mRNA_A-nodosum_M_contig1116.10.3 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A6H5J960_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J960_9PHAE) HSP 1 Score: 398 bits (1022), Expect = 7.370e-131 Identity = 227/448 (50.67%), Postives = 278/448 (62.05%), Query Frame = 2
Query: 35 MEDLFEEMQENARALWC-PST-IKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGP---WDDLASLAAPDQE---VTVDFTPDGRGDCVVEL-----------------DSRKSKVESGEGLNLKPPGTPVDVD--------TVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKA--------DGTGFELEIEEGSVPWIPL---------------------------------DPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSRKYFKN-VKMLLHAGGEGTIEEPAQDDEDR 1153
ME+LFE++Q++ R+ W PS+ ++RL+ +P A+FF++YVAT+TPVI+SGG + G WDDLASLA D E VTVDFTPDGRGDCV+++ DS +G + K GT V+ T VFVKPEER+M+F +F+ +L +SST G VPYLSHQNDSLRQEFPGLM DVEPFL LAREAFGN+P+AVNLWIGD RS+SAVHKDHYENMYCVV G+K FTLLPPSD+LFLYEQ++PQGRYR+++ G GF IP+ DPACPDLEKYPLFR ASPV C VGPGDILYLP+LWYHRV+Q G+T+AVNYWHDMQFD KYV+YRFLQ L+ K + V+ G G+ P++ E R
Sbjct: 1 MEELFEQLQDDTRSFWQNPSSGVRRLDTMPPPAEFFRDYVATNTPVILSGGGC-FKGGGRRSCWDDLASLAGRDSEGLEVTVDFTPDGRGDCVIDVANSMLSELSTSDANAKRDSAIGGGAAGAEGSRKSCGTGDAVNGGXXXXXGTTAVFVKPEERRMKFEAFISTLLKEAAAKAGDKSSSTRTSGGVGGGVPYLSHQNDSLRQEFPGLMEDVEPFLALAREAFGNEPDAVNLWIGDDRSLSAVHKDHYENMYCVVRGEKHFTLLPPSDVLFLYEQEYPQGRYRQRSVDGGEGEGRGGGFXXXXXXXXXXXIPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPACPDLEKYPLFRFASPVHCRVGPGDILYLPSLWYHRVSQRGITVAVNYWHDMQFDHKYVHYRFLQTLAAKLREGGVRRPGGVGFGGSSGRPSESPEAR 447
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A6G0XCV2_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCV2_9STRA) HSP 1 Score: 299 bits (765), Expect = 4.250e-94 Identity = 157/361 (43.49%), Postives = 208/361 (57.62%), Query Frame = 2
Query: 35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGT------------GFELEIEEG---SVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSR 1069
M + ++ E+++ W P TI R++ PS +F+++YV+ + PV+I+ W DD D +VTVD TP G GD VV+LD + VFV PEER M F FV ++ +G VPYLSHQNDSLR++FP LM DV+P ++ A EAFGN PEAVNLWIGD+R+VS +HKDHYENMYCVV G+K FTLLPPSD+ FLYE ++P GRY K T + +E++E + PWIP+DP PD KYPL +H + + G+ LYLP+LWYHR Q T++VNYWHDM+FD KY YY F+ G++R
Sbjct: 1 MNQVLAQLSEDSKDFWTPRTIARISR-PSPLEFYRDYVSKNIPVVITDAFDHWPALHKWTDDYLVETLGDHQVTVDVTPFGYGDAVVDLDDKS------------------------VFVMPEERNMTFRDFVQILHDSQFDG-----------------VPYLSHQNDSLREQFPALMQDVDPMVDFAAEAFGNGPEAVNLWIGDERAVSTMHKDHYENMYCVVRGRKHFTLLPPSDVAFLYETEYPTGRYVHKNTITPRDFNRPCCGHPSWSIEMKEDETETTPWIPVDPLNPDTTKYPLAKHVVHLEVTLEVGETLYLPSLWYHRATQLCETVSVNYWHDMEFDAKYAYYNFVHGVAR 319
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: W4GTP9_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GTP9_9STRA) HSP 1 Score: 288 bits (736), Expect = 1.060e-89 Identity = 151/363 (41.60%), Postives = 207/363 (57.02%), Query Frame = 2
Query: 35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGT----------------GFELEIEEGS--VPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLS 1066
ME +FE++ E+++ W P +I R+ P+ +F++ YV+ + PVII+ + W ++ A + +VTVD TP G GD V V T VFV PEER M F F+ ++ +G VPYLSHQNDSLR +FP L+ DV+P L A EAFGN PEAVNLWIGD+R+VS +HKDHYENMYCVV G+K F+LLPPSD+ FLYE ++P GRYR + T + + +++ + PWIP++P P +EKYPL +H P+ + G+ LYLP+LWYHR Q T+AVNYWHDM+FD KY Y+ F+ G++
