mRNA_A-nodosum_M_contig1110.8.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: D7FMB3_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMB3_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 4.260e-163 Identity = 262/456 (57.46%), Postives = 302/456 (66.23%), Query Frame = 2
Query: 80 VVKDCVVTPCGHSFCRSCAGDAISRKHTCPVCQKAVIGGEAGLIRNFLVDEVTQALRKASDATDVAYMRLLFASAASSPASSA------------------------IRPPPIP--------NDKMDVRQEDEEGREIITSSADALSPIEAVLVGRMRDAFLGYQAYYERERAAHEAQVLSLSAQLEALERENLREGLHGELGENSAGERKAMALKAAIEDSRARFATGMEALLNDFDAHAAAAVPPPSLLPATVTVIVASRGVRFDTQLLPTHFPENVYDKVRSYYASTGDEVRGFGPGTRMHLQALSATRTCAGDS-----------------AQPPQTHPIDSLTQTVFSQSPGGRIGAGWAIVVDGAVLLASEEVKPCFAREFGQP--GKDIGETVDYFTCGECNLNWLCAACATHCHRACRDVKPFSLNHRPTWACCYCKKKRARIGCKLA 1294
+VKDCVVTPCGHSFCRSCAGDA++RKH CPVCQ VIGGEAGLIRNFLVDEVT LR+A++ TDVAYMRLLF +AA A + I PP P + V Q + LSP+E VLV RMR+AFLGYQ+YY RERAAH A+V L+AQL A+ RE G+ R+A AL+ AI++S ARF GMEALL DFDAHAAAA+PPPSLLP TVT+IVASRGVRFDTQLLPTHFPEN+Y KVR++YA++GDEVRGFG TR++LQ LSATR A Q HP+ TQTVFSQSPGGR+GAGWA+VVDG VLL SEE+KPCFA EF Q + VDYF+CG C LNWLCA+CA HCH C DVKPF LNH P WACCYC KKR+++ CKLA
Sbjct: 1 MVKDCVVTPCGHSFCRSCAGDAVTRKHCCPVCQVGVIGGEAGLIRNFLVDEVTSTLRRATEDTDVAYMRLLFDTAAGGTAGAXXXXXXXXXXXXXHPHVGSDDARFPIGFPPKPPFSAGNFRGETQPVEQNQPPLPRGVXXXXXXLSPVEEVLVRRMREAFLGYQSYYARERAAHAAEVSDLTAQLSAVRREETTPCQ----GQAETRARRAAALQGAIQESEARFNAGMEALLRDFDAHAAAALPPPSLLPCTVTLIVASRGVRFDTQLLPTHFPENIYGKVRAHYAASGDEVRGFGSTTRLYLQPLSATRRAGTGXXXXXXXXXXXXXXXAAVAAEGQVHPLSDATQTVFSQSPGGRVGAGWALVVDGPVLLKSEEIKPCFAVEFAQQQXXXXXXQRVDYFSCGACKLNWLCASCAAHCHGGCGDVKPFMLNHLPNWACCYCSKKRSKLECKLA 452
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: UPI0003F0E4CC (tripartite motif-containing protein 12A-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0E4CC) HSP 1 Score: 149 bits (375), Expect = 6.110e-36 Identity = 117/428 (27.34%), Postives = 190/428 (44.39%), Query Frame = 2
Query: 35 VDSILAALNCPLCFEVVKDCVVTPCGHSFCRSCAGDAISRKHTCPVCQKAVIGGEAGLIRNFLVDEVTQALRKASDATDVAYMRLLFASAASSPASSAIRPPPIPNDKMDVRQEDEEGREIITSSADALSPIEAVLVGRMRDAFLGYQAYYERERAAHEAQVLSLSAQLEALERENLREGLHGELGENSAGERKAMALKAAIEDSRARFATGME----ALLNDFDAHAAAAVPPPSLLPATVTVIVASRGVRF-DTQLLPTHFPENVYDKVRSYYASTGDEVRGFGPGTRMHL------QALSATRTCAGDSAQPPQTHPIDSLTQTVF---SQSPGGRIGA--GWAIVVDGAVLLASEEVKPCFAREFGQPGKDIGETVDYFTCGECNLNWLCAACATHCHRACRDVKPFSLNHRPTWACCYCKKKR 1270
