mRNA_A-nodosum_M_contig1116.20.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1116.20.1
Unique NamemRNA_A-nodosum_M_contig1116.20.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: D8LHI8_ECTSI (Protein binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI8_ECTSI)

HSP 1 Score: 639 bits (1649), Expect = 2.100e-224
Identity = 339/497 (68.21%), Postives = 384/497 (77.26%), Query Frame = 1 
Query:    1 MGFAGEDFPRAYFTSLIGRTVDVEATRKLKAEKTAAAXXXXXXXXPPRVGGGKGKSPATLKWRERWPQSHGTAAXXXXXXXXXXXXXLVGGRADXXXXXXXXXXXXXXXXXXXEDGDVVFRWHVDSLLSGGENMEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHLLQQARGGVPIPPLSAAKAKSLGNNLRPSLAERLRMDVARDMMVLAARASDAAFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELLVNTSPLTNALQA---SGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSPSSSWRVKVLAAGVNERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP 1482
            MGFAGEDFPRAYFTSLIGRTVD+EATR+L+AE  AA           R GG      A        PQ  G  A               GG A+                    DG  V+RWHVDSL+ GG +M+VVPLME+GFVT+WDL+E+VWEHAE++RLK KLSDHPVL+SEK FN+S+ R+KYTEIMFEKFGVPAEF+SKDAVLACFSIGRTTA+L DVGGD++VVTPV DGWVESKGIVKS+LGS+ALQRYYLHLL++ARGG PIPPL     K++G+ LRPSLAERLRMDVARDM+ LA R SD+AFE +APQFSSIPSVPFRLPDGTEVGIG DRF+VPELLVNTSPLT AL     SG+   P +R LA+SL RPGF +RPLQA++V++V+ACEREQQ  L N VVLAGGGCCFEGL ERVKAEIE  LD+PS+ WRVKVLAAG NERKVSTWLGGSIL SLGSFHEMWLSK+EYEEHGA MIDKKCP
Sbjct:    1 MGFAGEDFPRAYFTSLIGRTVDLEATRRLEAEMDAAVDSAGSPARA-RAGGNXXXKAAPSPPANGQPQRGGKGAAASPAVPGGSGES-EGGAANGEEKDEG-------------DGRTVYRWHVDSLMGGGADMDVVPLMEDGFVTDWDLMEKVWEHAERTRLKTKLSDHPVLISEKPFNSSKERMKYTEIMFEKFGVPAEFMSKDAVLACFSIGRTTASLVDVGGDSAVVTPVYDGWVESKGIVKSVLGSSALQRYYLHLLEEARGGDPIPPLPTTMMKAVGS-LRPSLAERLRMDVARDMLALAGRTSDSAFEADAPQFSSIPSVPFRLPDGTEVGIGMDRFRVPELLVNTSPLTEALSGGVGSGQDPSPGMRLLAESLSRPGFGMRPLQATVVESVLACEREQQAQLFNSVVLAGGGCCFEGLAERVKAEIEQSLDAPSTGWRVKVLAAGNNERKVSTWLGGSILASLGSFHEMWLSKSEYEEHGAHMIDKKCP 481
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: A0A6H5KHN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN4_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 3.530e-100
Identity = 199/441 (45.12%), Postives = 247/441 (56.01%), Query Frame = 1 
Query:    1 MGFAGEDFPRAYFTSLIGRTVDVEATRKLKAEKTAAAXXXXXXXXPPRVGGGKGKSPATLKWRERWPQSHGTAAXXXXXXXXXXXXXLVGGRADXXXXXXXXXXXXXXXXXXXEDGDVVFRWHVDSLLSGGENMEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHLLQQARGGVPIPPLSAAKAKSLGNNLRPSLAERLRMDVARDMMVLAARASD--AAFEENAPQFSSIPSVP------FRLPDGTEVGIGT-------DRFKVPELLVNTSPLTNALQASGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPER 1278
            MGFAGEDFPRAY TSLIGRTVD+EATR+L+AE  AA         P + GG +G + A   W    P    T +               G + +                    DG          L+ GG +M+V+PLME+GFVT+WDL+E+VWEHAE++RLK KLSDH VL+SEK FN+S+ R+ YTE+MFE+FGVPAEF+SKD VL CFSIGRTTA+L DVGGD++V TPV DGWVESKGIVKS+LG NALQRY+L+LL++ARGG PIPPL     K++ +   P           R   +  A  +D  +AFE + P     P  P       R   G   G GT       D   V      + P        G   P  LR    S            A++V++V+ACEREQQ  L + VVLAGGGCCF GL ER
Sbjct:   55 MGFAGEDFPRAYLTSLIGRTVDLEATRRLEAEMGAAVDSARS---PAKAGGERGGATARRMWH---PXXXPTGSPSGEARGPQFRRPCRGAQGNQKGAPRTERRRTGGTGGRFIDG-------TGYLMGGGADMDVLPLMEDGFVTDWDLIEKVWEHAERTRLKTKLSDHQVLISEKPFNSSKERMMYTEMMFEEFGVPAEFVSKDGVLPCFSIGRTTASLVDVGGDSAVATPVFDGWVESKGIVKSVLGRNALQRYHLNLLEEARGGDPIPPLPTTMMKTIADRTPPH---------GRSEGLAGADGADLGSAFEADTPSSPPYPPCPSGCRTSLRYRHGQVQGAGTAGEHVAADGGSVSRKREQSGPFPRDEDTGGVHRPTGLRNAPASEP----------ATVVESVLACEREQQAQLFSSVVLAGGGCCFAGLAER 463
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: A0A835Z589_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z589_9STRA)

HSP 1 Score: 312 bits (799), Expect = 3.280e-97
Identity = 168/383 (43.86%), Postives = 247/383 (64.49%), Query Frame = 1 
Query:  352 VVFRWHVDSLLSGGENMEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHLLQQARGGVPIPPLSAAKAKSLGNNL------RPSLAERLRMDVARDMMVLAARASDAAFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELLVNTSPLTNALQASGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSPSSSWRVKVLAAGVNERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP 1482
            +V+++HVD+     +      + + G V +WD++E++WEHA  ++        P +++          L   E+MFEKF VPA F+ +DAVL+CFS+G+TT T  DVGG T+V TPV DGWV+ + IV + LG+ AL RY   L++    G  + P  A +      +        PS  E ++++VARD++  + R S+ A ++ APQF+S+P VP+RLPDG+EV +G +RFKVPELL NT P T A  A+G      L A A+SL      L PLQ  +++ +  C+ + Q SL + +V++GGG  F+G+PER+++E++  + + +  WR KVLAAG NER++S WLGGSILGSLGSFHEMW+SK+EYEEHGA++I+KKCP
