mRNA_A-nodosum_M_contig113.11.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig113.11.1
Unique NamemRNA_A-nodosum_M_contig113.11.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: D7FLK3_ECTSI (AAA ATPase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK3_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 3.940e-136
Identity = 238/314 (75.80%), Postives = 248/314 (78.98%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAG------------------------------SKDGDSDNQQGGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEINARELYLRPVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAAS                                 + G  ++            GE     TVFVIGATNRPDLLDPSLMRPGRFDRLLYLG+SGDR+TQ KVLRAITRKFGFEE+       LAEIV+DRIPPQFTGADLSAVASNALQLALRRRVAEIEA+VAE NARELYLRPVTPQQLLARL  D+LAVKVS+ED EAAC SVTPSVSEDELRHYERMRLQFSG
Sbjct:  851 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHRHQRHGQDESYXXXXXXXXDTVGEE----TVFVIGATNRPDLLDPSLMRPGRFDRLLYLGVSGDRETQTKVLRAITRKFGFEEEDSEHGVDLAEIVRDRIPPQFTGADLSAVASNALQLALRRRVAEIEAEVAETNARELYLRPVTPQQLLARLSEDELAVKVSREDLEAACLSVTPSVSEDELRHYERMRLQFSG 1160
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BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: A0A836CKR6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR6_9STRA)

HSP 1 Score: 311 bits (797), Expect = 4.580e-96
Identity = 181/285 (63.51%), Postives = 199/285 (69.82%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQGGGGGIDSRDGEAGASG-TVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEINARELYLRPVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKAVATECGL FFSVKGPELLDMYVGESERNVREVF QAR AAPCVLFFDELDSLAP RGRG DSGGVMDRVV+QLL+ELDG +                         AGA G  VFVIGATNRPDLLDPSL+RPGRFDRLLYLG  GD DTQ+KVL A TRKF FE+        LAE+ +  IP  FTGAD+SAVAS AL  AL+RR+AE+EA              V   QLL  L  D+L V+V++ED  +A  SV PSVS DELRHYER+R QFS 
Sbjct:  661 TLLAKAVATECGLAFFSVKGPELLDMYVGESERNVREVFRQARSAAPCVLFFDELDSLAPQRGRGADSGGVMDRVVSQLLSELDGVS-------------------------AGADGRAVFVIGATNRPDLLDPSLLRPGRFDRLLYLGTGGDTDTQLKVLSAATRKFTFEDGVS-----LAEVAR-AIPATFTGADMSAVASAALMAALKRRIAEVEAAARAAG--------VGAPQLLGALRGDELRVRVAREDLLSAAASVVPSVSADELRHYERLRAQFSS 906
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BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: W7TWL5_9STRA (Aaa atpase domain-containing protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWL5_9STRA)

HSP 1 Score: 288 bits (738), Expect = 7.700e-93
Identity = 172/296 (58.11%), Postives = 200/296 (67.57%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQGGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEIN------------ARELYLRPVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKAVATECGL F SVKGPELLDMYVGESERNVR+ FA+AR AAP VLFFDELDSLAP RGRG DSGGVMDRVVAQLL ELD  +S          ++GG GG   R+GE G    VFVIGATNRPDLLD SL+RPGRFDRLLYLG + D  ++  +L+A TRKF F ED D  D +       R+PP FTGAD SAVA+ AL  ALRRRVAE+E ++A +N              +L L        L+ L P++   +V +ED   A   V PSV+ +EL HYER+RLQFS 
