mRNA_A-nodosum_M_contig11.55.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig11.55.1
Unique NamemRNA_A-nodosum_M_contig11.55.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: D8LIA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA1_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 3.390e-136
Identity = 234/343 (68.22%), Postives = 271/343 (79.01%), Query Frame = 1
Query:   34 QLDLRSLAQVLSAKMMKMLRDGSVSCTAVLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNV---ARRKRLSLRF-----CQRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRKLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSS-GVEG--KTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNG 1029
            +LDL +L + LSAKM+ M RDG  SC AVL GCLE++RDL+EIEGPDGT L G ELGQD +G +F GFLFTMPEQRG G + ++ PVC + +TRRAA+N +ASAARKSPKAMS+L DNV     R   SLR      C   AK P+SGGFVGLK+QG TCYMN++LQQLFM P  R+ IL AK+PRR L+DFPRELVGRRV++  E GGS+EA V +YNE++G+H IRYD+K+E   RLG GGGRPGKETGAVS+VW D  SS G EG  KTMT DEA  QVLEQVQRTFLHLRDG+RRFFDPIRLV+ACRCLNL Y V+ QNDASEFCDKLLDRVESGMK G
Sbjct: 1065 ELDLGALGRALSAKMVSMPRDGHGSCKAVLQGCLELLRDLVEIEGPDGTFLKGAELGQDFVGKIFKGFLFTMPEQRGRG-MRVERPVCADPATRRAALNALASAARKSPKAMSALLDNVDVFVGRVLPSLRHRWGYECSFDAKRPQSGGFVGLKNQGCTCYMNSLLQQLFMVPALRKGILEAKLPRRNLQDFPRELVGRRVAVQWETGGSVEAYVHSYNERSGEHVIRYDAKDEVTFRLGPGGGRPGKETGAVSLVWGDSPSSRGGEGMGKTMTPDEATAQVLEQVQRTFLHLRDGERRFFDPIRLVEACRCLNLEYLVHQQNDASEFCDKLLDRVESGMKAG 1406          
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 2.060e-134
Identity = 232/342 (67.84%), Postives = 269/342 (78.65%), Query Frame = 1
Query:   37 LDLRSLAQVLSAKMMKMLRDGSVSCTAVLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNV---ARRKRLSLRF-----CQRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRKLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSS-GVEG--KTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNG 1029
            LDL +L + LSAKM+ M RDG  SC AVL GCLE++RDL+EIEGPDGT L G ELGQD +G +F GFLFTMPEQRG G + ++ PVC + +TRRAA+N +ASAARKSPKAMS+L DNV     R   SLR      C   AK P+SGGFVGLK+QG TCYMN++LQQLFM P  R+ IL AK+PRR L+DFP ELVGRRV++  E GGS+EA V +YNE+TG+H IRYD+K+E   RLG GGGRPGKETGAVS+VW D  SS G EG  KTMT DEA  QVLE+VQRTFLHLRDG+RRFFDPIRLV+ACRCLNL Y V+ QNDASEFCDKLLDR+ESGMK G
Sbjct: 1870 LDLGALGRALSAKMVSMPRDGHGSCKAVLQGCLELLRDLVEIEGPDGTFLKGAELGQDFVGKIFKGFLFTMPEQRGRG-MRVERPVCADPATRRAALNALASAARKSPKAMSALLDNVDVFVGRVIPSLRHRWGYECSFDAKRPQSGGFVGLKNQGCTCYMNSLLQQLFMVPALRKCILEAKLPRRNLQDFPLELVGRRVAVQWETGGSVEAYVHSYNERTGEHVIRYDAKDEVTFRLGPGGGRPGKETGAVSLVWGDSPSSRGGEGMGKTMTPDEATAQVLEEVQRTFLHLRDGERRFFDPIRLVEACRCLNLEYLVHQQNDASEFCDKLLDRLESGMKAG 2210          
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A836CEK4_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEK4_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.380e-52
Identity = 150/395 (37.97%), Postives = 203/395 (51.39%), Query Frame = 1