Sbjct:   42 MVYQYHVDAQWERTDMELRSAVGKAGAVQDWDMVEKIWEHAAVNKSPAA----PAIITAVLCTHPCPNLVVQELMFEKFDVPALFMGRDAVLSCFSLGKTTGTAVDVGGHTTV-TPVTDGWVDHRAIVTASLGATALHRYCTLLMEAT--GTTLKPTQAFRTGCKPRHFTPEHTWHPSYREFVQLEVARDIIETSGRVSETAVDDQAPQFTSVPGVPYRLPDGSEVTVGVERFKVPELLFNTDPFTTA--AAGTP----LAAFAESLTETDTRLVPLQNLVLECIQRCDGDAQQSLASTIVVSGGGSGFDGMPERLRSEVDLLIAAGAPMWRPKVLAAGANERRISAWLGGSILGSLGSFHEMWMSKSEYEEHGARLINKKCP 411
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: W7TUS4_9STRA (Actin related protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUS4_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.470e-83
Identity = 152/374 (40.64%), Postives = 219/374 (58.56%), Query Frame = 1 
Query:  400 MEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHLLQQARGGVPIPP-LSAAKAKSLGNNLRPSLAERLRMDVARDMMVLAARASDAAFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELLVNTSPL----------TNALQASGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSP--SSSWRVKVLAAGVNERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP 1482
            M V   +  G V +WD++E++W+HA ++ L V L+  P+LL E++FNTS+ R +Y E+MFEKF  PA F++KD+VL+CF+ G+T+  + D+G +T+ V PV DGW+E+KG+++S LG   + RY    L+    GV I P L        G  +  S  +   ++V R +     R  +A+     P+ SS+P   + LPDGT V  G +RF+  ++L+N  P            +++Q  GE                G+    L      AV  CE+EQQ  L++ VVLAGGG C EG  ER+K E+E  +  P  + S RVKVL AG  ERK+  WLGGSI+GSLG+FHEMW+SKAEY E GA+++D KCP
Sbjct:   82 MNVHTPLSGGLVEDWDMVEQIWQHANKTALTVDLAQTPLLLIERAFNTSKLRQEYAELMFEKFQSPALFLAKDSVLSCFACGKTSGLVVDIGAETTTVGPVQDGWLEAKGLMRSHLGGRMVDRYLRAFLES--DGVTIDPFLGQPPVAGTGEGMSASYRDFATLEVVRGLKESVCRMPEASVTPKDPKDSSVPKANYELPDGTVVSAGWERFQAADILMNPEPAWELMPEGREEEDSMQVDGEE--------GGKEGEGGWSRESLPRMAATAVRRCEKEQQSPLLSSVVLAGGGACLEGTMERLKVELENAMYGPGQAGSTRVKVLQAGPQERKICAWLGGSIVGSLGTFHEMWVSKAEYGERGARVVDTKCP 445
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: A0A812X7D1_SYMMI (ARP4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X7D1_SYMMI)

HSP 1 Score: 270 bits (690), Expect = 9.920e-81
Identity = 149/384 (38.80%), Postives = 231/384 (60.16%), Query Frame = 1 
Query:  394 ENMEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHL----LQQARGGVPIPPL----------SAAKAKSLG-NNLRPSLAERLRMDVARDMMVLAARASDA--AFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELLVNTSPLTNALQASGESCPPALRALAKSLDRPG---FVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSPSSSWRVKVLAAG-VNERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP 1482
            ENM +   M +G V++WD L+++WEH+  S LKV L + PVL +EK +N+S SR K  E+MFE + VPA FI KD+ L+C+S G+T+  + D GG  +VVTPV DGW E+  I +  +G   +  Y L      +QQ  G  P  PL           +  A+S G   + P+    + +++ RD+     R  D+  A  E  P++ ++P +P+ LPDGT + IG +RF+ PELL++ +    AL  S E     L  L  S   PG   F   P+Q  I+  V+ CE + Q ++++ +++ GG   FEG PER++ E+E  + + + +W+++++AA   +ER +STW+GGSILGSLGS HEMW+ ++EY+E+G+ ++DKKCP
Sbjct:   60 ENMRIQHAMRDGLVSDWDALQQLWEHSVASYLKVDLKETPVLFAEKVYNSSTSRQKLCEMMFETYDVPALFIGKDSALSCYSCGKTSGVVVDCGGSGTVVTPVNDGWSETSAISRGPVGGRHMDAYMLQFVNTQMQQLYGLPPPKPLFRLTKTVTEDGSVTAQSNGLRRVHPTYDAYMALELGRDIKESVCRMVDSSSALLEGDPRYVNMPLIPYVLPDGTVLDIGPERFQAPELLLDPA---RALLDSAE-----LETLGLSASSPGGVPFTTDPVQKLILDTVLRCEADAQAAMVSNLIICGGNAGFEGTPERIRNEVERIVHANAPTWKIRMVAASSASERTLSTWIGGSILGSLGSLHEMWMGRSEYDEYGSALVDKKCP 435
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: A0A1Y1ILU8_KLENI (Actin-related protein 4-ARP4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ILU8_KLENI)

HSP 1 Score: 239 bits (611), Expect = 8.600e-69
Identity = 144/375 (38.40%), Postives = 215/375 (57.33%), Query Frame = 1 
Query:  394 ENMEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHLLQQARGGVPIPPLSAAKAKSL-----------GNNLRPSLAERLRMDVARDMMVLAARASDAAFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELLVNTSPLTNALQASGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSPSSSWRVKVLAAGVN-ERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP 1482
            ++MEVVP ME G V +WD+LE +W+HA + RL+V   +HP+LL+E S NT   R K  E+MFEK+G PA F++K+AVL  F+ GR T+ + D GG  + V  V DG V  K +++S LG + L R    LLQ    GV + P  + K + +                 S A   +  +  D+     R +DAAF+E A  ++++P   + LPDG  + +G+DRFKVPELL N + +   + A  E            LD  G  L  + + ++ +V  C+ + +  L N ++LAGG   F    ER++ E++   +    + +VKV A+ +N E++ S W+GGSIL SLG+F +MWLSK+EYEEHGAQ + +KCP
