mRNA_A-nodosum_M_contig11.77.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: D7G4U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U7_ECTSI) HSP 1 Score: 342 bits (876), Expect = 2.250e-108 Identity = 152/224 (67.86%), Postives = 189/224 (84.38%), Query Frame = 1
Query: 451 SMLPLSSADVAKFEEDGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWKQFGCGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVLLPADGKDVIETAGSAGDVMLTHPLLLHAR 1122
S +PLS D+ FEE+G+VML+ AFD +VA+ACR+ LW+RL+G+G+ + ATWV+K I E YG+ S KK+RGHPWK ALSP+LK+AVNQL G DSW++FGCGWWMVTFPGFA+ PW A+G WH+DGAHFRHYPHSRE+G++PIFL SD+ GGGTA+LRGSHKK+A+ILW+++GTTGLTGPELSSAAR+ LLPA DV+ET G AGDV+LTHPLLLH+R
Sbjct: 32 SEVPLSPEDIRSFEENGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWDRAGTTGLTGPELSSAAREALLPAADDDVVETNGDAGDVLLTHPLLLHSR 255
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: A0A835YWK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK8_9STRA) HSP 1 Score: 246 bits (629), Expect = 2.240e-71 Identity = 126/259 (48.65%), Postives = 162/259 (62.55%), Query Frame = 1
Query: 496 DGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWKQFGCGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVLLPADGK---DVIETAGSAGDVMLTHPLLLHARSTNLAPVETRGVRFMCHPSVQLKRHFDFK-ADPDTFSPVQRVVWQSR 1260
DG+V+LRGAF + A+ACR + RLR +G+ + +TWV++ I E YG ++ G PW +PRL AA++QLLGA +W+ FG GWW TFPG + PW A G WHVDGAH P S E L+ I +LSD+ +GGGTAL GSH+K A +LW G GL GP LS A L+ +G V+ET G AGDVML HPLLLHARS NLAP VR MC+P+V L+ + P SPV+RV+WQ++
Sbjct: 10 DGFVLLRGAFPRDAAAACRAAISDRLRQDGIAFDDPSTWVERHSIPELYG------RELGPPWSLVYTPRLAAALDQLLGAGAWRDFGLGWWFFTFPGVSAPPWGAAGHWHVDGAHLNRTPASPEGALILIVMLSDVAERGGGTALAVGSHRKAARLLWAHGGEGGLRGPRLSRLALAELMDEEGALRCPVVETRGKAGDVMLLHPLLLHARSKNLAP----SVRVMCNPAVSLRAPMALRPGSPHAMSPVERVIWQAQ 258
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: F0XZZ7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZZ7_AURAN) HSP 1 Score: 249 bits (637), Expect = 6.690e-66 Identity = 134/274 (48.91%), Postives = 169/274 (61.68%), Query Frame = 1
Query: 460 PLSSADVAKFEEDGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWKQ---FGCGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVL--LPADGKDVIETAGSAGDVMLTHPLLLHARSTNLAPVETRGVRFMCHPSVQLKRHFDFKADPDTFSPVQRVVWQSRPA 1266
PLS+ D+A+F DGY +L GAF +VA CRD LWRR+ G+ + ATW P G + G PW S RL+AA++QL GA W GCGWW+VTFPG A APW A+G+WHVDG + H SRE+G++PIFL SD+ +GGGTAL GSH+ +AE+LW ++G G+ GP LS+ AR+ L G V+ET G AGDVMLTHP LLHARS NL V+ VRFMCHP+V+L D SPV+ V +R A
Sbjct: 564 PLSADDLAQFVRDGYCLLPGAFPRDVAFDCRDALWRRVGDLGIAADDPATWSLA-PKGRLGLQDVFRESDLGAPWAECWSDRLRAALDQLCGAGRWVDDDALGCGWWVVTFPGVANAPWGAEGSWHVDGHGYAHRVDSREIGVLPIFLFSDVAARGGGTALAPGSHRAVAELLW-RAGAEGVPGPRLSALAREALGAEALAGDAVVETRGRAGDVMLTHPFLLHARSKNLRDVDAAAVRFMCHPAVRLAAPMRVADDGGAPSPVEAPVRAARRA 835