Query:   43 LRSLAQVLSAKMMKMLR----------------DGSVSCTAVLLGCLEVVRDLIEIEGPDGTL-LDGTELGQDLMGSMFNGFLFTMPEQRGAG--GISLKHPVCTELSTRRAAMNVM-ASAARKSPKAMSSLT---DNVARRKRLSLRFCQRHAKPPESG-----GFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAK-MPR---RKLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRY------------------DSKEEFCLRLGEG--------GGRPGKETGAV----------SIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMK 1023
            L++L Q LS K+M + R                DG  S T VL  CL ++  L++   P+G + L GTELG++L+G +F   LF +P+         +  HP+C     R AA  V+ A+A R +  A+  L     N+       LR C  H +    G     G+VGLK+QG TCYMN++LQQLFM P FR+AI SA  MPR     L + P + VGRR+ +  E+   ++A VM Y   TG H IRY                  ++  E     G+G         GRPGKETG            S V   R+ +  E +   +DE    +LEQVQRTF +L D + R+FDP  LV+ C+CLNL+YSV  QNDASEFC KLLDR+E+ +K
Sbjct:   99 LQALGQALSVKLMVLRRESAHATEGAGSSRGGIDGGASSTLVLQCCLVLLTRLLK-GAPEGMMPLAGTELGENLIGHVFGSMLFALPQSATVTVTAATTAHPLCEGNGPRAAAFQVLLAAAGRDTATALPQLLYMCGNMMSGATPGLRSCW-HVETSADGNRGGSGYVGLKNQGCTCYMNSLLQQLFMVPAFREAICSAAPMPRPSDASLPEDPAQWVGRRLMMQFESQQPMQAKVMGYQPDTGMHTIRYTTIRPPATAXXXXXXXXXEASAENSDDEGQGIVHTFVLRSGRPGKETGIFTPLPKVHKGSSAVVPQRNLTDKEKEKEAEDEHTRLLLEQVQRTFCYLNDSQTRYFDPRPLVEVCKCLNLQYSVYHQNDASEFCTKLLDRLETAVK 491          
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A225WNK5_9STRA (Ubiquitin-specific protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNK5_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.250e-50
Identity = 127/356 (35.67%), Postives = 191/356 (53.65%), Query Frame = 1
Query:   19 DGAEQQLDLRSLAQVLSAKMMKMLRDGSVSCTA----VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNVAR--RKRLSLRFC---QRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRR---------KLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
            +G +     + LAQ +  K+ +      ++C      VL+G LEV+R+++ +            + +D++  ++   LFT+P +        + P+C  L TRR A  ++ASA       +  L   + +   +  +LRF    + + +   +G  VGLK+QG +CYMN+ LQQLFM P  RQ +L AK+  R         + E FP  L+G RV+L    G   EA V+AY+  TG H +RYD+  E    L EG  RPG E G   I+  +          +T  +A ++VL Q+QRTF +LRD + R+F+P   VD+C CLNL +SV  QNDA+EFCDKLLDR+E+G+K  P
Sbjct: 1417 EGGKSSSYCQKLAQAVVTKLRRGFSSKFLACNERSGDVLIGFLEVLREVLVVHADVRA-----GIARDIVDVVYEECLFTLPTEDRR-----RCPLCVSLETRRPAFKLLASAISSDASILHELQGRLTKLFTRSDALRFKWGQENNIETRGNGEHVGLKNQGCSCYMNSFLQQLFMHPTLRQGLLGAKVASRPTPQEPTKAEAEKFPERLIGCRVALEYLGGRVYEANVVAYDVLTGQHTMRYDNGGEASFVLAEG--RPGNENGRYVILQTE----------LTGTDATLEVLRQLQRTFCYLRDSEMRYFNPKAFVDSCTCLNLEFSVYQQNDATEFCDKLLDRLETGLKTTP 1750          
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A3M6VMM8_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMM8_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.370e-50
Identity = 130/359 (36.21%), Postives = 194/359 (54.04%), Query Frame = 1
Query:   10 EGGDGAEQQLDLRSLAQVLSAKMMKMLRDGSVSCTA----VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNVAR--RKRLSLRFC---QRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRR---------KLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
