mRNA_A-nodosum_M_contig1101.16.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1101.16.1
Unique NamemRNA_A-nodosum_M_contig1101.16.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 1.780e-98
Identity = 180/239 (75.31%), Postives = 196/239 (82.01%), Query Frame = 1 
Query:    7 VQVAADLREHMEIVHTSEYPRFINSLLKCFVQLLKNKLQPQ-----INKFRHVILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQKNYRPQLESEVPRFLETVNNIYRNLAKSVVSIFGLEGIKTAQLVADMTARKHAQLAASPAPSSEMGGAAGA---EPSAIPLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEALRLQPQLPRSPDGRL 699
            +Q AADLRE MEIVHTSEYP FI+SLL+CFV+LL+++L PQ     INKFRHVILEILHRLPNNEVLKP+V++LLLLVM VVD+DNEDNAIQGL VVFDLQKNYRPQLESEVPRFL+ VNNIYR L +SV  IFG EGIKTAQ VA+MTARKHAQ AA+P               EP AIPLLRSK SFKVLTECPLIVMLLFQLYPKYIK NIPDLIPLMI+ALRL P L R  DG L
Sbjct:   19 LQAAADLRERMEIVHTSEYPSFISSLLRCFVELLRDRLTPQMVDNKINKFRHVILEILHRLPNNEVLKPHVQELLLLVMKVVDTDNEDNAIQGLRVVFDLQKNYRPQLESEVPRFLQMVNNIYRQLGRSVHQIFGPEGIKTAQQVAEMTARKHAQQAAAPXXXXXXXXXXXXXXXEPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVL 257
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BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: A0A7R9U8N6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8N6_9STRA)

HSP 1 Score: 174 bits (441), Expect = 5.190e-46
Identity = 110/251 (43.82%), Postives = 147/251 (58.57%), Query Frame = 1 
Query:    7 VQVAADLREHMEIVHTSEYPRFINSLLKCFVQLLKNKLQPQI-----NKFRHVILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQKNYRPQLESEVPRFLETVNNIYRNLAKSVVSIFGLEGIKTAQLVADMTARKHAQLAASPAPSSEMGGAAGAEPSAIPLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEALRLQPQLPRSPDGRLLACLRGRYKEMIACQ 744
            ++ A DLRE +EIVHT EY  F+ +L   F +LL+N+L+P++     N+FR +ILEILHRLPNN+VLKPYV D+ +L    +  DNEDNA   L ++FDL KNYR  L+S     L+ V  +Y  L ++V  +F              + +  A    + A +    GA G +      LRS  S KVL ECPLIVMLLFQLYP +I+ NI  L+PLM+ AL+L     R+P   L      RYKE +ACQ
Sbjct:   19 LKAATDLRERIEIVHTMEYSNFLKALFPAFRELLENRLKPRLVDDEQNRFRSLILEILHRLPNNDVLKPYVHDVTVLARTALKEDNEDNAHTCLKIIFDLHKNYRELLKSNAQPVLDIVATVYEQLPQNVQRLFA------------PSTQPGANQNGTDAGNGNGPGAGGQKT----FLRSIESCKVLIECPLIVMLLFQLYPAFIQSNIKHLLPLMVRALKL-----RAPPNAL-RMQETRYKEFVACQ 247
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BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: A0A835YM43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM43_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.010e-44
Identity = 113/254 (44.49%), Postives = 146/254 (57.48%), Query Frame = 1 
Query:   10 QVAADLREHMEIVHTSEYPRFINSLLKCFVQLLKNKLQPQI-----NKFRHVILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQK--NYRPQLESEVPRFLETVNNIYRNLAKSVVSIFGLEGIKTAQLVADMTARKHAQLAASPAPSSEMGGAAGAEPSAIPLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEALRLQPQ--LPRSPDGRLLACLRGRYKEMIACQ 744
