mRNA_A-nodosum_M_contig11.55.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: D8LIA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA1_ECTSI) HSP 1 Score: 442 bits (1136), Expect = 3.390e-136 Identity = 234/343 (68.22%), Postives = 271/343 (79.01%), Query Frame = 1
Query: 34 QLDLRSLAQVLSAKMMKMLRDGSVSCTAVLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNV---ARRKRLSLRF-----CQRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRKLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSS-GVEG--KTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNG 1029
+LDL +L + LSAKM+ M RDG SC AVL GCLE++RDL+EIEGPDGT L G ELGQD +G +F GFLFTMPEQRG G + ++ PVC + +TRRAA+N +ASAARKSPKAMS+L DNV R SLR C AK P+SGGFVGLK+QG TCYMN++LQQLFM P R+ IL AK+PRR L+DFPRELVGRRV++ E GGS+EA V +YNE++G+H IRYD+K+E RLG GGGRPGKETGAVS+VW D SS G EG KTMT DEA QVLEQVQRTFLHLRDG+RRFFDPIRLV+ACRCLNL Y V+ QNDASEFCDKLLDRVESGMK G
Sbjct: 1065 ELDLGALGRALSAKMVSMPRDGHGSCKAVLQGCLELLRDLVEIEGPDGTFLKGAELGQDFVGKIFKGFLFTMPEQRGRG-MRVERPVCADPATRRAALNALASAARKSPKAMSALLDNVDVFVGRVLPSLRHRWGYECSFDAKRPQSGGFVGLKNQGCTCYMNSLLQQLFMVPALRKGILEAKLPRRNLQDFPRELVGRRVAVQWETGGSVEAYVHSYNERSGEHVIRYDAKDEVTFRLGPGGGRPGKETGAVSLVWGDSPSSRGGEGMGKTMTPDEATAQVLEQVQRTFLHLRDGERRFFDPIRLVEACRCLNLEYLVHQQNDASEFCDKLLDRVESGMKAG 1406
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE) HSP 1 Score: 437 bits (1125), Expect = 2.060e-134 Identity = 232/342 (67.84%), Postives = 269/342 (78.65%), Query Frame = 1
Query: 37 LDLRSLAQVLSAKMMKMLRDGSVSCTAVLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNV---ARRKRLSLRF-----CQRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRKLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSS-GVEG--KTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNG 1029
LDL +L + LSAKM+ M RDG SC AVL GCLE++RDL+EIEGPDGT L G ELGQD +G +F GFLFTMPEQRG G + ++ PVC + +TRRAA+N +ASAARKSPKAMS+L DNV R SLR C AK P+SGGFVGLK+QG TCYMN++LQQLFM P R+ IL AK+PRR L+DFP ELVGRRV++ E GGS+EA V +YNE+TG+H IRYD+K+E RLG GGGRPGKETGAVS+VW D SS G EG KTMT DEA QVLE+VQRTFLHLRDG+RRFFDPIRLV+ACRCLNL Y V+ QNDASEFCDKLLDR+ESGMK G
Sbjct: 1870 LDLGALGRALSAKMVSMPRDGHGSCKAVLQGCLELLRDLVEIEGPDGTFLKGAELGQDFVGKIFKGFLFTMPEQRGRG-MRVERPVCADPATRRAALNALASAARKSPKAMSALLDNVDVFVGRVIPSLRHRWGYECSFDAKRPQSGGFVGLKNQGCTCYMNSLLQQLFMVPALRKCILEAKLPRRNLQDFPLELVGRRVAVQWETGGSVEAYVHSYNERTGEHVIRYDAKDEVTFRLGPGGGRPGKETGAVSLVWGDSPSSRGGEGMGKTMTPDEATAQVLEEVQRTFLHLRDGERRFFDPIRLVEACRCLNLEYLVHQQNDASEFCDKLLDRLESGMKAG 2210
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A836CEK4_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEK4_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.380e-52 Identity = 150/395 (37.97%), Postives = 203/395 (51.39%), Query Frame = 1