            EGG+ +      + LAQ + AK+ +      ++C      VL+G LE +R+++ +           E+  +++  +++  LFT+P +   G      P+C  L TRR A  ++ASA       +  L   + R   +  +LRF    + + +   +G  VGLK+QG +CYMN+ LQQLFM P  RQ +L AK+  R         + E FP  LVG RV+L    G   EA V+ Y+E +G H +RY++  E    L EG  RPG E G   I+  +          +T  +A ++VL Q+QRTF +LRD + R+F+P   VD+C CLNL +SV  QNDA+EFCDKLLDR+E+G+K  P
Sbjct: 1294 EGGNSSSY---CQKLAQAVVAKLRRGFSSKFLACNERSGEVLIGFLEFLREVLVVHADVRA-----EIACEIVDVVYDECLFTLPSEDRRGC-----PLCLSLETRRPAFKLLASAISSDASILHDLRGRLIRLFTRSDALRFKWGQENNIETRGNGEHVGLKNQGCSCYMNSFLQQLFMHPTLRQGLLGAKVDLRPTPQEPTKAEAETFPERLVGCRVALECLGGRVYEANVVGYDEMSGQHTMRYENGGEASFVLAEG--RPGNENGRYVILQPE----------LTGTDATLEVLRQLQRTFCYLRDSEMRYFNPKAFVDSCTCLNLEFSVYQQNDATEFCDKLLDRLETGLKTTP 1627          
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A024GF76_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GF76_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.430e-50
Identity = 121/325 (37.23%), Postives = 183/325 (56.31%), Query Frame = 1
Query:  118 VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASA-------ARKSPKAMSSLTDNVA----RRKRLSLRFCQR-HAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMP--------RRKLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
            +L+G L+ VR ++  +   G       + Q ++  +F+  LFT+P          + P+C  + +RR A  ++A+A       A  S   +  L D ++    R   L L++ Q+ H +   SG  VGLK+QG +CYMN+ LQQ+FM P  R+ ++ A++P        +  +E  P ELVG R++L    G   EA V+ Y+  TG H ++Y+   + C  LGEG  RPG E G  +I+  +          +T  EA ++V+ Q+QRTF +LR+ + RFF+P  LVDAC+CLNL +SV  QNDASEFCDKLLDR+E+G+K  P
Sbjct: 1611 ILMGVLDFVRQVLVSKQSVGQ-----RIAQQVVQVVFDDCLFTLPSDEDLD-YGKRSPLCCTVESRRLAFRLLATAITCTDSTAGDSSVILKLLEDRLSHLFHRNGELQLKWNQQNHVEARASGEHVGLKNQGCSCYMNSFLQQIFMQPALRKGLMEAQVPPPQIHTLTKAMVEKCPDELVGSRIALECGGGRVFEATVVNYDSTTGRHTVQYEDASQACFVLGEG--RPGFENGRYAILPPE----------LTGTEATLEVVRQLQRTFCYLRNSEMRFFNPKALVDACKCLNLEFSVYQQNDASEFCDKLLDRLETGLKTTP 1917          
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: K8Z0L3_NANGC (Ubiquitin carboxyl-terminal hydrolase 24 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z0L3_NANGC)

HSP 1 Score: 193 bits (490), Expect = 6.910e-50
Identity = 144/382 (37.70%), Postives = 207/382 (54.19%), Query Frame = 1
Query:    4 PSEGGDGAEQQLDLRSLAQVLSAKMMKMLR-DGSVSCTA--------------VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCT--ELSTRRAAMNVMASAARKSPKAMSS-------LTDNVARRKRLSLRFCQRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRKL---EDF-PRELVGRRVSLP---QEAGGSLEACVMAYNEQTGDHRIRYDS--------KEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
            P+ GGD   Q     +LAQ+++ +++   R  GS S +               VLLG L ++  L+E +  DG+LL GT LG DL+G  F  FLF +P  R         P+C   E   R+   + + + A++  + M S       LT+  A   R   ++   H      G +VGL++QG TCYMN++LQQLFM P  R AIL+A++ RR++   E F   EL+GR++ +    +E    +EA V +++  TG H I+YD         K    +RL    GR GKETG   ++     SS      + + E A +VLEQ+QRTF +L   ++R+FDP  LV+ACRCLNL YSV  QNDASEFCDKLLD++E+ +K  P
