mRNA_A-nodosum_M_contig1124.22.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: D8LIK0_ECTSI (2OG-FeII_Oxy_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIK0_ECTSI) HSP 1 Score: 270 bits (691), Expect = 1.190e-82 Identity = 160/307 (52.12%), Postives = 187/307 (60.91%), Query Frame = 1
Query: 46 EWKNLHKRRLQIHGGIPHASGMVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEASLEFWASLEDAEADCAA-----------------------ASTVESDERELADMDSASD---ARRKRRRRDGETGTGTVKKRSLASVKCEHCSLIVFEGRAYNDVWHGIP------ASLASRE------------------------------DEQGP---------------ESRNRRLSFTVRRVARVISADSVVEHPEARSEMERRRLAFESSVSETG 735
EWK+L+KRRLQIHGG PH SGMVEEELPAFL+EVCDALVEAGVFPE PPNHVLLNEY+DGQGIGPHKDGPLY+ RVAILSLGKEA L+FW SLEDA+ADCA A T S++ + +SA+D R +RRR KR+L SVKCEHCSL+VFEG+AY + WHGI A++++ E DE P E+ +RLSFT+RRVARV+ ADSV+EH EARSEMERRR FE SV+ETG
Sbjct: 98 EWKDLYKRRLQIHGGTPHPSGMVEEELPAFLQEVCDALVEAGVFPESSPPNHVLLNEYSDGQGIGPHKDGPLYEGRVAILSLGKEAFLDFWGSLEDAKADCADIAAGATSGRAICAVPVSGLAAGDAFTSSSEDNSVFTDESATDDADGRAHQRRR--------AAKRALVSVKCEHCSLVVFEGKAYREAWHGIASTAGSGATMSATEAAPPARTEAEVATSGNISTIDDCVAAPQGADEVAPSFSGTVKGGDLGGVGEAAQKRLSFTIRRVARVVPADSVMEHSEARSEMERRRRGFERSVTETG 396
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: A0A7S1H8U6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H8U6_HEMAN) HSP 1 Score: 138 bits (347), Expect = 3.600e-35 Identity = 82/185 (44.32%), Postives = 94/185 (50.81%), Query Frame = 1
Query: 49 WKNLHKRRLQIHGGIPHASGMVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEASLEFWASLEDAEADCAAASTVESDERELADMDSASDARRKRRRRDGETGTGTVKKRSLASVKCEHCSLIVFEGRAYNDVWHGIPASLASREDEQGPESRN 603
W NL +RRLQ HGG PH GM E +P F+ + DA+VEAGVF D PPNHVLLNEY GQGI HKDGPLY VAILSLG A LEFWASL D + A ASV C+ SL+VF G AY+ +HGI +ED G + N
Sbjct: 6 WTNLKRRRLQNHGGTPHPEGMQPESVPKFIGSLMDAMVEAGVFQRDAPPNHVLLNEYRCGQGIMAHKDGPLYMPWVAILSLGSPAMLEFWASLSDTREEGA---------------------------------------EPAASVLCQPRSLLVFSGDAYDRHFHGIKER---QEDTPGTHTVN 148
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: A0A7S1GBR1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBR1_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.150e-34 Identity = 97/250 (38.80%), Postives = 113/250 (45.20%), Query Frame = 1
Query: 40 VAEWKNLHKRRLQIHGGIPHASGMVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEASLEFWASLEDAEADCAAASTVESDERELADMDSASDARRKRRRRDGETGTGTVKKRSLASVKCEHCSLIVFEGRAYNDVWHGIP-------ASLASREDEQGPE------SRNRRLSFTVRRVARVISA-------DSVVEHPEARSEMERRRLAFESSVSE 729
A W L KRRLQ++GG P A GM + LP F+ ALVEAGVF D PPNHVLLNEY GQGI PHKDGPLY VAILSL L+FW SLE + + A +ASV C SL+VF AY DVWH I + D G E + R+SFT+RRV V+ + D V EA E RR SVS+
Sbjct: 136 AAPWHPLRKRRLQMYGGTPAAEGMRAQPLPPFMHACARALVEAGVFAADAPPNHVLLNEYEPGQGIMPHKDGPLYHPVVAILSLRSSCCLDFWPSLEASSREGGA---------------------------------------PVASVLCRPRSLLVFREAAYTDVWHSIRERDADPITDTVANRDMLGLEVGDVVVREDTRVSFTIRRVLNVLPSSGDGDDGDDVPATAEAADEARRRHAQMLHSVSD 346
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: R1G822_EMIHU (AlkB, alkylation repair 6 n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G822_EMIHU) HSP 1 Score: 115 bits (287), Expect = 4.300e-26 Identity = 55/87 (63.22%), Postives = 61/87 (70.11%), Query Frame = 1
