECIEECSAPTEVSVQNQQRMDMEGRVVLVACASSIEDVAAPLRRCFTHEIGLETA--DQDLRLHLLQGSMRCESLPRTDQEDALKGVAAQTAGLLPIDLTAIMADAAASAATRHISVQEICTDAPPLAEPARHA------------------TDEVLQISAEDFDTGLGNMRR-RTAISIGAPQVPNVHWEDVGGLEDVKATILETVDLPLRHPHLFTQGLRRRSGVLLYGPPGTG 772          
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Match: M5GA26_DACPD (AAA-domain-containing protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GA26_DACPD)

HSP 1 Score: 123 bits (308), Expect = 1.040e-26
Identity = 104/324 (32.10%), Postives = 151/324 (46.60%), Query Frame = 1
Query:  229 VLLHGPATAEGSSLVEAAAERLGLHVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASVAGGARQAPGSEEADERLAASLSTCLEEADAAGASATSSXXXXXXXXXXXXXXXXXXXXXRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDALQALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGRDGERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIPQVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG 1200
            VLL GP      +   A A+RLG+HV  +    ++G +         G LR  FE+A   +PCVL LR + ++A        S+  ++    S++T L E  A+  SA                        + CF HE+   +P   E  RL +L+  LKG  V   V    + A +  L+ +   ++  LV +A   AL R    A  +L+    +++ +   G   S T           +    LA+           + +  +G PKIP V WDDVGGL  VK +ILD I+LPL+HPE+F  G+KKR+GILLYGPPGTG
Sbjct:  400 VLLRGPRGVGKRTTALAVAQRLGMHVLDVNCYELVGES----EAVTEGTLRARFESAAACAPCVLLLRNLEALA------RTSQVLEQGREPSIATALRECVASLPSAWQESQFPVILLASSSEGDKIPLSIQACFKHEINFDSP--DEVERLEILRALLKGERVAADVELREIAAQSAALVAK---DLVDLVGRAKLGALER----ATKELVDEEASIDDIEDAGIALSGT-----------DFTSALAESRA--------SYSESIGAPKIPNVSWDDVGGLAEVKADILDTIQLPLEHPELFADGLKKRSGILLYGPPGTG 685          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLK3_ECTSI1.120e-14057.91AAA ATPase domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JDF2_9PHAE1.320e-13452.52AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CKR6_9STRA2.840e-4132.15P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2S106_9STRA4.800e-3034.15Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2S103_9STRA7.980e-3034.15Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A507DMC3_9FUNG2.130e-2932.82Uncharacterized protein n=2 Tax=Synchytrium endobi... [more]
A0A2R5GNQ2_9STRA2.730e-2933.1426S proteasome regulatory subunit 7 n=1 Tax=Hondae... [more]
A0A367JWZ6_RHIAZ2.240e-2834.36Peroxisomal assembly protein n=5 Tax=Rhizopus TaxI... [more]
A0A8J9SNJ3_9CHLO7.240e-2831.25Peroxisomal biogenesis factor 6 n=1 Tax=Coccomyxa ... [more]
M5GA26_DACPD1.040e-2632.10AAA-domain-containing protein n=1 Tax=Dacryopinax ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:48763..51988 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FLK3
Preferred namePEX6
PFAMsAAA
Model size1202
Max annot lvl2759|Eukaryota
KEGG koko:K13339