V ++ + CP+C V+ + +TPCGH +C+ C + ++R+H CP C V L+ + D + Q +R+A + + Y L + S+ S +DV + SP+E VL +++ ++ YY+ R Q+ + +L E L + + E K L E + F + +E L +D + +P PSLLP V++++ ++ + F D Q+ P + ++ D ++S S D + F R L ++LS T D Q H T V + P + GA G I++ G V S+ K CFA F + G+ G++VDYFTC +C NW+C C CH+ V P+ +NH PTWACCYC KK+
Sbjct: 12 VKALWEHMTCPICMSVLCNTYMTPCGHRYCKECIIECVNRRHKCPCCNTDV-HKVRDLLHDHQFDVLIQNIREAKEMAEKTYFEELIHTVVSNANS------------LDVNN--------------SHSPVEEVLKKHLKEGLAAHENYYQELRTQCNHQIQMIEKELAGSTAE-----LQKQTQVQTDFEVKLKDLNEKYEYRKQTFLSELENCGRMLSQAYDRYLTEHLPTPSLLPIKVSLVLLNKEITFSDVQIKPNYSISHIQDILKSKMHSRDDPIITFDDDVRFILVGPFVKRSLSETHQLVNDVVQHEVVH-----TDVVLLPRNCCPILQFGAKSGSEIIITGRVKSQSDLPKLCFATTF-EEGR--GDSVDYFTCRDCGFNWVCKPCKESCHKDHMTV-PYIMNHHPTWACCYCPKKK 398
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: A0A7S4DCD0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCD0_HETAK) HSP 1 Score: 144 bits (362), Expect = 1.530e-35 Identity = 79/208 (37.98%), Postives = 118/208 (56.73%), Query Frame = 2
Query: 668 GMEALLNDFDAHAAAAVP-PPSLLPATVTVIV-ASRGVRFDTQLLPTHFPENVYDKVRSYYASTGDEVRGFGPGTRMHL-----QALSATRTCAGDSAQPPQTHPIDSLTQTVFSQSPGGRIGAGWAIVVDGAVLLASEEVKPCFAREFGQPGKDIGETVDYFTCGECNLNWLCAACATHCHRACRDVKPFSLNHRPTWACCYCKKKR 1270
G+ LL D+ A A A P P L+PA V V + + G+RF+ QLLPT FP V++K++S++ + GD+V F T + L T A + P + + +FSQ+PGGRI +G + V G + L S++ +PCFA FG P + T YF+C +CN+NW+C++CA CH ++ NH P+WACCYC +K+
Sbjct: 2 GVRLLLADYRAWLARAAPRSPFLVPAQVAVALPGAGGLRFNMQLLPTDFPSVVFEKIQSHFRAIGDQVLAFSTDTELRLLLPGVMENGGTPAVAAAGGRCPLA--VGEGAEPLFSQAPGGRIPSGSILEVIGDIALRSQQRQPCFANSFGTPNQPRDAT--YFSCKQCNMNWICSSCAKCCHTD-HELAVHIKNHNPSWACCYCPRKK 204
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: A0A1S3KHH0_LINUN (E3 ubiquitin-protein ligase TRIM39 isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KHH0_LINUN) HSP 1 Score: 143 bits (361), Expect = 6.710e-34 Identity = 110/432 (25.46%), Postives = 187/432 (43.29%), Query Frame = 2
