mRNA_A-nodosum_M_contig1116.12.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: D8LHK0_ECTSI (6-pyruvoyltetrahydropterin synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK0_ECTSI) HSP 1 Score: 280 bits (715), Expect = 2.920e-92 Identity = 129/158 (81.65%), Postives = 143/158 (90.51%), Query Frame = 2
Query: 98 MMRILIASFIAVMICVTSAHHPSAGAGNGHRGYSLGIRDSIMIAHSFEGQEFGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPGENTTTEFMCKVIFDELVAKCGDHFHGTLCIKLWESHKAWACYEGLVGEE 571
MMR+L ++ +M +TSAH+P+AG G GH+GYSLGIRDSIMIAHSFEG +FGPAQ+MHGATYTVDAEFK DALVEKSNWVVDIGAASEML++VLSKYNFKNLNE+FPG+NTTTEFMCKVIFDEL AKCG FHGTLCIKLWESHKAW CYEG VGEE
Sbjct: 1 MMRLLAMVWVCLMAVLTSAHNPTAGGGGGHKGYSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDVGEE 158
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: A0A7S4DL62_HETAK (6-pyruvoyltetrahydropterin synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL62_HETAK) HSP 1 Score: 198 bits (503), Expect = 2.570e-60 Identity = 92/126 (73.02%), Postives = 109/126 (86.51%), Query Frame = 2
Query: 185 HRGYSLGIRDSIMIAHSFEGQEFGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPGENTTTEFMCKVIFDELVAKCGDHFHGTLCIKLWESHKAWACYEGLV 562
H +SLG+RDSIMIAHSF+G+EFGPAQQMHGATYTVD EF+A+ LV+K NWVVDIG ASE+LS+VL KYNFKNLNELFP +NTTTEFMCK IFD++ A C ++F G++C+KL ESHKAWA Y G V
Sbjct: 26 HAKFSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAA-CLENFKGSMCVKLHESHKAWASYTGDV 150
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: A0A7S2V5M2_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5M2_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.250e-58 Identity = 89/147 (60.54%), Postives = 112/147 (76.19%), Query Frame = 2
Query: 113 IASFIAVMICVTSAHHPSAGAGNGHRGYSLGIRDSIMIAHSFEGQEFGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPGENTTTEFMCKVIFDELVAKCGDHFHGTLCIKLWESHKAWACYE 553
I + +M + AH +GY+LG++DSIMIAHSF+G+EFGPAQ++HGATYTVD EF AD L K NWV+DIG ASE+L VL+KYNFKNL+ELFP +NTTTEFMCKVIFD++ A+ + F G+L +KLWESHKAWA Y+
Sbjct: 12 IIGILCIMFTLAYAHK---------KGYTLGVKDSIMIAHSFQGEEFGPAQKLHGATYTVDVEFMADVLESKCNWVIDIGLASEILGKVLAKYNFKNLDELFPDDNTTTEFMCKVIFDDMSAELANKFKGSLSVKLWESHKAWASYQ 149
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: A0A836CJP8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP8_9STRA) HSP 1 Score: 186 bits (473), Expect = 6.060e-56 Identity = 86/125 (68.80%), Postives = 97/125 (77.60%), Query Frame = 2
Query: 194 YSLGIRDSIMIAHSFEGQEFGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPGENTTTEFMCKVIFDELVAKCGDHFHGTLCIKLWESHKAWACYEGLVGE 568
Y+LGIRDSIMIAHSF+G EFGPAQQMHGATYT D EF L NWV+DIG AS MLS VL++YNFKNLNE+FP ENTTTEFMC+ IFD + C F GT+ +KLWESHKAWA YEG V +
Sbjct: 10 YTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYEGAVAD 134
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: L1J9Q7_GUITC (6-pyruvoyltetrahydropterin synthase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1J9Q7_GUITC) HSP 1 Score: 181 bits (458), Expect = 5.600e-53 Identity = 95/186 (51.08%), Postives = 113/186 (60.75%), Query Frame = 2
Query: 59 IQDPRTRALRTSNMMRILIASFIAVMICVTSAHHPSAG---------------AGNGHRGYSLGIRDSIMIAHSFEGQEFGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPGENTTTEFMCKVIFDELVAKCGDHFHGTLCIKLWESHKAWACYEGLVGEE 571
+ P L MMR + ++ TSA PSA G G R YSLG+RDSIMIAHSF G+EFGPAQ MHGATYTVD EF ++L + NWV+DIG ML VL +YNFKNLNELFPGENTTTEFMCK IF+ L + F G++ +KLWESH AWA Y +G +
Sbjct: 4 VNSPWLTLLVLPAMMRGFTEATAPALVSRTSAAVPSAHFSSSPMKNFATSMHLRGGGER-YSLGLRDSIMIAHSFTGKEFGPAQNMHGATYTVDVEFHVESLAPRLNWVLDIGEGMTMLKKVLGEYNFKNLNELFPGENTTTEFMCKKIFEGLCVELKGKFKGSITVKLWESHSAWASYTNDIGAD 188
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: W7T312_9STRA (6-pyruvoyltetrahydropterin synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T312_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.940e-52 Identity = 84/132 (63.64%), Postives = 104/132 (78.79%), Query Frame = 2
Query: 194 YSLGIRDSIMIAHSFEGQEFGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFP-GENTTTEFMCKVIFDELVAK-CG-------DHFHGTLCIKLWESHKAWACYEGLV 562