Sbjct:   60 TLLAKAVATECGLAFLSVKGPELLDMYVGESERNVRQAFARARAAAPAVLFFDELDSLAPQRGRGSDSGGVMDRVVAQLLVELDAVSSG---------ERGGEGG---REGETGRQ-DVFVIGATNRPDLLDSSLLRPGRFDRLLYLGNTTDAGSRRAILQAATRKFPFGEDVDLSDVV------SRLPPNFTGADFSAVAAQALMRALRRRVAELEEELAVLNEGGEEGKEGGTGGGKLSLGT-----FLSHLSPEECVARVYQEDLLEAATKVAPSVAAEELAHYERLRLQFSS 331
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BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: K3X5H9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5H9_GLOUD)

HSP 1 Score: 284 bits (726), Expect = 2.700e-86
Identity = 155/285 (54.39%), Postives = 201/285 (70.53%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQGGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEINARELYLR-PVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKA+ATEC L F SVKGPELL+MY+GESE+NVR+VFA+AR   PC+LFFDELDSLAP RGRG DSGGVMDRVV+QLL E+DG +                       G +  +  VFVIGATNRPDLL+  L+RPGRFDRLLYLGI  ++  Q+KV++A+TRKF   ++ D     L E+V++ IP  FTGAD  A+ S+AL  AL+ RVA ++ Q+ EINA + Y   P+T + LLARLPP++L V V++E F +A + + PSVS  EL+HYE+++ Q+S 
Sbjct:  581 TLLAKAIATECNLNFLSVKGPELLNMYIGESEKNVRQVFAKARSCRPCILFFDELDSLAPMRGRGSDSGGVMDRVVSQLLTEIDGLS-----------------------GSSSGNDQVFVIGATNRPDLLETGLLRPGRFDRLLYLGICNEKAAQMKVVQALTRKFTLAKNVD-----LDEVVQN-IPLNFTGADFYALCSSALAAALKDRVAALDKQIEEINAEDCYSSSPMTVRMLLARLPPEELKVPVAQEHFLSALQQIVPSVSPAELQHYEKLKAQYSS 836
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BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: A0A4D9D6M2_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6M2_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.120e-85
Identity = 169/296 (57.09%), Postives = 195/296 (65.88%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQGGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEIN------------ARELYLRPVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKAVATECGL F SVKGPELLDMYVGESERNVR+ FA+AR AAP VLFFDELDSLAP RGRG DSGGVMDRVVAQLL ELD  +S            G GG    R+G       VFVIGATNRPDLLD SL+RPGRFDRLLYLG + D  ++  +L+A TRKF F ED D  D +       R+PP FTGAD SAVA+ AL  ALRRRVAE+E ++A +N              +L L        L+ L P++   +V +ED   A   V PSV+ +EL HYER+RLQFS 
Sbjct:  470 TLLAKAVATECGLAFLSVKGPELLDMYVGESERNVRQAFARARAAAPAVLFFDELDSLAPQRGRGSDSGGVMDRVVAQLLVELDAVSS------------GEGGXXXXREGGTERK-DVFVIGATNRPDLLDSSLLRPGRFDRLLYLGHTTDAGSRRAILQAATRKFPFGEDVDLSDVV------SRLPPNFTGADFSAVAAQALMRALRRRVAELEEELAVLNEGGEEGNEGGTGGGKLSLGT-----FLSHLSPEECVARVYQEDLLEAATKVAPSVAAEELAHYERLRLQFSS 741