Sbjct: 1 MEQVFEQLSEDSKDFWTPRSIARIPQ-PTPLEFYRNYVSKNIPVIITNAMDSWPAMAKWTNEYLVDALGETQVTVDVTPFGYGDAVT------------------------TVGTENVFVMPEERSMAFRDFLAILHDPCFDG-----------------VPYLSHQNDSLRDQFPALVDDVDPMLAFASEAFGNTPEAVNLWIGDERAVSTMHKDHYENMYCVVRGRKHFSLLPPSDVAFLYETEYPTGRYRSTRETTIHDETPTILHQCRSHPSWSIAMQDNNDLTPWIPVNPLHPQVEKYPLTKHLQPLVVTLEAGETLYLPSLWYHRATQLTETVAVNYWHDMEFDAKYAYFNFVHGVA 321
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A836CM99_9STRA (Cupin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM99_9STRA) HSP 1 Score: 290 bits (742), Expect = 1.560e-89 Identity = 163/382 (42.67%), Postives = 216/382 (56.54%), Query Frame = 2
Query: 35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPWDDLASLA-APDQEVTVDFTPDGRGDCVVELDS---------------RKSKVE------------------SGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRING----EEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFELEIEEGSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLS 1066
M+ L E+Q+N +LW P ++R++ P++ +F+++YVAT+TPVII G A W D A + A + VTVD TP G GDC E D R VE S GL L P TV + + R F + P + T K + + VPYLSHQN SL +EF L V L LAR+ F N+PEAVNLW+GD R+VSA HKDH+EN+YCV+ G+K FTLLPP+DILFLY++ RY +++++E+ VPWI DPA P+ ++PL R+ASPV C VGPG+ LYLPA+WYHRVAQ+G+T+AVNYWHDM FD K+VY+ FL GL+
Sbjct: 1 MQSLLAELQDNCSSLWAPRHVQRIDP-PTAEEFYRQYVATNTPVIIRGLLGKWADAAHWSDAALMEKAGELTVTVDVTPGGHGDCCAEADGEELCRVPYLSVNDRQRCCSVERLPAAVHDRGLGXXXXXXSQSGLGLHP--------TVVRVLSCDTRNFNFTIGAKTIAPEAHVYKPPRTLHPKKHNCSRAFSFDGVPYLSHQNSSLTREFAPLAQRVPSCLPLARDTFRNEPEAVNLWVGDGRAVSACHKDHFENLYCVLRGEKRFTLLPPTDILFLYQRQCRAARYAHTP--RSWKVQLEDERVPWISADPAEPNFNRFPLLRYASPVQCAVGPGETLYLPAMWYHRVAQKGVTVAVNYWHDMAFDHKFVYHNFLVGLA 371
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A024UD90_9STRA (JmjC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD90_9STRA) HSP 1 Score: 287 bits (734), Expect = 1.980e-89 Identity = 146/365 (40.00%), Postives = 206/365 (56.44%), Query Frame = 2
Query: 35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFELEIEEGSV--------------------PWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLS 1066
M+D+ ++ E+ + W P +I R+ P+ +F++ YV+ + PVII+ W D+ + D +VTVD TP G GD V +D+ +VF PEER M F +F +++ +G VPYLSHQNDSLR +FP L+ DV+P L+ A EAFGN PEAVNLWIGD R++S +HKDHYENMYCVV G+K FTLLPPSD+ FLYE++FP GRYR + T + ++ S+ PWIP+DP P ++++PL +H P+ + G+ LYLP+LWYHR Q T++VNYWHDM+FD K+ Y+ F+ G++
Sbjct: 1 MDDVLAQLGEDTKDFWAPRSIARIPP-PTPMEFYRHYVSKNIPVIITHAVDHWPALTKWTDEYLTDTLGDAQVTVDVTPSGYGDAVTSVDTH-----------------------TKVFAMPEERSMSFRTFFEILRDPTFDG-----------------VPYLSHQNDSLRDQFPDLLEDVDPMLDFAAEAFGNSPEAVNLWIGDARAISTMHKDHYENMYCVVRGRKHFTLLPPSDVAFLYEREFPTGRYRHTSS-TSTKSSVDSASIQYPCTNHPSWSIVMKDDEMTPWIPVDPLDPQVDEFPLAKHIQPLHVTIEAGETLYLPSLWYHRATQLTETVSVNYWHDMEFDAKFAYFNFVHGVA 323
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A485KNB8_9STRA (Aste57867_9582 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNB8_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.910e-88 Identity = 157/357 (43.98%), Postives = 203/357 (56.86%), Query Frame = 2
