mRNA_A-nodosum_M_contig1124.23.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1124.23.1
Unique NamemRNA_A-nodosum_M_contig1124.23.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: D8LIK1_ECTSI (Prostaglandin E synthase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIK1_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 1.220e-134
Identity = 186/236 (78.81%), Postives = 215/236 (91.10%), Query Frame = 1 
Query:  559 LKSEKIIIYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIKFSEDYKKVPMLRIGGEVFKDSPVILKELIRRLRKDGVMSDEEHAVFCSPEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKGPFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSREGVAPWYQRMVTTLD 1266
            L+ E I +YQYKICPFCNKLKVV+D+ GIP+ VTEVNPLTKKEIKFSEDY+KVP++R+GGE+FKDSPVI+ ELI RLR+  VMSDEEHAVFCS +A+KWAEWADKQLAVLLFPNLTRNFSESYQAFSYV DV+TFSM+DK+SNQV+GS AMWAAQGKIKKKY+IDDEREAL++A+K+WTDAL    GPF GGD+PNLGD CVFGCI+AIEGL+THKDVL+R+GV  WYQ MV+TLD
Sbjct:   30 LEGEDITVYQYKICPFCNKLKVVMDFLGIPYSVTEVNPLTKKEIKFSEDYRKVPIVRMGGELFKDSPVIIDELIARLRETKVMSDEEHAVFCSSDAKKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVNDVDTFSMMDKISNQVIGSAAMWAAQGKIKKKYNIDDEREALFSAIKDWTDALREVDGPFFGGDRPNLGDLCVFGCIRAIEGLDTHKDVLARQGVGAWYQSMVSTLD 265
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: A0A835YKS9_9STRA (Prostaglandin E synthase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKS9_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.260e-96
Identity = 145/239 (60.67%), Postives = 180/239 (75.31%), Query Frame = 1 
Query:  550 GSQLKSEKIIIYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIKFSEDYKKVPMLRIGGEVFKDSPVILKELIRRLRKDGVMSDEEHAVFCSPEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKGPFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSRE-GVAPWYQRMVTTL 1263
            G+      I++YQYKICPFCNKLK V+D+ GIP+ VTEVNPLTKKEIKFS+DY+KVP++R+  +   DSP I++ L+  L+  G +S ++   F SP+A  WAEWADKQLAVLLFPN+TR+F ESYQAFSYVQ V TFS LDK +NQ LGS AMW AQGKIKKKY+I+DEREALY AL+ WT  ++  K  F GG  PNLGD CVFGC++AIEGL+ H + +  E  +A WY RM+  L
Sbjct:   37 GAVFADADIMVYQYKICPFCNKLKAVMDFLGIPYKVTEVNPLTKKEIKFSKDYQKVPIVRLDEQYLHDSPAIIQALLDGLKARGAVSKDQLDAFASPDAMNWAEWADKQLAVLLFPNITRSFGESYQAFSYVQGVSTFSALDKAANQALGSFAMWMAQGKIKKKYNIEDEREALYGALRQWTTEIQGKK--FSGGAVPNLGDLCVFGCLRAIEGLDAHTEAMQEEKALAEWYARMLGVL 273
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: W7TEG9_9STRA (Prostaglandin E synthase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEG9_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.600e-85
Identity = 133/231 (57.58%), Postives = 174/231 (75.32%), Query Frame = 1 
Query:  559 LKSEKIIIYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIKFSEDYKKVPMLRIGGEVFKDSPVILKELIRRLRKDGVMSDEEHAVFCSPEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKGPFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSREGVAPWYQRM 1251