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: A0A3M6VBK7_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBK7_9STRA) HSP 1 Score: 226 bits (576), Expect = 3.070e-64 Identity = 119/264 (45.08%), Postives = 157/264 (59.47%), Query Frame = 1
Query: 457 LPLSSADVAKFEEDGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWKQFGCGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVLLPADGKDVIETAGSAGDVMLTHPLLLHARSTNLAPVETRGVRFMCHPSVQLKRHFDFKADPDTFSPVQRVV 1248
P + F DG+V+L AF A CR+ +W+RL +G+ ++S+TWV E +G+P K WK ++PRLK AV+QL G + WK FG GWW++TFPG AE PW A G WHVDGA ++H+ S+E GL+ IFL SDI P GGTAL GSHK+IA +L ++ G+ G +S AR ++V+E G AGDVML HP LLHARS NL VR MC+P+VQL R + FSPV++ V
Sbjct: 23 FPFDHQAIEAFIRDGFVLLSKAFSTSTAQKCREVIWQRLAQDGIT-KDSSTWV------ERHGIPELYTAKDDIVWKDVVTPRLKQAVDQLCGINKWKDFGLGWWIITFPGQAEPPWEAAGKWHVDGATYQHHVDSQESGLLAIFLFSDIGPGEGGTALSVGSHKRIARML-KKNEPRGMKGGAVSYQARQF----QRREVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVESVRIMCNPNVQLHRKMNLNRADGDFSPVEQAV 274
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: A0A1W0A887_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A887_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.890e-63 Identity = 117/267 (43.82%), Postives = 166/267 (62.17%), Query Frame = 1
Query: 457 LPLSSADVAKFEEDGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWK--QFGCGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVLLPADGKDVIETAGSAGDVMLTHPLLLHARSTNLAPVETRGVRFMCHPSVQLKRHFDF-KADPDTFSPVQRVV 1248
+ L +V F E GYV+L+ AF E A+ACR+ LW RL +G+ +S TW +K I E+Y K G PW ++PRLK A++QL G + WK + CGWW++TFPG A PW G WHVDG+ + H+ S+E GL+PIFL +DI P GGTA+ GSH +A+IL +++ G+ G ++S+ A+ +L + K ++ET G AGDVMLTHP L+HARS N VRFMC+P+V LK + + D +SPV++ +
Sbjct: 7 IGLLPEEVDFFIEHGYVLLKKAFSTETAAACREFLWERLEKDGLNRHDSLTWPEKHWISESYD------KNTGDPWTNVITPRLKRAMDQLCGVERWKTEELTCGWWVITFPGHAMHPWAPAGHWHVDGSRYIHHIDSKESGLLPIFLFNDINPGDGGTAISPGSHHHVAQIL-HKAAHNGMKGGKVSATAKAWVLK-NKKSIVETQGKAGDVMLTHPFLMHARSKNCG----HEVRFMCNPNVGLKNPMNLNREDASEYSPVEKAI 261
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: K3W8D1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8D1_GLOUD) HSP 1 Score: 224 bits (571), Expect = 2.290e-63 Identity = 113/263 (42.97%), Postives = 158/263 (60.08%), Query Frame = 1
Query: 460 PLSSADVAKFEEDGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWKQFGCGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVLLPADGKDVIETAGSAGDVMLTHPLLLHARSTNLAPVETRGVRFMCHPSVQLKRHFDFKADPDTFSPVQRVV 1248
PL++ ++ F DG+V+L+ AF A+ CR+ +WRRL +G+ +S+TWV E +G+P W L+PRL AV+QL G SW++FGCGWWM+TFP A+ PW A G WHVDGA ++H+ S+E GL+ IF SD+ P GGTAL GSH IA++L ++ GL G +S AR + V+E G AGDVML HP LLHARS NL VR MC+P+++L + + D ++PV+R +