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BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: A0A8K1CE64_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE64_PYTOL)

HSP 1 Score: 281 bits (719), Expect = 9.510e-85
Identity = 155/285 (54.39%), Postives = 194/285 (68.07%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQGGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEINARELYLR-PVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKA+ATEC + F SVKGPELL+MY+GESE+NVR+VFA+AR   PCVLFFDELDSLAP RGRG DSGGVMDRVV+QLL E+DG +S GS  GD                       VFVIGATNRPDL++  L+RPGRFDRLLYLGI  ++  Q+KV++A+TRKF   +D D       E V +  P  FTGAD  A+ S AL  AL+ RV + + Q+ E+NA + Y   P+T + LL RL P++LAV+V++E F  +   V PSVS  EL HYE++R Q+S 
Sbjct:  653 TLLAKAIATECNMNFMSVKGPELLNMYIGESEKNVRQVFARARSCRPCVLFFDELDSLAPMRGRGSDSGGVMDRVVSQLLTEIDGLSSGGSASGDQ----------------------VFVIGATNRPDLIESGLLRPGRFDRLLYLGICTEKAAQLKVVQALTRKFTLADDVD------LEAVVEHCPTSFTGADFYALCSGALAAALKDRVEQFDQQLEELNAADCYSSSPMTARVLLNRLSPEELAVRVAQEHFLTSLSQVVPSVSPAELLHYEKLRDQYSS 909
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BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: A0A3R6XLN9_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XLN9_9STRA)

HSP 1 Score: 259 bits (662), Expect = 4.240e-83
Identity = 147/285 (51.58%), Postives = 185/285 (64.91%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQGGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEINARELY-LRPVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKA+ATEC + F SVKGPELLDMY+GESE+NVR VF  AR A PC+LFFDELDSLAP RGRG DSGGVMDRVV+QLL E+D   S                              VFV+GATNRPDL++ +L+RPGRFDRLLYLGI  D+ TQ+KV++A+TRKF    D D  +A++A       P  +TGAD  A+ S AL LA++ RVA IE  +   N  ++Y  RP+    +L  + PD+L V+V+   F +A   V PSVS  EL HY+++R+QFS 
Sbjct:    7 TLLAKAIATECNMNFISVKGPELLDMYIGESEKNVRHVFQMARNARPCILFFDELDSLAPMRGRGSDSGGVMDRVVSQLLTEIDSNLSQ-----------------------------VFVVGATNRPDLIETALLRPGRFDRLLYLGICNDKPTQLKVVQALTRKFQLAPDVDL-NAVVA-----LCPFHYTGADFYALCSMALSLAIKDRVAAIELYIDTANQDDVYSARPLHVATVLDTMSPDELQVQVTHGHFASALPHVVPSVSASELAHYDKLRVQFSS 256
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BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: A0A225X435_9STRA (Peroxisome assembly factor n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X435_9STRA)

HSP 1 Score: 275 bits (704), Expect = 4.290e-83
Identity = 157/285 (55.09%), Postives = 195/285 (68.42%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQGGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEINARELYLR-PVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKA+ATEC L F SVKGPELL+MY+GESE+NVR+VFA+AR   PC+LFFDELDSLAP RGRG DSGGVMDRVV+QLL E+DG +               GGG D           VFVIGATNRPDLL+  L+RPGRFDRLLYLGI  ++  Q+KVL+A TRKF   ED D  DAI+     +  P  FTGAD  A++S+AL  AL+ RV  ++ Q+ EINA + Y   P+T + LL RL P++L V VS++ F +A   V PSVS  E++HYE ++ Q+S 