Query: 49 WKNLHKRRLQIHGGIPHAS--GMVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEA 303
W L RRLQ GG P +S GM E LP++++ VCD LV GVFP D+PPNHVLLNEY GQGI PHKDGPLY RVAILSL A
Sbjct: 100 WTQLRGRRLQSLGGTPSSSDGGMTREPLPSWVQSVCDELVRCGVFPHDQPPNHVLLNEYRPGQGIDPHKDGPLYAPRVAILSLSSRA 186
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: A0A7S3W3M6_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W3M6_EMIHU) HSP 1 Score: 117 bits (294), Expect = 4.790e-26 Identity = 57/91 (62.64%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 49 WKNLHKRRLQIHGGIPHAS--GMVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEASLEF 315
W L RRLQ GG P +S GM E LP++++ VCD LV GVFP D+PPNHVLLNEY GQGI PHKDGPLY RVAILSL AS F
Sbjct: 100 WTRLRGRRLQSLGGTPSSSDGGMTREPLPSWVQSVCDELVRCGVFPHDQPPNHVLLNEYRPGQGIDPHKDGPLYAPRVAILSLSSRASFLF 190
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: A0A7S2JKW1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JKW1_9EUKA) HSP 1 Score: 109 bits (273), Expect = 2.360e-23 Identity = 53/92 (57.61%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 46 EWKNLHKRRLQIHGGIPHA--SGMVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEASLEF 315
+W +L R+LQ GG P MV E LP++++ VCDALV AG+FP D PPNH L+N Y GQGI HKDGPLY RVAILSLG AS +F
Sbjct: 118 KWVSLRGRKLQCLGGTPKPPPDAMVPEPLPSWVQSVCDALVGAGIFPADAPPNHCLVNAYEAGQGITAHKDGPLYTPRVAILSLGSVASFDF 209
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: A0A6B2LER7_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LER7_9EUKA) HSP 1 Score: 106 bits (265), Expect = 1.050e-22 Identity = 82/247 (33.20%), Postives = 120/247 (48.58%), Query Frame = 1
Query: 40 VAEWKNLHKRRLQIHGGIP--HASGMVEEELPAFLREVCDAL--VEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEASLEFWASLEDAEADCAAASTVESDERELADMDSASDARRKRRRRDGETGTGTVKKRSLASVKCEHCSLIVFEGRAYNDVWHGIPASLA------------SREDEQGPESRN-RRLSFTVRRVARVISADSVVEHPEARSEMERRRLAFESSVSE 729
+W++L +RRL++ GG+P + GM+ P ++ E+ + ++ + ED+ NHVLLN+Y DG GIG HKDGPLY+ V +L+LG A+++F+ + +D DS S SV E SL++F G AYN+ +H I + +R + RN RRLS TVR V V S DS +E PE ++EM RR AF S+SE
Sbjct: 34 ATKWRSLTRRRLKMFGGVPVAYGGGMMPTPCPDWVMELFGIMEKIKRDLGREDKF-NHVLLNQYNDGMGIGAHKDGPLYEDIVFVLNLGGPAAIKFFENEKD--------------------KDSRS-----------------------WSVFLEERSLLIFSGDAYNNFYHEIEDTQEDVIDSTFLNIPLTRVNIGDVIKRNPRRLSLTVRTVKLVSSVDSFMETPEQKAEMIRREQAFYQSISE 236
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: A0A7S2IKL2_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2IKL2_9DINO) HSP 1 Score: 103 bits (258), Expect = 4.800e-22 Identity = 79/242 (32.64%), Postives = 103/242 (42.56%), Query Frame = 1
Query: 49 WKNLHKRRLQIHGGIPHASGMVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEASLEFWASLEDAEADCAAASTVESDERELADMDSASDARRKRRRRDGETGTGTVKKRSLASVKCEHCSLIVFEGRAYNDVWHGIPASLASREDEQGPESRNR---------------RLSFTVRRVARVISADSVVEHPEARSEMERRRLAFESSVSE 729
W L +RRL GG+PH GM+ E LPA+L V L G FP P N LLNEY QGI PH DGPL++ R A+LSLG A L F EA E +G + AS+ SL +F AY+ + HG+ A E+E G + NR RLS T+R+V RV P ++E +RRR + ++ E