Query: 47 FEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPWDD---LASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFE--------------LEIEEGSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLS 1066
E++ E+++ W P TI+R++ PS +F++ YV+ + PVII+ A W D + SL + ++VTVD TP G GD V + R EVFV PEER M F F+D++ +G +PYLSHQNDSLR +FP LM DV+ + A EAFGNDPEAVNLWIGD+R+VS +HKDHYENMY VV G+K FTLLPPSD+ FLYE +FP GRY A E ++ E PWIP+DP PD YPL +H P+ V G+ LYLP+LWYHR Q T++VNYWHDM+FD KYVYY F+ G++
Sbjct: 12 LEQLGEDSKDFWTPRTIERISA-PSPLEFYRNYVSKNIPVIITDAADHWPAMHKWTDAFLVESLGS--KQVTVDVTPSGYGDAVHHVQGR------------------------EVFVMPEERDMTFKEFLDILHDPAFDG-----------------IPYLSHQNDSLRVQFPELMPDVDATIAFAAEAFGNDPEAVNLWIGDERAVSTMHKDHYENMYTVVRGRKHFTLLPPSDVAFLYETEFPTGRYVHVASKDTSETLVPSEGHPNWSIRMQEPEDMTPWIPVDPLNPDTTAYPLTKHLVPLEVTVETGETLYLPSLWYHRATQHCETVSVNYWHDMEFDAKYVYYNFVHGVA 324
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: K3WFY4_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFY4_GLOUD) HSP 1 Score: 283 bits (724), Expect = 2.610e-87 Identity = 161/404 (39.85%), Postives = 218/404 (53.96%), Query Frame = 2
Query: 32 DMEDLFEEMQENARALWCP-STIKRLNGIPSSA-QFFKEYVATSTPVIISGGAATL----RMAGPWDDLASLA--APDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKA----------DGTGFELEIEE---------------------------------GSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSRKYFKNVK 1090
D+ +++E+ W P + R++ SA +F++ +V+ S PV+++ A ++ W D A L A D VTVD TP G GD V++L++ +S + T EVFV PEER+M F+ F+ + DG E VPYLSHQNDSLR EFP L DV +LELA++AFGN+P+AVN+WIGD+R+VS +HKDHYENMYCVV GQK FTLLPP+DI LYE +FP RYR ++ D L +E G PWIP+DP D K+PL +H P+ C V G++LYLPA+WYHR Q TI+VNYWHDM+FD +YVYY F+ ++ K+ K +
Sbjct: 8 DVHASITKLREDVADFWAPLHEVARVDASSLSALEFYRRFVSKSVPVVLTNVMANAPDWQQVLQHWHDDAYLVEQAGDDPVTVDVTPFGFGDAVLDLNTDRSDAQK----------------TSEVFVMPEEREMTFSEFLAALNDRDGF----------------EGVPYLSHQNDSLRDEFPMLYQDVPAYLELAKDAFGNEPDAVNIWIGDERAVSTMHKDHYENMYCVVRGQKHFTLLPPADIASLYESEFPSMRYRHQSSKEKAKEDDDDKDAPVLSADEIAANDAEAARLTALFHEKYPQHTSWRIVASPHTGDTPWIPVDPLQIDTTKFPLAQHLKPIECVVNEGEVLYLPAMWYHRATQLCQTISVNYWHDMEFDCRYVYYNFVHDIAAKFAKKAE 379
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A8K1CDY8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDY8_PYTOL) HSP 1 Score: 277 bits (708), Expect = 2.430e-85 Identity = 154/371 (41.51%), Postives = 209/371 (56.33%), Query Frame = 2
Query: 44 LFEEMQENARALWCP-STIKRLNGIP-SSAQFFKEYVATSTPVIISGGAAT-----LRMAGPWDDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKA---------------------DGTGFELEIEE-GSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSR 1069
L E++E+ W P +I R++ S F+++YV+ S PVI++ + +R A D+ A D E+TVD TP G GD V+ELD E+FV PEER+M F ++ +G + VPYLSHQNDSLR EFP L A V P +EL +EAFGNDP+AVN+WIGD+R+VS +HKDHYENMYCVV G+K FTLLPPSD+ LYE+++P RYR ++ D + F + EE G PWIP+DP ++++YPL H +P+ C V G+ LYLPA+WYHR Q TI+VNYWHDM FD +YVYY ++ +++
Sbjct: 9 LVAELREDVADFWQPLQSIARVDTRSLSPLAFYRQYVSKSVPVILTHAMESEQWQHVRTAWQDDEYLVQQAGDGEITVDITPFGYGDAVLELDREN-----------------------ELFVMPEERRMTLREFFRVLNDREGF----------------DGVPYLSHQNDSLRDEFPRLYAQVPPCIELGKEAFGNDPDAVNIWIGDERAVSTMHKDHYENMYCVVKGRKHFTLLPPSDVACLYEREYPSARYRHESTLGQDAYDEATTAAFHSCHPEDTSWFIVPSEETGMTPWIPVDPLRINIKRYPLADHLNPLQCVVEAGETLYLPAMWYHRATQLCPTISVNYWHDMDFDCRYVYYNYVHRVAK 340
