mRNA_A-nodosum_M_contig1117.7.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1117.7.1
Unique NamemRNA_A-nodosum_M_contig1117.7.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: D7FMG2_ECTSI (Cycloeucalenol cycloisomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMG2_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 2.490e-161
Identity = 238/321 (74.14%), Postives = 262/321 (81.62%), Query Frame = 3
Query:  153 GGMGSASPWLGDADVAQVMAAILACLGTTLGGLLLTLTPKKIPNDGSHRSTWLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPIFAFPLLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEEWPDQTR-KQYDATRG-SIEGLWSAALNAMGAGMLILCLLDFVRLAVGADIVMKG 1109
            G     SP  GD DV   M AILAC+ +TLG LLLTLTPK     GS   TWLACA+ NPAKR WEVFNL YA+FWVGCFAAII FSLYE FDEV+Y VVCFGL +PI AFPL+S+HPSEA L VGQR+GV+ANVWIA+YSFIGNYWYTHYFY VLGAKYTFPSWRLNDVPI LI AT+FYFSLYH LSNMAIRKVVTSFEA  +R  TLVVL+GVMSYA AF ETLTISGFPYY+FEDR MAYVVGSAFYGIYF+VSFPMFYAF+EWP +   K  D   G S  GLW AA++++GA MLILCLLDFVRLAVG++  MKG
Sbjct:   46 GSFTMGSPRFGDIDVGMAMTAILACMASTLGALLLTLTPKDSKRGGS---TWLACAKTNPAKRAWEVFNLRYAVFWVGCFAAIIGFSLYEDFDEVSYMVVCFGLSLPIVAFPLVSMHPSEAGLAVGQRYGVRANVWIAIYSFIGNYWYTHYFYCVLGAKYTFPSWRLNDVPIPLIAATVFYFSLYHALSNMAIRKVVTSFEATTSRAVTLVVLVGVMSYAVAFTETLTISGFPYYEFEDRDMAYVVGSAFYGIYFVVSFPMFYAFDEWPQEDENKLADRKAGNSARGLWGAAVDSLGASMLILCLLDFVRLAVGSEFFMKG 363          
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: A0A836CJT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT1_9STRA)

HSP 1 Score: 320 bits (819), Expect = 3.290e-101
Identity = 175/324 (54.01%), Postives = 209/324 (64.51%), Query Frame = 3
Query:  186 DADVAQVMAAILACLGTTLGGLLLTLTPK-----KIPNDG------SHRSTWLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPIFAFPLLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEEWPDQTRKQYDATRGSIEGLWSAALNAMGAGMLILCLLDFVRLAVGA--DIVMKG*DG 1118
            D  + Q M AILA L   L  L  T+T +     K  +DG      S RS WLA    N AKR WEVFNL Y + W+  FA I+ F +Y+    V Y VVC GLCVPI   PL+    S+  LP+ +RFGV+AN+W+A+YSFIGNYWYTHYFY VL A Y+ P WRLNDVPI L  AT FYF  YH LSN+A+RKVVT++  NAAR+  LV L+  MSY  AFMETLTIS +P Y FEDR MAY +GSAFYGIYFIVSFPMFY F+EWP Q ++           LW   +++MG GM IL LLD VRLA G    I ++G  G
Sbjct:    2 DRPIEQTMCAILAGLAGLLFVLHTTMTKRDSGRHKKRDDGLVTESTSVRSCWLADPVTNSAKRAWEVFNLCYGVVWIAVFAYIVYFGVYKDLTRVGYMVVCGGLCVPILLSPLVMPSKSDKKLPLLERFGVRANLWMAIYSFIGNYWYTHYFYCVLRASYSMPCWRLNDVPIQLYFATFFYFCFYHSLSNLALRKVVTTYVHNAARSVFLVALVLAMSYFVAFMETLTISAYPDYSFEDREMAYKLGSAFYGIYFIVSFPMFYRFDEWPQQLKQP---------SLWQTCVDSMGTGMAILTLLDAVRLATGVPLQIPLEGASG 316          
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: F0Y312_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y312_AURAN)

HSP 1 Score: 297 bits (761), Expect = 6.290e-93
Identity = 155/295 (52.54%), Postives = 196/295 (66.44%), Query Frame = 3