            QV  +LRE +EIVHT E+  ++  L   F QLL+ +L PQ+     NK R V+ +IL+RLP++E L+PY   LL L M+++  +NEDNA+  +  VFDL K  N+RP LE EV  FL+ V   YRNL  SV  +FG EGI+ A   A  T          P        AA AEP  +PLL    SFKVL ECP+IVMLLFQLY KY+ +         I AL LQP   +P +P       L GR+KE++A Q
Sbjct:    8 QVVVELRERIEIVHTPEFLLWLQYLFPVFEQLLRQRLPPQMVDNQFNKIRAVLWDILNRLPHSETLQPYALQLLKLCMDMLKLENEDNAVICVRTVFDLHKARNFRPLLEPEVQPFLDLVLLFYRNLKASVAKVFGAEGIRQATAAA-ATXXXXXXXXXXPL-------AAAAEP--MPLLPCTDSFKVLVECPIIVMLLFQLYHKYVPQXXXXXXXXXISALGLQPPGGVPSNP------VLMGRFKELLAAQ 245
[Close]
BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: A0A2R6XKQ8_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XKQ8_MARPO)

HSP 1 Score: 164 bits (415), Expect = 1.620e-42
Identity = 100/222 (45.05%), Postives = 140/222 (63.06%), Query Frame = 1 
Query:   13 VAADLREHMEIVHTSEYPRFINSLLKCFVQLLKNKLQPQI-----NKFRHVILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQKNYRPQLESEVPRFLETVNNIYRNLAKSVVSIFGLEGIKTAQLVADMTARKHAQLAASPAPSSEMGGAAGAEPSAIPLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEALRL 663
            +A ++R+ +EIVHTSEY  F+ S    F QLL    +PQ+     +K R+V++EIL+RLP++EV++P V++LL L M+V+ SDNE+N +  L ++FDL KN+RP LE EV  FL+ V  IY+N  K+ VS F  +    AQL A      +     SP          G  P+   L  S  SFKV+TECPLIVM LFQLYP+Y++ NIP L+PLM+ A+ +
Sbjct:   27 LATEVRDSIEIVHTSEYLNFLKSYFSVFSQLLTQSTKPQVTDTYEHKLRNVVIEILNRLPHSEVIRPSVQELLKLSMHVLGSDNEENGLICLRIIFDLHKNFRPALEPEVQPFLDFVCKIYQNF-KTTVSYFFEDTAADAQLAASQHNMGYMGQQKSP----------GGGPAPGQLNPSTRSFKVVTECPLIVMFLFQLYPRYLQTNIPLLLPLMVNAISI 237
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BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: A0A388JY92_CHABU (Uncharacterized protein n=3 Tax=Chara braunii TaxID=69332 RepID=A0A388JY92_CHABU)

HSP 1 Score: 164 bits (415), Expect = 1.620e-42
Identity = 107/259 (41.31%), Postives = 148/259 (57.14%), Query Frame = 1 
Query:   10 QVAADLREHMEIVHTSEYPRFINSLLKCFVQLLKNKLQPQI-----NKFRHVILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQKNYRPQLESEVPRFLETVNNIYRNLAKSVVSIFGLEGIKTAQL-----VADMTARKHA----QLAASPAPSSEMGGAAGAEPSAIPLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEALRLQPQLPRSPDGRLLACLRGRYKEMIACQ 744
            Q+A ++R+ +EIVHTSEYP F+ S    F  LL+++ QP       +K R+V+LEILHRLP++EVL+PYV DLL L M+V+  DNE+N +  L ++ DL KN+R QLESEV  FL+ V  IY+N   +V   F  + +  AQ+        ++   H     Q+ AS        G +   P A  L  S  SFKV+ ECPLIVM LFQ Y  Y++ NIP L+P M+ A+ +       PD      L+  Y +M A Q
Sbjct:   26 QLATEVRDSIEIVHTSEYPNFLKSFFNVFYALLRHQTQPLYTETHEHKLRNVVLEILHRLPHSEVLRPYVGDLLKLSMHVLAHDNEENGLICLRIIMDLHKNFRSQLESEVQPFLDFVVKIYQNFKSTVAYFFEDQAVGDAQMGGGGQTQSLSGLSHGSRDTQMTAS--------GPSQRGPVAGQLNPSTRSFKVVNECPLIVMFLFQCYQAYMQPNIPKLLPSMVSAIAISGPTTVLPD------LKQTYSDMKAAQ 270
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BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: A0A8J2WWQ5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWQ5_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.010e-42
Identity = 114/265 (43.02%), Postives = 149/265 (56.23%), Query Frame = 1 