            L+  +I +YQYKICPFC K+K VLD++ +P+   +VNPLTK EIKFS DY+KVP+ R+G EV +DSPVI+K +   L    V    +  VF SP+A +WAEWADK+LAVLLFPN+TR+F ES+QAFSYV +V  FS LDK+SNQ +G+TAMWAAQGKIKKKY+I DER AL+ AL+ WT   E G+ PF+GG +PN+GD  V+ CI AIEGL+  KD+++   ++ WY R+
Sbjct:  157 LEGLRITLYQYKICPFCCKVKAVLDFYKVPYETLDVNPLTKAEIKFSSDYRKVPIARLGQEVVRDSPVIVKRIADMLYAARVAPTRDLDVFFSPDAMRWAEWADKELAVLLFPNITRSFGESFQAFSYVNEVPHFSFLDKLSNQWVGATAMWAAQGKIKKKYNIADERTALFDALQRWT--REVGEKPFLGGTQPNVGDLGVYACIHAIEGLDAFKDLMANTDISEWYTRV 385
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: A0A7S0MFA7_9CRYP (Prostaglandin E synthase 2 n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFA7_9CRYP)

HSP 1 Score: 271 bits (692), Expect = 6.320e-84
Identity = 135/241 (56.02%), Postives = 169/241 (70.12%), Query Frame = 1 
Query:  559 LKSEKIIIYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIKFSED---------YKKVPMLRIGGEVFKDSPVILKELIRRLRKDGVMSDEEHAV-FCSPEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKGPFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSREGVAPWYQRM 1251
            L+S K+ +YQY+ICPFCNK+K VLD+  +P+   EVNPLTK E+ F++D         Y+KVP++RIGG+V  DSPV+L  L+  L K+GV+   + A  +  P+  +W  WADK+LAVLLFPNLTR  SESYQAF YV  V  FS LDK+SN++ GS AMW AQGKIKKKY I DER AL A+L  WTDA+  GK  F+GG  PNL D CVFG +++IEGL TH  VL    V PWY+RM
Sbjct:   53 LQSLKLEMYQYEICPFCNKIKAVLDFHKVPYKTIEVNPLTKSELSFTKDLPEDHPAHKYRKVPLVRIGGDVVADSPVVLDRLVEGLGKEGVIGAAQMARDYKDPKVAEWVRWADKELAVLLFPNLTRTLSESYQAFGYVDSVPHFSFLDKVSNRMAGSLAMWLAQGKIKKKYGITDERAALRASLDRWTDAI--GKSDFLGGASPNLADLCVFGTLRSIEGLETHAIVLRETQVGPWYERM 291
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: A0A7S1XY88_9STRA (Prostaglandin E synthase 2 (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XY88_9STRA)

HSP 1 Score: 264 bits (674), Expect = 3.060e-82
Identity = 128/229 (55.90%), Postives = 168/229 (73.36%), Query Frame = 1 
Query:  553 SQLKSEKIIIYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIKFSEDYKKVPMLRIGGEVFKDSPVILKELIRRLRKDGVMSDEEHAVFCSPEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKGPFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSREGVAPW 1239
            ++L    I+IYQYKICPFCNK+K +LDY+G+ +HV EVNPLTK + K   DYKKVP+  IGGE+  DSP I++ L  ++ +     D + A F S  AE+W E+ADK+LAVLLFPN+TRN++ESYQAFSYV DV TFS +DKMSN  +GSTAMW AQGK+KKKY I+DER+AL++A+  + +AL  G   F+GG  PN+GD  VFG I+AIEG++   D+ S   + PW
Sbjct:   12 AKLSELDIVIYQYKICPFCNKIKALLDYYGVDYHVIEVNPLTKAQTKAVTDYKKVPVANIGGEIVTDSPQIVRVLKAKMAE---ADDVDFAGFFSEAAEEWTEFADKKLAVLLFPNITRNWNESYQAFSYVNDVPTFSSMDKMSNLAIGSTAMWLAQGKLKKKYGIEDERDALFSAVTKFEEAL--GDNAFLGGANPNMGDIAVFGVIRAIEGMDAFNDLQSETKIGPW 235
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: A0A0M0JG54_9EUKA (Prostaglandin E synthase 2 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JG54_9EUKA)