Sbjct: 43 PLAAREIDAFVRDGFVLLKDAFSEATAAKCRELVWRRLEKDGIRKSDSSTWV------ERHGIPEIYNGDDDPLWNDVLTPRLHRAVDQLCGQGSWEEFGCGWWMITFPNQADPPWEAAGKWHVDGASYQHHLDSKESGLLAIFCFSDVGPTEGGTALSVGSHVPIAQLL-EKNQPRGLKGGAVSYNARKF----PRRRVVEVNGKAGDVMLVHPFLLHARSKNLGTRGVDSVRIMCNPNIRLHKKMNLDRADDAYTPVERAI 294
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: A0A329S5P2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S5P2_9STRA) HSP 1 Score: 223 bits (567), Expect = 5.900e-63 Identity = 116/263 (44.11%), Postives = 159/263 (60.46%), Query Frame = 1
Query: 460 PLSSADVAKFEEDGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWKQFGCGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVLLPADGKDVIETAGSAGDVMLTHPLLLHARSTNLAPVETRGVRFMCHPSVQLKRHFDFKADPDTFSPVQRVV 1248
PL + F DG+V+LRGAF + A CRD +W RL +G+ ++S+TWV++ I E Y + + W ++PRLK A++Q+ G D W+ FG GWWM+TFP AE PW A G WHVDGA ++H+ S+E GL+ IFL SDI P GGTAL GSHK IA +L ++ G+ G +S AR ++V E G AGDVML HP LLHARS NL VR MC+P+V+L++ + D +SPV++ +
Sbjct: 24 PLDKQAIDSFIHDGFVLLRGAFSSSTAQKCRDLIWTRLAQDGIT-KDSSTWVERHGIPELYTV------EDDPVWGDVVTPRLKRAMDQICGKDRWEDFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDSKESGLLVIFLFSDIGPGEGGTALSVGSHKWIAGLL-EKNEPRGMKGGAVSYQARQF----QRREVAEVNGKAGDVMLVHPFLLHARSKNLGQKGAESVRIMCNPNVRLRQKMNLNLADDAYSPVEQAI 274
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: D0NBH9_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NBH9_PHYIT) HSP 1 Score: 222 bits (565), Expect = 1.040e-62 Identity = 117/263 (44.49%), Postives = 158/263 (60.08%), Query Frame = 1
Query: 460 PLSSADVAKFEEDGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWKQFGCGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVLLPADGKDVIETAGSAGDVMLTHPLLLHARSTNLAPVETRGVRFMCHPSVQLKRHFDFKADPDTFSPVQRVV 1248
PL F +G+V+LRGAF A CRD +W+RL +G+ ++S+TWV E +G+P + W ++PRL+ A++QL G D W+ FG GWWM+TFP AE PW A G WHVDGA ++H+ S+E GL+ IFL SDI P GGTAL GSHK IA +L ++ +G+ G +S AR P +V+E G AGDVML HP LLHARS NL VR MC+P+V+L+R K +SPV++ +
Sbjct: 24 PLDHEATRSFTRNGFVLLRGAFATSTAEKCRDLIWKRLAQDGIT-KDSSTWV------ERHGIPELFTAEDDPVWGEVVTPRLQRAMDQLCGKDRWEGFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDSKESGLLVIFLFSDIGPGEGGTALSVGSHKWIARLL-EKNEPSGMKGGAVSYQARQFRRP----EVVEVNGKAGDVMLVHPFLLHARSKNLGRKGVDSVRIMCNPNVRLRRKMKLKRPDGDYSPVEQAI 274
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: A0A6G0W9P8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9P8_9STRA) HSP 1 Score: 221 bits (564), Expect = 1.440e-62 Identity = 118/268 (44.03%), Postives = 161/268 (60.07%), Query Frame = 1