Sbjct:  108 DHMEVVPCMEAGLVADWDVLEALWDHALRERLQVDPREHPMLLAEPSHNTPAVREKTVELMFEKYGAPALFLAKNAVLTSFASGRPTSLVVDSGGSGTTVAAVHDGLVLHKSVLRSPLGGDLLTRALQLLLQHQ--GVQVRPRYSFKRQEVRPGEFEAVAVPAPGTTASYAAFSQQAITADVKEAVCRVADAAFDEAA--YANVPGSSYELPDGNVIEVGSDRFKVPELLFNPAGILPGVPAGAEL----------GLDGAG-PLAGVASLVLDSVNKCDVDIRRELFNTILLAGGSTLFSSFKERLEREVQ---EIAPQTAKVKVTASSINVEKRFSVWIGGSILASLGTFQQMWLSKSEYEEHGAQYVHRKCP 464
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: A0A2K1JED8_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JED8_PHYPA)

HSP 1 Score: 235 bits (599), Expect = 2.450e-67
Identity = 136/373 (36.46%), Postives = 208/373 (55.76%), Query Frame = 1 
Query:  400 MEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHLLQQARGGVPIPPLSAAKAKSLGN-----------NLRPSLAERLRMDVARDMMVLAARASDAAFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELLVNTSPLTNALQASGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSPSSSWRVKVLAAG-VNERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP 1482
            MEVVP M++G V +WD++E +W+HA + RL +   +HP+LL+E SFNT + R K  E+MFEK+ VPA F++K+AVL  F+ GR T+ + D GG ++ V  V DG+V  K IV+S +G   L       L+    G+ I P  + K K +             N   S     +  +  D+     R  D+AF+E +  +++IP+ P+ LPDG  + IG DRFK+ ++L N + +              +  + K     G     L   +++++  C+ + +  L N V+LAGG      + ER++ ++   ++    + RVKVLA+G V ER+ S W+GGSIL SLGSF +MW SKAEYEEHG   + +KCP
Sbjct:   85 MEVVPAMKDGLVADWDVVESLWDHALRDRLMIDPKEHPMLLAEPSFNTQQHREKMVELMFEKYDVPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAAVHDGYVLQKAIVRSAIGGEVLTDCLQRTLEAK--GIKIKPRFSFKRKEIRQGEYELIPLDLPNTTDSYYAYAQRAIVADIKESICRVPDSAFDETS--YANIPTTPYELPDGQIIEIGADRFKISDILFNPTLIQT------------IPGMEKFGTEAGIPFNGLPQMVIESINKCDVDIRRELFNSVMLAGGTASMHQMKERLEKDL---MEEAPQAARVKVLASGNVLERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGPTYVQRKCP 438
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: A0A2R6WRM8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WRM8_MARPO)

HSP 1 Score: 235 bits (600), Expect = 2.460e-67
Identity = 132/375 (35.20%), Postives = 217/375 (57.87%), Query Frame = 1 
Query:  394 ENMEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHLLQQARGGVPIPPLSAAKAKS-------LGN----NLRPSLAERLRMDVARDMMVLAARASDAAFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELLVNTSPLTNALQASGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSPSSSWRVKVLAAG-VNERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP 1482
            ++MEVVP +++G + +W+++E +W+H  + RL +   +HP+LL+E SFNT + R K  E+MFEK+ +PA F++K+AVL  F+ GR T+ + D GG ++ V  V DG+V  K IV+S +G   L    L  L+    G+ I P  + K K        L N    N   S    ++  +A D+     R  D  FEE++  +++IP+ P+ LPDG  + +G DRFK+P+L+ N + +              +  + K     G  ++ L   +++++  C+ + +  L + ++LAGG    + + ER++ ++   ++    + RVKVLA+G   ER+ S W+GGSIL SLGSF +MWLSK+E+EEHGA  + +KCP
Sbjct:   96 DHMEVVPALKDGLINDWEVVESIWDHTLRERLMIDPKEHPMLLAEPSFNTPQHREKIVELMFEKYQIPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAAVHDGYVLQKAIVRSPIGGEFLTDCMLKALEGR--GIAIRPRYSFKRKEVRPGEFELTNVDFPNTTESYRRYIQRAIAADVKESVCRVPDGLFEESS--YANIPTTPYELPDGQTIEVGADRFKIPDLMFNPALVQT------------IPGMEKFTTEAGASVKGLPQMVIESINKCDVDIRRELFSSILLAGGTAAMQQMKERLEKDL---IEEAPQAARVKVLASGNAIERRFSVWIGGSILASLGSFQQMWLSKSEFEEHGASYVHRKCP 451
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: A0A388K3W8_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K3W8_CHABU)

HSP 1 Score: 234 bits (597), Expect = 6.740e-67
Identity = 144/384 (37.50%), Postives = 221/384 (57.55%), Query Frame = 1 
Query:  367 HVDSLLSGGENMEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHLLQQARGGVPIPPLSAAKAKS--LGN---------NLRPSLAERLRMDVARDMMVLAARASDAAFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELLVNTSPLTNALQASGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSPSSSWRVKVLAAGVN-ERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP 1482
            +V++L    + MEVVP ++EG V +WDL+E +WEHA + RL V   +HP+LL+E S NT+ SR    E+MFEK  VPA F++K+AVL  F+ GR T+ + D GG ++ V  V DG+V  K IV+S +G +AL    L+ ++     V I P  + K     LG          N   S     +  +A D+     R +D+ FEE   Q+ +IP+ P+ LPDG  V IG DRF++PE++ N S L +          P +  +A+   R    +  L   +++++  C+ + +  L +G++LAGG      + ER++ E+   ++    + RVKV+++G N ER+ S W+GGSIL SLGSF +MW+SK EYEE+G   + +KCP