Query: 35 VDSILAALNCPLCFEVVKDCVVTPCGHSFCRSCAGDAISRKHTCPVCQKAVIGGEAGLIRNFLVDEVTQALRKASDATDVAYMRLLFASAASSPASSAIRPPPIPNDKMDVRQEDEEGREIITSSADALSPIEAVLVGRMRDAFLGYQAYYERERAAHEAQVLSLSAQLEALERENLREGLHGELGENSAGERKAMALKAAIEDSRARFATGMEALLNDFDAHAAAAVPPPSLLPATVTVIVASRGVRF-DTQLLPTHFPENVYDKVRSYYASTGDEVRGFGPGTRMHLQALSATRTCAGDSAQPPQTHPIDSLTQTVFSQSPGG-----------------RIGAG--WAIVVDGAVLLASEEVKPCFAREFGQPGKDIGETVDYFTCGECNLNWLCAACATHCHRACRDVKPFSLNHRPTWACCYCKKKR 1270
V S+ C +C +KD +TPCGH +C C + ++R+H CP C + + LIR+ DE+ + + Y +L N + QE+ S + SP+E VL ++ + + ++ YY+ + H+ ++ L A + L E +GL + E+ + + + E+ + + + +D + +P ++LP +++ + + V D L P+ + V D ++S+ + GD++ FG + C G P + ID +TQ V S GG R G IVV G+V S+ K CF+ F + K VDYF+C EC +NW+C C CH+ ++ P+ +NH+PTWACCYC KK+
Sbjct: 13 VQSLSDHFICAVCMSQMKDSHLTPCGHRYCGDCIKECVNRRHKCPCCNNRIRVND--LIRDHQYDELVCLFNSEREKAEKKYFDILI------------------NKAAETNQEE---------SPSSFSPVENVLKSHVKKSLVAHERYYQELKREHKQKLAQLDADHQRLIEEAKMQGLTDDELEHQIAD-LSQNYQRHQEELDQELSECSQMVATAYDRYLTEHIPDLTVLPIKISLCILCKNVTVKDVMLKPSDSLKEVTDYLKSHMEAEGDDIIAFGENVKYF---------CFG----PFSKYSIDEMTQKVQSIEAGGISLPDVTLLEDDTRLILRYGLKPKSTIVVYGSVHCKSDLPKQCFSVNF-EANKVY--KVDYFSCKECGINWVCRPCMEVCHKD-HELVPYIMNHQPTWACCYCPKKK 397
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: UPI0018D6AFE7 (uncharacterized protein LOC119745409 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6AFE7) HSP 1 Score: 144 bits (364), Expect = 8.060e-34 Identity = 108/429 (25.17%), Postives = 194/429 (45.22%), Query Frame = 2
Query: 35 VDSILAALNCPLCFEVVKDCVVTPCGHSFCRSCAGDAISRKHTCPVCQKAVIGGEAGLIRNFLVDE-VTQALRKASDATDVAYMRLLFASAASSPASSAIRPPPIPNDKMDVRQEDEEGREIITSSADALSPIEAVLVGRMRDAFLGYQAYYERERAAHEAQVLSLSAQLEALERENLREGLHGELGENSAGERKAMALKAAIEDSRARFATGMEALLNDFDAHAAAAVPPPSLLPATVTVIVASRGVRF-DTQLLPTHFPENVYDKVRSYYASTGDEVRGFGPGTRMH---LQALSATRTCAGDSAQPPQTHPIDSLTQTVFSQSPGG-------RIGAGWAIVVDGAVLLASEEVKPCFAREFGQPGKDIGETVDYFTCGECNLNWLCAACATHCHRACRDVKPFSLNHRPTWACCYC-KKKRARIG 1282
V ++ CP+C E + +TPCGH +C C + ++R+ CP C V G + L ++ D ++ + + A D+ +++L+ + QE EE T+S + SPI L ++ ++ YY+ + ++ + Q+EA++ G++ + ++ L+ + T + L++ +D + +P PSLLP TV+V + + V D +L P ++ + V + GD + F P ++ L + R + + P D+ V PGG + G +V+ G + L SE K CFA+ F KD G+++DYFTC +C+ W+C +C CH+ + V P+ + H+PTWACCYC +KK+ ++G