Query:  225 CLGTTLGGLLLTLTPKKIPNDGSHRSTWLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPIFAFP-LLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEEWPDQTRKQYDATRGSIEGLWSAALNAMGAGMLILCLLDFVRLAVGADIVMK 1106
            CL      +LL +  + +P   + R TWLA  + N  KR  E++ LAYA+ W+G FA I+ F  YE FD +AYF+VC GL +P++A P LL     +   P+ +R+  KANVW+A++ F+GNYWYTHYFYSVLGA YT P+WRLNDVP+A+  AT FYF  YHVLSN A+RK+ TS+E +  R       I  MSY TAFMETLTISGFPYY FEDR MAY VGSAFYGIYF+VSFPMF   +E P           G+   L++ A+ A+ + M +LCLLDFVRLA+G    MK
Sbjct:    2 CLILAAQAVLLVVLQRCVPRP-TGRGTWLA-PKTNAPKRATELWFLAYAVVWIGAFACIVGFEWYERFDALAYFLVCGGLALPLYAQPFLLPALTYDERRPLAERYSFKANVWLAIFGFVGNYWYTHYFYSVLGAAYTMPAWRLNDVPVAMFFATHFYFCFYHVLSNAALRKIRTSYEPSKRRLAFEAASIVAMSYLTAFMETLTISGFPYYSFEDRDMAYTVGSAFYGIYFLVSFPMFLRLDETPPTV------VNGATHDLFATAVEALASSMAVLCLLDFVRLALGIPFAMK 288          
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: A0A7S2V4D0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4D0_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.490e-92
Identity = 162/301 (53.82%), Postives = 196/301 (65.12%), Query Frame = 3
Query:  201 QVMAAILACLGTTLGGLLLTLTPKKIPNDGSHRSTWLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPIFAFPLLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEEWPDQTRKQYDATRGSIEGLWSAALNAMGAGMLILCLLDFVRLAVGADIVM 1103
            ++ A IL CL          L  + + ++      W+A +E NP KR +E+F L Y   W+G FA I+   +YE+  EV Y VVC GLC+P+F +P          +P+ +R+  KANVW+A+YSFIGNYWYTHYFYSVL A YTFPSWRLNDVPI L  AT FYFS YHV SNMAIRKVVTSF+   AR F L  LI  MSY TAF ETLTIS FPYY FEDR MAY VGSAFYGIYFIVSFPMFY   E       + +A +G   G     ++++GAGMLIL LLD VRL +G  + +
Sbjct:    3 EIFAGILTCL---------FLLYQSLKSNEKSSGCWIASSE-NPPKREYELFCLYYTPIWIGIFAFIVVAQVYESMAEVEYMVVCGGLCIPLFLYPHFC--SESKTVPLAERYSFKANVWLAIYSFIGNYWYTHYFYSVLKASYTFPSWRLNDVPICLYFATFFYFSTYHVFSNMAIRKVVTSFQEGWARWFFLAALILAMSYFTAFAETLTISSFPYYDFEDRNMAYTVGSAFYGIYFIVSFPMFYRIYE-------KKEAGQGFTLG--QVIIDSLGAGMLILILLDIVRLYLGIPLTI 282          
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: A0A7S3XQ29_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ29_HETAK)

HSP 1 Score: 295 bits (754), Expect = 5.330e-92
Identity = 156/262 (59.54%), Postives = 180/262 (68.70%), Query Frame = 3
Query:  174 PWLGDADVAQVMAAILACLGTTL--GGLLLTLTPKKIPNDGSHRSTWLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPIFAFPLLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEE 953
            PW       ++M AI   L T L   G  LT  PK        +S WL   E N AKR +E+F L Y  FWVGCFA I+ F LYE+FDE AYF VC GLCVP+F +P L    +E + P+ +R+  KA++W+AVYSFIGNYWYTHYFYSVL A YTFPSWRLNDVPI L  AT FYFS YHV SNMA+RKV+T++   AART  L  L+  +SYATAF ETLTISGFPYY FEDR MAY VGS FYGIYF+VSFPMF    E
