mRNA_A-nodosum_M_contig11216.1.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: A0A6H5KSE9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSE9_9PHAE) HSP 1 Score: 217 bits (552), Expect = 2.350e-54 Identity = 161/449 (35.86%), Postives = 213/449 (47.44%), Query Frame = 3
Query: 1350 RGEKLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAK----REIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSDLHSLIGHD-ELSRKTSHSQIIGLCRGGARGLQFLHEKGIVHGDVKLDNFLVSEDRRLCKVTDFGSAGPRNTALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAVLREPYGPMSEDVLSQHDDRLLPPD-------GVESVKIAQHNFDVLCDRADGTGRRADVKARGVAKLELRMLRYLYSGMSARLKGLDEYLLSHVVWEGMADLAHEAEVKKVLASMLDPDPRRRVCMATVAGALSRPRLWR----------------IKGE-----------DGGGMEERTLGPKPTD---LLCAIDQEISSKMT-------------DEPSWLAVAEATGND-WWKRVPVP 2528
+G KLGEGG G V L + + L+ GRGL LK +LKK KG + REIR+LAS MP H NI NVF T+ ++VME M DL L+ H E + S Q++ L G A GL F+HE G HGDVK N LVS D R CK++DFGS G A TLP+ PE +G +G + +MDVWS +V++QA R P +VL H +LP + E++ +A NF + A G +R +KA ++ LR +Y G A+ K LD+++LS VW H EV+KVL +ML DPR R+ M VA L P LW + G DG G L P P LL +D+ + M + PSWL V A + WW+ VP+P
Sbjct: 929 KGVKLGEGGGGEVFDLKIADEQLQGQFAAAGVGRGLVLK-TLKKPKKGKRDTGIREIRMLASFMPTCHPNITNVFATNIATRSIVMEKMHMDLEHLLNHPREGLDRVSQDQMVRLIYGAALGLNFMHEMGFAHGDVKPANMLVSNDLRECKISDFGSVGRLGVADVGDV--TLPFTPPEAMGVAKGWKVPLKASMDVWSFGMVVLQATSRVRRLPTDHEVLGDHIHSILPTERQSWIAQAHEAMMVANANFYYI---ACGRSKRTQIKASS----DIIRLREVYFGTYAKTKTLDDFILSRRVWPDQRVFRHLPEVRKVLGAMLAVDPRERINMKLVALFLRHPGLWSRTTTGLRAAASADAPGLPGAPTAATPSPSPGDGSGKTSLDLKPLPETAHTLLSVLDEAANHDMVFTADGQVVPGDRAEVPSWLEVEMARKDGAWWQNVPIP 1367
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: A0A8K0N052_COCNU (Putative LRR receptor-like serine/threonine-protein kinase n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0N052_COCNU) HSP 1 Score: 88.6 bits (218), Expect = 3.840e-14 Identity = 69/225 (30.67%), Postives = 109/225 (48.44%), Query Frame = 3
Query: 1359 KLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAKREIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSD----LHSLIGHDELSRKTSHSQIIGLCRGGARGLQFLHEKG---IVHGDVKLDNFLVSEDRRLCKVTDFGSAG---PRNTALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAVL---REPYGPMSEDV 1994
K+GEGG+G VHK L G + +A+KQ K +G + + + + H N++ ++G N +++ + + H+L G + K +C G ARGL +LHE+ IVH D+K N L+ +D K++DFG A NT +ST T+ Y APE A RG +T + DV+S +V+++A+ YGPM + V
Sbjct: 680 KIGEGGFGPVHKGVLPNGSV------------IAIKQLSPKSKQGNREFLNEIGMISALQHPNLVQLYGCCIEGNQLLLIYEYMENNSLAHALFGREGCQLKLDWQTRRKICLGVARGLTYLHEESRLKIVHRDIKATNILLDKDLN-AKISDFGLARLNEEENTHISTRIAGTMGYMAPEY--ALRGYLT---DKADVYSFGVVMLEAISGMSNANYGPMEDCV 886
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: I1L2F0_SOYBN (Protein kinase domain-containing protein n=11 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1L2F0_SOYBN) HSP 1 Score: 85.1 bits (209), Expect = 4.510e-13 Identity = 71/216 (32.87%), Postives = 111/216 (51.39%), Query Frame = 3
Query: 1353 GEKLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAKREIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSDL----HSLIGHDELSRKTSHSQIIGLCRGGARGLQFLHEKG---IVHGDVKLDNFLVSEDRRLCKVTDFGSA---GPRNTALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAVLREP 1970
G KLGEGG+G VHK L DGR +A+KQ + ++G + I +A++ H+N++N++G N ++ + + H++ G+ S S +C G ARGL +LHE+ IVH DVK N L+ + + K++DFG A + T +ST T+ Y APE A RG +T E +DV+S +V+++ V P
Sbjct: 688 GNKLGEGGFGPVHKGTLD------------DGRVIAVKQLSVQSNQGKNQFIAEIATISAVQHRNLVNLYGCCIEGNKRLLVYEYLENKSLDHAIFGN---CLNLSWSTRYVICLGIARGLTYLHEESRIRIVHRDVKSSNILLDLEF-IPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEY--AMRGHLT---EKVDVFSFGVVLLEIVSGRP 882
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: A0A6I9RDW7_ELAGV (probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1 n=3 Tax=Cocoseae TaxID=169705 RepID=A0A6I9RDW7_ELAGV) HSP 1 Score: 83.6 bits (205), Expect = 1.340e-12 Identity = 68/212 (32.08%), Postives = 103/212 (48.58%), Query Frame = 3