Query: 43 LRSLAQVLSAKMMKMLR----------------DGSVSCTAVLLGCLEVVRDLIEIEGPDGTL-LDGTELGQDLMGSMFNGFLFTMPEQRGAG--GISLKHPVCTELSTRRAAMNVM-ASAARKSPKAMSSLT---DNVARRKRLSLRFCQRHAKPPESG-----GFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAK-MPR---RKLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRY------------------DSKEEFCLRLGEG--------GGRPGKETGAV----------SIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMK 1023
L++L Q LS K+M + R DG S T VL CL ++ L++ P+G + L GTELG++L+G +F LF +P+ + HP+C R AA V+ A+A R + A+ L N+ LR C H + G G+VGLK+QG TCYMN++LQQLFM P FR+AI SA MPR L + P + VGRR+ + E+ ++A VM Y TG H IRY ++ E G+G GRPGKETG S V R+ + E + +DE +LEQVQRTF +L D + R+FDP LV+ C+CLNL+YSV QNDASEFC KLLDR+E+ +K
Sbjct: 99 LQALGQALSVKLMVLRRESAHATEGAGSSRGGIDGGASSTLVLQCCLVLLTRLLK-GAPEGMMPLAGTELGENLIGHVFGSMLFALPQSATVTVTAATTAHPLCEGNGPRAAAFQVLLAAAGRDTATALPQLLYMCGNMMSGATPGLRSCW-HVETSADGNRGGSGYVGLKNQGCTCYMNSLLQQLFMVPAFREAICSAAPMPRPSDASLPEDPAQWVGRRLMMQFESQQPMQAKVMGYQPDTGMHTIRYTTIRPPATAXXXXXXXXXEASAENSDDEGQGIVHTFVLRSGRPGKETGIFTPLPKVHKGSSAVVPQRNLTDKEKEKEAEDEHTRLLLEQVQRTFCYLNDSQTRYFDPRPLVEVCKCLNLQYSVYHQNDASEFCTKLLDRLETAVK 491
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A225WNK5_9STRA (Ubiquitin-specific protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNK5_9STRA) HSP 1 Score: 194 bits (493), Expect = 3.250e-50 Identity = 127/356 (35.67%), Postives = 191/356 (53.65%), Query Frame = 1
Query: 19 DGAEQQLDLRSLAQVLSAKMMKMLRDGSVSCTA----VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNVAR--RKRLSLRFC---QRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRR---------KLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
+G + + LAQ + K+ + ++C VL+G LEV+R+++ + + +D++ ++ LFT+P + + P+C L TRR A ++ASA + L + + + +LRF + + + +G VGLK+QG +CYMN+ LQQLFM P RQ +L AK+ R + E FP L+G RV+L G EA V+AY+ TG H +RYD+ E L EG RPG E G I+ + +T +A ++VL Q+QRTF +LRD + R+F+P VD+C CLNL +SV QNDA+EFCDKLLDR+E+G+K P
Sbjct: 1417 EGGKSSSYCQKLAQAVVTKLRRGFSSKFLACNERSGDVLIGFLEVLREVLVVHADVRA-----GIARDIVDVVYEECLFTLPTEDRR-----RCPLCVSLETRRPAFKLLASAISSDASILHELQGRLTKLFTRSDALRFKWGQENNIETRGNGEHVGLKNQGCSCYMNSFLQQLFMHPTLRQGLLGAKVASRPTPQEPTKAEAEKFPERLIGCRVALEYLGGRVYEANVVAYDVLTGQHTMRYDNGGEASFVLAEG--RPGNENGRYVILQTE----------LTGTDATLEVLRQLQRTFCYLRDSEMRYFNPKAFVDSCTCLNLEFSVYQQNDATEFCDKLLDRLETGLKTTP 1750
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A3M6VMM8_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMM8_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.370e-50 Identity = 130/359 (36.21%), Postives = 194/359 (54.04%), Query Frame = 1