Sbjct: 1 WIQLAQRRLLNLGGVPHPEGMIGEPLPAWLEPVVRRLAAIGAFPNGAP-NQCLLNEYGTSQGIDPHGDGPLFEPRAAVLSLGSPALLRFVQPPPQGEA--------------------------------REAASGAWYADTAASLVLNPGSLALFADEAYDSLLHGVAAVP---EEEIGQHTVNREAAGWPAGATVVRGPRLSLTLRQVRRVAVPAGEFLQPSQQAEAQRRRAWWARAICE 206
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: V4AYV7_LOTGI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AYV7_LOTGI) HSP 1 Score: 103 bits (256), Expect = 1.420e-21 Identity = 65/213 (30.52%), Postives = 101/213 (47.42%), Query Frame = 1
Query: 46 EWKNLHKRRLQIHGGIPHASGMVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEASLEFWASLEDAEADCAAASTVESDERELADMDSASDARRKRRRRDGETGTGTVKKRSLASVKCEHCSLIVFEGRAYNDVWHGIPASLASREDEQ-------------GPESRNRRLSFTVRRVARVI 645
+W +L RRLQ GG+PH GMV E++P +L CD + + +F E + PNHVL+NEY+ GQGI PH+DGPL+ V +SLG L+F+ + +A+ + E+ ++ D R + SV E SL++ + Y HGI D++ ++R R+S T+R V +V+
Sbjct: 32 KWTHLSNRRLQNWGGLPHPKGMVAEDIPQWLDLYCDKIGKLDLF-EGKKPNHVLVNEYSPGQGIMPHEDGPLFYPTVTTISLGSSTVLDFYTHINQGKAEDKSEPCSENMSKKFED-------------------------RHVCSVYLEPRSLVIVKDDMYTKYLHGIKEQTEDMVDDRICNIKQCSDINIDNIKTRQTRISLTIRLVPKVL 218
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Match: A0A087UC78_STEMI (Putative alpha-ketoglutarate-dependent dioxygenase ABH6 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087UC78_STEMI) HSP 1 Score: 102 bits (255), Expect = 1.580e-21 Identity = 66/212 (31.13%), Postives = 100/212 (47.17%), Query Frame = 1
Query: 46 EWKNLHKRRLQIHGGIPHASGMVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPLYDARVAILSLGKEASLEFWASLEDAEADCAAASTVESDERELADMDSASDARRKRRRRDGETGTGTVKKRSLASVKCEHCSLIVFEGRAYNDVWHGIPASLASREDEQ-----------GPE-SRNRRLSFTVRRVARVI 645
+WK L RRLQ GG+PH GM+EEELP +L++ + + +F ED+ PNHVL+NEY GQGI PH+DGPL+ +A ++LG L+++ + + +E + E + + S+ E CSL+V + Y+ HGI +E+ G E RN R+S T+R V +
Sbjct: 42 KWKILSNRRLQNWGGLPHPKGMIEEELPEWLKDYTKKVKDLDIF-EDKVPNHVLVNEYLPGQGIMPHEDGPLFYPTIATINLGSHTILDYYEKI----------NVLEHSKTE-------------------------TESNYVGSLLLERCSLLVVQHDLYHKYLHGIQEKEVDIINEKIKNLNACNNLVGCELKRNTRISLTIRHVPHTV 217 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1124.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1124.22.1 >prot_A-nodosum_M_contig1124.22.1 ID=prot_A-nodosum_M_contig1124.22.1|Name=mRNA_A-nodosum_M_contig1124.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=224bp MVEEELPAFLREVCDALVEAGVFPEDRPPNHVLLNEYTDGQGIGPHKDGPback to top mRNA from alignment at A-nodosum_M_contig1124:196409..199267- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1124.22.1 ID=mRNA_A-nodosum_M_contig1124.22.1|Name=mRNA_A-nodosum_M_contig1124.22.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2859bp|location=Sequence derived from alignment at A-nodosum_M_contig1124:196409..199267- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1124:196409..199267- >mRNA_A-nodosum_M_contig1124.22.1 ID=mRNA_A-nodosum_M_contig1124.22.1|Name=mRNA_A-nodosum_M_contig1124.22.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=672bp|location=Sequence derived from alignment at A-nodosum_M_contig1124:196409..199267- (Ascophyllum nodosum dioecious)back to top |