+SLGIRDSIMIAHSF+G++FGPAQ +HGATYTVD F++ LV K+NWV+DIG AS LS +LSKYNFKNL+++FP GENTTTEFMC+ I +L A C + F G++C+KLWESHKAWACYE +V
Sbjct: 33 FSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: A0A7S0BJC5_9RHOD (6-pyruvoyltetrahydropterin synthase (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJC5_9RHOD) HSP 1 Score: 157 bits (398), Expect = 9.670e-45 Identity = 79/120 (65.83%), Postives = 93/120 (77.50%), Query Frame = 2
Query: 191 GYSLGIRDSIMIAHSFEGQEFGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNEL--FPGENTTTEFMCKVIFDELVAKCGDHFHGTLCIKLWESHKAWA 544
GYSLG+RDSIMIAHSF+G EFGPAQ +HGATYTVD EF + LV SNWVVDIG A ++LS VL YN+KNL++L F G+NTTTEFMCKVI D++ + +H G L I L ESHKAWA
Sbjct: 13 GYSLGVRDSIMIAHSFKGAEFGPAQGVHGATYTVDCEFSSINLVPGSNWVVDIGKALQVLSDVLKVYNYKNLDDLEEFKGQNTTTEFMCKVIHDKVSWEMKEHVTGDLKITLHESHKAWA 132
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: B7FYC8_PHATC (6-pyruvoyltetrahydropterin synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYC8_PHATC) HSP 1 Score: 155 bits (393), Expect = 1.150e-43 Identity = 79/130 (60.77%), Postives = 94/130 (72.31%), Query Frame = 2
Query: 188 RGYSLGIRDSIMIAHSFEGQE-FGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFP-GENTTTEFMCKVIFDELV---AKCGDHFHGTLCIKLWESHKAWACYEGLV 562
R + LGIRDS+MIAHSF FGPA MHGATYT D EF D L +NWV+DIG ASE+L +VL+KYN KNL+E+FP G+ TTTEFMCK I +LV + FHG +C+KLWESHKAWA Y G+V
Sbjct: 26 RSFRLGIRDSLMIAHSFHRHPAFGPAGGMHGATYTCDVEFSKDTLDPDTNWVMDIGKASELLCTVLAKYNLKNLDEVFPNGQLTTTEFMCKQIHMDLVDLIRREFHDFHGEVCVKLWESHKAWAAYSGVV 155
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: A0A7S0WCE1_9CRYP (6-pyruvoyltetrahydropterin synthase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WCE1_9CRYP) HSP 1 Score: 155 bits (391), Expect = 5.880e-43 Identity = 77/147 (52.38%), Postives = 95/147 (64.63%), Query Frame = 2
Query: 161 PSAGAGNGH------------RGYSLGIRDSIMIAHSFEGQEFGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPGENTTTEFMCKVIFDELVAKCGDH-FHGTLCIKLWESHKAWACYEGLV 562
P+A + GH GY+LG+RDSIMIAHSF+G EFGPAQ MHGATYTVD E + L +K NWVVDIG +L VL YN+KNL+E+FPG NTTTEFM + I + + A H G++ +KLWESH AWA Y +
Sbjct: 42 PAAASSTGHGVGCMRLRGGQQEGYTLGVRDSIMIAHSFKGPEFGPAQGMHGATYTVDLEVSVEKLADKLNWVVDIGVLLGILKEVLGVYNYKNLDEVFPGVNTTTEFMSQKIHEGVAAALKKHGVVGSMSVKLWESHNAWATYSNKI 188
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Match: A0A5J4YKC1_PORPP (6-pyruvoyltetrahydropterin synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKC1_PORPP) HSP 1 Score: 151 bits (382), Expect = 2.080e-42 Identity = 75/123 (60.98%), Postives = 86/123 (69.92%), Query Frame = 2
Query: 194 YSLGIRDSIMIAHSFEGQEFGPAQQMHGATYTVDAEFKADALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNEL--FPGENTTTEFMCKVIFDELVAKCGDHFHGTLCIKLWESHKAWACYEG 556
++LG+RDSIMIAHSF G EFGPAQ MHGATYTVD EF D LV+ NWVVDIG A + L L YN+KNL+EL F G NTTTEFMC I ++ A F GT+ + L ESHKAWA Y G
Sbjct: 3 FTLGVRDSIMIAHSFSGAEFGPAQNMHGATYTVDCEFGTDKLVDGCNWVVDIGEALDALGKCLQAYNYKNLDELPQFKGVNTTTEFMCMQIQKDMAAAFKGKFSGTIKVTLHESHKAWASYTG 125 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1116.12.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1116.12.2 >prot_A-nodosum_M_contig1116.12.2 ID=prot_A-nodosum_M_contig1116.12.2|Name=mRNA_A-nodosum_M_contig1116.12.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=167bp MMRILIASFIAVMICVTSAHHPSAGAGNGHRGYSLGIRDSIMIAHSFEGQback to top mRNA from alignment at A-nodosum_M_contig1116:139208..148750+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1116.12.2 ID=mRNA_A-nodosum_M_contig1116.12.2|Name=mRNA_A-nodosum_M_contig1116.12.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9543bp|location=Sequence derived from alignment at A-nodosum_M_contig1116:139208..148750+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1116:139208..148750+ >mRNA_A-nodosum_M_contig1116.12.2 ID=mRNA_A-nodosum_M_contig1116.12.2|Name=mRNA_A-nodosum_M_contig1116.12.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=501bp|location=Sequence derived from alignment at A-nodosum_M_contig1116:139208..148750+ (Ascophyllum nodosum dioecious)back to top |