Sbjct:   25 PWF----TVKIMVAIFTGLITLLLLQGATLTRAPKS-------KSCWLPQKE-NSAKRSYEIFTLKYTPFWVGCFAVIVGFQLYESFDEAAYFAVCSGLCVPLFLYPFL----AETETPLARRYAAKASLWLAVYSFIGNYWYTHYFYSVLRASYTFPSWRLNDVPIPLYFATFFYFSTYHVFSNMALRKVLTTYAPGAARTAFLCSLVFALSYATAFAETLTISGFPYYAFEDRNMAYTVGSVFYGIYFLVSFPMFQRLNE 270          
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: A0A8J5XCH9_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCH9_DIALT)

HSP 1 Score: 282 bits (721), Expect = 8.110e-87
Identity = 148/307 (48.21%), Postives = 193/307 (62.87%), Query Frame = 3
Query:  192 DVAQVMAAILACLGTTLGGLLLTLTPKKIPNDGSHRSTWLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPIFAFPLLS-VHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEEWPDQTRKQYDATRGSIEGLWSAALNAMGAGMLILCLLDFVRLAVGADIVMKG 1109
            D+   M  I       LG L   L P  +P +      WL   + N +K  +EV+ L Y+IFW+GCFAAI+AF +YE  DE  Y +VC GL  P+   P L+ + P EA  P+ QR+  KAN WI ++S IGNYWYTHYFY+VL A+YT P+WRLNDVP+AL  AT FYF+ YH  SN+ +RK+ T++  ++AR       +   +Y TAFMET TIS +P Y FEDR+MAY VGSAFYGIYFIVSFP+FY      D+T  ++         L+ A + A+G+GML+L LLD VRL +G    MKG
Sbjct:    2 DIVLTMVLIFLAQLALLGLLSFALAPYSVPGN------WLPEPKGNESKYLYEVWALKYSIFWIGCFAAIVAFQMYERLDENGYMLVCGGLAAPLLLQPFLAPLGPREAAQPLAQRYSFKANAWIFIFSHIGNYWYTHYFYTVLKARYTMPAWRLNDVPLALTFATHFYFTTYHTFSNLMLRKIETTWRPSSARAVFTAASVVAFAYFTAFMETFTISAYPDYSFEDRFMAYTVGSAFYGIYFIVSFPVFYLL----DETAAKHT--------LFQACMEALGSGMLVLMLLDLVRLLLGIPFAMKG 290          
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: A0A7S0DTR5_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DTR5_9EUKA)

HSP 1 Score: 276 bits (706), Expect = 2.770e-84
Identity = 147/303 (48.51%), Postives = 199/303 (65.68%), Query Frame = 3
Query:  201 QVMAAILACLGTTLGGLLLTLTPKKIPNDGSHRSTWLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPIFAFP-LLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEEWPDQTRKQYDATRGSIEGLWSAALNAMGAGMLILCLLDFVRLAVGADIVMK 1106
            QV+ A+++  G  + G+L T       +D   R  WL   + N  KR WEVF+L Y +FW+ CFA II   LYE+FD   Y +VC GL  P+   P LL     E+D+P+ +R+ +KAN+WI ++ FIGNYWYTHYFY+VL A Y+ PSW LN VPI +  AT FYF  YHVLSN+A+RK  ++F   A R   ++ L+ +MSYATAFME+LTISGFP Y F+DR +AY +GSAFYGIYFIVSFPMF   +E P    K++D        L++ A+ A+ +GM +L LLD VR+ +G D+ ++
Sbjct:   22 QVIGAMVS--GLVVVGMLCT-------SDVKGRRNWLPDCKLNSCKRNWEVFSLTYGVFWITCFAIIIGGELYESFDREHYMIVCGGLATPLLLQPILLPSITGESDVPLFERYSLKANLWIFIFGFIGNYWYTHYFYNVLEAHYSMPSWDLNGVPIPMYLATHFYFCFYHVLSNLALRKAYSTFSPGAMRRLFVISLVLIMSYATAFMESLTISGFPCYGFKDRDLAYTLGSAFYGIYFIVSFPMFLRLDESPP---KKWD--------LFTVAVEALASGMAVLMLLDIVRVYMGIDLNIR 304          
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: A0A7S2P5L6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P5L6_9STRA)

HSP 1 Score: 273 bits (698), Expect = 4.530e-83
Identity = 147/305 (48.20%), Postives = 188/305 (61.64%), Query Frame = 3