Query: 1353 GEKLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAKREIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSDLHSL----IGHDELSRKTSHSQIIGLCRGGARGLQFLHEKG---IVHGDVKLDNFLVSEDRRLCKVTDFGSAG---PRNTALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAV 1958
G K+GEGG+GSV++ L DG +A+KQ K +G + I + + H N++ ++G N +++ + + +SL G E K +C G ARGL FLHE+ IVH D+K N L+ +D K++DFG A NT +ST T+ Y APE A RG +T + DV+S +V ++ V
Sbjct: 680 GNKIGEGGFGSVYRGVLP------------DGSEIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGPQEYRLKLDWRTRRKICLGIARGLAFLHEESRIKIVHRDIKATNILLDKDLN-AKISDFGLARLDEEENTHISTRIAGTVGYMAPEY--AMRGYLT---DKADVYSFGVVALELV 873
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: A0A6P4B1W0_ZIZJJ (probable LRR receptor-like serine/threonine-protein kinase At1g07650 isoform X1 n=7 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4B1W0_ZIZJJ) HSP 1 Score: 83.2 bits (204), Expect = 1.760e-12 Identity = 67/212 (31.60%), Postives = 102/212 (48.11%), Query Frame = 3
Query: 1353 GEKLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAKREIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSD----LHSLIGHDELSRKTSHSQIIGLCRGGARGLQFLHEKG---IVHGDVKLDNFLVSEDRRLCKVTDFGSAG---PRNTALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAV 1958
G KLGEGG+GSV+K L DG +A+KQ K +G + + + + H N++ ++G +++ + + HSL G +E + S +C G A+GL FLHE+ IVH D+K N L+ D K++DFG A NT +ST T+ Y APE A G +T + DV+S +V ++ V
Sbjct: 696 GNKLGEGGFGSVYKGLL------------LDGTSIAVKQLSSKSKQGNREFVNEIGMISALEHPNLVKLYGCCIEGKQLILVYEYMENNSLAHSLFGPEEGKLELDWSTRQKICLGIAKGLAFLHEESTLKIVHRDIKASNILLDRDLNP-KISDFGLAKLDEEENTHISTRVAGTIGYMAPEY--ALWGYLT---DKADVYSFGVVALELV 889
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: UPI0010A41789 (probable LRR receptor-like serine/threonine-protein kinase At1g53430 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A41789) HSP 1 Score: 80.9 bits (198), Expect = 1.810e-12 Identity = 65/210 (30.95%), Postives = 104/210 (49.52%), Query Frame = 3
Query: 1359 KLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAKREIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSDLHSL----IGHDELSRKTSHSQIIGLCRGGARGLQFLHEKG---IVHGDVKLDNFLVSEDRRLCKVTDFGSAG---PRNTALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAV 1958
K+GEGG+G VHK+ +G L V+ +A+KQ K +G + + + + H N++ ++G +N +++ + + +SL G + +C G ARGL +LHE+ IVH D+K N L+ +D K++DFG A NT +ST T+ Y APE A RG +T E DV+S +V ++ V
Sbjct: 39 KIGEGGFGPVHKVNWLQGILSNGVV-------IAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVEENQLLLIYEYMENNSLARALFGGQGQKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-AKISDFGLAKLDEDENTHISTRIAGTIGYIAPEY--AMRGHLT---EKADVYSFGVVALEIV 235
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: A0A2I0WXB6_9ASPA (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WXB6_9ASPA) HSP 1 Score: 79.7 bits (195), Expect = 4.540e-12 Identity = 66/216 (30.56%), Postives = 111/216 (51.39%), Query Frame = 3
Query: 1341 ELIRGEKLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAKREIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSDLHSL----IGHDELSRKTSHSQIIGLCRGGARGLQFLHEK---GIVHGDVKLDNFLVSEDRRLCKVTDFGSAG---PRNTALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAV 1958
+ G K+GEGG+GSV+K G LK +G +ALK + +GA+ + + ++ H+N++ ++G N+ ++ + + +SL +G + + + S +C G ARGL FLHE+ IVH D+K N L+ +D K++DFG A P T +ST T Y APE A RG +T + D++S +++++ V
Sbjct: 21 DFFPGNKIGEGGFGSVYK-----GILK-------NGTKVALKVLSSESTQGAREFLSEITAISDIVHENLVKLYGVCMEGNSRILVYNYLENNSLAQTLLGSNHSNIQLSWRTRCKICIGVARGLAFLHEEVEPHIVHRDIKASNILLDKDFTP-KISDFGLAKLLPPNATHVSTRVAGTAGYLAPEY--AIRGQVTRKS---DIYSFGVLLLEIV 218