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A1V9ZSZ4_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSZ4_9STRA) HSP 1 Score: 280 bits (715), Expect = 5.400e-85 Identity = 153/375 (40.80%), Postives = 211/375 (56.27%), Query Frame = 2
Query: 35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFE-----------------LEIEEGSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSRKYFKNVKMLLHA 1105
ME +F ++ E+A+ W P ++ R+ PS F+++YV+ + PVII+GG W DD ++ VTVD TP G GD V+ LD+ T +VFV+PEER + F F L +G +PYLSHQNDSLR +FP L+ DV+ + A EAFGN PEAVNLWIGD+R+VS +HKDHYENMYCVV G+K FTLLPPSD+ FL+E +P RY ++ F+ +E E S PWIP+DP D ++P +H +P+ + G++LYLP+LWYHR Q T+AVNYWHDM+FD KYVY+ F+ G++ K +++ H+
Sbjct: 1 METVFAQLSEDAKDFWAPRSVARIPP-PSPLVFYRDYVSKNIPVIITGGIDHWPAMRKWTDDYLLQTIGNKTVTVDVTPSGYGDAVLALDA-----------------------TTKVFVQPEERDVTFREFHTLYHDAAFDG-----------------IPYLSHQNDSLRDQFPQLVGDVDAAIGFAAEAFGNTPEAVNLWIGDERAVSTMHKDHYENMYCVVRGRKHFTLLPPSDVAFLHETTYPTTRYVHESRTARFDAAALRPSTHPSWFVHVPVEAAE-STPWIPVDPLNVDAAQFPNAKHIAPLEVVLEAGEMLYLPSLWYHRATQLCDTVAVNYWHDMEFDAKYVYFNFVHGVATA-AKELRLKTHS 332
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A1V9Z6A2_9STRA (JmjC domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6A2_9STRA) HSP 1 Score: 276 bits (707), Expect = 5.740e-84 Identity = 149/378 (39.42%), Postives = 213/378 (56.35%), Query Frame = 2
Query: 35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFELEI--------------EEG--SVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSRKYFKNVKMLLHAGGEG 1117
M++L ++ ++A+ W P I R+ P++ +F+++YV+ + PVII+ W D+ A ++ VTVD TP G GD V+ L+++K+ +VFV+PEER M F+ F+++ +G VPYLSHQNDSLR++FP L+ DV+ ++ + EAFGN PEAVNLWIGD R+VS +HKDHYENMYCVV G K F LLPPSD+ FL+E ++P RY K++ F+ EG + PWIP+DP D +K+P +H P+ + G++LYLP+LWYHR Q T++VNYWHDM+FD KYVY+ FL +V +H G G
Sbjct: 1 MDELLNQLSDDAKDFWMPKKISRIPP-PTAVEFYRDYVSKNIPVIITNAINHWPALQKWTDEYFDEAIGNEIVTVDVTPTGYGDAVLTLENKKT----------------------QVFVQPEERNMTFSKFLEIYHDKQFDG-----------------VPYLSHQNDSLREQFPQLVHDVDRVIDFSAEAFGNMPEAVNLWIGDDRAVSTMHKDHYENMYCVVRGLKHFILLPPSDVAFLHETEYPTTRYVHKSNVDQFDPSTLIQSKNPNWFIHMPPEGRETTPWIPVDPVAIDTDKFPKAKHIQPLEVVLEEGEMLYLPSLWYHRATQLCDTVSVNYWHDMEFDAKYVYFNFL---------HVTTTVHGGHNG 329 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1116.10.3 >prot_A-nodosum_M_contig1116.10.3 ID=prot_A-nodosum_M_contig1116.10.3|Name=mRNA_A-nodosum_M_contig1116.10.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=375bp MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAback to top mRNA from alignment at A-nodosum_M_contig1116:133889..139023- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1116.10.3 ID=mRNA_A-nodosum_M_contig1116.10.3|Name=mRNA_A-nodosum_M_contig1116.10.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5135bp|location=Sequence derived from alignment at A-nodosum_M_contig1116:133889..139023- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1116:133889..139023- >mRNA_A-nodosum_M_contig1116.10.3 ID=mRNA_A-nodosum_M_contig1116.10.3|Name=mRNA_A-nodosum_M_contig1116.10.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=1125bp|location=Sequence derived from alignment at A-nodosum_M_contig1116:133889..139023- (Ascophyllum nodosum dioecious)back to top |