Query:  207 MAAILACLGTTLGGLLLTLTPKKIPNDGSHRSTWLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPI----FAFPLLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEEWPDQTRKQYDATRGSIEGLWSAALNAMGAGMLILCLLDFVRLAVGADIVMKG 1109
            M AILA +   L G++    P     +    S +L CA   P KR +EV+ L Y   W+G FA ++AF +YE  D   Y  +C GL +P     F  P   ++  +A     +R+ +KAN+WIAVYSFIGNYWYTHYFYSVL A+Y+ P+ RLN+VPIAL  AT FYFS YH  SN+ +R V  SFE    R      ++   SY TAFMETLTIS +PYY FED++MAY  GSAFYGIYF+VSFP F+ FE        Q D   G    LW   +++ GAGM+ILCLLDFVRL +G ++V+ G
Sbjct:   30 MTAILATMLAILIGIVQLQKPS-CKEEKPPSSRFLPCAVTEPTKRAYEVYTLIYTTIWIGIFACVVAFQIYERLDAWGYLYLCGGLSLPFLLQPFVLPSCGMNSPDAHRKWYERYSMKANLWIAVYSFIGNYWYTHYFYSVLKARYSMPAHRLNNVPIALYFATHFYFSTYHAFSNILLRWVTRSFENGFMRNVLFWSVVVSFSYFTAFMETLTISSYPYYSFEDKHMAYTTGSAFYGIYFLVSFPTFFYFET-------QVDDKEGKHTTLWETFVSSCGAGMMILCLLDFVRLYIGVNLVVGG 326          
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: A0A6U4EXF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EXF3_9STRA)

HSP 1 Score: 272 bits (695), Expect = 6.890e-83
Identity = 153/306 (50.00%), Postives = 190/306 (62.09%), Query Frame = 3
Query:  192 DVAQVMAAILACLGTTLGGLLLTLTPKKIPNDGSHRSTWLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPIFAFPLLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEEWPDQTRKQYDATRGSIEGLWSAALNAMGAGMLILCLLDFVRLAVGADIVMKG 1109
            DV   M  I   +   L      LT +K     +  STWLA A++ P K+ +E F   Y++ W+G F  IIA  LYE F EV Y  V  GL +P+F  P+L+   +E  LP  +R+G KAN WI +YSFIGNYWYTHYF+SVL A YTFPSWRLN VP  L  AT FYFS YHVLSN  +RKV T++ A  AR     +++  +SYATAFMET TI+GFPYY FE+R MAY VGSAFYGIYFI SFPMF+  +E      + Y    G    L+   ++A G GMLIL  LD VRLA+   + + G
Sbjct:   11 DVPPEMGTIFLGMLAGLAAAAQLLTRRK----DAAASTWLAGADQ-PGKQAYEHFAAWYSVVWMGAFGVIIAAQLYEQFTEVEYLGVLGGLALPLFLQPVLAPAQAERSLPFWKRYGFKANAWIWIYSFIGNYWYTHYFFSVLKANYTFPSWRLNYVPFCLYLATHFYFSSYHVLSNALLRKVATTYAAGPARWVFSALMVLCLSYATAFMETFTIAGFPYYTFENRSMAYTVGSAFYGIYFIYSFPMFFLLDE------RSY----GPARTLYETVVDACGCGMLILTTLDLVRLALSIPLTIPG 301          
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Match: A0A482SHV5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHV5_9ARCH)

HSP 1 Score: 270 bits (689), Expect = 6.260e-82
Identity = 144/293 (49.15%), Postives = 182/293 (62.12%), Query Frame = 3
Query:  246 GLLLTLTPKKIPNDGSHRST-WLACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCFGLCVPIFAFPLLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYGIYFIVSFPMFYAFEE----WPDQTRKQYDATRGSIEGLWSAALNAMGAGMLILCLLDFVRLAVGADIVMKG 1109
            G++  L   +    G H S+ +L  A  N  K  +E + L Y   W+G F  +I F +YE+FDE +Y ++C GL  P    P L   PSE +LP+ QR+  KANVWI +YSFIGNYWYTHYFY+VL A YTFPS RLNDVPIA+  +T FYF  YH  SN+ +RK+ T+F  N  R    V  + V SY TAFMETLTIS FPYY FEDRY AY VGSAFY +YFIVSFPMFY  +E      D+ + +Y+         +   + +  AGM+ILCLLDF RL  G  + + G