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0001302,GO:0001881,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007568,GO:0007569,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0015919,GO:0016042,GO:0016043,GO:0016054,GO:0016462,GO:0016558,GO:0016562,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017111,GO:0019395,GO:0019752,GO:0023051,GO:0030258,GO:0032502,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043112,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0044743,GO:0045184,GO:0046395,GO:0046907,GO:0046982,GO:0046983,GO:0048869,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0055114,GO:0065002,GO:0065007,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:1901575
Exons7
Evalue1.83e-141
EggNOG OGsCOG0464@1|root,KOG0736@2759|Eukaryota
Descriptionperoxisome organization
Cds size1200
COG categoryO
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.12.1prot_A-nodosum_M_contig113.12.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig113 48763..51988 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866528.1760676-CDS-A-nodosum_M_contig113:48762..489091680866528.1760676-CDS-A-nodosum_M_contig113:48762..48909Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 48763..48909 -
1680866528.1906414-CDS-A-nodosum_M_contig113:49369..496301680866528.1906414-CDS-A-nodosum_M_contig113:49369..49630Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 49370..49630 -
1680866528.2010622-CDS-A-nodosum_M_contig113:49860..499971680866528.2010622-CDS-A-nodosum_M_contig113:49860..49997Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 49861..49997 -
1680866528.2107298-CDS-A-nodosum_M_contig113:50220..504241680866528.2107298-CDS-A-nodosum_M_contig113:50220..50424Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 50221..50424 -
1680866528.222223-CDS-A-nodosum_M_contig113:50782..509421680866528.222223-CDS-A-nodosum_M_contig113:50782..50942Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 50783..50942 -
1680866528.2323341-CDS-A-nodosum_M_contig113:51359..515151680866528.2323341-CDS-A-nodosum_M_contig113:51359..51515Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 51360..51515 -
1680866528.2413173-CDS-A-nodosum_M_contig113:51853..519881680866528.2413173-CDS-A-nodosum_M_contig113:51853..51988Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 51854..51988 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig113.12.1

>prot_A-nodosum_M_contig113.12.1 ID=prot_A-nodosum_M_contig113.12.1|Name=mRNA_A-nodosum_M_contig113.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=400bp
MVVSRCATELREGAPVCSAMPNAALYQRFVCRVQGYPDAAPKPPVDERCV
GSIVAAIAPLVGPETRRILAARSRPAVLLHGPATAEGSSLVEAAAERLGL
HVRTITMRAVLGVAAHGGTGGAMGALRQEFEAAREASPCVLHLRGIASVA
GGARQAPGSEEADERLAASLSTCLEEADAAGASATSSAGGVVVLVGSAES
