mRNA_A-nodosum_M_contig11.99.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: D7G4W1_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W1_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 8.780e-131 Identity = 189/248 (76.21%), Postives = 217/248 (87.50%), Query Frame = 3
Query: 453 QVQHVQIDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQDARNRTPIPVHVSRKTDRSVRRMFPYLIGREDDNGADGRVVAALKFDVFQDFKPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPPESIDFLREQGPVQLLVCDALMTTKKHQTHFSVEDGVALAGELKAQRTFLVGLGGSIEYHETNAMLESKEREE-GAPYVRLAYDGLAVDIDL 1193
QV+HVQID GKTWREG IRW+PR HG+ LDGIVLTHDHADA+LGLDDVRS+QD+R RTP PVHVS +TDRSVRR+FPYL+GREDDNGA GR VAAL F+VFQDF+PFEVGGL++TPFPV+HGEDY+SHGFLFGPEG++ICYISDVSRVPPES++FL + GP+QLLVCDALM +KKH+THF VED V LAG+LKA+RT LVGLG IEYH TNAML S+E EE G P+VRLAYDGLAVD+DL
Sbjct: 254 QVKHVQIDTGKTWREGAIRWFPR-------HGVRGLDGIVLTHDHADAMLGLDDVRSIQDSRKRTPTPVHVSERTDRSVRRVFPYLVGREDDNGAGGRFVAALNFNVFQDFQPFEVGGLEITPFPVMHGEDYVSHGFLFGPEGNKICYISDVSRVPPESMEFLEKHGPMQLLVCDALMVSKKHRTHFCVEDSVVLAGQLKARRTLLVGLGSDIEYHATNAMLASREEEELGMPHVRLAYDGLAVDVDL 494
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: A0A6H5JEM8_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM8_9PHAE) HSP 1 Score: 318 bits (815), Expect = 1.030e-99 Identity = 144/187 (77.01%), Postives = 167/187 (89.30%), Query Frame = 3
Query: 453 QVQHVQIDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQDARNRTPIPVHVSRKTDRSVRRMFPYLIGREDDNGADGRVVAALKFDVFQDFKPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPPESIDFLREQGPVQLLVCDALMTTKKHQTHF 1013
QV+HVQID GKTWREG IRW+PR HG+ LDGIVLTHDHADA+LGLDDVRS+QD+R RTP PVHVS +TDRSVRR+FPYL+GREDDNGA GR VAAL F+VFQDF+PFEVGGL++TPFPV+HGEDY+SHGFLFGPEG++ICYISDVSRVPPES++FL + GP+QLLVCDALM +KKH+THF
Sbjct: 193 QVKHVQIDTGKTWREGAIRWFPR-------HGVRGLDGIVLTHDHADAMLGLDDVRSIQDSRKRTPTPVHVSERTDRSVRRVFPYLVGREDDNGAGGRFVAALNFNVFQDFQPFEVGGLEITPFPVMHGEDYVSHGFLFGPEGNKICYISDVSRVPPESMEFLEKHGPMQLLVCDALMVSKKHRTHF 372
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: A0A835ZCK6_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK6_9STRA) HSP 1 Score: 200 bits (508), Expect = 6.630e-55 Identity = 109/196 (55.61%), Postives = 136/196 (69.39%), Query Frame = 3
Query: 471 IDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQDARNRTPIPVHVSRKTDRSVRRMFPYLIGREDDNGADG-RVVAALKFDVFQDFKPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPPESIDFLREQGPVQLLVCDALMTTKKHQTHFSVEDGVALAGELKA 1055
ID GKT+REGV+RWYPR DV TSLDGIVL+HDHADAILGLDDVR LQ++ + P PV V +T S++R+FPYL G NG G R VAAL F F +PF V GL + P PV+HGEDY+S+GF+FGP +R YISD SRVPP+++ LR + + LLV DAL+ + H THFS+ V LA +L+A
Sbjct: 23 IDTGKTFREGVLRWYPRHDV-------TSLDGIVLSHDHADAILGLDDVRGLQNSAD-PPTPVLVDSRTMHSLQRVFPYLCGT---NGKAGIRHVAALDFRTFTPHEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRER-IALLVVDALLKDRAHPTHFSMAQSVELARDLRA 206