Sbjct:  309 PTGGGDDLVQ-----ALAQLVTRRLVHYPRISGSRSASVSNELKSEEGGQSAPVLLGLLRLLNCLVE-QDHDGSLLAGTVLG-DLIGKAFADFLFAVPSLRENNAHG--RPICAAGEAKCRQLVFSSLLTRAKQCSRQMESILGQVMSLTEAAASGLRDRWQYEYLHETKSYPGQYVGLRNQGCTCYMNSLLQQLFMVPRLRDAILAARVKRRRMVSGEMFRDEELIGRQILVDWETEEGTVKMEATVTSFDGSTGKHTIKYDGAGGANGNEKINASVRLKLREGRAGKETGHFQVIPPPLHSSL---SAVREVEQAQRVLEQMQRTFCYLSGSEKRYFDPRFLVEACRCLNLNYSVYQQNDASEFCDKLLDQLEASLKGTP 678          
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A662X9W0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9W0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 3.480e-49
Identity = 129/356 (36.24%), Postives = 191/356 (53.65%), Query Frame = 1
Query:   19 DGAEQQLDLRSLAQVLSAKMMKMLRDGSVSCTA----VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAM----SSLTDNVARRKRLSLRFCQRH-AKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRR---------KLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
            +G +     R LAQ + AK+ +      ++C      VL+G LE +R+++ +     +     E+ +D++  ++   LFT+P +        + P+C  L TRR A  ++ASA   +   +    S LT    R   L  ++ Q +  +   +G  VGLK+QG +CYMN+ LQQLFM P   Q +L AK+  R         + E FP  L+G RV+L    G   EA V+ Y++ TG H +RYD   E    L EG  RPG E G   I+  +          +T  +A ++VL Q+QRTF +LRD + R+F+P   VD+C CLNL +SV  QNDA+EFCDKLLDR+E+G+K  P
Sbjct: 1445 EGGKSSTYCRMLAQGVVAKLRRGFSSKFLACNERSGEVLIGFLEFLREVLVVHTDVRS-----EIARDIVDVVYEECLFTLPSEDRR-----RCPLCVSLETRRPAFKLLASAISSNASILHDLYSRLTRLFTRSDALRSKWGQENNVETRGNGEHVGLKNQGCSCYMNSFLQQLFMHPTLCQGLLGAKVAPRPTPQEPTKAEAEKFPERLIGCRVALECLGGRVYEANVVGYDDLTGRHTLRYDDGGEASFVLAEG--RPGNENGRYVILQPE----------LTGIDATLEVLRQLQRTFCYLRDSEMRYFNPKAFVDSCTCLNLEFSVYQQNDATEFCDKLLDRLETGLKTTP 1778          
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A8K1CH08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH08_PYTOL)

HSP 1 Score: 191 bits (484), Expect = 4.920e-49
Identity = 128/360 (35.56%), Postives = 198/360 (55.00%), Query Frame = 1
Query:   31 QQLDLRSLAQVLSAKMMKMLRDG--------SVSCTAVLLGCLEVVRDLIEIEGPDGTLLDGTELGQDL----MGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNVA----RRKRLSLRFCQR-HAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRK---------LEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
            Q+ ++RS  +V +  +++ LR G        +     V++G LE +RD+         L+  TEL  DL    + ++F   LFT+P          + P+C    TRR A  ++A+A     + +  L D ++    R + L  ++ Q  + +   +G +VGLK+ G +CY+N+ LQQ+FM P FRQ IL+A++P R          ++  P+ LVG R+++    G   EA V+ Y+  +G H+ RYD   E    L EG  RPG E G  +I+  + S +          EA ++VL QVQRTF +LRD + R+++P  L+DAC+CLNL +SV  QNDASEFCDKLLDR+E+ +K+ P
Sbjct: 1360 QEDEVRSHCKVFANLIVEKLRAGFSTKFLASNEHSNDVVIGLLESLRDV---------LVHQTELRADLAEPIVQAVFEDCLFTLPVSSYR-----RRPLCVSTETRRPAFKLLATAISSHAEILHRLYDRLSELFHRNEGLQQKWGQEVNGEMRGNGEYVGLKNMGCSCYINSFLQQIFMQPTFRQGILAAQLPSRPSAPEPTKADVQQEPQRLVGFRIAMECVGGRVYEATVVGYDATSGRHQFRYDDGSEASFVLTEG--RPGNENGRYAILHAELSGA----------EATMEVLRQVQRTFCYLRDSEMRYYNPKALIDACKCLNLEFSVYQQNDASEFCDKLLDRLETALKSTP 1693          
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A4D9D1L0_9STRA (USP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1L0_9STRA)

HSP 1 Score: 191 bits (484), Expect = 5.120e-49
Identity = 132/329 (40.12%), Postives = 185/329 (56.23%), Query Frame = 1