Query:    4 SVQVAADLREHMEIVHTSEYPRFINSLLKCFVQLLKNK--LQPQIN---KFRHVILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQKNYRPQLESEVPRFLETVNNIYRNLAKSVVSIF--GLEGIKTAQLVADMTARK--HAQLAAS-------PAPSSEMGGAAGAEPSA-IPLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEALRLQ-PQLPRSPDGRLLACLRGRYKEMIACQ 744
            +++ A D+RE +EIVHTSEY  F+  L   F  +L       P      +FRH++LEI++RLPNNEVL+PY  +LL +    +  D E+NA+  L ++FDL KN+RP LE EV  FL+ V  IYR L  S+   F   L   ++  + A     +  H Q   +       P  +  +  A  A+ +A I  L+   SFKVLTECPLIVMLLFQLYPKYI+ENIP L PLM+  L L  P L            R RYKE IACQ
Sbjct:   40 ALRCATDIRERIEIVHTSEYANFLRHLFPAFRTILLRSPATHPADGVDVRFRHLVLEIMNRLPNNEVLRPYAPELLRIATETLSRDTEENALTCLRIIFDLHKNFRPALEGEVQCFLDLVQRIYRLLPTSINKAFFISLPDQRSPAVTASGVFNRPGHLQKCEAFSVTRTIPEQTVTLESAPRAQSAAAISALQGLDSFKVLTECPLIVMLLFQLYPKYIQENIPLLTPLMMGGLALHAPILAHKLQ-------RNRYKEFIACQ 297
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BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: F0YHH3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHH3_AURAN)

HSP 1 Score: 160 bits (405), Expect = 3.570e-41
Identity = 115/309 (37.22%), Postives = 155/309 (50.16%), Query Frame = 1 
Query:    4 SVQVAADLREHMEIVHTSEYPRFINSLLKCFVQLLKN-------KLQPQINKFRHVILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQKNYRPQLESEVPRFLETVNNIYRNLAKSVVSIFGLEGIKTAQLVADMTARKHAQLAAS---PAP----------------------------------------SSEMGGAAGAEPSAI------------PLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEALRLQPQLPRSPDGRLLACLRGRYKEMIACQ 744
            +++ A D+RE +EIVHTSEY  F+  L   F  +L +       +      +FRHVILEIL+RLPNNEVL+PY  +LL +    +  D+E+NA+  L ++FDL KN+RP LE EV  FL+ V  IYR L  S+   F    ++ A L    +  +  Q+A S   P+P                                        SS++  + G  P  I             +L+   SFKVLTECPLIVMLLFQLYPKYI++NIP L PLM+  L L+  L            R RY+E +ACQ
Sbjct:  687 ALRCATDIRERIEIVHTSEYANFLRYLFPAFRNVLLHSSSATSARADETGTRFRHVILEILNRLPNNEVLRPYAPELLRVATETLSRDSEENALTCLRIIFDLHKNFRPALEGEVQSFLDLVQRIYRLLPTSINKAFAFS-LQPAHLSKPKSTSRRIQIAYSCPHPSPLGITSEVISISNQLPGTSVLHRQTPVMACDAYLNPTLRIPSSKLASSPGLMPEGIVSTGSARTSTIQSVLQGLDSFKVLTECPLIVMLLFQLYPKYIQDNIPLLTPLMMGGLALRAPLAA------YKLQRERYREFVACQ 988
[Close]
BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: A0A6H5KBR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR9_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 4.160e-41
Identity = 95/139 (68.35%), Postives = 100/139 (71.94%), Query Frame = 1 
Query:  346 VNNIYRNLAKSVVSIFGLEGIKTAQLVADMTARKHAQLAASPAPSSEMGGAAGA------EPSAIPLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEALRLQPQLPRSPDGRLLACLRGRYKEMIACQ 744
            VNNIYR L +SV  IFG EGIKTAQ VA+MTARKHAQ AA+                   EP AIPLLRSK SFKVLTECPLIVMLLFQLYPKYIK NIPDLIPLMI+ALRL P L +   G L  CLR RYKEMIACQ
Sbjct:    2 VNNIYRQLGRSVHHIFGPEGIKTAQQVAEMTARKHAQQAAAXXXXXXXXXXXXXXXXXXXEPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQQGGGGVLPVCLRARYKEMIACQ 140
[Close]
BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: A0A1X6P4I8_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4I8_PORUM)

HSP 1 Score: 160 bits (404), Expect = 4.180e-41
Identity = 96/251 (38.25%), Postives = 142/251 (56.57%), Query Frame = 1 
Query:   13 VAADLREHMEIVHTSEYPRFINSLLKCFVQLLKNKLQPQ-----INKFRHVILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQKNYRPQLESEVPRFLETVNNIYRNLAKSVVSIFGLEGIKTAQLVADMTARKHAQLAASPAPSSEMGGAAGAEPSAIPLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEALRLQ-PQLPRSPDGRLLACLRGRY-KEMIACQ 744
            +   +R+++E+V+T EY  F+   +     +L     PQ     ++K R+V+LE+L+RLP+ + L+PYV DLL L + ++ +DNE+NA+  L ++FDL KN+RP LE+ VP FL+ V  +YRN  ++V + F                          AP    GGA G  P    L+ S  SFKV+ ECPLIVM LFQLYPK+I ENIP L+PLM+ ++ +  P    +P  R+   +R R   + IA Q
Sbjct:   27 LVTSIRDNIEVVYTQEYNSFLTHFIPALKSVLTEVTVPQTVDNEVHKARNVVLEVLNRLPHIDALRPYVPDLLTLALRILVTDNEENAVTALRIIFDLHKNFRPHLEAHVPDFLQFVAELYRNFNRTVAAAF--------------------------AP--RQGGAPGGAPPPPELIASTHSFKVIIECPLIVMFLFQLYPKFIAENIPVLLPLMVASIEVPVPGAAVAPPQRMARAVRHRLLHDFIAAQ 249
[Close]
BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Match: A0A2K1J4Q0_PHYPA (Uncharacterized protein n=6 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J4Q0_PHYPA)

HSP 1 Score: 156 bits (395), Expect = 7.670e-40
Identity = 97/220 (44.09%), Postives = 134/220 (60.91%), Query Frame = 1 
Query:   13 VAADLREHMEIVHTSEYPRFINSLLKCFVQLLKNKLQPQI-----NKFRHVILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQKNYRPQLESEVPRFLETVNNIYRNLAKSVVSIFGLEGIKTAQLVADMTARKHAQLAASPAPSSEMGGAAGAEPSAIPLLRSKVSFKVLTECPLIVMLLFQLYPKYIKENIPDLIPLMIEAL 657
            +A ++R+ +EIVHTSEY  F+ S    F  LL    +PQ      +K R+V++EIL+RLP++EVL+ +V+DLL L M+V+  DNE+N +  L ++FDL KN+RP LE +V +FL+ V  IY+N   +V   F        QL A      H  L       S  GG     P +  L +S  SFKV+TECPLIVM LFQLYP+Y+  NIP L+PLM+ A+
Sbjct:   27 LATEVRDSIEIVHTSEYLNFLKSYFVVFSNLLTKITKPQATDNVEHKLRNVVIEILNRLPHSEVLRLFVQDLLKLSMHVLACDNEENGLICLRIIFDLHKNFRPALEPDVQQFLDFVREIYQNFRATVTYFFEESSAPDVQLAA-----AHHNLGYMGQMRSPAGG-----PMSGQLNQSTRSFKVVTECPLIVMFLFQLYPRYVPTNIPLLLPLMVSAI 236
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1101.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFI6_ECTSI1.780e-9875.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U8N6_9STRA5.190e-4643.82Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
A0A835YM43_9STRA1.010e-4444.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2R6XKQ8_MARPO1.620e-4245.05Uncharacterized protein n=3 Tax=Marchantia polymor... [more]
A0A388JY92_CHABU1.620e-4241.31Uncharacterized protein n=3 Tax=Chara braunii TaxI... [more]
A0A8J2WWQ5_9STRA3.010e-4243.02Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YHH3_AURAN3.570e-4137.22Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6H5KBR9_9PHAE4.160e-4168.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X6P4I8_PORUM4.180e-4138.25Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A2K1J4Q0_PHYPA7.670e-4044.09Uncharacterized protein n=6 Tax=Physcomitrium pate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1101contigA-nodosum_M_contig1101:201663..203309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LFI6