Sbjct:   19 GVIAVLVMLQTKKPGKHSSSSFLPNATTNLNKYEFEKWALTYTGIWIGVFTVVIIFQMYESFDENSYMILCGGLASPFLLQPFLFPLPSERNLPLFQRYSFKANVWIVIYSFIGNYWYTHYFYNVLKASYTFPSHRLNDVPIAMYFSTHFYFVTYHTFSNVILRKIETTFVPNMMRLVLFVGAVLVFSYFTAFMETLTISSFPYYSFEDRYHAYTVGSAFYALYFIVSFPMFYFLDENNNLVKDKPQPRYN--------FYQTVIESFAAGMMILCLLDFGRLVAGIPLKISG 303          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1117.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMG2_ECTSI2.490e-16174.14Cycloeucalenol cycloisomerase n=2 Tax=Ectocarpus T... [more]
A0A836CJT1_9STRA3.290e-10154.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0Y312_AURAN6.290e-9352.54Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2V4D0_9STRA1.490e-9253.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XQ29_HETAK5.330e-9259.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J5XCH9_DIALT8.110e-8748.21Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S0DTR5_9EUKA2.770e-8448.51Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S2P5L6_9STRA4.530e-8348.20Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6U4EXF3_9STRA6.890e-8350.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A482SHV5_9ARCH6.260e-8249.15Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1117contigA-nodosum_M_contig1117:143188..147797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMG2
Preferred nameCPI1
Model size1891
Max annot lvl2759|Eukaryota
KEGG rclassRC00994
KEGG koko:K08246
KEGG ReactionR03775
KEGG Pathwayko00100,ko01100,ko01110,map00100,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0016020
Exons8
Evalue4.37e-166
EggNOG OGs28HCW@1|root,2QPR8@2759|Eukaryota
Ec32 ortholog descriptionCycloeucalenol cycloisomerase
Ec32 orthologEc-05_000840.1
EC5.5.1.9
Cds size954
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1117.7.1prot_A-nodosum_M_contig1117.7.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1117 143967..147136 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866516.3520927-UTR-A-nodosum_M_contig1117:143187..1439661680866516.3520927-UTR-A-nodosum_M_contig1117:143187..143966Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1117 143188..143966 -
1680866516.6140203-UTR-A-nodosum_M_contig1117:147136..1471961680866516.6140203-UTR-A-nodosum_M_contig1117:147136..147196Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1117 147137..147196 -
1680866516.6229284-UTR-A-nodosum_M_contig1117:147699..1477971680866516.6229284-UTR-A-nodosum_M_contig1117:147699..147797Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1117 147700..147797 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866516.47874-CDS-A-nodosum_M_contig1117:143966..1441531680866516.47874-CDS-A-nodosum_M_contig1117:143966..144153Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1117 143967..144153 -