Query:  118 VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCT--ELSTRRAAMNVMASAARKSPKAMSS-------LTDNVARRKRLSLRFCQRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRKL---EDF-PRELVGRRVSLP---QEAGGSLEACVMAYNEQTGDHRIRYDS--------KEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
            VLLG L ++  L+E +  DG+LL GT LG DL+G  F  FLF +P  R         P+C   E   R+   + + + A++    M S       LT+  A   R   ++   H      G +VGL++QG TCYMN++LQQLFM P  R AIL+A++ RR++   E F   EL+GR++ +    +E    +EA V +++  TG H I+YD         K    +RL    GR GKETG   ++     SS      + + E A +VLEQ+QRTF +L   ++R+FDP  LV+ACRCLNL YSV  QNDASEFCDKLLD++E+ +K  P
Sbjct: 2034 VLLGLLRLLNCLVE-QDHDGSLLAGTVLG-DLIGKAFADFLFAVPSLRENNAHG--RPICAAGEAKCRQLVFSSLLTRAKQCSLQMKSILGQVMSLTEAAASGLRDRWQYEYLHETKSYPGQYVGLRNQGCTCYMNSLLQQLFMVPRLRDAILAARVKRRRMVSGEMFRDEELIGRQILVDWETEEGTVKMEATVTSFDGSTGKHTIKYDGAGGANGNEKINASVRLKLREGRAGKETGHFQVIPPPLHSSL---SAVREIEQAQRVLEQMQRTFCYLSGSEKRYFDPRFLVEACRCLNLNYSVYQQNDASEFCDKLLDQLEASLKGTP 2355          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIA1_ECTSI3.390e-13668.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKZ1_9PHAE2.060e-13467.84Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A836CEK4_9STRA2.380e-5237.97USP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A225WNK5_9STRA3.250e-5035.67Ubiquitin-specific protease n=1 Tax=Phytophthora m... [more]
A0A3M6VMM8_9STRA4.370e-5036.21Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A024GF76_9STRA4.430e-5037.23Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
K8Z0L3_NANGC6.910e-5037.70Ubiquitin carboxyl-terminal hydrolase 24 (Fragment... [more]
A0A662X9W0_9STRA3.480e-4936.24Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A8K1CH08_PYTOL4.920e-4935.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9D1L0_9STRA5.120e-4940.12USP domain-containing protein n=2 Tax=Monodopsidac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:597261..602744 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIA1
PFAMsUCH
Model size1370
Max annot lvl2759|Eukaryota
KEGG koko:K11840,ko:K11869
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.76e-134
EggNOG OGsCOG5077@1|root,KOG1866@2759|Eukaryota
EC3.4.19.12
Descriptionubiquitinyl hydrolase activity
Cds size969
COG categoryO
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.55.1prot_A-nodosum_M_contig11.55.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig11 597336..601995 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866487.658717-UTR-A-nodosum_M_contig11:597260..5973351680866487.658717-UTR-A-nodosum_M_contig11:597260..597335Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11 597261..597335 +
1680866487.8427582-UTR-A-nodosum_M_contig11:601995..6022751680866487.8427582-UTR-A-nodosum_M_contig11:601995..602275Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11 601996..602275 +