Sbjct: 100 VKAVSEHFTCPICMERLSQTYITPCGHRYCGKCIKECVNRRSRCPCCNTKVTGDK--LFPDWAFDNLISMVSTEKNKAEDMYFVKLIQEAG---------------------HQEKEE-----TNSKEE-SPIVGTLQKHLKIGLASHEQYYQDFKREFTQRIQQVDVQMEAVQGG----------GDDVSMAQRLQELEVKKQSLHTELRTCTQLLVDAYDKYLTDHLPTPSLLPVTVSVRLQGKNVTLPDIKLKPHSSLSDIKEVVTRAMETRGDPIASF-PDDKVKFVLLGPIEKGREILAEFLEELSLTPDDTERSEVIRLLPGGCHPVLEFGVKPGSEVVIAGPIKLESEMPKQCFAQTFV---KDKGQSMDYFTCTDCSFKWVCRSCRDFCHKDHQTV-PYVMGHQPTWACCYCPRKKKCQLG 484
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: A0A7S4IK39_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IK39_9EUKA) HSP 1 Score: 140 bits (354), Expect = 5.570e-33 Identity = 113/442 (25.57%), Postives = 183/442 (41.40%), Query Frame = 2
Query: 35 VDSILAALNCPLCFEVVKDCVVTPCGHSFCRSCAGDAISRKHTCPVCQKAVIGGEAGLIRNFLVDEVTQALRKASDATDVAYMRLLFASAASSPASSAIRPPPIPNDKMDVRQEDEEGREIITSSADALSPIEAVLVGRMRDAFLGYQAYYERERAAHEAQ-----------VLSLSAQLEALERENLREGLHGELGE-NSAGERKAMALKAAIEDSRAR----FATGMEALLNDFDAHAAAAVPPPSLLPATVTVIVASRGVRF-DTQLLPTHFPENVYDKVRSYYASTGDEVRGFGPGTRMHLQALSATRTCAGDSAQPPQTHPIDSLTQTVFSQS-PGGRIGA--GWAIVVDGAVLLASEEVKPCFAREFGQPGKDIGETVDYFTCGECNLNWLCAACATHCHRACRDVKPFSLNHRPTWACCYCKKKRARIGCKLADR 1300
V +I CP+CF + C++TPCGH+FC C + ++ KH+CP C K + + L+RN D++ + + Y L I P +P+ M QE SPIE + M+ + + Y+ YY+ A AQ + S S++LE R R L + + K+ L+A D A+ F + LL+ +D + P LP ++V VA + + + + T + + A G+ + + L+ +P + Q+ P + GA G +VV G ++L S++ K CF + + G T DYFTC +CN+NW+C CA CH + + +H+PTW CCYC KK+ CKL ++
Sbjct: 18 VRAIFEEFCCPICFSPISQCMITPCGHNFCAQCIKECLNLKHSCPCCNKDTVKEQ--LVRNHHFDKLIDIILHEKEKASKNYFERL------------INKPNMPD--MTASQE--------LRVDSTFSPIEKIFHKHMKRSLMNYEEYYQEISAKFNAQCKAISSAYTEKLASNSSKLERKTRRIQRGASDRNLDQVKERYDNKSKKLQAECNDKLAQLEESFNESVRLLLDVYDKYLEGFAPAKEFLPVVISVFVAGKDTKLPNVSISRTDSINELKSVIERRLAEAGNPISSWSKNAVFVLK------------------NPFSEDAIVITDQNLPVVQYGAQQGSELVVKGGIVLESDKPKVCFTATYTK-----GATTDYFTCKDCNINWVCRECAEVCHSG-HKIVDYLKDHKPTWNCCYCVKKKK---CKLPNK 408
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: A0A7S2WUB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUB6_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.150e-30 Identity = 119/457 (26.04%), Postives = 179/457 (39.17%), Query Frame = 2
