mRNA_A-nodosum_M_contig11116.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: D7FNW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW0_ECTSI) HSP 1 Score: 256 bits (655), Expect = 1.140e-84 Identity = 129/154 (83.77%), Postives = 135/154 (87.66%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKVKAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQLQECEGTSSLGF 563
GDFLEPETRLPFSDD+LR ID K KAAGLSKPSVL AKRDP RYAEQKFQQDALVGLERM SELVT ML VVEE DREEGEIRLV EIFPPFADLFKQI AAD+AFA QCMQHY SWL+GPPNRPTEDEMGFLDII+ FL QL++ G S LGF
Sbjct: 35 GDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLLVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDPGGNSQLGF 188
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: A0A6H5KJ97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ97_9PHAE) HSP 1 Score: 258 bits (658), Expect = 4.260e-81 Identity = 128/154 (83.12%), Postives = 136/154 (88.31%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKVKAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQLQECEGTSSLGF 563
GDFLEPETRLPFSDD+LR ID K KAAGLSKPSVL AKRDP RYAEQKFQQDALVGLERM SELVT ML+VVEE DREEGEIRLV +IFPPFADLFKQI AAD+AFA QCMQHY SWL+GPPNRPTEDEMGFLDII+ FL QL++ G S LGF
Sbjct: 339 GDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVADIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLTQLEDSGGNSQLGF 492
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: A0A7S2GAV9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAV9_9STRA) HSP 1 Score: 165 bits (418), Expect = 2.860e-47 Identity = 80/145 (55.17%), Postives = 105/145 (72.41%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKVKAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQLQE 536
GDF EPETR+ FS+ +L+ +D + A L+K SVL AKRDP+R+ E F++DA+ GLER ELV ML V+E D EEG++RLVM +FP F+DL +Q+ +AD FA CMQH+ S+L GPPNRPT D GFL I++ FL Q+QE
Sbjct: 149 GDFSEPETRIEFSESDLKKMDQMAEKAKLNKSSVLAAKRDPARFDEANFKRDAMNGLERCAGELVADMLNVIESNDPEEGQMRLVMYLFPLFSDLHRQLLSADTEFAAMCMQHFVSYLSGPPNRPTHDRFGFLPIVLHFLKQVQE 293
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: K3WA07_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA07_GLOUD) HSP 1 Score: 161 bits (408), Expect = 2.960e-45 Identity = 77/155 (49.68%), Postives = 111/155 (71.61%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKVKAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQLQEC-EGTSSLGF 563
GDF EP+TR+PFS++ LR ID + K A L+ SV EAK + ++ EQK ++D ++GLER E VT ML VVE D EEGE+ L+M +FP F+D+F+QI A+D+ +A+ CM H+ ++LQGP NRPTED G L +I+GFL+++ + + S+ GF
Sbjct: 195 GDFTEPQTRIPFSEENLRRIDYEAKVAKLNLKSVWEAKNNKHKFEEQKVKRDGILGLERCAGEYVTKMLDVVESDDSEEGEMMLIMSLFPSFSDIFEQIRASDKEYAKHCMNHFKAYLQGPKNRPTEDNSGLLPVILGFLDEVSKGGQSASAFGF 349
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: A0A485KK40_9STRA (Aste57867_8354 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK40_9STRA) HSP 1 Score: 156 bits (395), Expect = 3.850e-44 Identity = 76/154 (49.35%), Postives = 108/154 (70.13%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKVKAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQLQECEGTSSLGF 563
G+F EPETR+PFSDD L+ ID +VK++GL SV EA++ +++ K ++D L+GLER E+VT ML ++E+ D EEGE+RLVME+FP FADLF Q+ + D +A QC +H+ +L GPPNRPT DE G ++++ F+ Q +SS GF
Sbjct: 120 GNFSEPETRIPFSDDILKQIDAEVKSSGLELASVFEAQQQKAKFEALKVKRDGLLGLERCAGEVVTEMLSIIEDEDSEEGEMRLVMEVFPSFADLFGQLKSNDFEYASQCHKHFVEYLHGPPNRPTVDESGLFEVVLDFMKQT--AGKSSSKGF 271
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: A0A1V9ZCL8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCL8_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.370e-44 Identity = 80/158 (50.63%), Postives = 105/158 (66.46%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKV-------------KAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQLQE 536
GDF EPETR+PF DD LR +D +V KAAGL SV+ AK + +++ +QK ++D L+GLER E+VT ML+V+E+ D EEGE+RLVMEIFP FADL+ Q+ D +A QC +HY +LQGPPNRPT DE G ++V F+ Q E