Query: 463 LSSADVAKFEEDGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWKQFG--CGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVLLPADGKDVIETAGSAGDVMLTHPLLLHARSTNLAPVETRGVRFMCHPSVQLKRHFDFKAD-PDTFSPVQRVVWQS 1257
L+ +V F + GYV+LR AF + A+ACR+ LW R+ +GV + +TW +K I E+Y G PW L+PRLK+A++QL G D W + CGWW++TFPG A PW G WHVDGAH+ H S+E GL+PIF+ SDI P GGTAL GSH +A IL + GL G ++S++A+ + K +E G AGD+MLTHP L+HARS N VRFMC+P+V LK F+ D P +SPV+ + ++
Sbjct: 13 LTPEEVDHFIKHGYVLLRNAFSTDTAAACREFLWARIEQDGVKQDDCSTWPEKHWISESYS------DATGEPWTEVLTPRLKSAMDQLCGKDRWNESDLVCGWWVITFPGHAMLPWGPAGHWHVDGAHYIHKLDSKESGLLPIFIFSDINPGDGGTALAPGSHMHVAHILQDAIPHGGLKGGKVSASAKSWVYQHK-KAWVEVQGRAGDIMLTHPFLMHARSKNCGS----QVRFMCNPNVGLKDPMQFERDDPADYSPVEAAIVEA 269
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Match: A0A662YJD1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJD1_9STRA) HSP 1 Score: 221 bits (562), Expect = 6.670e-62 Identity = 114/263 (43.35%), Postives = 154/263 (58.56%), Query Frame = 1
Query: 460 PLSSADVAKFEEDGYVMLRGAFDAEVASACRDQLWRRLRGEGVMMQNSATWVKKKPIGETYGLPWSSKKKRGHPWKTALSPRLKAAVNQLLGADSWKQFGCGWWMVTFPGFAEAPWRADGTWHVDGAHFRHYPHSREVGLVPIFLLSDIFPQGGGTALLRGSHKKIAEILWNQSGTTGLTGPELSSAARDVLLPADGKDVIETAGSAGDVMLTHPLLLHARSTNLAPVETRGVRFMCHPSVQLKRHFDFKADPDTFSPVQRVV 1248
PL + +A F+ DG+V+L AF A CR +W RL +G+ + +TWV E +G+P + W L+PRLK A++QL G D W+ FGCGWWM+TFP AE PW A G WHVDGA ++H+ S+E GL+ +FL SDI P GGTAL GSHK IA +L ++ G+ G +S AR + V+E G AGDVML HP LLHARS NL VR MC+P+V+L + + +SPV++ +
Sbjct: 49 PLDANAIASFQRDGFVLLSRAFPESTAQQCRALIWERLVQDGIEKSDPSTWV------ERHGIPEIYTAEDAPVWDGVLTPRLKQAMDQLCGRDRWEDFGCGWWMITFPDQAEPPWEAAGKWHVDGAAYQHHLDSKESGLLAVFLFSDIAPGEGGTALSVGSHKWIARLL-EKNEPRGMKGGAVSFQARKFRR----EQVVEVNGKAGDVMLVHPFLLHARSKNLGQKGADSVRMMCNPNVRLHQKMNLNRPDGAYSPVEQAI 300 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11.77.1 >prot_A-nodosum_M_contig11.77.1 ID=prot_A-nodosum_M_contig11.77.1|Name=mRNA_A-nodosum_M_contig11.77.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=477bp MEIASTVTHLAPGRTSTHDCDQDDAQPPPSKKAKLGDTRTSEGGRSWTCEback to top mRNA from alignment at A-nodosum_M_contig11:1027848..1037173- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11.77.1 ID=mRNA_A-nodosum_M_contig11.77.1|Name=mRNA_A-nodosum_M_contig11.77.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9326bp|location=Sequence derived from alignment at A-nodosum_M_contig11:1027848..1037173- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11:1027848..1037173- >mRNA_A-nodosum_M_contig11.77.1 ID=mRNA_A-nodosum_M_contig11.77.1|Name=mRNA_A-nodosum_M_contig11.77.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1431bp|location=Sequence derived from alignment at A-nodosum_M_contig11:1027848..1037173- (Ascophyllum nodosum dioecious)back to top |