Query: 10 EGGDGAEQQLDLRSLAQVLSAKMMKMLRDGSVSCTA----VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNVAR--RKRLSLRFC---QRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRR---------KLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
EGG+ + + LAQ + AK+ + ++C VL+G LE +R+++ + E+ +++ +++ LFT+P + G P+C L TRR A ++ASA + L + R + +LRF + + + +G VGLK+QG +CYMN+ LQQLFM P RQ +L AK+ R + E FP LVG RV+L G EA V+ Y+E +G H +RY++ E L EG RPG E G I+ + +T +A ++VL Q+QRTF +LRD + R+F+P VD+C CLNL +SV QNDA+EFCDKLLDR+E+G+K P
Sbjct: 1294 EGGNSSSY---CQKLAQAVVAKLRRGFSSKFLACNERSGEVLIGFLEFLREVLVVHADVRA-----EIACEIVDVVYDECLFTLPSEDRRGC-----PLCLSLETRRPAFKLLASAISSDASILHDLRGRLIRLFTRSDALRFKWGQENNIETRGNGEHVGLKNQGCSCYMNSFLQQLFMHPTLRQGLLGAKVDLRPTPQEPTKAEAETFPERLVGCRVALECLGGRVYEANVVGYDEMSGQHTMRYENGGEASFVLAEG--RPGNENGRYVILQPE----------LTGTDATLEVLRQLQRTFCYLRDSEMRYFNPKAFVDSCTCLNLEFSVYQQNDATEFCDKLLDRLETGLKTTP 1627
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A024GF76_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GF76_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.430e-50 Identity = 121/325 (37.23%), Postives = 183/325 (56.31%), Query Frame = 1
Query: 118 VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASA-------ARKSPKAMSSLTDNVA----RRKRLSLRFCQR-HAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMP--------RRKLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
+L+G L+ VR ++ + G + Q ++ +F+ LFT+P + P+C + +RR A ++A+A A S + L D ++ R L L++ Q+ H + SG VGLK+QG +CYMN+ LQQ+FM P R+ ++ A++P + +E P ELVG R++L G EA V+ Y+ TG H ++Y+ + C LGEG RPG E G +I+ + +T EA ++V+ Q+QRTF +LR+ + RFF+P LVDAC+CLNL +SV QNDASEFCDKLLDR+E+G+K P
Sbjct: 1611 ILMGVLDFVRQVLVSKQSVGQ-----RIAQQVVQVVFDDCLFTLPSDEDLD-YGKRSPLCCTVESRRLAFRLLATAITCTDSTAGDSSVILKLLEDRLSHLFHRNGELQLKWNQQNHVEARASGEHVGLKNQGCSCYMNSFLQQIFMQPALRKGLMEAQVPPPQIHTLTKAMVEKCPDELVGSRIALECGGGRVFEATVVNYDSTTGRHTVQYEDASQACFVLGEG--RPGFENGRYAILPPE----------LTGTEATLEVVRQLQRTFCYLRNSEMRFFNPKALVDACKCLNLEFSVYQQNDASEFCDKLLDRLETGLKTTP 1917
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: K8Z0L3_NANGC (Ubiquitin carboxyl-terminal hydrolase 24 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z0L3_NANGC) HSP 1 Score: 193 bits (490), Expect = 6.910e-50 Identity = 144/382 (37.70%), Postives = 207/382 (54.19%), Query Frame = 1
Query: 4 PSEGGDGAEQQLDLRSLAQVLSAKMMKMLR-DGSVSCTA--------------VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCT--ELSTRRAAMNVMASAARKSPKAMSS-------LTDNVARRKRLSLRFCQRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRKL---EDF-PRELVGRRVSLP---QEAGGSLEACVMAYNEQTGDHRIRYDS--------KEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