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: A0A1J7G538_LUPAN (Lactamase_B domain-containing protein n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A1J7G538_LUPAN) HSP 1 Score: 188 bits (478), Expect = 7.320e-51 Identity = 104/251 (41.43%), Postives = 152/251 (60.56%), Query Frame = 3
Query: 462 HVQIDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQDARNRTPI---PVHVSRKTDRSVRRMFPYLIGREDDNGADGRVVAALKFDVFQDF--KPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPPESIDFLREQGPVQL--LVCDALMTTKKHQTHFSVEDGVALAGELKAQRTFLVGLGGSIEYHETNAMLESKEREEGAPYVRLAYDGLAVDIDL 1193
++ ID GK+++E V+RW+ VPH I +D I+LTH+HADA+LGLDDVRS+Q I P+++S+ + S+++ FPYL+ ++ G + R VA + +++ D +PF GLK TP PV+HGEDYI GFLFG E SR+ YISDVSR+P + + + G QL L+ D+L T H H + + L +RT L+G+ ++H N +L R EG P V+LA+DGL V I+L
Sbjct: 85 YILIDAGKSFKEAVLRWF-------VPHQIPRIDSIILTHEHADAVLGLDDVRSVQHFSPTNDINSTPIYLSQHSMNSIKQKFPYLVEKKRKEGQEIRWVAQMAWNIIADNFNQPFFASGLKFTPLPVMHGEDYICLGFLFG-EKSRVAYISDVSRIPVSTEYVISKSGAGQLDLLILDSLCRTGSHNFHLCLPQALETVKRLCPKRTLLIGMTHEFDHHRDNELLTEWSRREGIP-VQLAHDGLRVPINL 326
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: G7IP30_MEDTR (Metallo-hydrolase/oxidoreductase superfamily protein n=4 Tax=Trifolieae TaxID=163742 RepID=G7IP30_MEDTR) HSP 1 Score: 187 bits (475), Expect = 1.670e-50 Identity = 104/258 (40.31%), Postives = 153/258 (59.30%), Query Frame = 3
Query: 441 GRGRQVQHVQIDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQD---ARNRTPIPVHVSRKTDRSVRRMFPYLIGREDDNGADGRVVAALKFDVFQDF--KPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPPESIDFLREQGPVQL--LVCDALMTTKKHQTHFSVEDGVALAGELKAQRTFLVGLGGSIEYHETNAMLESKEREEGAPYVRLAYDGLAVDIDL 1193
G G ++ ID GKT+RE V+RW+ V H I +D I+LTH+HADA+LGLDDVR++Q + P P+++S+ + S+ FPYL+ ++ G + R VA + +++ D +PF GLK TP PV+HGEDYI GFLFG E SR+ YISDVSR+P + + + G QL L+ D+L T H H + + L ++T L+G+ ++H+ N L+ R EG P V+L++DGL V I+L
Sbjct: 72 GSGSNHNYILIDVGKTFRETVLRWF-------VHHRIPKIDSIILTHEHADAVLGLDDVRAVQPFSPTNDIDPTPIYLSQHSMDSIEEKFPYLVQKQRKEGQEIRRVAQMAWNIITDDCNQPFFASGLKFTPLPVMHGEDYICLGFLFG-EKSRVAYISDVSRIPASTEYVISKSGAGQLDLLILDSLYRTGSHNVHLCFPQTLEIVKRLCPKQTLLIGMTHEFDHHKDNEFLKEWSRREGIP-VQLSHDGLRVPINL 320
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: A0A0A0LVQ4_CUCSA (Lactamase_B domain-containing protein n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0LVQ4_CUCSA) HSP 1 Score: 186 bits (471), Expect = 6.940e-50 Identity = 101/251 (40.24%), Postives = 147/251 (58.57%), Query Frame = 3
Query: 462 HVQIDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQD---ARNRTPIPVHVSRKTDRSVRRMFPYLIGREDDNGADGRVVAALKFDVFQDF--KPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPP--ESIDFLREQGPVQLLVCDALMTTKKHQTHFSVEDGVALAGELKAQRTFLVGLGGSIEYHETNAMLESKEREEGAPYVRLAYDGLAVDIDL 1193