Sbjct:   88 YVNALGFRRDFMEVVPTVKEGLVADWDLVEGLWEHAFRERLLVDPREHPMLLAEPSHNTNSSRETTVELMFEKHQVPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVAAVHDGYVLRKAIVRSPIGGDALTEAMLNTVESMN--VMIKPRYSFKRTEVRLGEFRVTDLDLPNTTESYRRYQQRCIAADIKESVCRVADSTFEEK--QYQNIPTQPYELPDGNIVEIGADRFRIPEIIFNPSILKSI---------PGMEKVAEEQGR----ISGLPTMVLESINKCDADIRRELFSGILLAGGNAVMTQMKERLEKEL---MEEAPQAARVKVISSGNNIERRFSVWIGGSILASLGSFQQMWMSKPEYEENGPSFVHRKCP 451
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BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Match: ARP4_ORYSI (Actin-related protein 4 n=7 Tax=Poaceae TaxID=4479 RepID=ARP4_ORYSI)

HSP 1 Score: 232 bits (592), Expect = 2.920e-66
Identity = 139/375 (37.07%), Postives = 217/375 (57.87%), Query Frame = 1 
Query:  394 ENMEVVPLMEEGFVTNWDLLERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPAEFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLGSNALQRYYLHLLQQARGGVPIPPLSAAKAKSLGNNLR-------PSLAERLRM----DVARDMMVLAARASDAAFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELLVNTSPLTNALQASGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACEREQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSPSSSWRVKVLAAGVN-ERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP 1482
            ++MEV+  M++G VT+WD+++ +W HA + RL +   +HP+L++E S NT + R K  E+MFEK+ VPA F++K+AVL  F+ GR T+ + D GG ++VV  V DG+V  K +  S +G   L    +  L+    GV I P  + K K +G           P+  E  ++     +A D+     R  D AF+E A  ++++P+  + LPDG  + +G DRFK+P++L N S L+  +        P +   A S+      +R L   ++ +V  C+ + +  L++ ++L+GG      L ER++ E+   L+  S + RVKVLA+G + ER+ S W+GGSIL SLGSF +MW SKAEYEEHG   I +KCP
Sbjct:   90 DHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESK--GVVIRPRYSFKKKEVGPGEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVA--YANVPTTSYELPDGQTIEVGADRFKIPDILFNPS-LSQTI--------PGVDGFADSMS-----VRGLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSILQLKERLEKEV---LEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGVSYIQRKCP 443
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1116.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHI8_ECTSI2.100e-22468.21Protein binding protein, putative n=2 Tax=Ectocarp... [more]
A0A6H5KHN4_9PHAE3.530e-10045.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z589_9STRA3.280e-9743.86Actin family n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TUS4_9STRA1.470e-8340.64Actin related protein n=2 Tax=Monodopsidaceae TaxI... [more]
A0A812X7D1_SYMMI9.920e-8138.80ARP4 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A1Y1ILU8_KLENI8.600e-6938.40Actin-related protein 4-ARP4 n=1 Tax=Klebsormidium... [more]
A0A2K1JED8_PHYPA2.450e-6736.46Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A2R6WRM8_MARPO2.460e-6735.20Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A388K3W8_CHABU6.740e-6737.50Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
ARP4_ORYSI2.920e-6637.07Actin-related protein 4 n=7 Tax=Poaceae TaxID=4479... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1116contigA-nodosum_M_contig1116:196754..206877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHI8
Preferred nameACTL6A
PFAMsActin
Model size1817
Max annot lvl2759|Eukaryota
KEGG koko:K05692,ko:K11340,ko:K11400,ko:K11652,ko:K11767
KEGG Pathwayko04015,ko04145,ko04210,ko04390,ko04391,ko04510,ko04520,ko04530,ko04611,ko04670,ko04714,ko04745,ko04810,ko04919,ko04921,ko05100,ko05110,ko05130,ko05131,ko05132,ko05164,ko05205,ko05225,ko05410,ko05412,ko05414,ko05416,ko05418,map04015,map04145,map04210,map04390,map04391,map04510,map04520,map04530,map04611,map04670,map04714,map04745,map04810,map04919,map04921,map05100,map05110,map05130,map05131,map05132,map05164,map05205,map05225,map05410,map05412,map05414,map05416,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0000123,GO:0000228,GO:0000278,GO:0000281,GO:0000785,GO:0000790,GO:0000812,GO:0000902,GO:0000904,GO:0000910,GO:0001654,GO:0003407,GO:0003674,GO:0003682,GO:0003712,GO:0003713,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006333,GO:0006337,GO:0006338,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006464,GO:0006473,GO:0006475,GO:0006508,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007049,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0007423,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016043,GO:0016070,GO:0016358,GO:0016514,GO:0016569,GO:0016570,GO:0016573,GO:0016579,GO:0016586,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0021510,GO:0022008,GO:0022402,GO:0022411,GO:0022607,GO:0023052,GO:0030030,GO:0030154,GO:0030182,GO:0031011,GO:0031175,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031491,GO:0031493,GO:0031498,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032984,GO:0032986,GO:0032989,GO:0032990,GO:0032991,GO:0033202,GO:0033554,GO:0034508,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035060,GO:0035267,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0042393,GO:0042766,GO:0043010,GO:0043044,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043933,GO:0043967,GO:0043968,GO:0043981,GO:0043982,GO:0043983,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0051301,GO:0051382,GO:0051383,GO:0051716,GO:0060041,GO:0060147,GO:0060148,GO:0060255,GO:0060303,GO:0060964,GO:0060966,GO:0060968,GO:0061640,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070603,GO:0070646,GO:0070647,GO:0070925,GO:0070983,GO:0071564,GO:0071565,GO:0071704,GO:0071824,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097346,GO:0097458,GO:0097485,GO:0097659,GO:0120036,GO:0120039,GO:0140110,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902493,GO:1902494,GO:1902562,GO:1902680,GO:1903047,GO:1903506,GO:1903508,GO:1904949,GO:1990234,GO:2000112,GO:2000637,GO:2001141
Exons9
Evalue2.84e-227
EggNOG OGsCOG5277@1|root,KOG0679@2759|Eukaryota
Descriptionchromatin organization
Cds size1485
COG categoryZ
BRITEko00000,ko00001,ko03019,ko03021,ko03029,ko03036,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1116.20.1prot_A-nodosum_M_contig1116.20.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1116 196754..206545 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866513.1021066-CDS-A-nodosum_M_contig1116:196753..1967981680866513.1021066-CDS-A-nodosum_M_contig1116:196753..196798Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 196754..196798 +
1680866513.1201136-CDS-A-nodosum_M_contig1116:197764..1981521680866513.1201136-CDS-A-nodosum_M_contig1116:197764..198152Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 197765..198152 +
1680866513.1306324-CDS-A-nodosum_M_contig1116:199385..1995191680866513.1306324-CDS-A-nodosum_M_contig1116:199385..199519Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 199386..199519 +
1680866513.1384535-CDS-A-nodosum_M_contig1116:199980..2001231680866513.1384535-CDS-A-nodosum_M_contig1116:199980..200123Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 199981..200123 +
1680866513.1463807-CDS-A-nodosum_M_contig1116:200988..2011181680866513.1463807-CDS-A-nodosum_M_contig1116:200988..201118Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 200989..201118 +
1680866513.154673-CDS-A-nodosum_M_contig1116:201619..2017871680866513.154673-CDS-A-nodosum_M_contig1116:201619..201787Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 201620..201787 +
1680866513.1641986-CDS-A-nodosum_M_contig1116:202467..2026261680866513.1641986-CDS-A-nodosum_M_contig1116:202467..202626Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 202468..202626 +
1680866513.1778343-CDS-A-nodosum_M_contig1116:203963..2041601680866513.1778343-CDS-A-nodosum_M_contig1116:203963..204160Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 203964..204160 +
1680866513.1871321-CDS-A-nodosum_M_contig1116:206424..2065451680866513.1871321-CDS-A-nodosum_M_contig1116:206424..206545Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 206425..206545 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866513.1990921-UTR-A-nodosum_M_contig1116:206545..2068771680866513.1990921-UTR-A-nodosum_M_contig1116:206545..206877Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1116 206546..206877 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1116.20.1

>prot_A-nodosum_M_contig1116.20.1 ID=prot_A-nodosum_M_contig1116.20.1|Name=mRNA_A-nodosum_M_contig1116.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=495bp
MGFAGEDFPRAYFTSLIGRTVDVEATRKLKAEKTAAASAAAGAASPPRVG
GGKGKSPATLKWRERWPQSHGTAAAAARASSNATASSLVGGRADGDGSAG
RGTGNGDGRGGGDEDGDVVFRWHVDSLLSGGENMEVVPLMEEGFVTNWDL
LERVWEHAEQSRLKVKLSDHPVLLSEKSFNTSRSRLKYTEIMFEKFGVPA
EFISKDAVLACFSIGRTTATLTDVGGDTSVVTPVVDGWVESKGIVKSLLG
SNALQRYYLHLLQQARGGVPIPPLSAAKAKSLGNNLRPSLAERLRMDVAR
DMMVLAARASDAAFEENAPQFSSIPSVPFRLPDGTEVGIGTDRFKVPELL