Sbjct:  581 TLLAKAIATECNLNFLSVKGPELLNMYIGESEKNVRQVFAKARSCRPCILFFDELDSLAPMRGRGSDSGGVMDRVVSQLLTEIDGLS---------------GGGNDQ----------VFVIGATNRPDLLETGLLRPGRFDRLLYLGICNEKSAQLKVLKAQTRKFTLAEDADL-DAIV-----EHCPTNFTGADFYALSSSALAAALKDRVEALDRQLEEINAEDCYSSSPMTIRLLLNRLSPEELRVPVSQQHFLSALSQVVPSVSPAEIQHYENLKKQYSS 834
[Close]
BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: A0A0W8C6E1_PHYNI (Peroxisomal biogenesis factor 6 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C6E1_PHYNI)

HSP 1 Score: 276 bits (706), Expect = 5.420e-83
Identity = 156/285 (54.74%), Postives = 191/285 (67.02%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQGGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEINARELYLR-PVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKA+ATEC L F SVKGPELL+MY+GESE+NVR+VFA+AR   PC+LFFDELDSLAP RGRG DSGGVMDRVV+QLL E+DG +               GGG D           VFVIGATNRPDLL+  L+RPGRFDRLLYLGI  D+  Q+KVL+A TRKF   ED D       + V +  P  FTGAD  A++S+AL  AL+ RV  ++ Q+ EINA + Y   P+T + LL RL P++L V V +E F  A   V PSVS  E++HYE ++ Q+S 
Sbjct:  637 TLLAKAIATECNLNFLSVKGPELLNMYIGESEKNVRQVFAKARSCRPCILFFDELDSLAPMRGRGSDSGGVMDRVVSQLLTEIDGLS---------------GGGNDQ----------VFVIGATNRPDLLETGLLRPGRFDRLLYLGICTDKSAQLKVLKAQTRKFTLAEDAD------LDAVVEHCPTNFTGADFYALSSSALAAALKDRVEALDKQLEEINAEDCYSSSPMTIRLLLNRLSPEELRVPVGQEHFMTALSQVVPSVSPAEIQHYENLKQQYSS 890
[Close]
BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Match: A0A0P1ANF4_PLAHL (Aaa-domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ANF4_PLAHL)

HSP 1 Score: 276 bits (706), Expect = 5.420e-83
Identity = 155/285 (54.39%), Postives = 192/285 (67.37%), Query Frame = 1 
Query:    1 TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVLFFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQGGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGISGDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAVASNALQLALRRRVAEIEAQVAEINARELY-LRPVTPQQLLARLPPDQLAVKVSKEDFEAACESVTPSVSEDELRHYERMRLQFSG 852
            TLLAKA+ATEC L F SVKGPELL+MY+GESERNVR+VFA AR   PC+LFFDELDSLAP RGRG DSGGVMDRVV+QLL E+DG  + G       N Q                  VFVIGATNRPDLL+  L+RPGRFDRLLYLGI  D+  Q+K+L+A TRKF    D D       + V +  P  FTGADL A++S+AL  AL+ RV  ++ Q+ EINA + Y L P+T ++LL +L P++L V VS++ F +A   V PSVS  E+ HYE ++ Q+S 
Sbjct:  637 TLLAKAIATECNLNFISVKGPELLNMYIGESERNVRQVFAMARNCRPCILFFDELDSLAPMRGRGSDSGGVMDRVVSQLLTEIDGLGNGG-------NDQ------------------VFVIGATNRPDLLESGLLRPGRFDRLLYLGICSDKSAQLKILKAQTRKFTLTNDTD------FKAVVELCPSNFTGADLYALSSSALAAALKDRVKALDRQLEEINAEDCYSLSPMTIRRLLNQLTPEELQVPVSQKHFISALSQVVPSVSPTEIEHYENLKRQYSS 890
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLK3_ECTSI3.940e-13675.80AAA ATPase domain-containing protein n=1 Tax=Ectoc... [more]