HSP 1 Score: 258 bits (658), Expect = 3.780e-79
Identity = 123/229 (53.71%), Postives = 167/229 (72.93%), Query Frame = 1 
Query:  574 IIIYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIK-FSEDYKKVPMLRIGGEVFKDSPVILKELIRRLRKDGVMSDEEHAVFCSPEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKG--PFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSREGVAPWYQRM 1251
            ++IYQY+ICPFCNK+K +LD + +P+  TEVNPLTK EIK +S  Y+KVP+ ++G E   DS VI + L+ R+   GV+  ++ A F SP+A +WA+W+D++ AVLLFPN+TR+FSESYQAF YV  V  FSMLDK+SNQ++GS  MW AQGKIKKKY IDDER A+ A + +W   L  G G  PF GG +PN  D CVFGC+KAI+  + +K++++   + PWY R+
Sbjct:   45 VLIYQYEICPFCNKVKALLDLYRVPYETTEVNPLTKGEIKAWSGGYRKVPIAKLGDEQVNDSGVISQALLDRMGTAGVLDAKQLAEFRSPKALEWAKWSDEKFAVLLFPNITRSFSESYQAFGYVMSVPHFSMLDKVSNQIIGSFFMWMAQGKIKKKYGIDDERAAVVAGINHW---LNEGVGSKPFAGGKQPNFADVCVFGCLKAIDRTDAYKEIMAETAIKPWYDRV 270
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: A0A7S0IJQ6_9EUKA (Prostaglandin E synthase 2 n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IJQ6_9EUKA)

HSP 1 Score: 244 bits (623), Expect = 8.670e-74
Identity = 120/232 (51.72%), Postives = 161/232 (69.40%), Query Frame = 1 
Query:  580 IYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIKFSEDYKKVPMLRIGG------EVFKDSPVILKELIRRLRKDGVMSDEEHAVFCSPEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKGP--FMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSREGVAPWYQRM 1251
            ++QY ICPFCNK+K +LD   IP+   +VNPLTKKEIKFS++Y+KVP+  +GG          DSP+I   L+ R+     +  +E A F S  + +WAEW+DK+LAVLLFP +TR F+ES+QAF YV  V  FSM+DK+SNQV+G+ AMW AQGKIKKKY IDDE  A+  A+ +W   L+ G G   F GG KP+LGD  V+GC+KAI+  +T  ++++  GV PWY+RM
Sbjct:   52 LFQYDICPFCNKIKAMLDLHKIPYETVDVNPLTKKEIKFSKEYRKVPIAMLGGLEGSGAVQVNDSPLIADTLLERMELSKAVRSDELAHFRSATSLEWAEWSDKKLAVLLFPRMTRTFAESFQAFGYVMQVPHFSMVDKLSNQVVGAFAMWMAQGKIKKKYAIDDEAAAVREAIAHW---LKEGVGEASFAGGQKPHLGDVAVYGCLKAIDRTSTFSEIMAETGVKPWYERM 280
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: A0A7S0HU74_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HU74_9CRYP)

HSP 1 Score: 243 bits (619), Expect = 3.210e-73
Identity = 123/252 (48.81%), Postives = 169/252 (67.06%), Query Frame = 1 
Query:  574 IIIYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIKFSED---------YKKVPMLRIGGEVFKDSPVILKELIRRLRKDGVMSDEEHAVFCS----PEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKGPFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSREGVAPWYQRMVTTLDN*RVVKIS 1290
            I IYQY+ICPFCNK+K VLDY    +   EVNPL+KKEI F+ +         Y+KVP+  +G ++  DS +IL  ++ +L ++    +E+  + CS    P+ ++W  WAD++LAVLLFPNLTR FSES+QAFSYVQ V TFS+LDK+SN V G+TAMW AQGK+K KY I DER+AL  AL  W DAL+  + PF+GG  PNL D CVFG ++A++G  T + V+    V+ WY RM  ++    V +++