VNTSPLTNALQASGESCPPALRALAKSLDRPGFVLRPLQASIVQAVMACE
REQQPSLMNGVVLAGGGCCFEGLPERVKAEIEGCLDSPSSSWRVKVLAAG
VNERKVSTWLGGSILGSLGSFHEMWLSKAEYEEHGAQMIDKKCP*
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mRNA from alignment at A-nodosum_M_contig1116:196754..206877+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1116.20.1 ID=mRNA_A-nodosum_M_contig1116.20.1|Name=mRNA_A-nodosum_M_contig1116.20.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10124bp|location=Sequence derived from alignment at A-nodosum_M_contig1116:196754..206877+ (Ascophyllum nodosum dioecious)
ATGGGCTTCGCCGGGGAGGACTTTCCCAGGGCTTACTTTACCTCAGTGAG
TGCCCTTTCGTCTTCAAGACGGTACTAATAGTAAACATAGTAATACATAC
ATAGTACTTCCGCCCTCTCCTCTGCCGTAGACGTCGAACATGCCGCCACC
ATGACAGCAGTAACCTCGATTTTTCATTGTAGAACGCTAGCTGAAAAAGC
TCTGATTTTTGCAGGCAAGCAGCACGTGTTGATTCGAGGACCGATGGGAT
ATACTCACACACTAATTGTTCCCTCGGTGGACCAGATTGCTTAGGAGCGG
TAATGTTATGACGCATTCTGAAATCACTAGAGCTACAAGTATCACATGCT
TGGCTTTCTTGAGCAAGCAGCTCTTTCTTCCGCGCCTGACAAGCGCCCGG
CTGATGTCACCGGCCGGGCGAGGTGTTTGTGTTGTTCGAGATATACGCTG
CCGGCCCCGCGGACTTGGAAGGCATTTAGGGTTCTTTTATGAGACGGTGC
TCGAGTCTGGGCCGAAACACGCTGTGATTGATTGTTTGGGCTGGAACAGG
CTGTGATTGGTGTAGGTTGTAAGGCTGCTTGCTGCACGAGCCATAGAGTT
TTCCTTGTAAAACGGAGGCCCTCGCACACGTGGGAACGAGGAAGCTGCGG
TAACATTTCTCTCGCGCGTGTTCGGACCGTCATTTCGGAATGAGAAGGTC
GCCATACCGTGGACACCGCCCGTGCAGGGAGTGAGTGCTATAGTCGTTGC
GGTTGCGAACAGGTCTATGAAGGGGGAGGGGAAGACGTCTACAAACCATC
CCCATTCACACGTTCTTCCTTTTTAAGCTCGGCTCGGGAAGCGATTGGAC
GCGAATGGACGCAAAAAAAAACACGTACTGCTTACTAGTTAATCATATGT
CCTAAAGTCCACACATACCTCCCCTCCGCCCGCCGCTGAGAGACGCCTTC
TTCGAAAACGAACCCCTCCCCCAATATCCCTCCTCCCACCGACAAACCCA
CGATAATGCAGTTGATCGGACGCACGGTGGATGTCGAGGCCACTAGAAAG
CTGAAGGCGGAGAAGACGGCCGCCGCCTCAGCAGCAGCAGGGGCCGCCAG
CCCCCCCAGAGTCGGAGGGGGAAAGGGGAAGTCGCCCGCCACGCTCAAGT
GGAGAGAGAGGTGGCCGCAAAGCCACGGAACAGCGGCGGCGGCGGCTAGA
GCAAGCAGCAATGCGACGGCCTCTTCTCTGGTGGGGGGAAGGGCTGATGG
AGACGGGTCCGCAGGAAGGGGAACTGGGAACGGTGACGGACGGGGAGGGG
GTGACGAAGACGGGGATGTGGTGTTTCGTTGGCATGTCGACAGCTTGTTG
AGCGGTGGAGAAAACATGGAAGTGGTCCCGCTTATGGAGGAAGGTTTTGG
TGAGTGCTTTGGGTGCGGGAGTTCGAGAAAAGCTGCAGGTTTCGTCTTGC
CGCGCGCTCGCGGGCTGCTGCAAAACGTCAAGCGGCGACGCCTCATTGGC
TAGGAATATTTCGGTTTGTTTGTGTTTGTGTTTGTGTGGGGGGCGACATA
GGTCGTCCAAGCGCATTTTGCCTGTTCGTAGCTTTTAGGGCATATTCTTA
CGAATTGATGGCAGTACTAGGCGGTGCCGTGCGCGCGAGCCGAAACAGGA
CAATCTGGGGTTTCCATGAAATGCAACGAGATGCGTTGGTGATTTCCAAC
CGAGAGCGTGTGTGGTCGAAGACGTCCGTGTATCAGACGCGGAGAAATAT
AGGCGAATATGGAAACCCCAGCGTAGGCATAATTAGCTTGAAAAACGGGA
GGCATTCCCCCATCCACATCCACGTTGGTGTATGTATGTATGGTCATCAC
ATATAGCAAGAGTATAGATCAACTGGGGTAAGGTTGCCAATGCTGCTCGT
GGTCAGCTAAACAAGGAAAATTAATATTTCCCTGTTTCTGTTCGCGCCTG
AGAGTTTTGTCTCGCGAGACGAGTTCGGCCGTTCCGTCCCGCGTCAGCCT
GCTCATTCTCCACACTCAGGCTGAATCTAGTGCTTACTCACGGGACTCCT
CCCGCTTTCCGCCGCGGCTTCCATTTATTCATTTATACCGCCATACGCCA
TCGGACCAGTCCCGAGTTTATCGGGTCACGCAATTGCGTGCCGATGACGT
TCACTGCCGAGAGTCCGCCGGCACAGGGCGAGTAGTCCTCAAGGTAGTTC
GAGTAACGGCTGCTGCCTTTGCAGGTCACCATGGACCAATTAATGTGCAC
CTGCCTCTCTTTTCTCACACTTGCTATCGGTATGAAGTGGATATGTTACA
GCATGCTGAAAGTATCGGAGCTACAGTAGTATACAGCAGCTCTACTGCTG
TATACCGCTAAAGCCCGTCGAAGTAAAACCATACGTAGCTGTCACTAAAC
GGACACGACATACCAGACAGCTTCAGATTGAACGGCCGCGAGCTTCAGCC
CCTCCGCTAGCCTCTTGTTTTTTCCAACGTTTGCTCCATGTCGGCATCTT
GAATGTATCTACTGTATATACACGGTTGCATTACAGAAGATAACTTCTCA
AGGACATGAGAGGTCCAACAGAGAAGCAGCAGCAGCAGCAGCGGCCCCAC
GCGCGCCATACCCTCGCAAATTTCGCGCGCAGTGACTAACTGGGACCTAT
TGGAGAGGGTGTGGGAGCATGCGGAGCAGTCACGCTTGAAGGTCAAGCTG
TCTGATCACCCGGTGCTGCTCTCCGAGAAGTCGTTCAACACCTCCCGAAG
CAGGCTAAAGTACACGGTGAGTGAATCATTCTGTGAATCATTCTGTACCA
CGTGGTGCAACGTACTCGTGGAGAATGCGTCCTTCCTGCTCCCGTCTTAT
ATCAGCAACCTTCGATGATTTCCAAAGGCACACGGATCTTTTTTTTTCTA
AGCTGTTTTCCTTCCATCCAACATTATAATTCAGATATGTAGCTATAAAA
AGCAAAAACATCGGGGCTCTTCTTGTCATCCTGTTTGTACCCGTTACACC
TATATACCTATGTTACATCTATAGACTCCACCCCGCACTTCCCGTACATA
CAACGTATGTGTGCTATATTTATGTACGTGTATGTGTGGTGGGCAGCTGC
TCAGCTCAGGATGCTGCCTGCCCCCCTCCCCCAAGTGCCTCGCGCCTCCC
GGGGCGCTCAGTCATTAAAAAACTCCTCCTGTCTTGAACCAGCCCAACAC
CGCACCACTTTCGCATGCGGGTAACAGGAGATCATGTTCGAGAAGTTCGG
CGTGCCGGCGGAGTTCATATCGAAGGATGCGGTGCTCGCCTGCTTCTCGA
TCGGCCGGACGACGGCGACGCTAACAGACGTGGGCGGGGACACTAGCGTG
GTGACCCCTGTGGTGGACGGGTGAGGATGTTTTACATTACTAACGGGGTG
TACTTGTAACTATATAAAGTACAGCACTTGTCCCCCCTGCTCCCCCGCTT
CCCCCCCCGCCCTTTATCCCTTTGAGTCTGTCGTAGCCCTCTCCGGAAAG
ACCTTCTTTTGGAAAACTTTCCGAGGCGTGTGTAGGATTCCTCGCCTTGC
CCCCACCACGACCCTTTTTTTTCTTTTTTTTCTTCTTTAATGCCACTTAT
AGCCGATGGACCTCATCATTACCATCCTGCCTGTGGTCACAAAGGATCTT