LERVPASVRRCFTHEVRARAPLPSEKLRLSLLKYHLKGANVGDCVTQDAL
QALARRLLGRSAAEIRTLVSKASDAALARFFGGAEVDLLGLSEALERVGR
DGERSSQTARSEGRSQDEKELVLTLADLEEGEKRLPPPASTMKMGCPKIP
QVKWDDVGGLGSVKREILDMIELPLKHPEVFGQGVKKRAGILLYGPPGTG
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mRNA from alignment at A-nodosum_M_contig113:48763..51988-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig113.12.1 ID=mRNA_A-nodosum_M_contig113.12.1|Name=mRNA_A-nodosum_M_contig113.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3226bp|location=Sequence derived from alignment at A-nodosum_M_contig113:48763..51988- (Ascophyllum nodosum dioecious)
ATGGTGGTGAGCCGATGCGCTACGGAGCTGCGGGAGGGAGCCCCGGTTTG CTCGGCGATGCCGAATGCTGCGTTGTACCAGCGCTTCGTTTGTCGTGTGC AGGGATACCCCGATGCTGCGCCCAAGCCGCCCGTTGTGAGTGCTGAGTGA CAAGTATAAATGCACCGTGCTTTTGGGTAGTCATGTGAAGATGTTAGTGT CATTGCAAGCTGAGAAAATAGCGGCGGTACTCTCTTTGCGTAAAGTATAC AAAATTGGTAGCGCGTGTCGGGATCTTGACTCAAGCTGGCTGGTCAATCC GAGATCGAGTCCCACGTGCGCATGTAGATTGACACGTCATGGCGTGGAGG ATCTCAAAACAACTCCGTGTGTCGGTAGGAATAGCACTTTTGAGCGCACT GAATCGCTGATCATTGAAACCTCTCCCTCCCTCACACCATGCTACCGCAC GATCTCTTGCCTTCGCGCGGCAGGATGAGCGATGCGTTGGTTCCATTGTT GCGGCCATTGCTCCTCTTGTCGGGCCAGAAACGCGTCGCATTCTGGCCGC GCGCTCGCGGCCGGCTGTGCTGCTACACGGGCCGGCCACGGCAGAAGGGA GTAGCCTCGTCGAGGCGGCGGCGGAGCGGGTGCGTTTTTGAGTCAGCGAG CAGATCCATGACCCGCAGCAATTTTCCTCTCTGCTGGGTTATATTTTGCG CTTGGATGTATCGTTTACGTTAAACCGGTCGCCTTAAAGCTACACTACGC GCTCGAACGAAGGCATAGCGCAGCGTAAAGAAGTTTACGTTTCAGATAAG GTTGATCCGAGGGTTTCGTCGTGTGGCTCTCCTTCTGTCGAGGTACGGGT ACGCCTTCAATGAACCTCCACTAGTCAATGCTGACATAATGCAGACTTCA CGCCCACACATGCTTCCCGGCGGGCCCTGACTCGTTGTTACTCTTATAAC GAATAATGCATAATCATGGACAAGCTCGCAGGGCTTGTCCTTTTAATATC TGGTCTTATTTTCCCATCTTTCCACACTTTGCTAACTCGAGAGCAGTTAG GCCTGCACGTTCGCACAATTACAATGCGGGCCGTTCTCGGAGTGGCGGCG CACGGCGGCACGGGCGGCGCGATGGGTGCGCTGCGGCAGGAGTTCGAGGC GGCCAGAGAGGCTTCGCCGTGCGTGCTGCACCTCCGCGGCATAGCCAGTG TCGCAGGTGATGGTCCACGAACGCTAGTGATCGCCTTGTGGCGCTCCTAC CCCAGCGCTACGCTGTTCACCATCTCAAAAATGAACATGCAGCCTTGCGG TAAACGAGCTTCCTGTCCACGCTTTGTCGTTAGCTTGGACTCTGATCACA GCGCCACCTTCCAAATCGGGTGTGGAGGGTTTCCACCTCCATGGAAGTCA TCAGGCTATCGAGCGCATATGTTCAAGTCTCATACCCTGTTCATCATCAC CCACACCCAATCACGAATCCCACAAAACGTCTCCCCCCACCTCCAAGACC CTACTGCTCCCTCTTTATACCGCGCCTTTCCTTGCCGTTGTCCGAAACTT ACGACTTCCAAAAGGCGGCGCTCGGCAGGCCCCCGGCAGCGAAGAAGCCG ACGAACGCCTCGCCGCCTCGCTCTCCACGTGCTTGGAAGAGGCAGACGCC GCTGGAGCGTCCGCAACCTCGTCCGCAGGAGGCGTCGTGGTTCTCGTCGG GAGCGCCGAATCGTTGGAGAGGGTGCCAGCGTCGGTCCGGCGGTGCTTCA CGCACGAGGTGCGCGCGCGTGTATGTATGTATGTATGTATGCGTGTATTT ATTAAATTGCACATAACCGCGCAATCCGGCGCTGTCGTACTAACCAATCG AAGTGTGTGTGTGTGTGTACGTGTGTGCGTGTGTGCGTGTGTGCGTGTGT GTGCGTATCTCTGTAGTTCGTGCGCTGTTTTCCGACTTCATCGGTATCAT CCCCCCTCCCCTCCCCAAACGCGCGCTTTCGCGGCAGGCAGGGGCGCCTC TTCCTTCGGAAAAGCTCCGCCTGTCCTTGTTGAAATATCACCTCAAGGGA GCCAACGTTGGGGACTGCGTGACTCAAGATGCTTTGCAGGCCCTGGCGAG