Sbjct:   43 IKIYQYEICPFCNKVKAVLDYCKFSYTTVEVNPLSKKEINFTRELPSDHACSNYRKVPIALVGEDLIADSSLILNAIVEKLSEE---KEEKIKLLCSSAKDPQVQEWVRWADQELAVLLFPNLTRTFSESFQAFSYVQQVPTFSLLDKLSNHVAGATAMWLAQGKLKSKYKISDERQALALALAKWADALD--RKPFLGGSSPNLADLCVFGVLRAVDGSAT-QTVIEESPVSDWYGRMRESVGERGVARVA 288
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: A0A8J5XKP9_DIALT (Prostaglandin E synthase 2 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKP9_DIALT)

HSP 1 Score: 243 bits (619), Expect = 4.390e-73
Identity = 116/233 (49.79%), Postives = 164/233 (70.39%), Query Frame = 1 
Query:  559 LKSEKIIIYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIKFSEDYKKVPMLRIGGEVFK--DSPVILKELIRRLRKDGVMSDEEHAVFCSPEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKGPFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSREGVAPWYQRM 1251
            L S  + +YQY+ICPFCNK+K VLDYF +P+   +VNPLTK E+KFS DYKKVP+L       +  DS  IL  ++ +L++ G +   E A F SPEA++W+ W DKQLAV ++PN+TR+F ES QAF+YV+DV  FS LDK++N+ +G+ AM  AQGKIKKKY+I DER  ++A L+ W+  +E G   F GGD+P+L D  V+GC++ I+  +TH  +++   + PWYQR+
Sbjct:   61 LASRALTLYQYEICPFCNKVKAVLDYFDVPYATVDVNPLTKAELKFSADYKKVPVLTAASPDLQLNDSADILAHVLTQLKEAGALP--ERAAFDSPEAQRWSAWVDKQLAVYIYPNITRSFHESQQAFAYVEDVPHFSALDKLANRYVGALAMVFAQGKIKKKYNIVDERAEMFAKLREWS--VEVGDRRFHGGDQPDLADLSVYGCLRGIKATSTHAQIMAETDLQPWYQRV 289
[Close]
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Match: A0A7S2C557_9EUKA (Prostaglandin E synthase 2 n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C557_9EUKA)

HSP 1 Score: 240 bits (612), Expect = 6.000e-72
Identity = 118/230 (51.30%), Postives = 154/230 (66.96%), Query Frame = 1 
Query:  580 IYQYKICPFCNKLKVVLDYFGIPHHVTEVNPLTKKEIK-FSEDYKKVPMLRIGGEVFKDSPVILKELIRRLRKDGVMSDEEHAVFCSPEAEKWAEWADKQLAVLLFPNLTRNFSESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDEREALYAALKNWTDALESGKGPFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVLSREGVAPWYQRMVTTLD 1266
            +YQY+ICPFC K+K +LD   +P+  TEVNPLTK EIK +S  YKKVP+  I GE   DSPVI  +++ RL   G +  +    F SP A +WA+W+D++LAVL FPN+TR F E+Y+AF YV  V  FS LDK +NQ +GS  MW AQGKIKKKY IDDEREA  + +  W      G  PF GG++PNL D  VFG +KAI+    H D+++   VAPWY+RM+  ++
Sbjct:   72 VYQYEICPFCCKVKALLDIHRVPYATTEVNPLTKSEIKAWSGGYKKVPIALIAGEQVNDSPVICTQILDRLAASGQIDKKLLDEFRSPSALEWAKWSDEKLAVLAFPNITRTFGEAYEAFGYVWGVPHFSQLDKAANQAIGSFFMWMAQGKIKKKYGIDDEREAFVSGVNKWMSEAV-GTTPFAGGERPNLADVAVFGLLKAIDRTAAHSDIMAATSVAPWYERMLEAVE 300
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1124.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIK1_ECTSI1.220e-13478.81Prostaglandin E synthase 2 n=2 Tax=Ectocarpus TaxI... [more]
A0A835YKS9_9STRA1.260e-9660.67Prostaglandin E synthase 2 n=1 Tax=Tribonema minus... [more]
W7TEG9_9STRA1.600e-8557.58Prostaglandin E synthase 2 n=2 Tax=Monodopsidaceae... [more]