++ ID GKT+RE V+RW+ H I +D I+LTH+HADAILGLDD+R++Q + P P+++S+ + S+ FPYL+ ++ G + R VA L + + ++ KPF GL+ P PV+HGEDYI GFLFG E R+ YISDVSR+PP E + + G V LL+ D L H THF + +L +R L+G+ ++H+ N L + EG P V+LA+DGL + +DL
Sbjct: 83 YILIDVGKTFREQVLRWFTH-------HRIPKVDSIILTHEHADAILGLDDIRAVQPFNAVNDIDPTPIYLSQHSMESISVKFPYLVQKKLKEGQEVRRVAQLDWKIIENHHEKPFVASGLRFIPLPVMHGEDYICLGFLFG-ENYRVAYISDVSRIPPSTEHVISINGAGQVDLLILDTLYKNGSHNTHFCFPQTLDAVKKLNPKRAMLIGMTHEFDHHKDNEFLLDWSKREGIP-VQLAHDGLRIPVDL 324
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: A0A8B8KI03_ABRPR (putative hydrolase C777.06c n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KI03_ABRPR) HSP 1 Score: 184 bits (468), Expect = 1.200e-49 Identity = 105/252 (41.67%), Postives = 151/252 (59.92%), Query Frame = 3
Query: 459 QHVQIDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQDARNRT---PIPVHVSRKTDRSVRRMFPYLIGREDDNGADGRVVAALKFDVFQDF--KPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPPESIDFLREQGPVQL--LVCDALMTTKKHQTHFSVEDGVALAGELKAQRTFLVGLGGSIEYHETNAMLESKEREEGAPYVRLAYDGLAVDIDL 1193
++V ID GKT+RE V+RW+ V H I +D IVLTH+HADA+LGLDD+RS+Q + + P PV++S+ + S+ + FPY + ++ G + R V +++ D +PF GLK+ P PV+HGEDYI GFLFG E +R+ YISDVSR+P + + + G QL L+ DAL T H HF + + L +RT L+G+ I++H+ N L R EG V+LA+DGL V I+L
Sbjct: 66 KYVLIDAGKTFRETVLRWF-------VFHHIPRIDSIVLTHEHADAVLGLDDMRSVQPSSHTNDIDPTPVYLSQHSMDSMEKRFPYFVQKKHKEGQEIRRVPQFCWNIIADDCNQPFFASGLKLIPLPVMHGEDYICLGFLFG-EKNRVAYISDVSRIPASTEYVISKSGAGQLDLLILDALRKTGSHNVHFCLPQALEAVKRLCPKRTLLIGMNHEIDHHKDNEFLREWSRREGLS-VQLAHDGLRVPINL 308
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: A0A6J1CXF2_MOMCH (putative hydrolase C777.06c n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CXF2_MOMCH) HSP 1 Score: 185 bits (469), Expect = 2.410e-49 Identity = 100/252 (39.68%), Postives = 147/252 (58.33%), Query Frame = 3
Query: 459 QHVQIDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQ---DARNRTPIPVHVSRKTDRSVRRMFPYLIGREDDNGADGRVVAALKFDVFQDF--KPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPPESIDFLREQGPVQL--LVCDALMTTKKHQTHFSVEDGVALAGELKAQRTFLVGLGGSIEYHETNAMLESKEREEGAPYVRLAYDGLAVDIDL 1193
+++ ID GKT+RE V+RW+ R H +T +D I+LTH+HADA+LGLDD+R +Q P PV++++ T +SV FP L+ + G + R VA L + + +D KPF GL+ P PV+HGEDY+ GFLFG E ++ Y+SDVSR PP + + + G QL L+ DAL T H HF + + + ++ L+G+G +H N +L + EG P V+LA+DGL + IDL
Sbjct: 104 KYILIDVGKTFREQVLRWFTR-------HEVTRVDSIILTHEHADAVLGLDDIRDVQPFSSTNEINPTPVYLTQDTMKSVAMRFPNLVNKGLREGQEVRRVAQLDWKIIEDSYEKPFIASGLQFIPLPVMHGEDYVCVGFLFG-EKCKVAYVSDVSRFPPSTEQVISKSGAGQLDLLILDALRRTGSHNVHFCLPQTLEAVKRICPKQAMLIGMGHEFNHHLDNELLNEWSKREGIP-VQLAHDGLKIPIDL 346
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: V4MQ82_EUTSA (Lactamase_B domain-containing protein n=14 Tax=Brassicaceae TaxID=3700 RepID=V4MQ82_EUTSA) HSP 1 Score: 184 bits (467), Expect = 2.580e-49 Identity = 106/252 (42.06%), Postives = 146/252 (57.94%), Query Frame = 3