PFAMsFAT,FATC,PI3_PI4_kinase
Model size744
Max annot lvl2759|Eukaryota
KEGG koko:K08874
KEGG Pathwayko05166,map05166
Hectar predicted targeting categoryother localisation
GOsGO:0000123,GO:0000166,GO:0003674,GO:0003712,GO:0003824,GO:0004402,GO:0004672,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006473,GO:0006475,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008144,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010556,GO:0016043,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016773,GO:0017076,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0030554,GO:0031248,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034212,GO:0034641,GO:0035267,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140096,GO:0140110,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1903506,GO:1990234,GO:2001141
Exons3
Evalue2.92e-99
EggNOG OGsCOG5032@1|root,KOG0889@2759|Eukaryota
Descriptioninternal peptidyl-lysine acetylation
Cds size744
COG categoryBDLTU
BRITEko00000,ko00001,ko01001,ko03021,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866494.38894-CDS-A-nodosum_M_contig1101:201662..2017911680866494.38894-CDS-A-nodosum_M_contig1101:201662..201791Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1101 201663..201791 +
1680866494.400035-CDS-A-nodosum_M_contig1101:202194..2024071680866494.400035-CDS-A-nodosum_M_contig1101:202194..202407Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1101 202195..202407 +
1680866494.4087646-CDS-A-nodosum_M_contig1101:202907..2033091680866494.4087646-CDS-A-nodosum_M_contig1101:202907..203309Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1101 202908..203309 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1101.16.1prot_A-nodosum_M_contig1101.16.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1101 201663..203309 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1101.16.1

>prot_A-nodosum_M_contig1101.16.1 ID=prot_A-nodosum_M_contig1101.16.1|Name=mRNA_A-nodosum_M_contig1101.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=248bp
LSVQVAADLREHMEIVHTSEYPRFINSLLKCFVQLLKNKLQPQINKFRHV
ILEILHRLPNNEVLKPYVKDLLLLVMNVVDSDNEDNAIQGLCVVFDLQKN
YRPQLESEVPRFLETVNNIYRNLAKSVVSIFGLEGIKTAQLVADMTARKH
AQLAASPAPSSEMGGAAGAEPSAIPLLRSKVSFKVLTECPLIVMLLFQLY
PKYIKENIPDLIPLMIEALRLQPQLPRSPDGRLLACLRGRYKEMIACQ
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mRNA from alignment at A-nodosum_M_contig1101:201663..203309+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1101.16.1 ID=mRNA_A-nodosum_M_contig1101.16.1|Name=mRNA_A-nodosum_M_contig1101.16.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1647bp|location=Sequence derived from alignment at A-nodosum_M_contig1101:201663..203309+ (Ascophyllum nodosum dioecious)