A0A7S0MFA7_9CRYP6.320e-8456.02Prostaglandin E synthase 2 n=1 Tax=Cryptomonas cur... [more]
A0A7S1XY88_9STRA3.060e-8255.90Prostaglandin E synthase 2 (Fragment) n=1 Tax=Phae... [more]
A0A0M0JG54_9EUKA3.780e-7953.71Prostaglandin E synthase 2 n=1 Tax=Chrysochromulin... [more]
A0A7S0IJQ6_9EUKA8.670e-7451.72Prostaglandin E synthase 2 n=1 Tax=Calcidiscus lep... [more]
A0A7S0HU74_9CRYP3.210e-7348.81Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A8J5XKP9_DIALT4.390e-7349.79Prostaglandin E synthase 2 n=1 Tax=Diacronema luth... [more]
A0A7S2C557_9EUKA6.000e-7251.30Prostaglandin E synthase 2 n=1 Tax=Haptolina brevi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1124contigA-nodosum_M_contig1124:211708..217319 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIK1
PFAMsGST_C_2,GST_N_3,Glutaredoxin
Model size1509
Max annot lvl2759|Eukaryota
KEGG rclassRC00672
KEGG koko:K05309
KEGG ReactionR02265
KEGG Pathwayko00590,ko01100,map00590,map01100
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.88e-138
EggNOG OGsKOG3029@1|root,KOG3029@2759|Eukaryota
Ec32 ortholog descriptionGlutathione S-transferase, C-terminal-like
Ec32 orthologEc-18_003320.1
EC5.3.99.3
Descriptionprostaglandin-E synthase activity
Cds size957
COG categoryO
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1124.23.1prot_A-nodosum_M_contig1124.23.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1124 212023..217082 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866524.3797138-UTR-A-nodosum_M_contig1124:211707..2120221680866524.3797138-UTR-A-nodosum_M_contig1124:211707..212022Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1124 211708..212022 +
1680866524.4391432-UTR-A-nodosum_M_contig1124:217082..2173191680866524.4391432-UTR-A-nodosum_M_contig1124:217082..217319Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1124 217083..217319 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866524.3899639-CDS-A-nodosum_M_contig1124:212022..2120951680866524.3899639-CDS-A-nodosum_M_contig1124:212022..212095Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1124 212023..212095 +
1680866524.3992014-CDS-A-nodosum_M_contig1124:212337..2126121680866524.3992014-CDS-A-nodosum_M_contig1124:212337..212612Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1124 212338..212612 +
1680866524.4097872-CDS-A-nodosum_M_contig1124:215576..2158431680866524.4097872-CDS-A-nodosum_M_contig1124:215576..215843Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1124 215577..215843 +
1680866524.4220283-CDS-A-nodosum_M_contig1124:216250..2163101680866524.4220283-CDS-A-nodosum_M_contig1124:216250..216310Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1124 216251..216310 +