Query: 11 MERASFARVDSILA---ALNCPLCFEVVKDCVVTPCGHSFCRSCAGDAISRKHTCPVCQKAVIGGEAGLIRNFLVDEVTQALRKASDATDVAYMRLLFASAASSPASSAIRPPPIPNDKMDVRQEDEEGREIITSSADALSPIEAVLVGRMRDAFLGYQAYYERERAAHEAQVLSLSAQLEALERENLREGLHGELGENSAGERKAMALKAAIEDSRARFATGMEALLNDFDAHAAAAVPPPSLLPATVTVIVASRGVRFDTQLLPTHFPENVYDKVRSYYAST-----------------GDEVRGFGPGTRMHLQALSATRTCAGDSA--------QPPQTHPIDSLTQTVFSQSPG--GRIGAGWAIVVDGAVLLASEEVKPCFAREFGQPGKDIGETVDYFTCGECNLNWLCAACATHCHRACRDVKPFSLNHRPTWACCYCKKKRARIGCKL 1291
M R+S A ++ A A+ C +C + KD PCGHS+CR C + ++ KH CPVC A L RN VD V + + A Y + AA A P ND + +EA+ V ++ + +G+ ++ AHE + + LE+ E G +S + A+E A AT + LL +F+ H + A+P P+ L T+ + + TQ P + +R + A+T G +V R+ L C G S+ P P+ + + G GR+ + V + + CFA EF + GK G+ V Y+ C C LNW+C CA CH+ DV + H PTWACCYC KK+A C+
Sbjct: 1 MARSSSAATVAVSALQDAVRCAVCLDTPKDARTAPCGHSYCRGCIEEVLNLKHKCPVCNADA--SVASLTRNIAVDGVAELIEGAVQTGRENYAWRVVQGAAE---RDATMPGGAGNDGQ--------------------AALEAIFVEHLKRSLVGFAELFDTLHRAHERRCRDI---LESTE------------GSDSYR-------REALEAEAAAHATTKDGLLREFERHLSGALPSPAALATTMNL-----HINLSTQNGPIPAQRQIVTVMRVHGATTSRDVIEAARKAAVEVLGGQDVVDSISDERLRLVPRDNAAACGGSSSGTTPGIELPPDSAQPLFQCPEVQRGELGGVSGRLDGAYTNVEVALTAVLRNQTMQCFALEFVE-GK--GDPVTYYRCKTCELNWVCECCAGVCHKG-HDVSVYLARHVPTWACCYCYKKKATSKCRF 401
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: A0A078A4Q4_STYLE (Ring u-box domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A4Q4_STYLE) HSP 1 Score: 133 bits (335), Expect = 2.430e-30 Identity = 117/450 (26.00%), Postives = 189/450 (42.00%), Query Frame = 2
Query: 35 VDSILAALNCPLCFEVVKDCVVTPCGHSFCRSCAGDAISRKHTCPVCQKAVIGGEAGLIRNFLVDEVTQALRKASDATDVAYMRLLFASAASSPASSAIRPPPIPNDKMDVRQEDEEGREIITSSADALSPIEAVLVGRMRDAFLGYQAYYE-----------RERAAHEAQVLSLSAQLEALERENLREGLHGELGENSAGERKAMALKAAIEDSRARFATGMEALLNDFDAHAAAAVPPPSLLPATVTVIVASRGVRFDT-QLLPTHFPENVYDKVRSYYASTGDEVRGFGPGTRMHLQAL------SATRTCAGDSAQPPQTHPID----SLTQTVF-----SQSPGGRIGAGWAIVVDGA-VLLASEEVKPCFAREFGQPGKDIGETVDYFTCGECNLNW-----------LCAACATHCHRACRDVKPFSLNHRPTWACCYCKKK 1267
VD IL +CP+C + + + CGH+FC++C + ++R+H CP C++ + + RN+ ++ + Q L + Y L A +A+ D++D D + + SPIE V +RD+ LGYQ YYE + + +H +L+ LE++N+ E + + IE+ +F+ ++ L+ +D H + +P P LLP V + V S+G+R + + P ++ V Y GD V + R +Q + + D+ ID SL+Q V + I AG I + G VL S+++ C + KD T +YF+C CN N +C C CH+ + P LNHRPTWACCYC KK