1680866516.4881797-CDS-A-nodosum_M_contig1117:144327..1445151680866516.4881797-CDS-A-nodosum_M_contig1117:144327..144515Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1117 144328..144515 -
1680866516.4984624-CDS-A-nodosum_M_contig1117:144749..1448941680866516.4984624-CDS-A-nodosum_M_contig1117:144749..144894Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1117 144750..144894 -
1680866516.5092914-CDS-A-nodosum_M_contig1117:145190..1453481680866516.5092914-CDS-A-nodosum_M_contig1117:145190..145348Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1117 145191..145348 -
1680866516.5195909-CDS-A-nodosum_M_contig1117:145685..1458121680866516.5195909-CDS-A-nodosum_M_contig1117:145685..145812Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1117 145686..145812 -
1680866516.5964828-CDS-A-nodosum_M_contig1117:146240..1463441680866516.5964828-CDS-A-nodosum_M_contig1117:146240..146344Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1117 146241..146344 -
1680866516.6053324-CDS-A-nodosum_M_contig1117:147091..1471361680866516.6053324-CDS-A-nodosum_M_contig1117:147091..147136Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1117 147092..147136 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1117.7.1

>prot_A-nodosum_M_contig1117.7.1 ID=prot_A-nodosum_M_contig1117.7.1|Name=mRNA_A-nodosum_M_contig1117.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=318bp
MGSASPWLGDADVAQVMAAILACLGTTLGGLLLTLTPKKIPNDGSHRSTW
LACAEKNPAKRRWEVFNLAYAIFWVGCFAAIIAFSLYEAFDEVAYFVVCF
GLCVPIFAFPLLSVHPSEADLPVGQRFGVKANVWIAVYSFIGNYWYTHYF
YSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEA
NAARTFTLVVLIGVMSYATAFMETLTISGFPYYQFEDRYMAYVVGSAFYG
IYFIVSFPMFYAFEEWPDQTRKQYDATRGSIEGLWSAALNAMGAGMLILC
LLDFVRLAVGADIVMKG*
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mRNA from alignment at A-nodosum_M_contig1117:143188..147797-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1117.7.1 ID=mRNA_A-nodosum_M_contig1117.7.1|Name=mRNA_A-nodosum_M_contig1117.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4610bp|location=Sequence derived from alignment at A-nodosum_M_contig1117:143188..147797- (Ascophyllum nodosum dioecious)
GGCAATTCATCGTAGGCGTATAAATCTGACTGATAAGTGAGGTGCTGCGA TCGACAACATCTTTGGTGACGGCCAAACTATTCTGTGGCGTGAGTTCCGC CCAATAGTTGCATTCGTTGTTGTGTATAGATATATAATAATGTCCCCGCG GACAGTCTGGCTTCTGTTCAGCCAGTGTGTAAGTTCGAAAGCGATCCTGT GCGCAAAGCGTTGCTCCTGTAGTCTAAGCAAATGCTCCAGCTTTTTTATA TGTACCGTTGCTTTGAACTCTGCTGCCTCTACAGTTGCGTTGAACTTTGA TGCTTATACGTTCTGGGCATACTTGTCTTGCATCATACTGTACTACGCTG ACACGTGAGACGTGCAGATTGGCTCCAGGTTGCCCGTGTTTCTCAGTTTT TCTGCTTTCAGATTTGTCTGAGTACACGATTCATGCAACGGTTATTGTAT CCAAATGCTGGGGTCGGTATTTATTTTCACGACATGGTACGCGCGACATC CTCGAGATGGGCCAATTTCGTAACGGAGCTGGTGGACCTTGACCAACGTC