1680866524.4308045-CDS-A-nodosum_M_contig1124:216800..2170821680866524.4308045-CDS-A-nodosum_M_contig1124:216800..217082Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1124 216801..217082 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1124.23.1

>prot_A-nodosum_M_contig1124.23.1 ID=prot_A-nodosum_M_contig1124.23.1|Name=mRNA_A-nodosum_M_contig1124.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=319bp
MQALSRAGRASGRAIISHRHALGAVGGAGACVSAVTVHNQVAASQGPRVA
FCSAGEAATTAQATTTAGGGAGGASKQGGSQLKSEKIIIYQYKICPFCNK
LKVVLDYFGIPHHVTEVNPLTKKEIKFSEDYKKVPMLRIGGEVFKDSPVI
LKELIRRLRKDGVMSDEEHAVFCSPEAEKWAEWADKQLAVLLFPNLTRNF
SESYQAFSYVQDVETFSMLDKMSNQVLGSTAMWAAQGKIKKKYDIDDERE
ALYAALKNWTDALESGKGPFMGGDKPNLGDFCVFGCIKAIEGLNTHKDVL
SREGVAPWYQRMVTTLDN*
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mRNA from alignment at A-nodosum_M_contig1124:211708..217319+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1124.23.1 ID=mRNA_A-nodosum_M_contig1124.23.1|Name=mRNA_A-nodosum_M_contig1124.23.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5612bp|location=Sequence derived from alignment at A-nodosum_M_contig1124:211708..217319+ (Ascophyllum nodosum dioecious)
TTGACGAAGTACAGCTTGGCGTCTCGGGAAACGAATACCTGAGGCACGCA
TTCGATCCTAAAGACTGCAAGGAGGGCCACGTAAGAAGAAAGGTTGCGAA
AAGTCGCATGCGTTGTACATCCCTTGTAGCTGGGACTATGTGACTCAAGT
TCGTCAGTGAAACGTAGCGATCTAGGCAGTTGTCAGGGTTTCTCCACGAT
ACTACAGAAAAGGTTTATACTGGTTCTAAAAGCGTGTTTTTCAAACACCA
CTATTTTTCTTTACCCTTTTTTGCCACTTGCACTTTAGTCAAGAACTCGA
ATCAGGAGAGCAACGATGCAGGCGCTAAGCAGAGCAGGGCGTGCGTCAGG
GCGAGCAATTATCTCTCATCGACATGCTTTGGGAGCAGGTAAATTTTCCC
TGCGAAATGCAAAGTTAGACGGCGGCGAGCACGTGTAAACGTAGCACGGA
CAGCTCAGATGCATTCCACGTTCCCCGCTCTCTGTACGTCATTTACTGCC
TCGAGCTCACGAAAGCAAGTGAGCACCTCCACTGCCGAACTGTCGAAGTA
ACATGTTTTCGGGCGCCCATCTTCGGCAAGAGACTCCAGCTCTAGCTGTC
ATTCCCATTCATATCGCGCTTGTGCTCCAGTCGGTGGTGCAGGGGCGTGT
GTGTCGGCGGTAACCGTCCACAATCAAGTAGCGGCATCTCAGGGGCCACG
GGTCGCGTTTTGCTCGGCGGGTGAAGCGGCGACAACGGCGCAGGCAACGA
CCACGGCGGGGGGCGGGGCGGGAGGAGCAAGCAAACAGGGTGGAAGCCAG
CTGAAGTCGGAGAAGATAATCATTTACCAGTACAAGATATGCCCGTTTTG
CAACAAACTAAAGGTCGTGCTGGACTACTTCGGCATCCCTCATCATGTAA
CGGAGGTGAGGCATTCTCGGTGTCAACCTTCGCTTCTGAGTACTCGAACT
CGAAATCGTATACAAGTGTACCGTTTCTGCCGCCTCTCTGTGCAAGTATG
GAACAGGTGTGTGTTCGTTGTAAATATTAATAGTATTCTGGTTTTAGCAC
GGCAACTGTATGCAGGAAGTACAGTAGTAGTATCTTGTGTACGCACGACT
CGTACAAGTTGCCCTTCTGTCGCAGAGGCCTTGGAGAGTTTGTCCACGAA
AGCTAGGCTAGAGCTTGGTAGATCCTTTCTAGGCCCGCAGGTGGAGCATG
GTATCGTTGCATTTGATAAAACAGACAAAAAACTAGTAATATTATTAGTG
AAAAAGTTTCCTCTAGATTTCACGATGTTTTACTACATTACAGTAGACAA
GTGGGCTCGTGTGGCGAAGTAAATCGAGACAAAAAAAAAGAAGAGAACGA
AACCTCAAAATCTTACGGCAAAATACTGTTTTGACGTACTTTCATGCGAT
TATTTCTCTATACGCAGTACTCTATACTGTAATATTTAGTTTTCTACTTA
CAGGCATTGGCAGAGAGCTACGTGTGCAGCTTCTGCAGACGAAGTGTATT
TAGCGGATTCTGTTTCTGTCTGGTATCCAGGGGCGCTGACTGTGCTGAAC
GTGGCTATGTTTGTAGAGGGATGCGTTTGTCTTCTTTGGGAAGGGTCTGA