Sbjct: 16 VDDILDKYDCPICMCKLLEPYIVKCGHTFCKNCILECVNRQHECPACRQKCT--KEDIFRNYSLEILLQKLSDEREKEQHLYFNNL--------AGNAV-------DQLDNHHGDGQLNK---------SPIETVFTMNLRDSLLGYQQYYELLLKEKDELVNKVKQSHSQDLLNAKLNENELEQQNIFELIDIQ--------------SKQIEN---KFSVAIDQLVQSYDEHMRSIIPQPKLLPIRVNIYVESKGLRVENVHVKPYENANDLLKLVEEYQKQRGDPVLNW---NREQVQIFVTGPLRADNQNINWDNLNGEAVKQIDLNSGSLSQHVLINYWATPFQTYNIAAGSTITIKGGPVLFESDKLLECMTLYYD---KDPNSTFNYFSCKTCNSNCKLLTFILKISGICENCKDGCHKG-HVLLPHLLNHRPTWACCYCMKK 415
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: A0A8B7Y4Z0_ACAPL (tripartite motif-containing protein 26-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y4Z0_ACAPL) HSP 1 Score: 132 bits (333), Expect = 3.600e-30 Identity = 104/429 (24.24%), Postives = 185/429 (43.12%), Query Frame = 2
Query: 35 VDSILAALNCPLCFEVVKDCVVTPCGHSFCRSCAGDAISRKHTCPVCQKAVIGGEAGLIRNFLVDE-VTQALRKASDATDVAYMRLLFASAASSPASSAIRPPPIPNDKMDVRQEDEEGREIITSSADALSPIEAVLVGRMRDAFLGYQAYYERERAAHEAQVLSLSAQLEALERENLREGLHGELGENSAGERKAMALKAAIEDSRARFATGMEALLNDFDAHAAAAVPPPSLLPATVTVIVASRGVRF-DTQLLPTHFPENVYDKVRSYYASTGDEVRGFGPGTRMHLQALSAT---RTCAGDSAQPPQTHPIDSLTQTVFSQSPGG-------RIGAGWAIVVDGAVLLASEEVKPCFAREFGQPGKDIGETVDYFTCGECNLNWLCAACATHCHRACRDVKPFSLNHRPTWACCYC-KKKRARIG 1282
V ++ CP+C E + +TPCGH +C C + ++R+ CP C V + L ++ D ++ + S A D +++L+ + + EG ++ SPI L ++ ++ YY+ + ++ ++ Q+EAL+ G++ ++ L+ + T + L++ +D + A +P PSLLP TV+V + + V D ++ P + D + + GD + F P ++ L R + + + P V P G + G +VV G + L SE K CFA+ F KD G+++DYFTC +C W+C +C CH+ + V P+ + H+PTWACCYC +KK+ ++G
Sbjct: 19 VKAVSEHFTCPICMERLSQTYITPCGHRYCGICIKECVNRRSKCPCCNTKVTADK--LYPDWAFDNLISMVSTEKSKAEDQYFVKLI----------------------QEAGHHEHEG-----ANHREESPIVGTLQKHLKTGLATHEQYYQDFKREFTQRIQEVNLQMEALQGG----------GDDVLLAQQLQELEVKKQTLHTELRTCTQLLVDAYDKYLADHLPTPSLLPVTVSVRLQGKNVSLPDIKIKPHSSISEIKDVIAMAMEARGDPIASF-PDDQVQFVLLGPVEKGREISAELLEELLQSPDSMERSEVIRLLPRGCHPLLEFGVKPGSEVVVAGPLKLESEMPKQCFAQTFV---KDKGQSMDYFTCKDCAFKWVCRSCKDFCHKDHQTV-PYIMGHQPTWACCYCPRKKKCQLG 403
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Match: UPI001454F3BA (uncharacterized protein LOC117295818 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001454F3BA) HSP 1 Score: 128 bits (321), Expect = 1.290e-28 Identity = 112/436 (25.69%), Postives = 187/436 (42.89%), Query Frame = 2