CCCATCTCTCCCCGGTTCACGCCTTACGATTTTTTATCGCGATGCAAGTT
CAGCACTCTTACAACTCGTCAACCAATGGTTGAATTTCACTTACTCACGT
TCCCACGCTTTCCGTTACGAAAGAAAGAACACAAATCCTACTTTGGTAAG
AATCGAACTCACGACTTCCGCACTAGCAGGTGTGCAGTTTACCTACTAGA
CCACTCGGGCGACGAGTACTATGAAACAAATTGACAAAAGTCCAGCAAAA
CGCTCCTCGTTAGACTTTAGACTTTAGACATTAGACTTTAGTATGTGCGC
GACTGTTAGTGGTCTGCGTCCTTACCTCCCCGCTCTCAAACGTACCTGGT
GTAGATTACACTCGTCATCTGTTTAGTATCGTGTGCTCTGTGGTGTGGGC
TCTGCCCTCAAGATTTTAATGTTACCGCACCGTGCCAGCATCTCTCGCCG
CGGTTGGTCTGTAAAACACATCACACGGACTGTGCAGATCTTTAAACCCA
TCACATGGGCTTTGCATCTTCCCcctCCCCCCCCCCCCTATATTTATTTA
TATATACTAAATTGATATATGTGTGTATCCTTCAGGTGGGTGGAGAGCAA
GGGCATAGTGAAGTCCCTCCTGGGGAGCAACGCGCTGCAGCGGTATTACC
TGCACCTCCTCCAGCAGGCCAGGGGGGGTGTCCCGATTCCTCCCCTCTCG
GCGGCAAAGGCTAAGGTGCGAGCGAGCTACCACCGTCAGCGCGATTCTTC
CTTCTACCCTCCTATGCCTCTTCTTTTTCGCTGCTGTTCCCACCATCGTT
CATAGGCTCTAGAGCAGTGTCAGTGTCAGCTCTATTACCACCCGAAGCAT
CATGGTCCAGTCGCCAGAGCTAGTAGGCTACGCTATCGGGTAGCAGTACA
TTCTTATCTGCGCGGAAGTTGAAGCGCGTCGTTTTCGTTTTCCTCTCCCT
CACAGGCACGGCGTCTGCAATCTACCGCATATATATGATACCTACAGCGA
TCGCTCGAAGTGTTTAACTCTACGGATGTCGTGTTTCTTCGCCATCCTTA
CAAAGCATACGGAATACAGCATTATGCGTCCCTTTCTCGACATGCTTAAG
AATACATATATGAGATAATACTAGTGTGTCTTCCTCCCTTTCTGGCATTT
AATACCTGGTAGGGCGTAAcccctCCCCCCCCCCCACCCCCACCCCTGGA
ATATCGTTGAAAACAGTCGCTCGGAAACAATTTGCGACCATCCCTGGCGG
AGAGGCTGCGGATGGACGTGGCGAGGGACATGATGGTGCTGGCCGCGCGC
GCGTCCGACGCCGCTTTCGAGGAAAACGCCCCCCAATTCTCTAGCATACC
CTCGGTGCCCTTCCGGCTCCCCGACGGCACCGAGGTGGGTGCGGTTCGCG
GGCGGCCATTCGGGTAGAGGGTCGAACGAGACGATCGCCGCCGCGCGATC
CATATATACCGCTCCGCATTACATGTCATGTTTACTTCTATTAATATTAT
AATATATCGACGCCGCGCGAAGAACGGGCAGCGTTCTGTGTGTATATATG
TGTGTGTGTCTGGGTTAGTTTTTTTGGGGGGGGGGggaGGAAGAGAATGT
TCAACGGATTTTTTCGGGGGACAGTCGGTAAAACTGCGGAAGTTTTTGTG
GTGCGCTTGAGGTGCAGGGGCGGCGTTTGCTCCACCCGACCCGATCCTCC
GACCCCGCGACCCTGGAAGCGGAAGAGGCGTGTCTAATGGGAACGAGGAT
GTGTAACCTTCGTCGTGCGGGGCTTGTCTGGCGTGGAAAAAGCCCCCCCC
CCCCATGGGTTGAAGTAATTTCTTCGGTGAGGTCCGCATCTGGCAGGCAG
CGTGTTCTTCTGTTTCCTCTACCCGTCGAGAAACACACCGCGCCCATGCC
TTGCCGCTACTCGCCTGGGAAGCGACGAGAGCTATATGATGGCATGGGCG
TACCCATCGCTATGCCATGCGTATCAGCGTGTAGAGGCTTTTAGCCCGCC
GCAGGTACCACGGCTGTTCACTCCCTCCATCCGCTGTCCTTGCCCTCCAC
GGTTGGGGCAACAGGTGGGCATCGGCACTGATCGGTTCAAGGTTCCGGAG
CTGCTGGTGAACACGTCCCCCCTGACGAACGCCTTGCAGGCCAGCGGCGA
GTCTTGTCCGCCGGCGTTGAGGGCCCTCGCGAAGTCGCTGGACCGGCCGG
GTTTCGTGCTTCGCCCCTTGCAGGTTCAACGTTCTGTAGAAAGTAGTCTA
ATATATGAGGTACATTACTTTTTGTTTTGTTTTTCTATTCCAGCAGGTAA
CGCATACTATCCTACAGAGTAGTAGTACACTTTGATTTTATCCATCGTGA
TTCTAAAAATACTGCACAGTGGATTTGTGTGTGTATATATCTTATGTTTA
GCGCATTGCACGGAAGGTGGATTAAAAATCCTGTGTGACCTTCCTCCTGT
GTGACCCCGGCTGGTACGTCCAACTTGATGTCCAGAATGGATGGGAAGAA
AACACACACACACACACGTAACAATGGAGGTGCGGTGCGCCGTGTCGTTT
CTTGCCACAATCGTTTTGCAATATTCTCCTTATCTACGTACGTAATCTTA
ACCGGTCGCCCCGGTAGCTCAGAGGTAACCATGTAACCTTCTGACACGTT
GGGACGTGAGTTCGATCCCGGCAAACGAGATTTTTCCCACTAAAAAACTA
AAAACTAAAACTAAAAATGCCCAACGGGTGGAGAACGATTAAATCGTTAG
TACACAAAATTCGACTTCACGGTCGACGAGGGAAAGGAATGGCTGAATCC
TTCTCGCGAGAAAAACTAAGGCACGCACCGCAGAAAGGTGTAGGAGAAAT
TTGTGTGATCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACGAACTT
GATGTCCAGAATGAATGGGAAGAAAACACACACACACGTAACAAGTATCG
TTGATCCCACCTTGGGAGGATCAACGCGAGTGGCATAGAATGACTAAGAT
GACAGAGCCGGATTGCGCGGTTATGTGCAATTTAATAAATACACACACAC
ACACACACACACACACAATCTTCAAGAGAACGCCCCCCTCGGGGACAAAA
CACCCCTCCCCCCCTATTTTTATTTTGCATTTCTgaGTTAGATCCCATCA
AACATTGTGGCGATGAGAGTATCTTGCCAAGGGTTGTCACCTAAGTGTAC
AGTAAAACGGTGGGTTCCTCCTCGACATTATACTGTCGACCCTATGATAT
TACTATCGGGGAACCCAATTAAATGCCGCGTAAGAGTTTTTGTAGGTACA
CCCTAAGTTCCCATCTAAACGTTTTGACATTTTCCCCCCCTGACTGGGTG
GATACTCTATTATATTGATATTACTACAAGCTTAGATGCCTTAGTTAGTT
AGTTCAGATTTTTCTTTAAACACTATATACAGTGGGGGGCGGGGGGGGGA
GGGTCCCAGGCAGTGTTTTTCTCTCCAAACATTACGATATTTTGTGCGTT
TGTAAGTACCCATCCAGAGTTTACATCCTCCCCGGCGCGGAAATAAACTT
GTCCATAAAGGCGTCGATCGTACAAGCCGTGATGGCGTGCGAGCGGGAGC
AGCAGCCGTCCCTCATGAACGGCGTGGTGCTGGCCGGGGGGGGTTGCTGC
TTCGAAGGGCTGCCGGAACGCGTGAAGGCGGAGATCGAGGGCTGTCTCGA
CTCGCCGTCCTCGAGCTGGCGGGTCAAGGTCCTCGCGGCGGGCGTCAACG
AGCGAAAGTGAGTGGGAGGGTGATCGTTTCGTTTGCATCATATCTATTAA
TCAATCATAGCAATTAAGTAATGACGGCTATTAATCAATCATGGCTACTA
ATTAATCATAGCTAATAATCAATCACAGCTATTAATCAATCATACTTTTT
TCAACATACCCACTTCATACGCGAGACCAAATTCTCAGGCACGCACGGGG
ACAGGGGAATATTATTTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGC
AACCTTACCCCGTTGATCCATACTCTGCTATATGTGATGACCATACATAC
ATACATACCAATAGTGGGTGTGGGAAAAGAGAGGTGCATATTAATTGGTC
CATGGTGACCTGCAAAATGGCAGCAGCCGTTACTGAAACTACCTTGCGGA