TCCCACTGCTTGAAATAGTTTCTGCCCATGGTCATCAAGTAGAACCATTG
ACAAGTACTCGTACGACGAATCCACAGGGCACCCTGGTGGGCTTAGCTTC
GCCCACAGAATCTCAAATCACCTTGTACTTATACTCTATTATGGTATTAT
TAATATTATACTAGTAGCAGTTATCCTGCCCCGTCGCTTTCTATCTGTAG
TAATATAGCTCTATAGTACTCCGTATAAAATAGAGCTGCTTCATGTGGAA
TTACGAGAGTTTAGAAGTGAATTGGTGTTAATTTGTATTTTCACGTAACT
TTGCTGTGGCCCAAGAGGACTATGTAATACTAATAGCGAGACTAATTATT
GCACAGGTAGCCAAGTTACTTTTTCGCAGGGACGGTACTTTTTTCGACAA
GGAAGTAAAAAAGTCAATCGACGATCGCTATATATAAGGTGATTGATTGT
TCCTCGTGCATCCACAGTAGTGTGACGCTTTCTTTCAACCTTTAGAGCTT
ATTCCTGTTCCTTTCTCTTTGTCGTTTTTTGTGTGTTTGTGTTTTTCTTT
TGCTCTCATTGGAGCTTGGTAGATGTTCCTCTGATCTTTTTCTGTCCAGC
AGACCACGTACCAGATTGGCAACCACGTGTATTACTGGGTATGGTTGAGG
CCCGATCGGTTAATGTGAAGAAAACAACAACAACAAGTCATAGCGCAATT
TTTTTAACAAGACAAGACAAAAATCTCGTCCTATACAGGAAATCGTACAT
TGAGGACGAAATGCTTGTAGGCTATACTGTAGCTCTTTTGTACCAGGTAT
TCGGTTATCGAGCGGAAAAGTTGAACATACGAGTATATATTCAGCGCGTT
TCAAATATGGTTTTGGTGCTGAGTTTCTTATTGAAGGTTCGGTCGTGGTT
TCGAGCCCCAGTCGTGTGAGGAAGACAACCTCGAGGGGGATAAATACTTT
GAACAACTGTTCATTTCGTACTAAACGGTGTTCTCTGGACGCGGATAAGT
TTAATACCCGGCATGTAAGTGTACAGTATAACATATAACGGTGGGCTTCT
CCCCGACATTATACTGTTGACCCAGTGTTGCTACCATAGGGGAACCCGTT
TACTGGGCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCA
ATTGCGTGACCCGATAAACTCGGGTCTGACCCGATGGCGTATGGCGGTTT
AAGTAAATAAATGGACCCCGTCGCGGAAATCGGGAGGGATCCCGTAAGGA
AGCACCTGAGTATGGAGATTAGCAGGCTGACGCGGGACGGGACTGCCGAA
CCCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGGGGACAGGGAAATAT
CCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGG
TTGATCCTTACTCTTGCTATATTTGATGACTATACATACATAAACATATA
CTACACCGCTTTGTTTGTGTCTCGTCGAGGACAGACACCTCCTTGAGTGA
AACATATCCCTGGGAATGGATCACACTATCCCAGCTTGATCTTCTCGGTA
GCTACTAATAATACATACCGTAGCTACCCACGACCTTTTCAAAGGTCCAT
TATTTTTGCTATAGAGGAAAAACTTGGGTAGGCGATTTTTTTTCTTGCAG
GGATATGACCAAACAGAATGTATAGTTCTACCACTGCTCTGACGCTCCAG
CAGTGAACTGTAGTTTGTACGGAGTATATAACTTGCTGCTTGTCTGCGTC
ATAGCGAACTCTCTGCGTCAGTTATGTTCTGCCGCGGCGATGTCTTACGC
AGTGAGCGGGAGATATTCGTAGATTTGGCACTATTCCCCCAACTTCCTCG
ATCAATAAGGAAATCTTCCCTCGGGCCCCATGGATTTCGTCAAGTTTCCC
CTGTCGTGGGTTTCCAATATACGGAGGCGGTAGCGCATTGTAACCAGCGC
GAACTTGCTCCTATCTAGACCGACGAGATATGCGATGTTGAAGCCAGGTA
TGTACGCGAGCCCCCCAAAACACGTCATTTTATCAAAAGCGGAAACCCCA
CATTGGCGTGTTTTATTTTTTTTCGAGTATGGGCGTGAAACCCCCCAGAT
ATGCGAAAATATACCAGGTATGATTCTGTATCGATTCGCGCCCTAGTTCT
TGACTCCTATCTCAGCATTCTACTTTTTACTTGTTGATGATCGCTTTCAT
TTGTTCTCGTCTCCACGATAACGTCGAAAAACGCCCACACCACATATTCG
TGCACATACAACGCGACAGGTGAACCCTTTGACGAAGAAGGAGATAAAGT
TCTCGGAAGATTACAAGAAGGTTCCGATGCTCCGCATAGGGGGTGAGGTG
TTCAAGGACTCGCCCGTGATCCTGAAAGAGCTGATCCGTCGCCTGCGGAA
GGACGGCGTTATGTCGGATGAGGAGCACGCGGTTTTCTGCTCGCCGGAGG
CGGAAAAGTGGGCGGAGTGGGCGGACAAGCAACTGGCGGTGCTGCTCTTC
CCAAATCTCACCAGAAATTTCTCGGAATCTTACCAGGTGTGCGGGCAAAC
TCGGAAAACATTTAAAGAGAACATCCCGCCGAATGCTTTCAAGACATCTC
GGAGTTCTGAATCCTTAGAAAAATTTTGCTCTCTTACAAAGTTCTGGAGG