TTATCTGTCCAGGTGGCGGCTGACCTGCGAGAGCATATGGAAATAGTGCA
CACCTCTGAGTACCCGAGGTTCATCAACTCCCTGCTCAAGTGCTTCGTGC
AGCTCCTGAAGAACAAACTCCAACCCCAGGTGCGTATTGAGTCTGGGAGG
GGGATTAGGGGAAACGGGAGTTTATTTTTTATTTGATTTTTTACGTCCTC
CGTACTGGACCATACAGCACTAGTGTTTTCGGGGTGCTGCAACCCATCGA
ACCGCCGCTTAGGTTTTGCTGAAACGCCTCTTTTATTGAGTACCCCGGAG
GTGAAGTGGGATGGGCATTAAGGCCGTGATCATCTCTCACGAACAGCACG
GAAACGGTGGGTAGGAGCGTGCTGGATTGAGGCCCGAAATACGCCCTATC
TCCGATCGACGGTCCCTTTGTTAGATATGTTCTCTCCCTTTTCTGCTCAA
AACCCTGCCGTGAAAAACGGACGAACAAACGAACGAACGCGCTTCGCTTC
ACGGCAGTAACAGATGGATGGTGGACAACAAGATCAACAAGTTCAGGCAC
GTGATCCTGGAGATCCTGCACAGGCTGCCCAACAACGAGGTTCTCAAGCC
TTACGTCAAGGACCTGCTACTCCTGGTGATGAACGTCGTGGATTCCGATA
ACGAGGACAACGCCATCCAGGGTCTGTGCGTCGTGTTCGATCTCCAAAAG
AACTACCGCCCGCAACTGGAGTCCGAGGTCCCCCGCTTCTTGGAGGTGTG
GAGGACCTTTGCGGCCGGGAATTCGTAGAGCGGAAGGCGTCAGCTGTTGT
TGATGCCCCCCCCCCCCATGCGGTGTCTAACTTACAACGAGTTGTTTCAC
AAAATATCTCAAAATATTTTCGCCTCGTGCTTACCCGTCGAGCGGCGTGA
ACCACGAGTGCTCGTTTTGCTAGCGTCGCGTGCGCAGCTCCTGAACTCGA
CCGCCCGCGCTGCTGTGTATGGAGTTCGGCGTGCTTTCCCTCGAAAATAC
CTGGTAGGAGTTACGCATTGAATGATTTGTACTTCAAAGTCCGACCAAGC
CTTAACGATTACATTACCTTGAACTCTCTGACTAAATTTACAAATGTTTG
CTCTTCAAACTTGGACGAACCATGAGCTTTTGCCCTTGCCCCCCCCCCCC
CCTTCCACTTTCCCCCCCCACCTCTCGCAACAAAAGCAACCTAACCAACC
AATCGCGAAACGGAACGGCTCGCGGTCATCGCGCGAGGGCGGAAGACGGT
AAACAACATCTACCGCAACCTAGCCAAGAGCGTGGTGTCGATTTTCGGGC
TGGAGGGCATCAAGACGGCACAACTCGTCGCCGACATGACCGCCAGAAAG
CACGCGCAGCTGGCGGCTTccCCGGCTCCGTCCTCCGAGATGGGCGGGGC
GGCGGGGGCGGAACCCTCGGCAATCCCGCTGCTCCGGAGCAAAGTCTCGT
TCAAGGTTCTGACCGAGTGCCCCCTGATCGTCATGCTCCTGTTCCAGCTA
TACCCCAAGTACATCAAGGAGAACATCCCGGACCTGATCCCGCTGATGAT
CGAGGCGCTGCGGCTCCAGCCGCAGCTGCCTCGATCGCCCGACGGGAGGC
TCCTCGCTTGCCTGAGGGGGCGTTACAAGGAAATGATTGCGTGCCAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1101:201663..203309+

>mRNA_A-nodosum_M_contig1101.16.1 ID=mRNA_A-nodosum_M_contig1101.16.1|Name=mRNA_A-nodosum_M_contig1101.16.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=744bp|location=Sequence derived from alignment at A-nodosum_M_contig1101:201663..203309+ (Ascophyllum nodosum dioecious)
TTATCTGTCCAGGTGGCGGCTGACCTGCGAGAGCATATGGAAATAGTGCA
CACCTCTGAGTACCCGAGGTTCATCAACTCCCTGCTCAAGTGCTTCGTGC
AGCTCCTGAAGAACAAACTCCAACCCCAGATCAACAAGTTCAGGCACGTG
ATCCTGGAGATCCTGCACAGGCTGCCCAACAACGAGGTTCTCAAGCCTTA
CGTCAAGGACCTGCTACTCCTGGTGATGAACGTCGTGGATTCCGATAACG
AGGACAACGCCATCCAGGGTCTGTGCGTCGTGTTCGATCTCCAAAAGAAC
TACCGCCCGCAACTGGAGTCCGAGGTCCCCCGCTTCTTGGAGACGGTAAA
CAACATCTACCGCAACCTAGCCAAGAGCGTGGTGTCGATTTTCGGGCTGG
AGGGCATCAAGACGGCACAACTCGTCGCCGACATGACCGCCAGAAAGCAC
GCGCAGCTGGCGGCTTccCCGGCTCCGTCCTCCGAGATGGGCGGGGCGGC
GGGGGCGGAACCCTCGGCAATCCCGCTGCTCCGGAGCAAAGTCTCGTTCA
AGGTTCTGACCGAGTGCCCCCTGATCGTCATGCTCCTGTTCCAGCTATAC
CCCAAGTACATCAAGGAGAACATCCCGGACCTGATCCCGCTGATGATCGA
GGCGCTGCGGCTCCAGCCGCAGCTGCCTCGATCGCCCGACGGGAGGCTCC
TCGCTTGCCTGAGGGGGCGTTACAAGGAAATGATTGCGTGCCAG
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