1680866487.8554533-UTR-A-nodosum_M_contig11:602698..6027441680866487.8554533-UTR-A-nodosum_M_contig11:602698..602744Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11 602699..602744 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866487.6783154-CDS-A-nodosum_M_contig11:597335..5974671680866487.6783154-CDS-A-nodosum_M_contig11:597335..597467Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 597336..597467 +
1680866487.686812-CDS-A-nodosum_M_contig11:599028..5992081680866487.686812-CDS-A-nodosum_M_contig11:599028..599208Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 599029..599208 +
1680866487.7013988-CDS-A-nodosum_M_contig11:599949..6000751680866487.7013988-CDS-A-nodosum_M_contig11:599949..600075Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 599950..600075 +
1680866487.7169771-CDS-A-nodosum_M_contig11:600469..6006321680866487.7169771-CDS-A-nodosum_M_contig11:600469..600632Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 600470..600632 +
1680866487.7286842-CDS-A-nodosum_M_contig11:601627..6019951680866487.7286842-CDS-A-nodosum_M_contig11:601627..601995Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 601628..601995 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig11.55.1

>prot_A-nodosum_M_contig11.55.1 ID=prot_A-nodosum_M_contig11.55.1|Name=mRNA_A-nodosum_M_contig11.55.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=323bp
MMKMLRDGSVSCTAVLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSM
FNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSS
LTDNVARRKRLSLRFCQRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMA
PGFRQAILSAKMPRRKLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQT
GDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQ
DEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDA
SEFCDKLLDRVESGMKNGPSRD*
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mRNA from alignment at A-nodosum_M_contig11:597261..602744+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig11.55.1 ID=mRNA_A-nodosum_M_contig11.55.1|Name=mRNA_A-nodosum_M_contig11.55.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5484bp|location=Sequence derived from alignment at A-nodosum_M_contig11:597261..602744+ (Ascophyllum nodosum dioecious)
GAACCCTCAGAAGGGGGCGACGGCGCAGAGCAGCAGCTCGATCTGCGGTC GCTGGCGCAAGTGCTCTCGGCAAAGATGATGAAAATGCTACGCGACGGTA GCGTGTCGTGCACGGCGGTTCTGTTGGGGTGTCTGGAGGTGGTGCGAGAT CTGATTGAGATCGAAGGACCCGACGGCACGCTGCTGGACGGAACGGAGCT GGGACAGGTgGGGGTTTGCAATCGTTGGGAGATAATTGCATTTGGGGGAC GGAATGGCGCGCGCGCTTGAGAGAATGATCCTACACTTGTTGGTCGTTGC CAGGATATTTTGAGAGGGCTTACAGAGCTGTGTTACGGGCGTAGGCAGTA TCATATTGCAAAGTTTAACGTCAGGCCTAGAATTTGTCTTGGATTTTTTC GGAGCAGAAATATTCCAAGTTGACCTGCCTATTGTTAAAATGTGTTTGTC CCTCTGTAGGGACTCGCCAAAAAAGGGGAAACCTTAAAAAAAGGTGCCTG GCATAAGACACCCACAAAAAGCATGATTCTACAAGTTTCCCCTGTTTTCT TTTTCTTTTTCTTTTTTTCTTTGATCTCACTTATAGCCGATGGACCTTAT CATTAACATCCTGCCTGTGGTCACAAAGGATCTACCCATCGCTCCCCGGT TCACGCCTTACGATTTTTTATCGCGATGCAAGTTCAGCACTTTTACAACT CGTCAACCAATGGTTGAATTTTGCTTTTTCACGTTCCCACGCTTTCCGTT ACGAAAGAAAGAACACAAATCCTATTTTGGTAAGAATCGAACTCACGACT TCCGCACTAGCAGGTGTGCAGGTTACCTACTAGACCACTCGGATTTTCTG AACTACAGTGACGCATCTGAACCCTCTATTAATATCAATATTAATATCAA TATTAATATCAATATATTAGAGCATCCACCCAATCGGGGAGGGAATTGTC