A0A836CKR6_9STRA4.580e-9663.51P-loop containing nucleoside triphosphate hydrolas... [more]
W7TWL5_9STRA7.700e-9358.11Aaa atpase domain-containing protein (Fragment) n=... [more]
K3X5H9_GLOUD2.700e-8654.39Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A4D9D6M2_9STRA1.120e-8557.09AAA domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A8K1CE64_PYTOL9.510e-8554.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R6XLN9_9STRA4.240e-8351.58AAA domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A225X435_9STRA4.290e-8355.09Peroxisome assembly factor n=1 Tax=Phytophthora me... [more]
A0A0W8C6E1_PHYNI5.420e-8354.74Peroxisomal biogenesis factor 6 n=7 Tax=Phytophtho... [more]
A0A0P1ANF4_PLAHL5.420e-8354.39Aaa-domain-containing protein n=1 Tax=Plasmopara h... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:43177..48493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FLK3
Preferred namePEX6
PFAMsAAA
Model size852
Max annot lvl2759|Eukaryota
KEGG koko:K13339
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0001302,GO:0001881,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007568,GO:0007569,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0015919,GO:0016042,GO:0016043,GO:0016054,GO:0016462,GO:0016558,GO:0016562,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017111,GO:0019395,GO:0019752,GO:0023051,GO:0030258,GO:0032502,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043112,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0044743,GO:0045184,GO:0046395,GO:0046907,GO:0046982,GO:0046983,GO:0048869,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0055114,GO:0065002,GO:0065007,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:1901575
Exons7
Evalue6.46e-137
EggNOG OGsCOG0464@1|root,KOG0736@2759|Eukaryota
Descriptionperoxisome organization
Cds size852
COG categoryO
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.11.1prot_A-nodosum_M_contig113.11.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig113 43177..48493 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866528.0854201-CDS-A-nodosum_M_contig113:43176..432571680866528.0854201-CDS-A-nodosum_M_contig113:43176..43257Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 43177..43257 -
1680866528.0981717-CDS-A-nodosum_M_contig113:44533..446471680866528.0981717-CDS-A-nodosum_M_contig113:44533..44647Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 44534..44647 -
1680866528.1089063-CDS-A-nodosum_M_contig113:44808..448921680866528.1089063-CDS-A-nodosum_M_contig113:44808..44892Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 44809..44892 -
1680866528.1192334-CDS-A-nodosum_M_contig113:45171..452701680866528.1192334-CDS-A-nodosum_M_contig113:45171..45270Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 45172..45270 -