CTACTGGACGACTGAACCCGTCTCGCGAGACCAAATTCTCAGGCACGTAC
GGGGACAGGGGGATATTCATTTTCCCTGTCCAGCTGACCACGAGCGGGAT
CGGCAACCTTACCCGGTTGATCCATACTCTGCTATATGTGATGACCATAC
ATACATACATACATACATATCCTTGGTAGCTATTAATCAATCATAGCTAT
TTAACACTAATAATACAATTGTCGTGTCAAATACCGGTGTGAAGAATGAG
CCTTCTTAAACAGCACTCGGTCTTAAGAATGCTATTAATAGACAAAAATG
AAAGGATAGTCTATACGAAAACTTTTTTTTTTCGAGGGTATTGTGTCGCC
TTCTCCCCTCCCCCCCCCTTCCCTGCTATGTCTACAGCGCTAGAGCTATG
CCGTGTGGCGAAACATGACATCAAGCCCGTGCTTCATTTTTTCAAGTTAG
AAATCCACTTGTTTTGAGTTTTTGTTGTTGTTACAAAGTGATGTTTTTGT
GGGATGGTTTTTGATTATAACCAGCGACACTCGATAACGTTTCTAAATGA
ATGTGCTTATTCAACATGTAGAGGCACAAGGAACACATACCATGCTCTAT
TACTAAGTATATTGCCTTGGGTGGGACAAATGGGCGGAACCTCACAGGAG
GAAGGAGATTTAATCCACCTTTTCCGTGCCTTGATTTTTGTCCTCTCCCC
TTTTATTGGCAGTTGTTATTATTAAATATTATATTATACTAAATATTAAT
ATTATTAATAGTAGTTGGGATCATAACGCCTTCTTACCCTGACTATATAT
ATATATATGTATTTCATCCACTTGTAGACCGAACTCATTCTACTGTATGC
CAGAGCCTAAAGACCTAGCGTATCAGATACGGGGATAGTTGAAAATACCT
CCCCGGGGACAGATTTTGCCGCATCCCCTGCCCGTACAGTGCTTGGTACA
AGTAAGTAACGGTATTTTTTGCAGCCGTAGGTATAGGGTAATAATGCATT
AATTAATGTACATCGATCAGGTCGCTCGCACGTGCTTGTGATAGAGCTGT
AACGCTTTTCTGGACTTTGCATTGTATAGTGTATACTACTGTATAAGATG
GGCTCAAAACTATCCTTTTCTTATCAAGAGTCGAGACATCTCGCGGCGCC
CTTGCATGAGTGGAACCTATAACAAACTGTCGACAAAACGAAATATTTCT
CCCTTTTCCGTACACTGCTCCTATTAATGATTAATGATTAATGAGACTTA
TAACAAACTGTCGACAAAACGAAATGTTTCTCTCTTTTCCGTACACTGCT
CCTATATGATTAATGATTAATAATTACTAGCTCGAGGCTTTTTTTTCTTC
TTTTTCTATTCTAGTCTTGTGTTCAGCAGTCTTTCATTATCATTACCAGG
TACAAGTATTATTTTTTTGGTGTTTGGTTCTTCCGTTTTTTTTCGTCTTT
AAAAAagtGTTACCGCTGAGTAGAACCAAGCATTTTTATCGTAAAATTAA
AATACACCGCCTTGAGGGGCCGACTTTCGGCAAAACGATGCTACAGTACT
ACCCGCTGGTGTCTGTTTTGGGCATACcaggtaaCGTTGATCAAGTGCGA
TCAATCTATCGATACTGTAGTCAAGTGTAATTTGAAGCCTGCCTTCACTC
TTACTTCTCGAAGTTCCCTTTCGAGTTATATCCCTTCTAAGTTAGTTTTA
TCCCACATCACTTGTTGACCCCTCTTCATTTTGAAGCTATTTGTTTTTTC
TGTATCCctttCTTTTCCTTCTCGCAggggtCGGTCGGTCATCACATGCC
TCTGCTCTCTTTTTTATCCCTCTTTTTCATTTTTGAAGACATTGTTTTCT
CTGTCATCCCTTTTCTCGCAGGGTCAGCACGTGGCTAGGCGGGTCTATCC
TGGGATCGCTCGGAAGCTTCCACGAGATGTGGCTCTCCAAGGCGGAGTAC
GAAGAACACGGCGCGCAAATGATAGACAAGAAATGCCCTTGAAAAGCTGC
TTCTCTACGAAAACTTTTACTACTCCGTATACATTATTCGTAGCACTCTA
TTAGAGTCTAGGAAGAGACCCGCGGTGCTGCTGGCGTTACACCGACATCG
TGGCTTTTTTCAGTTCATGGACTTGTGCGGGTGGGATACCAGTGGAGCAC
ACGACCGGGGAAACAGAGATCTCGGGCCATCCTTCCGAACGAAACAAAAT
GAGTTCCTCCCCCTCACCCCCTCTCTATGATCGGTAATCCTCGTGGCTCG
TGTGGCTGTAGCCGCGGATTCTCCTTCGACGCGCCATATCGCGAGAGAGC
TCGAACTGCTGGTGAACAAAGATG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1116:196754..206877+

>mRNA_A-nodosum_M_contig1116.20.1 ID=mRNA_A-nodosum_M_contig1116.20.1|Name=mRNA_A-nodosum_M_contig1116.20.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1485bp|location=Sequence derived from alignment at A-nodosum_M_contig1116:196754..206877+ (Ascophyllum nodosum dioecious)
ATGGGCTTCGCCGGGGAGGACTTTCCCAGGGCTTACTTTACCTCATTGAT
CGGACGCACGGTGGATGTCGAGGCCACTAGAAAGCTGAAGGCGGAGAAGA
CGGCCGCCGCCTCAGCAGCAGCAGGGGCCGCCAGCCCCCCCAGAGTCGGA
GGGGGAAAGGGGAAGTCGCCCGCCACGCTCAAGTGGAGAGAGAGGTGGCC
GCAAAGCCACGGAACAGCGGCGGCGGCGGCTAGAGCAAGCAGCAATGCGA
CGGCCTCTTCTCTGGTGGGGGGAAGGGCTGATGGAGACGGGTCCGCAGGA
AGGGGAACTGGGAACGGTGACGGACGGGGAGGGGGTGACGAAGACGGGGA
TGTGGTGTTTCGTTGGCATGTCGACAGCTTGTTGAGCGGTGGAGAAAACA
TGGAAGTGGTCCCGCTTATGGAGGAAGGTTTTGTGACTAACTGGGACCTA
TTGGAGAGGGTGTGGGAGCATGCGGAGCAGTCACGCTTGAAGGTCAAGCT
GTCTGATCACCCGGTGCTGCTCTCCGAGAAGTCGTTCAACACCTCCCGAA
GCAGGCTAAAGTACACGGAGATCATGTTCGAGAAGTTCGGCGTGCCGGCG
GAGTTCATATCGAAGGATGCGGTGCTCGCCTGCTTCTCGATCGGCCGGAC
GACGGCGACGCTAACAGACGTGGGCGGGGACACTAGCGTGGTGACCCCTG
TGGTGGACGGGTGGGTGGAGAGCAAGGGCATAGTGAAGTCCCTCCTGGGG
AGCAACGCGCTGCAGCGGTATTACCTGCACCTCCTCCAGCAGGCCAGGGG
GGGTGTCCCGATTCCTCCCCTCTCGGCGGCAAAGGCTAAGTCGCTCGGAA
ACAATTTGCGACCATCCCTGGCGGAGAGGCTGCGGATGGACGTGGCGAGG
GACATGATGGTGCTGGCCGCGCGCGCGTCCGACGCCGCTTTCGAGGAAAA
CGCCCCCCAATTCTCTAGCATACCCTCGGTGCCCTTCCGGCTCCCCGACG
GCACCGAGGTGGGCATCGGCACTGATCGGTTCAAGGTTCCGGAGCTGCTG
GTGAACACGTCCCCCCTGACGAACGCCTTGCAGGCCAGCGGCGAGTCTTG
TCCGCCGGCGTTGAGGGCCCTCGCGAAGTCGCTGGACCGGCCGGGTTTCG
TGCTTCGCCCCTTGCAGGCGTCGATCGTACAAGCCGTGATGGCGTGCGAG
CGGGAGCAGCAGCCGTCCCTCATGAACGGCGTGGTGCTGGCCGGGGGGGG
TTGCTGCTTCGAAGGGCTGCCGGAACGCGTGAAGGCGGAGATCGAGGGCT
GTCTCGACTCGCCGTCCTCGAGCTGGCGGGTCAAGGTCCTCGCGGCGGGC
GTCAACGAGCGAAAGGTCAGCACGTGGCTAGGCGGGTCTATCCTGGGATC
GCTCGGAAGCTTCCACGAGATGTGGCTCTCCAAGGCGGAGTACGAAGAAC
ACGGCGCGCAAATGATAGACAAGAAATGCCCTTGA
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