TTTCGTATCCACCATCTTGGACCCTGTCGGCTTTGCTCGTATGACTGCAA GCTTCAGACGCTCCGCTTACTGCTGCATTGGATTACCTTGGGTACACTGC TCGGTGGGGGAATGGGTTCAGCTTCGCCTTGGTTAGGAGACGCCGATGTC GCCCAGGTAATCCCGCGGCCTTGCATTGTTCGAGTGCACCCAAGTAGAGA CGATAGGCGACCGTCGAAACAAACGCTTCCTACGCCTGCAGAGCTTCTTC CTGCATCCCGGAGAGCATGGAATCCGTTTTACTTTTTTTACTTCACAAGG CCCATTTCCTTGTTGATTGGTCGATTGGGCCCAGCAGACTTCACGTTCAG GTTATATGTAAACCACAAGACCGCAGTAGCATGTAAAGAAGAATCTAAAC GCATCTAAAACCTTCTGGGCATGCACCCAATCATGATCAGGGGGTAAAAT TGTCAAAACGTGTAGAACAACGCGAGCGGCTCAGTGGTTGAGCGATACTA ATTCGTAAAGGAATGTTTCTTTTAACTGTAAAGTACTTTGTTCGTAGGTT GGGTTAGGGTTACCATGGGGTCGACTATTGGACCCTATTAATTTTAATAG GAAGATGTTCCAAGTGATGAAAAATGCCCTCTTCGTGAGCGACGCGGAGA ACTTCAATTTTCCACGCAAATGTTCTATAGCAGAAACTTCAAATGTCACC CGCCCCATACTAGGGGTTGAGCTCTCAAAATTTTGTGATTGGAGCAGTCG GCGAGCAAAAAAAAAAGCAACGATGACCCCACGCAGTTTGTACTCTCTTG AGTTCGACATTTTTTCCCGTCTCACTCCGGGGCTGGTGGTTCCGAAGTGT TACATCCCCTTTTTTCCTCGTTCCCCTTGCCGCGTCACGAACTCGTCTGA AAGGTTATGGCTGCCATTCTGGCATGCCTGGGAACCACCTTGGGCGGACT CTTGCTGACTCTAACGCCGAAGAAAATACCCAACGACGGGTCCCACCGCT CAACATGGTACGCCCCTACGCCTGATGACTGTAGGCGATCGGGTATTTGT AAGAGTCCGGGGAATGTGTAGCGCGCTCGGCGTGATTTTTTCGCGGCATT CATGCCAAGTATGACGCGTCTAAGTCTCCGGCTCCGTTGACTCGTAACAC GGCCAGAATTTTGGCAAAAATGGCCGTAAACTGCGCTCGGGTACATGAAA TACCGGTGTAGCTGTGCTAACTCGTCACTACCGTGAACCGATAGCTGCGA AGCGGGAAGTCGCCACAGTTGAAGGTAAAAGCTCGAGGAGAACGAGTCCG CCCCAGCAAGGACAAACTTCGATCGTGTCCACACGACTTGGCGAGTTTTG TGGTTCGAAACTGGAGGCAAGAAGTCGTACTCTGCCGTGTATTTGGTGAT GTGTGAGAAACGTATTTGTACCGACTTTTTATTAGGTTGGCTTGCGCGGA GAAGAACCCTGCAAAGCGACGGTGGGAGGTTTTCAACCTCGCTTACGCTA TTTTCTGGGTGGGGTGCTTCGCCGCCATCATCGCCTTCAGCCTTTACGAG GCTTTTGACGAGGTATTGACTTTCTCCGTTCACTACTGAGCACCCCAAGT GTACAAGAGTTCCATGTCTTCACATTTTCTGTTTGTTTTTTTGTTTCCCT CTCGTGTATCGTTAGCTCTAGAAGAACTGCGATTTGTCTGTCTTCTTGAT CCGGTATTTTGTCCAAAGCAAAACTTGCCTGAGGTAGACACCGCGTCCGA ATCACGAACATCCAAAGCACCTGGAAACAACAGGCGACATGCGGAAGAGG CAGGGGTACTGTAGTAATTCGTTAGAGGAGCATCAGCGCATTTGATTCCA CAGTAATCAAACCTGACGGTGTTTTGCCGCGTGCTATCTGGCCGGGCAGG TAGCGTACTTCGTGGTGTGTTTCGGACTTTGCGTGCCGATCTTCGCGTTC CCTCTGCTGAGTGTGCATCCCTCCGAAGCAGACCTGCCCGTGGGCCAGCG GTTCGGCGTGAAGGCAAATGTCTGGATTGCCGTCTACAGCTTCATCGGCA ACTATTGGTAAGCCTCCTCCTCGCGTCGCTGCTTGTCTGGTTGAAGCTCA TCAGCAGGAAAAGGCCTTCCCAAAACTACTTAGCTCGAAACCAGAAATTC CCACGATCCTGCGTAAATGGTATAGTCTATATCGAAGAGCCGCGTTGTCA AACGCTCTTCTCTGCCATTTGACAGCTCAGGCAATCCTCGCAAAACGTTG GGATTATCGCTATCGATCGTGAAGCTCGTCTATCGTGTGCTATTGGTCCT AAGCCACCCTGCGCTGCTTTGCCGTGTGTTCTGTGGGTCCCCGGGCGTGG CAGGTATACCCACTACTTTTACTCCGTCCTGGGCGCTAAATATACGTTCC CCAGCTGGCGCCTCAACGACGTGCCGATCGCGCTCATCGGAGCCACCATT TTCTACTTCTCTTTGTATCATGTCCTGAGCAACATGGCCATCCGTAAGGT GAAAAGCGAAATTTGAGTTCATGGAAGGTGTTCGCAAACGCTTGCAAAGG GAGTCAAATCGTCTTGCGAACACGCCAGAGCTCCTACTTTTTGGGCTGCT AGCCGTTGTCCAGCCCGTAGATGCAGCTCGCTACTATATATGATAACGTG AAATGCTTCCTTTTGCTGAGGCCTCCGCGCTCTCCGAGACAAGTCGGTCA