GTTCATCTTGGCGGTGTTTTGAGATGAGATGCGGCAGGGCTGAAAACGAT
CTTAGACCTAGCCCCGAAATCCTGAGGCATTGATGCACCTCACCAAACCG
TGGCTCTCCACCTGCAGTATGCGCTTGTTACTGAGTGAACCTCTTACGCA
AGCGACTTTCTCAAAGACCCATTTCGGGCAACTCGTTTTTCAGGTCTCCT
CCCGAGCCTCGTTGGCTGCGGATTAACCGCTTATGGGCAGTTTCGCCTCG
TAACCTCTTGTGCCCGTCGCCCGTCGCGCGATCTACTACGCAGGCGTTTT
CGTACGTGCAAGACGTCGAAACGTTCAGTATGCTGGATAAGATGTCGAAT
CAGGTAAAGAATCTCAGATTTGTAACAAACTACGATGTGCCCATTCCCTT
GCTAAGTTTGTGTCTTTTCGGGAGAGAAAAAACGGGAAGATTTTGCCCTT
AATTAATTTACAATTTATTTTTTCGCCTACACCCGATTCACACGCAAGGA
TAGGGGATCGACCTGGACTGAAATCGTGGACTGCAAATCATACTACAGTA
CATCGTTCTAGATTGCCTGAACTGCCAAGCAACGGGCTGTATCGCAACTG
CTCCTTGTACGTGATTATTGGGGAAAAGCACTGGAGGATGCGTGTCGCTT
GCAAACCTTCGCAGGTTGGCCGCCTATACTCAACAAAATATTTGGGGCAC
CAATCGGCTGCCCGAACTCCCCGCTCCATCATCGCCACCTTGCGTTGTAG
AAACCCCCAATTTTGTTGTTGTCGCACACACTTTCCGAGCCCCCCCGCGC
AGTATCTGACGACGGCAGGGAAACGCACGTACAAACAAACCAGGTGTTGG
GATCGACAGCCATGTGGGCGGCTCAGGGCAAGATCAAGAAGAAGTACGAC
ATCGACGATGAGCGAGAGGCACTGTACGCCGCGCTGAAGAACTGGACCGA
TGCGCTCGAGAGCGGGAAGGGCCCCTTCATGGGGGGGGACAAGCCAAACC
TCGGCGACTTTTGCGTGTTCGGGTGCATCAAGGCCATCGAGGGGCTAAAC
ACGCACAAGGACGTTCTCTCCAGGGAAGGGGTTGCGCCGTGGTACCAACG
GATGGTGACCACGCTGGATAATTGAAGAGTAGTCAAGATTAGTACCACGA
AGATCAGTCAAGATTAGTGTAGATCGTTGAACCGTAGTGGGAGCATTGCG
TTTTCTGCTTTGAATCATCTTAAATCATCTTGAATCATCCTGTGTACTGT
ACCTTGCTGCGGTAGAGGACAGCGTCTAAATGTATGACTGTTTCTGTATT
TCCCGATGTTTTTTCCCCCCCCCCAGGCGCTCCTTTTTTTTGTTGGCTAT
CTCCTTCGTGGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1124:211708..217319+

>mRNA_A-nodosum_M_contig1124.23.1 ID=mRNA_A-nodosum_M_contig1124.23.1|Name=mRNA_A-nodosum_M_contig1124.23.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=957bp|location=Sequence derived from alignment at A-nodosum_M_contig1124:211708..217319+ (Ascophyllum nodosum dioecious)
ATGCAGGCGCTAAGCAGAGCAGGGCGTGCGTCAGGGCGAGCAATTATCTC
TCATCGACATGCTTTGGGAGCAGTCGGTGGTGCAGGGGCGTGTGTGTCGG
CGGTAACCGTCCACAATCAAGTAGCGGCATCTCAGGGGCCACGGGTCGCG
TTTTGCTCGGCGGGTGAAGCGGCGACAACGGCGCAGGCAACGACCACGGC
GGGGGGCGGGGCGGGAGGAGCAAGCAAACAGGGTGGAAGCCAGCTGAAGT
CGGAGAAGATAATCATTTACCAGTACAAGATATGCCCGTTTTGCAACAAA
CTAAAGGTCGTGCTGGACTACTTCGGCATCCCTCATCATGTAACGGAGGT
GAACCCTTTGACGAAGAAGGAGATAAAGTTCTCGGAAGATTACAAGAAGG
TTCCGATGCTCCGCATAGGGGGTGAGGTGTTCAAGGACTCGCCCGTGATC
CTGAAAGAGCTGATCCGTCGCCTGCGGAAGGACGGCGTTATGTCGGATGA
GGAGCACGCGGTTTTCTGCTCGCCGGAGGCGGAAAAGTGGGCGGAGTGGG
CGGACAAGCAACTGGCGGTGCTGCTCTTCCCAAATCTCACCAGAAATTTC
TCGGAATCTTACCAGGCGTTTTCGTACGTGCAAGACGTCGAAACGTTCAG
TATGCTGGATAAGATGTCGAATCAGGTGTTGGGATCGACAGCCATGTGGG
CGGCTCAGGGCAAGATCAAGAAGAAGTACGACATCGACGATGAGCGAGAG
GCACTGTACGCCGCGCTGAAGAACTGGACCGATGCGCTCGAGAGCGGGAA
GGGCCCCTTCATGGGGGGGGACAAGCCAAACCTCGGCGACTTTTGCGTGT
TCGGGTGCATCAAGGCCATCGAGGGGCTAAACACGCACAAGGACGTTCTC
TCCAGGGAAGGGGTTGCGCCGTGGTACCAACGGATGGTGACCACGCTGGA
TAATTGA
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