1680866528.129196-CDS-A-nodosum_M_contig113:45954..462071680866528.129196-CDS-A-nodosum_M_contig113:45954..46207Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 45955..46207 -
1680866528.1374438-CDS-A-nodosum_M_contig113:47104..472591680866528.1374438-CDS-A-nodosum_M_contig113:47104..47259Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 47105..47259 -
1680866528.1457524-CDS-A-nodosum_M_contig113:48427..484931680866528.1457524-CDS-A-nodosum_M_contig113:48427..48493Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 48428..48493 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig113.11.1

>prot_A-nodosum_M_contig113.11.1 ID=prot_A-nodosum_M_contig113.11.1|Name=mRNA_A-nodosum_M_contig113.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=284bp
TLLAKAVATECGLPFFSVKGPELLDMYVGESERNVREVFAQARLAAPCVL
FFDELDSLAPARGRGGDSGGVMDRVVAQLLAELDGAASAGSKDGDSDNQQ
GGGGGIDSRDGEAGASGTVFVIGATNRPDLLDPSLMRPGRFDRLLYLGIS
GDRDTQIKVLRAITRKFGFEEDCDNGDAILAEIVKDRIPPQFTGADLSAV
ASNALQLALRRRVAEIEAQVAEINARELYLRPVTPQQLLARLPPDQLAVK
VSKEDFEAACESVTPSVSEDELRHYERMRLQFSG
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mRNA from alignment at A-nodosum_M_contig113:43177..48493-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig113.11.1 ID=mRNA_A-nodosum_M_contig113.11.1|Name=mRNA_A-nodosum_M_contig113.11.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5317bp|location=Sequence derived from alignment at A-nodosum_M_contig113:43177..48493- (Ascophyllum nodosum dioecious)
ACGCTGCTCGCCAAGGCTGTTGCGACCGAGTGCGGCCTGCCGTTCTTCAG
CGTCAAGGGCCCAGAGGTGAGCGGCACCGACAAAAATGAGCTGTGTGGAT
TGTCCCGTGACAAGCTTGCGACGTACACGCGTATCAAATGAAGCAACGTC
GCTTCGAAGAGTATAGACCGTCTTGCCCGTTCGCTGCTGCTTATATTACC
CCTCGGGCGAAAGGCATCGACCATTCATGAGTCTCAGGAGGTCCGATGCT
CTTTTGGTTTTTGTGAAAAATCTTTTGATTTTTATGAAGAGGCTTTTGAT
TTTTATGAAGATGCTTTTGATTTTTATGAAGAGGCTTTTGATTTTTATAA
AGAGTCTTCCTAAGACTCACGAATCACCGATGCTTTTCGCTCGAAGGCAA
TAGCAGCAGCAGCAACAGCAAACGGAAAAGGCGGTTTGGTTTAATACTCT
TTTTTTCGACGTTCATTCATCATTTCTAGTATATGTATGTACGTATGTAT
GGTCATCACATACAGCAGAGTATGGATCAACCGGGTAAGGTTGCCAATCC
TGCTCGTGGTCAGCTGAACAGGGAAAACAATATTCCCCTGTCCCCGTGCG
TGCCTGAGAATTTGGTCTCCCGAGACGGGTTCAGCCGTCCCGTCCCGCGT
CAGCCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGAGA
TTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATGAAATCGCCATACGCCA
TCGGGTCAGTCCCGAGTTTATCGGGTCACGCAAATGCGTACCGATGGCGT
TCACTGCGGAGAGTCCGCCGGCACAGGGCCAGTAAACCTCAATGTAGTTC
CGAACGGGTGCTGCCTTGGTAGGTCACCATGGACCAATTAATATAGAAGT
GAAGTGCCAAAACAATTCGACGACTTCACAGGAAACGCGCCTTCGTCTGA
GCTCTGTTTGCCGGTCTTGAGTATAAGGGCTACCAGGTAAATCATCATCT
CGCCCTTAGGCGGGGTTTCCTAGAGTGGCTACTCATGACGTCAGCATACG
CTCGGACTAACTTGAAATTTATTGCTCTCTCGATTTCGAGGAGAAAAAAA
AAAAAGGTTATATCGGAGCCAACACCCAGCTTCTCATCCGCCGACGTGCT
CGTACGCCTACCCCCCCCCCCGCGTCTTCCCATACCTCGGTTGCCCTTCA