Query: 459 QHVQIDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQD---ARNRTPIPVHVSRKTDRSVRRMFPYLIGREDDNGADGRVVAALKFDVFQDF--KPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPPESIDFLREQGPVQL--LVCDALMTTKKHQTHFSVEDGVALAGELKAQRTFLVGLGGSIEYHETNAMLESKEREEGAPYVRLAYDGLAVDIDL 1193
+++QID GKT+RE V+RW+ H I +D I+LTH+HADA+LGLDD+RS+Q + P P+ VS+ S+ FPYL+ ++ G + R VA L + V ++ KPF L TP PV+HGEDY+ GFLFG E SR+ YISDVSR PP + + + G QL L+ D L T H TH + L +R L+G+ ++H+ N LE + EG P V+LA+DGL V IDL
Sbjct: 82 KYIQIDVGKTFREQVLRWFTL-------HKIPRVDSIILTHEHADAVLGLDDIRSVQPFSPTNDIDPTPIFVSQYAMDSLAVKFPYLVQKKLKEGQEVRRVAQLDWRVIEEDCEKPFVASDLSFTPLPVMHGEDYVCLGFLFG-EKSRVAYISDVSRFPPNTEYVISKSGGGQLDLLILDTLYKTGSHNTHLCFPQTLDTIKRLSPKRALLIGMTHEFDHHKDNEFLEEWSKREGIP-VKLAHDGLRVPIDL 324
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Match: A0A1S2XA09_CICAR (putative hydrolase C777.06c n=2 Tax=NPAAA clade TaxID=2231382 RepID=A0A1S2XA09_CICAR) HSP 1 Score: 183 bits (465), Expect = 4.470e-49 Identity = 101/251 (40.24%), Postives = 150/251 (59.76%), Query Frame = 3
Query: 462 HVQIDPGKTWREGVIRWYPRQDVFLVPHGITSLDGIVLTHDHADAILGLDDVRSLQD---ARNRTPIPVHVSRKTDRSVRRMFPYLIGREDDNGADGRVVAALKFDVFQDF--KPFEVGGLKVTPFPVLHGEDYISHGFLFGPEGSRICYISDVSRVPPESIDFLREQGPVQL--LVCDALMTTKKHQTHFSVEDGVALAGELKAQRTFLVGLGGSIEYHETNAMLESKEREEGAPYVRLAYDGLAVDIDL 1193
++ ID GKT+RE V+RW+ V H I +D I+LTH+HADA+LGLDD+R++Q + P P+++S+ + S+ FPYL+ ++ G + R VA + +++ +D +PF GLK TP PV+HGEDYI GFLFG E SR+ YISDVSR+P + + + G QL L+ D+L T H H + L ++T L+G+ ++H+ N L R EG P V+L++DGL V I+L
Sbjct: 79 YILIDVGKTFRETVLRWF-------VSHRIPRIDSIILTHEHADAVLGLDDIRAVQPFSPTNDIDPTPIYLSQHSMDSIEEKFPYLVQKKRKEGQEIRRVAQIAWNIIRDDCNQPFFASGLKFTPLPVMHGEDYICLGFLFG-EKSRVAYISDVSRIPASTEYVISKSGAGQLDLLILDSLYRTGSHNVHLCFPQTLETVKRLCPKKTLLIGMTHEFDHHKDNEFLAEWSRREGIP-VQLSHDGLRVPINL 320 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.99.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11.99.1 >prot_A-nodosum_M_contig11.99.1 ID=prot_A-nodosum_M_contig11.99.1|Name=mRNA_A-nodosum_M_contig11.99.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=168bp MFPYLIGREDDNGADGRVVAALKFDVFQDFKPFEVGGLKVTPFPVLHGEDback to top mRNA from alignment at A-nodosum_M_contig11:1297897..1302526- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11.99.1 ID=mRNA_A-nodosum_M_contig11.99.1|Name=mRNA_A-nodosum_M_contig11.99.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4630bp|location=Sequence derived from alignment at A-nodosum_M_contig11:1297897..1302526- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11:1297897..1302526- >mRNA_A-nodosum_M_contig11.99.1 ID=mRNA_A-nodosum_M_contig11.99.1|Name=mRNA_A-nodosum_M_contig11.99.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at A-nodosum_M_contig11:1297897..1302526- (Ascophyllum nodosum dioecious)back to top |