TTGTCATAACGTTTACTTGGTATTGGTAGGTGGAACACAGATACATAGGC TGTACTGTACTGTACTGTACTGTACTGTACTGTAATGTATTACAGTATAT TGTAAGGGCAAAACTATTCGTATTGATATCAGGTACCGTACATATTTCAA TACAATAGTGGTTCTACGAGGAACATTTAAAATGTCGTCCTTCGGAGGGA TTGACTGCCTGTGGACTCATCATAATTTTGATACTAATATTTGATATTTT GCTGTTTTCTGAGGTTACCCCTTTTTGGCCATGATATAGCTCATATCATA GATCTAGGCAGGTAGGTAGAGCTCTAGGTAGGTACCGGCATGCCCATGTT TTTTGGCGTGCCGCCCCTTTCTCTCTATCTATTTATTTAATCTCATTTGT AGTCTAGCCGATGGACGCACCCGCCTTAACGTCGCCATCCTGTTAACGCC TGTGGCCACTAAGATTCTTCCCATCTCTCCCCGGTTCACGCCTTAGTTTT TTTTATCGCGATGTAAGTTGAGCACTTTTACAACTCGTCAACTATTATAG TCTATAATATCAATAGAGCCAATGGTTGGATTTTGCTCAGTGTAGTCACG TTCTCACGCTTTCCACTATTTTTTTCGGAAGAAAGAACACAAATTATGGT TATTTTAGACAAGAATCCAACTATTATATTAATTAATATCGAACTCACGA CTTCCGCACTGGCTATTAATAGCAGGTGTGCAGGTTACCTACTACTTTGT ATTACAGTATTATATATATACTCCATATCGACCCTAACCCCGATGCTGTC CGTTCGGTGCAAATCCAGGACCTGATGGGCAGTATGTTCAACGGTTTCTT GTTCACGATGCCGGAGCAGAGGGGGGCGGGGGGCATATCGTTGAAGCACC CTGTGTGCACGGAGCTCTCCACGAGGCGGGCGGCGATGAACGTGATGGCC TCTGCCGCCAGGAAGAGTCCGAAGGCCATGTCTAGTCTTACGGATAATGT GAGAAAAATAAAAATAACAGGAAAAAAGGGACGGACGGATTTTGCTGCTG CTGGCTGCTGCTGGCTGCTGCTGGTATGTTGTTGGTGCTCCAATGCTCCA GTGCTCCAGTGCTCCAGTTTGCCTTGGGTTGCCGCCGCTACCGACCGACT GTTACTATTTATAAGCGATCAACACTTTCCCCCCATCAGCGAAAGGTGTC GTGTGCTATGTCTGCGCGGCGTCAACGACAGGGTTAGCTTAGCGCGGGGA GGGAGTGCAAAGATATGGCACCGATTTTTACCGTAGTAAAAGAGTAGAGA TGCGTACATCTTCCGCCTGATCATTTCCAAGTAGACTATAGCATTATTTA ATATCAATAGTCTGCACTCCGAGGACAGGACATATGATATGTCCACGAGA GCTCTTCTCGTGCTTTGTGTGCGCGCGCGGTTCTCGGCGGCAGCTCAACG ACAACCTATCTGCATCTTGTTTTGGTGCTGCAGCAGAACGAAAACAGACT ATACTATTATATAAATAGAGGCGCAGGGCGAAGACCGCTCAGCTCACTCT TTTACTTTGAGGCTCCTCGCGCGGATTTTTCGATCTTGTTACCCCTCTTT TCCTTCACGTGTGCGTTGTGAGTTCCCCCCCCCCACCGTTTCCCATATAA TATCACATAATACCACATAATACCAGGGTATGTTTTGAACCTCACCTCAC CTCACCTCACATCACCCGTGTTGTGTGTGCCGCCAAAAGGTCGCTAGGCG GAAGCGTCTGTCTTTGAGGTTCTGCCAGCGACACGCCAAGCCTCCAGAAA GCGGAGGCTTCGTCGGCCTCAAGAGTCAAGGCCTTACCTGTTACATGAAT GCTGTACTACAACAGGCAAATACTTTTTGCTTTTTGCTTCTGTTCGATTT TCTTCTATTGCACCTCCCTCCCCCCCCAGTTCGATGATGTCGATGATGTT GATGACGTCGGTGATGTCGGTGATGATAACTCTGGGGGGTATGGGATGAG CAGTTCGACGTGCAGTGCTCTTGTGGCGTTTTTTGTCCCTGGAAAGATTT GACATTCTACAAAATCTTTTCTATCCAGCGCGAATGTTTTGTGCGGTTTT GTTGAAGAAAGTTCGCGAATTCCGTACTAAAGCTTGTGCTAGACACGTAA ACCATTCCGCCGCAATACAGACATTATTCTAGATACAGAACAAGCTAAAC GTAATATAATTCTCATAAAGAATGATTTTCTCCAAACCGTGCAACTGTTT TTCTGGCAGCTCTTCATGGCGCCAGGGTTTCGCCAGGCGATATTATCGGC GAAGATGCCACGCCGAAAGCTGGAAGACTTTCCGCGGGAGCTGGTCGGCA GGCGCGTGTCGCTCCCGCAGGAAGCCGGAGGCTCCCTCGAGGCGTGCGTG ATGGCTTACAACGAGCAGACGGGTGCGCGCCGTCCTACTTGTTTCATCCT ACGGCGTGTTGTGGCGTGGAGTGGCGTGTTGTGACGTGTTGTGGAGTGGA GTGGAGTGGAGTGGAGGCTTTTCGCGTTCCTTGTCTTACACCGCGCTCGC GCTCGTGTCGCTCTTGCCTTGTCCGGAGTTTGTTTTTGTTTTTGTTGTTT TTCTGTAACAGTAGTTCCATGTTTTGTAGtTTTTTTTTTTAAGTGTGTGT GTGTGTGTGGTATTATGCATGTCTAGGTTCCTGTTGTACTTTTAAGTACT TTTGCTTTTGATACGTGGGTGTCAAATATTTTCACGTACCAATAAAGGAG TACGTGTACTGATGATGGCTGTTATTATACTGTTATTCTAGTTAATACAT ATATGGGTGGAGTTAACAGGCGCCAGATTTGACGCTGGCTGGCAGGCCAG GCCAGGCAGacACAATGTATAGAAATCTATAAAACGAACACGTTTCCACT TTTCAGGTTAGGAAGATGTAAGTATATATCCACATTTCTCAGGATCTTCT