P+ GGD Q +LAQ+++ +++ R GS S + VLLG L ++ L+E + DG+LL GT LG DL+G F FLF +P R P+C E R+ + + + A++ + M S LT+ A R ++ H G +VGL++QG TCYMN++LQQLFM P R AIL+A++ RR++ E F EL+GR++ + +E +EA V +++ TG H I+YD K +RL GR GKETG ++ SS + + E A +VLEQ+QRTF +L ++R+FDP LV+ACRCLNL YSV QNDASEFCDKLLD++E+ +K P
Sbjct: 309 PTGGGDDLVQ-----ALAQLVTRRLVHYPRISGSRSASVSNELKSEEGGQSAPVLLGLLRLLNCLVE-QDHDGSLLAGTVLG-DLIGKAFADFLFAVPSLRENNAHG--RPICAAGEAKCRQLVFSSLLTRAKQCSRQMESILGQVMSLTEAAASGLRDRWQYEYLHETKSYPGQYVGLRNQGCTCYMNSLLQQLFMVPRLRDAILAARVKRRRMVSGEMFRDEELIGRQILVDWETEEGTVKMEATVTSFDGSTGKHTIKYDGAGGANGNEKINASVRLKLREGRAGKETGHFQVIPPPLHSSL---SAVREVEQAQRVLEQMQRTFCYLSGSEKRYFDPRFLVEACRCLNLNYSVYQQNDASEFCDKLLDQLEASLKGTP 678
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A662X9W0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9W0_9STRA) HSP 1 Score: 191 bits (485), Expect = 3.480e-49 Identity = 129/356 (36.24%), Postives = 191/356 (53.65%), Query Frame = 1
Query: 19 DGAEQQLDLRSLAQVLSAKMMKMLRDGSVSCTA----VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAM----SSLTDNVARRKRLSLRFCQRH-AKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRR---------KLEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
+G + R LAQ + AK+ + ++C VL+G LE +R+++ + + E+ +D++ ++ LFT+P + + P+C L TRR A ++ASA + + S LT R L ++ Q + + +G VGLK+QG +CYMN+ LQQLFM P Q +L AK+ R + E FP L+G RV+L G EA V+ Y++ TG H +RYD E L EG RPG E G I+ + +T +A ++VL Q+QRTF +LRD + R+F+P VD+C CLNL +SV QNDA+EFCDKLLDR+E+G+K P
Sbjct: 1445 EGGKSSTYCRMLAQGVVAKLRRGFSSKFLACNERSGEVLIGFLEFLREVLVVHTDVRS-----EIARDIVDVVYEECLFTLPSEDRR-----RCPLCVSLETRRPAFKLLASAISSNASILHDLYSRLTRLFTRSDALRSKWGQENNVETRGNGEHVGLKNQGCSCYMNSFLQQLFMHPTLCQGLLGAKVAPRPTPQEPTKAEAEKFPERLIGCRVALECLGGRVYEANVVGYDDLTGRHTLRYDDGGEASFVLAEG--RPGNENGRYVILQPE----------LTGIDATLEVLRQLQRTFCYLRDSEMRYFNPKAFVDSCTCLNLEFSVYQQNDATEFCDKLLDRLETGLKTTP 1778
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A8K1CH08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH08_PYTOL) HSP 1 Score: 191 bits (484), Expect = 4.920e-49 Identity = 128/360 (35.56%), Postives = 198/360 (55.00%), Query Frame = 1
Query: 31 QQLDLRSLAQVLSAKMMKMLRDG--------SVSCTAVLLGCLEVVRDLIEIEGPDGTLLDGTELGQDL----MGSMFNGFLFTMPEQRGAGGISLKHPVCTELSTRRAAMNVMASAARKSPKAMSSLTDNVA----RRKRLSLRFCQR-HAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRK---------LEDFPRELVGRRVSLPQEAGGSLEACVMAYNEQTGDHRIRYDSKEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
Q+ ++RS +V + +++ LR G + V++G LE +RD+ L+ TEL DL + ++F LFT+P + P+C TRR A ++A+A + + L D ++ R + L ++ Q + + +G +VGLK+ G +CY+N+ LQQ+FM P FRQ IL+A++P R ++ P+ LVG R+++ G EA V+ Y+ +G H+ RYD E L EG RPG E G +I+ + S + EA ++VL QVQRTF +LRD + R+++P L+DAC+CLNL +SV QNDASEFCDKLLDR+E+ +K+ P