AACACCAAACGGTGACCACCTCTATCCTGTTAAGCTCCTCGATATGTACG
TGGGCGAATCCGAGCGAAACGTGCGGGAGGTGTTCGCGCAGGCTCGCTTG
GCCGCGCCGTGTGTCCTCTTTTTCGATGAGCTCGACTCCCTCGCGCCGGC
CAGGGGACGGGGAGGGGACTCCGGGGGCGTCATGGACAGGTGGGCGTCGC
GGAGGGCTATGTCAGAAGAATCGACACGCCCTGCGCTAGGTGTAAACCTT
GGGTGTATCGCACTTGTATGTCCACTGTATTAATACTGAAACGAGGGGCG
CACATAAATTGGTGCATAAGTTTTGTGCCGGCGGACTCTCGGTGGCAAAC
GCCATCGGTACGCGATTGCGTCACCCTAAAACTCCGATGGCGGTTGACGG
TGTAGATGGACGTCGTGGCGGAATACTGTAAACCCGTGAGTAAGCAAAAT
ATTTAGCCTGGGTGCGGAGAATGGGTGGGCTTACGCGGGACGAGACGGCT
GAACCCGTCTCGCGAGATCCAATCCTCAGGCGCATTACTTTCCCCTTTCC
GCTGATCGCGAGCAGGATCGGCAGCCATGCCCGATTGATCCATTCTCTGC
CGAATGTGCTGACCATACATGCTGCAGCGATTGCTCAAATCGAATATGAG
CCACAGAACACTTAGTACTGTGAAAATAGATATGCGTTTTGTTCTGTTTT
GGTGTCCAGGTTGAGCGGCCGAACCCATTCGGGGGAGAAACCGACTCACG
AAAGCTTCTTGTGAATGACCCGATTTTTTCCGCGAACGACGCTTAAACTT
GTCATCCCCCGGCCAATGTATGCCTGCATGCAGCCCGTCCTTGTACGTAA
TCTGTCGAAAACCAGCTTCCTTATGTTACCTTTTGAGCCGCCTTCCCTGC
AAACAAGTTTTACCTGTCACGTTACCTACAAGACTCGCGATCCACCCGCC
CGCTCCTCGCCCTCCCCCTTTAAATCCCGCACGTAAATGCTCTCATCTGC
AAGCAATTCCAAACCATGAGCCCAAAAAAACCCGAGCCAAAACCTCTAAC
TGTAGTCCTTCCCGACCTCACCCTTTTGCTTCACAGAGTCGTGGCACAGC
TTCTGGCTGAGCTCGACGGAGCCGCTTCCGCGGGTTCCAAGGACGGTGAT
TCGGACAACCAGCAAGGAGGCGGGGGCGGGATCGACAGCAGGGACGGCGA
GGCCGGGGCATCGGGCACCGTGTTCGTGATCGGTGCGACCAACCGTCCGG
ATCTGCTGGACCCATCGTTGATGCGGCCCGGGCGTTTCGACAGGCTCTTG
TACCTCGGGATCAGCGGGGACCGCGACACCCAGATCAAGGTATAGTTAAG
GCGATAGGGCTCGGAAGGGTGCGTAAAACGCTTTGGCGTGATTCTCTTGC
CGCCTTACGGCTATTTCCTACCCTATTAATAATATCGTTCCTCTTCGTTG
ACCCGTTCAACGATTGGGGGAGGGGGCGGGGATGTAACAAATTTGTCCCC
GTTTTGGGAGGGAAGGGCACGAAAAAAGCTCCTACCGGGGACATATTTGA
CCACCCCCCTGGTCAAATGCGATGAATTCGGGGCAAGCTTGCCGACCATG
CAATGGATCATGTAGTCTTATCTCCGGAAGGGACTGTTTTGGTGACCTCC
CCGAAGACGAAATCGTCGTAACCCTGCACTCCCCAATCGTTGAACCTGTC
CGTTCGACTTTGAATTTTCTCGCGCCGTCACCCGCGCGTGGCTGCCACTG
CTCCCGACTATTGGGTCTCTATATAAAGGTGGTTGCGGTGGTGTCTGTGT
GGGCCCCGATGGAAGCCATCGTTTGCCACCGATGGTGGAATTCCATCCGG
TTACGTTTTGGGGGAGCCATAGCAGCGCAGTCTCGCGCGCTCGAGTGCTT
GATTTGCGGGTTTCCGAACTGCATCATCCCGACGAACCATCCCATGCTAT
TTCATTTTCCAGATCAAAGCACGAGCGATGCTTAATACTCTTTTTTAATC
CAGACCTCCGCTCGCAAAGACAGGTCCTAAGAGCCATCACGAGAAAATTC
GGTTTCGAGGAAGACTGCGACAACGGCGACGCCATCCTCGCGGAGATTGT
AAAAGATCGCATCCCTCCGCAGGTGGGTTCGCACGTGGCGTACGCGCCCA
CAAAAAGAGGGTTGGTTTTCTGATGTTGCAACCAGGCGCTTTCTTCAACA
GTCTCTTTTTTTTGAGACGAAAGTTGTTGAATCTCGAAGAGCTTTCCAGC
CTCTCCCGCGACGCCATTCGAGCAGTAGCACAGACTCCTCGGGAAAACGC
CTGCATTCCCATACAAAAGTACACTCGCACGCGTTTAGAGAAAAATATGA
ACTCATCTAAATCTTCTGAGCATTCTCCCTCCGGAACTCGAATGTGCGAA
GTTCACAGGAGCTGACCTGTCCGCTGTGGCGTCGAACGCGCTGCAGCTGG
CCCTTCGCCGGCGAGTGGCGGAAATCGAGGCTCAGGTGTGGCAGCACTCT
CCTCACTTCGATTCTCAAGTATAAAGTAGTGCTTGTTGTATCGTGGTTGG
TTAACACCACATAAAATGATAATCCTTGCTCTGACTGCAGAATCCACGGT
GCCTACTTGTCACACACCTTGATGTCCGATTTTTCACGAGGGGCAGGTGG
CAGAAATAAACGCGAGAGAGCTGTACCTGCGACCAGTCACTCCGCAGCAG