ACGACTTCTGGGCCGTTCGGCCGCTGAGGTAATGGTGTACCCACCAGGTA GAGCGGAAGGAGGCACCAGTCATTTTCGCAGGCGGACGCCTCCCGCTTAT TGCCCACATATTTTTTCCCCCAGAGCGTGATCCTGCGAGAGACCTTCATG GGTCAGAAACGTAGCGGCGAGTCATCATGATCCTGCCGAACACTGGCATG CAACTATCGTGTGCCCCTTCCCTCTGGTGGTCCTTTGCGAACGAATCCAA AAATTCAGATACGAACCCTGGTGTCGAAAGCCAGTGATGCCGCGCTCGCG CGTTTCTTTGGTGGAGCGGAGGTGGACTTGTTGGGCCTCTCCGAAGCTCT CGAACGGGTTGGGCGAGACGGCGAACGAAGTTCCCAAACAGCACGGAGCG AGGGAAGGAGTCAAGACGAAAAGGAGCTGGTGCTGACCTTAGCGGATTTA GAGGAAGGGGAGAAGAGGCTTCCGCCCCCCGCCTCGACCATGAAAATGGG ATGTCCGAAGATACCACAGGTAGGGCCGGGCAGGCACGGTCCTGGGACGA GGGGCGTGGGAGTGAGACGAGCGATTCAAAAGTTCGGCGAAGTGAAGTTG ATGATACCGGTTATCGGTCCACCGCAGTAACCGCGCCAACCCGTCAAGGC CGAGGCAAGGGGGTCTACGCGCTGCACTGGCTTTCGTCGTTCCAGGAAAA GTTGTCGACACTACTTTTGACAAGAGTTATCATTCTACACCTGCCTCATC GTCTGTTCAGCGCGTTTCTATATCATCTACGCGCGGGACTTGTTACGCGA CTTTGCCGTCTGGCCCGGAGTGCCTAACGGGGCGCGTGCGCGCGAGATGA GACGCGTTTCTTGGCGGCAGCGCCCAATCGACGTGACATCTCTTTGCTCT GTAGAACAGCCCTCTTCGTCCTGCCTTCCGTCGTCGCTCTCTCGTTGCTT TTTGCGTCTTGCGCTCTGTCCTTGGCCAGGTCAAGTGGGACGATGTGGGA GGGCTAGGCTCGGTGAAGCGGGAGATCTTAGACATGATCGAGCTGCCGCT GAAGCACCCAGAAGTGTTCGGCCAAGGAGTGAAAAAACGGGCAGGGATTC TTCTTTACGGCCCTCCTGGCACTGGC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig113:48763..51988-

>mRNA_A-nodosum_M_contig113.12.1 ID=mRNA_A-nodosum_M_contig113.12.1|Name=mRNA_A-nodosum_M_contig113.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at A-nodosum_M_contig113:48763..51988- (Ascophyllum nodosum dioecious)
ATGGTGGTGAGCCGATGCGCTACGGAGCTGCGGGAGGGAGCCCCGGTTTG
CTCGGCGATGCCGAATGCTGCGTTGTACCAGCGCTTCGTTTGTCGTGTGC
AGGGATACCCCGATGCTGCGCCCAAGCCGCCCGTTGATGAGCGATGCGTT
GGTTCCATTGTTGCGGCCATTGCTCCTCTTGTCGGGCCAGAAACGCGTCG
CATTCTGGCCGCGCGCTCGCGGCCGGCTGTGCTGCTACACGGGCCGGCCA
CGGCAGAAGGGAGTAGCCTCGTCGAGGCGGCGGCGGAGCGGTTAGGCCTG
CACGTTCGCACAATTACAATGCGGGCCGTTCTCGGAGTGGCGGCGCACGG
CGGCACGGGCGGCGCGATGGGTGCGCTGCGGCAGGAGTTCGAGGCGGCCA
GAGAGGCTTCGCCGTGCGTGCTGCACCTCCGCGGCATAGCCAGTGTCGCA
GGCGGCGCTCGGCAGGCCCCCGGCAGCGAAGAAGCCGACGAACGCCTCGC
CGCCTCGCTCTCCACGTGCTTGGAAGAGGCAGACGCCGCTGGAGCGTCCG
CAACCTCGTCCGCAGGAGGCGTCGTGGTTCTCGTCGGGAGCGCCGAATCG
TTGGAGAGGGTGCCAGCGTCGGTCCGGCGGTGCTTCACGCACGAGGTGCG
CGCGCGGGCGCCTCTTCCTTCGGAAAAGCTCCGCCTGTCCTTGTTGAAAT
ATCACCTCAAGGGAGCCAACGTTGGGGACTGCGTGACTCAAGATGCTTTG
CAGGCCCTGGCGAGACGACTTCTGGGCCGTTCGGCCGCTGAGATACGAAC
CCTGGTGTCGAAAGCCAGTGATGCCGCGCTCGCGCGTTTCTTTGGTGGAG
CGGAGGTGGACTTGTTGGGCCTCTCCGAAGCTCTCGAACGGGTTGGGCGA
GACGGCGAACGAAGTTCCCAAACAGCACGGAGCGAGGGAAGGAGTCAAGA
CGAAAAGGAGCTGGTGCTGACCTTAGCGGATTTAGAGGAAGGGGAGAAGA
GGCTTCCGCCCCCCGCCTCGACCATGAAAATGGGATGTCCGAAGATACCA
CAGGTCAAGTGGGACGATGTGGGAGGGCTAGGCTCGGTGAAGCGGGAGAT
CTTAGACATGATCGAGCTGCCGCTGAAGCACCCAGAAGTGTTCGGCCAAG
GAGTGAAAAAACGGGCAGGGATTCTTCTTTACGGCCCTCCTGGCACTGGC
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