TTTATACTGTACTCTGAATAGGTAAACTTTCCAATGAACAACCGTTACCT ATTTATGGCTTGGAGAGAGGGGGTGAAATAGGGTTACCGTTACCGTTACC ATTACTGTTCTGTACCATGGACCACCGCGCGGTTACCTGAATCAGCTTAC CTTACTTTATTGCTGGACACTAGTAATAGAAAAAAAATACCCCCACGCTT TGGCACCCACGCTAACCTTTTGACGCTTAAGTATAACTTACACTAAAAAC ACCTTCAGTACTGTACATCGTTACTTAGCATTACACTTAGGCCTACAAGT ACACTCGCACCTTTACCTTTAGATTCATTATGGCTCTCAACTTTTGTTAA TTTATGTGTGAAATTACACCTCACTATAATAGTAATAACTGAAATACAGT CAAACGAGCCTAGTAATAGTAATATTAATATTAATAGTTTCTTCTCTTTG GATGCGTGCACGCGCAGGCGATCACCGGATTCGCTACGACTCCAAGGAGG AGTTCTGCCTCCGCCTGGGGGAAGGGGGCGGACGTCCGGGCAAGGAAACC GGAGCCGTTAGCATAGTCTGGAGAGACAGGTCGTCCTCCGGTGTCGAGGG AAAGACCATGACCCAGGACGAGGCAGCGGTACAGGTGTTGGAGCAGGTGC AGAGGACGTTTCTTCACCTGCGGGACGGAAAGCGGCGCTTCTTCGACCCC ATTCGCCTGGTGGACGCCTGCCGCTGCCTCAACCTTCGGTACTCGGTGAA TCTGCAGAACGACGCGAGCGAGTTCTGTGACAAGCTACTCGACCGAGTGG AGTCGGGCATGAAAAACGGTCCATCTCGCGATTGAAAGGGAGATGGCTCG GGCAAAGACCGAGGCTGGGGAGGCTGGCGGGATGATTATGGAGTCGGAGA GCGGCATCGGCGGAGGCGGGAAGTCAAATGTCGCGGCGCTGAATCGATCA TATGGGGGCACCCGTGGGTACCAGAAGATCCCCGCGGGGTGCTCGCACCG CACGAACAAGTCGCAGCCATTCACCAACCTGGAGGTGGTGATCTCCGGCA AGGAGTCGCTGGAGGAGAGCCTCGCGAGTTCCGTGGAGGCGGAGCTCATG GTTGGCGACAACAAGGTGGGTGAGACAACGAGGGAAAACGAGAGGATCCG TGGCAGCCGTTTCGGTTCGGTTGGATTCGGGTTTTTTAGAATCGGCTCAG TTCTTTTCAGTTGGTTTTGAAATGTAATCATTTTTCGGGGGAGGGGGATT GGTTTGACGTCGCtttTTACTGTTCTATCTATCGGTGGAAAGGAGGAAAG CAGGGAAAAgGGAGTTAATTAGTAAATTAGGGATATCGCTCCGTCGTAGT TCCAACCTCGTCACATCAAAGTGTTGTATGTAACTGCGATTTGTGAAAGG TTTTCCTTAGCGGTGATCCCGATTTCAAGCAGTTTGGTTAAGTGATCATG TGAAGAAAAAGAATCACGGAAGAGCGCCCCCCCCATCCTCGCGATGCCGC CGCAAATCCTTGATCTCCGCGCCCACACATGCACGAAGGTGGTTTGTGAG GACTGCGCCAAGAAGATGGACGCGCGGATGAGAA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig11:597261..602744+

>mRNA_A-nodosum_M_contig11.55.1 ID=mRNA_A-nodosum_M_contig11.55.1|Name=mRNA_A-nodosum_M_contig11.55.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=969bp|location=Sequence derived from alignment at A-nodosum_M_contig11:597261..602744+ (Ascophyllum nodosum dioecious)
ATGATGAAAATGCTACGCGACGGTAGCGTGTCGTGCACGGCGGTTCTGTT
GGGGTGTCTGGAGGTGGTGCGAGATCTGATTGAGATCGAAGGACCCGACG
GCACGCTGCTGGACGGAACGGAGCTGGGACAGGACCTGATGGGCAGTATG
TTCAACGGTTTCTTGTTCACGATGCCGGAGCAGAGGGGGGCGGGGGGCAT
ATCGTTGAAGCACCCTGTGTGCACGGAGCTCTCCACGAGGCGGGCGGCGA
TGAACGTGATGGCCTCTGCCGCCAGGAAGAGTCCGAAGGCCATGTCTAGT
CTTACGGATAATGTCGCTAGGCGGAAGCGTCTGTCTTTGAGGTTCTGCCA
GCGACACGCCAAGCCTCCAGAAAGCGGAGGCTTCGTCGGCCTCAAGAGTC
AAGGCCTTACCTGTTACATGAATGCTGTACTACAACAGCTCTTCATGGCG
CCAGGGTTTCGCCAGGCGATATTATCGGCGAAGATGCCACGCCGAAAGCT
GGAAGACTTTCCGCGGGAGCTGGTCGGCAGGCGCGTGTCGCTCCCGCAGG
AAGCCGGAGGCTCCCTCGAGGCGTGCGTGATGGCTTACAACGAGCAGACG
GGCGATCACCGGATTCGCTACGACTCCAAGGAGGAGTTCTGCCTCCGCCT
GGGGGAAGGGGGCGGACGTCCGGGCAAGGAAACCGGAGCCGTTAGCATAG
TCTGGAGAGACAGGTCGTCCTCCGGTGTCGAGGGAAAGACCATGACCCAG
GACGAGGCAGCGGTACAGGTGTTGGAGCAGGTGCAGAGGACGTTTCTTCA
CCTGCGGGACGGAAAGCGGCGCTTCTTCGACCCCATTCGCCTGGTGGACG
CCTGCCGCTGCCTCAACCTTCGGTACTCGGTGAATCTGCAGAACGACGCG
AGCGAGTTCTGTGACAAGCTACTCGACCGAGTGGAGTCGGGCATGAAAAA
CGGTCCATCTCGCGATTGA
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