CTTCTGGCGCGCCTCCCCCCTGACCAGCTTGCCGTCAAGGTTTCCAAGGA
GGACTTCGAGGTGCGCTCTTATCTATAAGCTAAATACATCACCGTCTGCG
GGTTTTTGGTTATTTGATTAGATGCTCCCTAGATATTTATGTATACAACG
GGGTATTTATTTTGTATCTGTATCCGATCCTACAGTGTAGATACTGACGG
CAGCTAAAAGGAGAAAACACGCCGCGCGAATATAACTCCGTGCGAGGCAG
GGTATTTACCACCACCGATAACTGTCCTATACTAATCTAATCATCCTGCT
GTCACAACTCTACCACGTAGAGTGAATTACAAACACGTACCATACTGAGT
ACATCATGTAGATAACATACGGTAGTATAAAGTCCCTATGAGCTATTAGT
GTTTAAAGAAAAATCTAAATGTTGTAAAACGAAAATGTAATATTGTTGCC
AATTCTATATTATCATAACGTTATGTACCGGTACTACACTATAGCTCACA
GCATAACGTGGTATTTAAAGAAAAATCAGAATTGTTCGATCACACTTATT
ATCGAATACTATTATTACTAATAAGGTACTGTACTGATTTGTACTGTATA
CTGATAAATTATGTACAACCTATCTAATTATTATGTACTACGATTAAATC
GTTAGAACACAAACTTCGGCTTGACGGTCGACGAGGGAAAGGAATGGCTA
AATCCTTCTCGCGAGAAAAATTAAGGCAAGCACCGCAGAAAGAAGGTGGA
TAGAAAATCCTGTGTTACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCC
ATTGAAGTCCAGAATGAATGGGAAGAAAACACACACACACACACATGTTT
TTGGATGGTTTTGGTTGTGGTATGTACTATTACTACAATGTTTTTGTCTG
TAAAAGTTTTTTTCGGTGTTCCTGCATGGCGATTAATGTAAGTGTCCAGT
ATAACGGTGGGCTTCTCCCCGACATTATACTGTTGACCCAAGGTTACTAC
CATCGGGGACCCGTTTAAATACCATGGAGAGGTTTTGTTTTTGCAGCCTA
TGATCCCACCTAAGCGTTTCGACATTTTTTCCCCCTGTGTGGGATGCTCA
GAAGGATGCGTTCAGATTTTTCTTTACAAACTCCGTGCAAGGCAGGGACG
TTACACTTCGAACTCGCAAAAAAAAGACCTCAAATACAAGTTTCGACACT
GGCCTAATATTGGTCATAGTCGCACGATTTACATAATATCACCGTCGAAA
TAGTACTGTCAATAATTAAAGTTTCGTGAAAAACAGAGACTTCAATTCCA
ACCCGCGGGATATACGTTACGTGTGTCGCTGCGCAGGCGGCGTGCGAGTC
CGTGACGCCCTCTGTGTCAGAAGACGAGCTTCGGCACTACGAACGAATGC
GATTGCAGTTCAGCGGC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig113:43177..48493-

>mRNA_A-nodosum_M_contig113.11.1 ID=mRNA_A-nodosum_M_contig113.11.1|Name=mRNA_A-nodosum_M_contig113.11.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=852bp|location=Sequence derived from alignment at A-nodosum_M_contig113:43177..48493- (Ascophyllum nodosum dioecious)
ACGCTGCTCGCCAAGGCTGTTGCGACCGAGTGCGGCCTGCCGTTCTTCAG
CGTCAAGGGCCCAGAGCTCCTCGATATGTACGTGGGCGAATCCGAGCGAA
ACGTGCGGGAGGTGTTCGCGCAGGCTCGCTTGGCCGCGCCGTGTGTCCTC
TTTTTCGATGAGCTCGACTCCCTCGCGCCGGCCAGGGGACGGGGAGGGGA
CTCCGGGGGCGTCATGGACAGAGTCGTGGCACAGCTTCTGGCTGAGCTCG
ACGGAGCCGCTTCCGCGGGTTCCAAGGACGGTGATTCGGACAACCAGCAA
GGAGGCGGGGGCGGGATCGACAGCAGGGACGGCGAGGCCGGGGCATCGGG
CACCGTGTTCGTGATCGGTGCGACCAACCGTCCGGATCTGCTGGACCCAT
CGTTGATGCGGCCCGGGCGTTTCGACAGGCTCTTGTACCTCGGGATCAGC
GGGGACCGCGACACCCAGATCAAGGTCCTAAGAGCCATCACGAGAAAATT
CGGTTTCGAGGAAGACTGCGACAACGGCGACGCCATCCTCGCGGAGATTG
TAAAAGATCGCATCCCTCCGCAGTTCACAGGAGCTGACCTGTCCGCTGTG
GCGTCGAACGCGCTGCAGCTGGCCCTTCGCCGGCGAGTGGCGGAAATCGA
GGCTCAGGTGGCAGAAATAAACGCGAGAGAGCTGTACCTGCGACCAGTCA
CTCCGCAGCAGCTTCTGGCGCGCCTCCCCCCTGACCAGCTTGCCGTCAAG
GTTTCCAAGGAGGACTTCGAGGCGGCGTGCGAGTCCGTGACGCCCTCTGT
GTCAGAAGACGAGCTTCGGCACTACGAACGAATGCGATTGCAGTTCAGCG
GC
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