Query: 35 VDSILAALNCPLCFEVVKDCVVTPCGHSFCRSCAGDAISRKHTCPVCQKAVIGGEAGLIRNFLVDEVTQALRKASDATDVAYMRLLFASAASSPASSAIRPPPIPNDKMDVRQEDEEGREIITSSADALSPIEAVLVGRMRDAFLGYQAYYERERAAHEAQVLSLSAQLEALERENLREGLHGELGENSAGERKAMALKAAIEDSRARFATGMEALLNDFDAHAAAAVPPPSLLPATVTVIVASRGVRF-DTQLLPTHFPENVYDKVRSYYASTGDEVRG----------FGPGTRMHL------QALSATRTCAGDSAQ--PPQTHPIDSLTQTVFSQSPGGRIGAGWAIVVDGAVLLASEEVKPCFAREFGQPGKDIGETVDYFTCGECNLNWLCAACATHCHRACRDVKPFSLNHRPTWACCYC-KKKRARIG 1282
V ++ C +C + + + +TPCGH FC C + ++R+ CP C K V + L ++ D + + + + + Y L AA D RE+ SPIE L ++ ++ Y++ + +V ++ +Q+EAL+ GE E A + +K + A +T + L++ +D + +P PSLLP ++V + + + D +L P ++ + + S + GD V GP + + Q LS D+ + P HP+ F+ PG + V+ G V L SE K CFA F KD ++DYFTC +C NW+C C +CH+ + V P+ L H+PTWACCYC +KK+ ++G
Sbjct: 13 VKAVSEHFTCSVCMDKLNNTHITPCGHRFCGKCIKECVNRRSKCPNCNKKVSADK--LYSDWAFDNLIKMVSVEKNKAENNYFVNLIQEAAH-------------------HSGDTNHREV--------SPIEGTLQKHLKLGLAAHEQYFQEFKREFTQRVQTVESQIEALQ--------GGEDDETMATCLHELEVKR--QGLHAELSTCTQLLVDAYDRYLTDHLPTPSLLPVAISVRLQDKNIVLQDVKLKPHSSLSDIKEAIISKMEARGDPVISSLDDQVQYILLGPFEKGRVISNEFVQELSLAEAERSDAIRLLPVGCHPV-----LDFAVKPGSEV------VLVGPVKLESEMPKQCFASTFD---KDKRLSMDYFTCKDCAFNWVCQYCKDYCHKDHQTV-PYILGHQPTWACCYCPRKKKCQLG 394 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1110.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1110.8.1 >prot_A-nodosum_M_contig1110.8.1 ID=prot_A-nodosum_M_contig1110.8.1|Name=mRNA_A-nodosum_M_contig1110.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=438bp MERASFARVDSILAALNCPLCFEVVKDCVVTPCGHSFCRSCAGDAISRKHback to top mRNA from alignment at A-nodosum_M_contig1110:91564..99909+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1110.8.1 ID=mRNA_A-nodosum_M_contig1110.8.1|Name=mRNA_A-nodosum_M_contig1110.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8346bp|location=Sequence derived from alignment at A-nodosum_M_contig1110:91564..99909+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1110:91564..99909+ >mRNA_A-nodosum_M_contig1110.8.1 ID=mRNA_A-nodosum_M_contig1110.8.1|Name=mRNA_A-nodosum_M_contig1110.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1314bp|location=Sequence derived from alignment at A-nodosum_M_contig1110:91564..99909+ (Ascophyllum nodosum dioecious)back to top |