Sbjct: 120 GDFSEPETRIPFPDDMLRQLDTEVCPRRGTLSVILRAKAAGLELQSVVTAKANKAQFEQQKIKRDGLLGLERCAGEVVTEMLQVIEDEDSEEGEMRLVMEIFPNFADLYSQLKMNDPEYAAQCHKHYLEYLQGPPNRPTVDESGLYQVVVEFMKQTAE 277
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: A0A8K1CDI6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDI6_PYTOL) HSP 1 Score: 157 bits (397), Expect = 5.150e-44 Identity = 77/155 (49.68%), Postives = 109/155 (70.32%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKVKAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQLQEC-EGTSSLGF 563
GDF EPETR+PFSDD+LR ID + K A L + SVLEAK + + EQK ++D L+GLER E +T ML+VVE D EEGE++L+M +FP F+ +F+QI +AD+ +A+ M H+ ++L+GP NRPT D G L +I+GFL+ + + S+ GF
Sbjct: 157 GDFSEPETRIPFSDDDLRRIDAEAKRAKLDERSVLEAKHNKHLFDEQKVKRDGLLGLERCAGEFITQMLEVVENDDPEEGEMQLIMTLFPSFSSIFEQIRSADKEYAKHSMNHFKAYLRGPKNRPTVDNSGLLSVILGFLDDVSNGRQAASAFGF 311
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: A0A067CQT9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQT9_SAPPC) HSP 1 Score: 155 bits (392), Expect = 1.210e-43 Identity = 77/142 (54.23%), Postives = 100/142 (70.42%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKVKAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQ 527
GDF EPETRLPF D L +D + KAAGL SV AK+D + + + K ++D L+GLER E+VT ML+V+E+ D EEGE+RLVMEIFP FADL+ Q+ D A+A QC +H+ +LQGPPNRPT DE G I++ F+ Q
Sbjct: 124 GDFSEPETRLPFPDAMLAQLDAEAKAAGLELGSVAAAKQDKAAFEQLKIKRDGLLGLERCAGEVVTEMLEVIEDDDGEEGEMRLVMEIFPNFADLYSQLKMNDAAYAAQCHKHFVEYLQGPPNRPTIDESGLYHIVLDFMAQ 265
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: A0A2D4BJA5_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJA5_PYTIN) HSP 1 Score: 155 bits (393), Expect = 1.670e-43 Identity = 78/155 (50.32%), Postives = 108/155 (69.68%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKVKAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQLQEC-EGTSSLGF 563
GDF EPETR+PF+D++LR ID + K A L + SVLEAK + + EQK ++D L+GLER E VT ML VVE+ D EEGEI L+ +FP F+ +F+QI AAD+ +A+QCM H+ ++L+GP NRPT D G L +I+ FL + + + S+ GF
Sbjct: 149 GDFSEPETRIPFTDEDLRRIDAEAKRAKLDERSVLEAKYNKHVFDEQKVKRDGLLGLERCAGEYVTKMLGVVEDEDAEEGEIELITVLFPSFSSIFEQIRAADKEYAKQCMNHFKAFLRGPKNRPTTDHSGLLPVILSFLEDVSKGRQDASAFGF 303
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Match: A0A1V9ZM66_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM66_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.540e-43 Identity = 74/142 (52.11%), Postives = 101/142 (71.13%), Query Frame = 3
Query: 102 GDFLEPETRLPFSDDELRAIDVKVKAAGLSKPSVLEAKRDPSRYAEQKFQQDALVGLERMLSELVTSMLKVVEELDREEGEIRLVMEIFPPFADLFKQIWAADRAFARQCMQHYTSWLQGPPNRPTEDEMGFLDIIVGFLNQ 527
GDF EPETR+PF D+ LR +D + AAGL SV+ AK+D + + + K ++D L+GLER E+VT ML+V+E+ D E+GE+RLVMEIFP FADL+ Q+ D +A QC +HY +LQGPPNRPT DE G +++ F+ Q
Sbjct: 123 GDFSEPETRIPFPDEMLRQLDTEATAAGLELGSVVAAKQDKATFEQLKIKRDGLLGLERCAGEVVTEMLQVIEDDDGEDGELRLVMEIFPNFADLYSQLKMNDPDYAAQCHKHYIEYLQGPPNRPTVDESGLYQVVLEFMAQ 264 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11116.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11116.1.1 >prot_A-nodosum_M_contig11116.1.1 ID=prot_A-nodosum_M_contig11116.1.1|Name=mRNA_A-nodosum_M_contig11116.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=99bp MLVEVGEHHYRFVRPNGRNVMYNLDSLVDYFISTGISWSPRPACLSPTTSback to top mRNA from alignment at A-nodosum_M_contig11116:3531..7484- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11116.1.1 ID=mRNA_A-nodosum_M_contig11116.1.1|Name=mRNA_A-nodosum_M_contig11116.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3954bp|location=Sequence derived from alignment at A-nodosum_M_contig11116:3531..7484- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11116:3531..7484- >mRNA_A-nodosum_M_contig11116.1.1 ID=mRNA_A-nodosum_M_contig11116.1.1|Name=mRNA_A-nodosum_M_contig11116.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=297bp|location=Sequence derived from alignment at A-nodosum_M_contig11116:3531..7484- (Ascophyllum nodosum dioecious)back to top |