TATGATCGCTCTCATTTTCGCTTTCACTACAGGTAGTCACTTCCTTCGAG GCGAACGCGGCACGGACCTTCACCCTTGTGGTCCTGATCGGGGTTATGTC GTACGCGACGGCGTTCATGGAAACCCTCACTATTTCGGGGTTCCCCTACT ATCAGTTTGAGGACAGATATATGGCCTACGTGGTCGGATCTGCTTTCTAC GGTATCTACTTTATTGTCAGGTGACGCTCACCCGTCTAGTGTGTATGCAT GTGTGTGTGTGTGCACTCGCGCGTGTATACGAATCGTGTTGTATCTGCGG TCCACGTGTTGGTAGCTTTTGAGCAAGTCGTTACCGCGGACAAGGTTCAA CCCCCCCCCTTCTCACCGATCGTCTTTTATCTACCTCCGTTCAGCTTCCC AATGTTCTACGCTTTTGAGGAGTGGCCCGATCAAACTCGCAAGCAGTACG ACGCCACGCGAGGCTCCATCGAGGGGCTGTGGAGCGCAGCCTTGAACGCC ATGGGGGCGGGTATGCTCATTCTTTGCCTGCTGGACTTCGTCCGTCTCGC CGTAGGGGCGGATATTGTAATGAAGGGCTAGGACGGTCGCTCGATTGAGG GACGCCGATATTTATGATTTTCGCGCTTTTCACCTACAGTTTTTTGTTTT TGCGGCCTTGAACGCCATGAGGGCGGATATGCTCATTCTTTACCGGACTT CGTCCTTCTCGCTTTAGGGGTGGATTTTGTTATGAAAGGCTAGGATGGTC GCTCTATTGAGCGACCCCGAGATCTATGGTTTCCGCGCTTTTCCCCTACA GTTTCTTGTTTTTCTGCCCTGTTGCACCCCTCCCTTGCCCCCGTAAGACT TTGAGGTGAGCATTTGCCAACTAAATACAAAATAGTACGCGCCCTTCTTT CTACGGAGGATGACTTGATATCCTGTTTTTGAGCGCCCTTGATTGCAGCC GTTTTGCAAATCGAGCTCTACCCTTCTGAAGTCTATCCGTAACAGGTTCC GGTACTCGCAGGTTTAGCGATGGGAGAGTTTGAAGCAGGGACTACCTTAG CATTGAGTCGGACTTAGAAGTGCCACATATTTAGGGCCTGGAAAATCATA GAGTTAATGTAATAGGGTTGTTTTGAGTCAAACGGCTTGTGTATTCGGTA GTCGTGAGTTCGTTTTTGGCCAACAAAAGCTTCCGCAATCGAGCTAAATC GTCAGAAAGTATCTAAAGAAGTGCTTCAGTCGCTTCTTGCGTTAAGCAAT GCCGCACGCGGCCCTATCCTCAAGACGGCAGCAGATGCACGATTTCGTCA GGGCCCTATTCCCTCAGGCCAGAGCGGATGTATAGCAACAAGCGTACCTG ATTCTCGATT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1117:143188..147797-

>mRNA_A-nodosum_M_contig1117.7.1 ID=mRNA_A-nodosum_M_contig1117.7.1|Name=mRNA_A-nodosum_M_contig1117.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=954bp|location=Sequence derived from alignment at A-nodosum_M_contig1117:143188..147797- (Ascophyllum nodosum dioecious)
ATGGGTTCAGCTTCGCCTTGGTTAGGAGACGCCGATGTCGCCCAGGTTAT
GGCTGCCATTCTGGCATGCCTGGGAACCACCTTGGGCGGACTCTTGCTGA
CTCTAACGCCGAAGAAAATACCCAACGACGGGTCCCACCGCTCAACATGG
TTGGCTTGCGCGGAGAAGAACCCTGCAAAGCGACGGTGGGAGGTTTTCAA
CCTCGCTTACGCTATTTTCTGGGTGGGGTGCTTCGCCGCCATCATCGCCT
TCAGCCTTTACGAGGCTTTTGACGAGGTAGCGTACTTCGTGGTGTGTTTC
GGACTTTGCGTGCCGATCTTCGCGTTCCCTCTGCTGAGTGTGCATCCCTC
CGAAGCAGACCTGCCCGTGGGCCAGCGGTTCGGCGTGAAGGCAAATGTCT
GGATTGCCGTCTACAGCTTCATCGGCAACTATTGGTATACCCACTACTTT
TACTCCGTCCTGGGCGCTAAATATACGTTCCCCAGCTGGCGCCTCAACGA
CGTGCCGATCGCGCTCATCGGAGCCACCATTTTCTACTTCTCTTTGTATC
ATGTCCTGAGCAACATGGCCATCCGTAAGGTAGTCACTTCCTTCGAGGCG
AACGCGGCACGGACCTTCACCCTTGTGGTCCTGATCGGGGTTATGTCGTA
CGCGACGGCGTTCATGGAAACCCTCACTATTTCGGGGTTCCCCTACTATC
AGTTTGAGGACAGATATATGGCCTACGTGGTCGGATCTGCTTTCTACGGT
ATCTACTTTATTGTCAGCTTCCCAATGTTCTACGCTTTTGAGGAGTGGCC
CGATCAAACTCGCAAGCAGTACGACGCCACGCGAGGCTCCATCGAGGGGC
TGTGGAGCGCAGCCTTGAACGCCATGGGGGCGGGTATGCTCATTCTTTGC
CTGCTGGACTTCGTCCGTCTCGCCGTAGGGGCGGATATTGTAATGAAGGG
CTAG
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