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: A0A835RJJ1_VANPL (Protein kinase domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RJJ1_VANPL) HSP 1 Score: 80.5 bits (197), Expect = 5.320e-12 Identity = 68/212 (32.08%), Postives = 108/212 (50.94%), Query Frame = 3
Query: 1353 GEKLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAKREIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSDLHSL----IGHDELSRKTSHSQIIGLCRGGARGLQFLHEK---GIVHGDVKLDNFLVSEDRRLCKVTDFGSAG---PRNTALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAV 1958
G K+GEGG+GSV+K G LK DG +A+K ++GAK + + ++ H+N++ + G N ++ F + +SL +G + + + + +C G ARGL FLHE+ IVH D+K N L+ +D K++DFG A P T +ST T+ Y APE A RG +N DV+S +++++ V
Sbjct: 143 GNKIGEGGFGSVYK-----GTLK-------DGTDVAVKVLSSYSNQGAKEFLSEITAISDIVHENLVKLHGICIEGNRRILVYNFLENNSLAQTLLGTNNSNIQFNWRTRYKICVGIARGLAFLHEEIVPYIVHRDIKASNILLDKDLTP-KISDFGLAKLLPPNATHVSTRVAGTIGYLAPEY--ALRGQ---VNRKSDVYSFGVLLLEIV 336
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: A0A803NX65_CANSA (Protein kinase domain-containing protein n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NX65_CANSA) HSP 1 Score: 79.3 bits (194), Expect = 9.180e-12 Identity = 71/212 (33.49%), Postives = 107/212 (50.47%), Query Frame = 3
Query: 1359 KLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAKREIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSDLHSLI------GHDELSRKTSHSQIIGLCRGGARGLQFLHEKG---IVHGDVKLDNFLVSEDRRLCKVTDFGSAG--PRN-TALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAV 1958
K+GEGG+GSVHK L++G L A + + R +G K EI V++ + H+N++ ++G N ++ + + +SL GH S + S +C G ARGL FLHE+ IVH D+K N L+ D K++DFG A P N T +ST T+ Y APE A RG +T D++S +++V+ V
Sbjct: 53 KIGEGGFGSVHKGRLKDGKLAAIKVLSAESR---------QGVKEFLTEIEVISKI---EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLLGGGHAYSSIQFSWQTRYKICVGVARGLAFLHEEVQPYIVHRDIKASNILLDRDLTP-KISDFGLAKLIPSNMTHVSTRVAGTIGYLAPEY--AIRGQLT---RKADIYSFGVLLVEIV 246
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Match: A0A1U8Q265_NELNU (probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8Q265_NELNU) HSP 1 Score: 78.2 bits (191), Expect = 1.270e-11 Identity = 64/212 (30.19%), Postives = 104/212 (49.06%), Query Frame = 3
Query: 1353 GEKLGEGGYGSVHKLALQEGPLKAAVMEVTDGRGLALKQSLKKGDKGAKREIRVLASLMPFSHQNIINVFGTSFVDNTVVMEAMFSDLHSL----IGHDELSRKTSHSQIIGLCRGGARGLQFLHEKG---IVHGDVKLDNFLVSEDRRLCKVTDFGSAG---PRNTALSTSTLPTLPYAAPEVVGAYRGAITAINEAMDVWSMAIVIVQAV 1958
G K+G+GG+GSV+K L +G L +A+K+ K +G + + + + H +++ ++G N +++ + + +SL G +E K +C G ARGL +LHE+ IVH D+K N L+ +D K++DFG A NT +ST T Y APE A RG +T + D++S IV ++ V
Sbjct: 65 GNKIGQGGFGSVYKGLLSDGTL------------VAVKKLSSKSKQGNREFLNEIGMISALHHPHLVKIYGCCTEGNQLLLVYEYMENNSLARALFGPEECHLKLDWPTRYKICIGIARGLAYLHEESTLKIVHRDIKATNILLDKDLNP-KISDFGLAKLDEEENTHISTRVAGTFGYMAPEY--AMRGHLT---DKADIYSFGIVALEIV 258 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11216.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11216.1.2 >prot_A-nodosum_M_contig11216.1.2 ID=prot_A-nodosum_M_contig11216.1.2|Name=mRNA_A-nodosum_M_contig11216.1.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=848bp MIYRVLLGGVVGAFALFPSILVELKPYIGPRPALDAQVPQPKIWTVKDLRback to top mRNA from alignment at A-nodosum_M_contig11216:1782..10164- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11216.1.2 ID=mRNA_A-nodosum_M_contig11216.1.2|Name=mRNA_A-nodosum_M_contig11216.1.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8383bp|location=Sequence derived from alignment at A-nodosum_M_contig11216:1782..10164- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11216:1782..10164- >mRNA_A-nodosum_M_contig11216.1.2 ID=mRNA_A-nodosum_M_contig11216.1.2|Name=mRNA_A-nodosum_M_contig11216.1.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=2544bp|location=Sequence derived from alignment at A-nodosum_M_contig11216:1782..10164- (Ascophyllum nodosum dioecious)back to top |