Sbjct: 1360 QEDEVRSHCKVFANLIVEKLRAGFSTKFLASNEHSNDVVIGLLESLRDV---------LVHQTELRADLAEPIVQAVFEDCLFTLPVSSYR-----RRPLCVSTETRRPAFKLLATAISSHAEILHRLYDRLSELFHRNEGLQQKWGQEVNGEMRGNGEYVGLKNMGCSCYINSFLQQIFMQPTFRQGILAAQLPSRPSAPEPTKADVQQEPQRLVGFRIAMECVGGRVYEATVVGYDATSGRHQFRYDDGSEASFVLTEG--RPGNENGRYAILHAELSGA----------EATMEVLRQVQRTFCYLRDSEMRYYNPKALIDACKCLNLEFSVYQQNDASEFCDKLLDRLETALKSTP 1693
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Match: A0A4D9D1L0_9STRA (USP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1L0_9STRA) HSP 1 Score: 191 bits (484), Expect = 5.120e-49 Identity = 132/329 (40.12%), Postives = 185/329 (56.23%), Query Frame = 1
Query: 118 VLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMFNGFLFTMPEQRGAGGISLKHPVCT--ELSTRRAAMNVMASAARKSPKAMSS-------LTDNVARRKRLSLRFCQRHAKPPESGGFVGLKSQGLTCYMNAVLQQLFMAPGFRQAILSAKMPRRKL---EDF-PRELVGRRVSLP---QEAGGSLEACVMAYNEQTGDHRIRYDS--------KEEFCLRLGEGGGRPGKETGAVSIVWRDRSSSGVEGKTMTQDEAAVQVLEQVQRTFLHLRDGKRRFFDPIRLVDACRCLNLRYSVNLQNDASEFCDKLLDRVESGMKNGP 1032
VLLG L ++ L+E + DG+LL GT LG DL+G F FLF +P R P+C E R+ + + + A++ M S LT+ A R ++ H G +VGL++QG TCYMN++LQQLFM P R AIL+A++ RR++ E F EL+GR++ + +E +EA V +++ TG H I+YD K +RL GR GKETG ++ SS + + E A +VLEQ+QRTF +L ++R+FDP LV+ACRCLNL YSV QNDASEFCDKLLD++E+ +K P
Sbjct: 2034 VLLGLLRLLNCLVE-QDHDGSLLAGTVLG-DLIGKAFADFLFAVPSLRENNAHG--RPICAAGEAKCRQLVFSSLLTRAKQCSLQMKSILGQVMSLTEAAASGLRDRWQYEYLHETKSYPGQYVGLRNQGCTCYMNSLLQQLFMVPRLRDAILAARVKRRRMVSGEMFRDEELIGRQILVDWETEEGTVKMEATVTSFDGSTGKHTIKYDGAGGANGNEKINASVRLKLREGRAGKETGHFQVIPPPLHSSL---SAVREIEQAQRVLEQMQRTFCYLSGSEKRYFDPRFLVEACRCLNLNYSVYQQNDASEFCDKLLDQLEASLKGTP 2355 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11.55.1 >prot_A-nodosum_M_contig11.55.1 ID=prot_A-nodosum_M_contig11.55.1|Name=mRNA_A-nodosum_M_contig11.55.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=323bp MMKMLRDGSVSCTAVLLGCLEVVRDLIEIEGPDGTLLDGTELGQDLMGSMback to top mRNA from alignment at A-nodosum_M_contig11:597261..602744+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11.55.1 ID=mRNA_A-nodosum_M_contig11.55.1|Name=mRNA_A-nodosum_M_contig11.55.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5484bp|location=Sequence derived from alignment at A-nodosum_M_contig11:597261..602744+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11:597261..602744+ >mRNA_A-nodosum_M_contig11.55.1 ID=mRNA_A-nodosum_M_contig11.55.1|Name=mRNA_A-nodosum_M_contig11.55.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=969bp|location=Sequence derived from alignment at A-nodosum_M_contig11:597261..602744+ (Ascophyllum nodosum dioecious)back to top |