mRNA_A-nodosum_M_contig11.26.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig11.26.2
Unique NamemRNA_A-nodosum_M_contig11.26.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: A0A6H5JFW9_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFW9_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 5.410e-130
Identity = 228/375 (60.80%), Postives = 259/375 (69.07%), Query Frame = 1
Query:  745 HLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFPPPLSKASPSXXXXXXXXXXXDIXXXXXXXXXXXXXXXXXG----------------------KGG-------------RLEGYPNKVVE---KKEEIDD---------AQDPAAQSLVKSLLSLAPARRPSIAEIKDHPFFEGVNFDALRAAVRAQAYAEEEEALVAAAVAGGDVWLRDQPVICLSENVDDHYGNVFADF 1728
            HLREE+ IS+KLQ SDFLVRTAGTFQN RSVVFAMEYLPGGDLYQRL+DKGTL L ETVAW AQAVLAIEDLHA +IVHRDVKPENFLMGKSGTLKLTDFGFARELAP ERL SQFGTPEYVA EVL+GCGHG PVDLWALG+LIYELLVG TPFK+ SV++MYERI++GDYAFP P   ASP+            +                 G                      KGG             R +  P K  +   +K+ + D         AQDPAAQSLVK+LL L P+RRPS+ E+K HPFF GV+FD LRAAVRAQA  EEEEA+VAAA+ GGDVW+R QPV+C S+ ++D+YG VF  F
Sbjct:    2 HLREERHISTKLQGSDFLVRTAGTFQNSRSVVFAMEYLPGGDLYQRLSDKGTLSLRETVAWTAQAVLAIEDLHAKNIVHRDVKPENFLMGKSGTLKLTDFGFARELAPDERLYSQFGTPEYVAAEVLSGCGHGMPVDLWALGVLIYELLVGQTPFKSPSVEEMYERIATGDYAFPKP--PASPACAAAEGSSSLKCLSSKVVGKSGSSLSNVHKGGVQKQAFSLKKSDSSLSATASKKGGLAMAVGPNGADHTRQQAEPAKSKQAQRQKQGMADSNNSHCGGGAQDPAAQSLVKALLCLDPSRRPSLPEVKRHPFFAGVDFDGLRAAVRAQADREEEEAVVAAAIEGGDVWVRGQPVVCQSDEINDNYGGVFVGF 374          
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: E1Z5I2_CHLVA (Protein kinase domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5I2_CHLVA)

HSP 1 Score: 181 bits (459), Expect = 2.490e-47
Identity = 103/243 (42.39%), Postives = 141/243 (58.02%), Query Frame = 1
Query:  562 RIRPKYLAPLEL---RVEDFECGDCIGKGSYSRVFLGTHMPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFPPPLS 1281
            R    Y A L+L   R+EDFE G  +G GS+ RV L  H  +G   A+K +SK         ++HLR E+ I  +L     LVR  G  Q+ + V F MEY+PGG+ +  L +KG L       +  + +L  + LH  DIV+RD+KPEN L+  +G LKLTDFGFA+ +   +R  +  GTP+Y+APE++   GHGK VD WALG+LIYE+L G+ PF        Y++I  G   FPP LS
Sbjct:    4 RASQPYAADLKLESCRLEDFEVGRVLGTGSFGRVSLARHRGTGLVCAIKALSKAHI------ISHLRSERDILRQLDHP-LLVRMHGCCQDEQCVYFVMEYVPGGEFFSHLKNKGKLSEEAARLYAGEVLLMFDYLHTQDIVYRDLKPENLLLDAAGHLKLTDFGFAKAIG-AKRTYTLCGTPDYLAPEIILNKGHGKAVDWWALGVLIYEMLAGYPPFLDDDPLSTYKKILKGVLTFPPHLS 238          
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: A0A507D6J9_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D6J9_9FUNG)

HSP 1 Score: 179 bits (455), Expect = 2.010e-46
Identity = 93/235 (39.57%), Postives = 149/235 (63.40%), Query Frame = 1
Query:  565 IRPKYLAPLELRVEDFECGDCIGKGSYSRVFLGTHMPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFP 1269
            ++  ++ P  + ++DFE  D +G G++ RV+L  H+ S   +A+KV+ K +    ++ + H+  EK I S ++   F+V    TFQ+ +++   +EY+PGG+L+  L   G  P      + AQ VLAIE LH  DIV+RD+KPEN L+ ++G +++TDFGFA+ +   +R  +  GTPEY+APE++   GHG+ VD WALGILI+E+L G+ PF   +   +YE+I +G  +FP
Sbjct:    2 VKSDHVQPNPVSLKDFELVDTLGTGTFGRVYLTRHILSDHFFAMKVLKKSEVVRLKQ-VEHINSEKAILSAIRFP-FIVNLLCTFQDEKNLYMLLEYVPGGELFSHLRKAGRFPNDVARFYAAQIVLAIEYLHNQDIVYRDLKPENLLIDQNGNIRITDFGFAKIVE--DRTWTLCGTPEYLAPEIIQSKGHGRAVDWWALGILIFEMLAGYPPFFDDNPFGIYEKILAGKISFP 232          
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: A0A1Q9CC87_SYMMI (Prkaca protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CC87_SYMMI)

HSP 1 Score: 179 bits (453), Expect = 3.640e-46
Identity = 97/239 (40.59%), Postives = 140/239 (58.58%), Query Frame = 1
Query:  580 LAPLELRVEDFECGDCIGKGSYSRVFLGTHMPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFPPPLSKASPS 1296
            L+  +L V DF  G  +G G++ RV   TH  SG  +ALK + K    + ++ + H+  EK+I +KLQ   F+V   G+F +PR +   +EY+ GG+ +  L   G     +++ + AQ     E  H L+IV+RD+KPEN L+   G +KLTDFGFA+ +    R  +  GTPEY+APEVL   GHGKPVD W LGILIYE++VG+ PF       +Y++I +G   FP    K + S
Sbjct:    9 LSGEKLSVSDFSLGKTLGTGAFGRVRFVTHKSSGRHYALKTLKKAAIIKMKQ-VDHIMSEKQILAKLQHP-FIVNMFGSFHDPRYIYMVLEYIVGGEFFTHLRKAGRFDNEQSLFYAAQITCIFEYCHELNIVYRDLKPENILINADGYVKLTDFGFAKVIE--HRTYTLCGTPEYIAPEVLLNKGHGKPVDWWTLGILIYEMIVGYPPFVDEDPMGIYQKILAGKITFPKIFHKEAKS 243          
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: A0A812UTP6_9DINO (Prkaca protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812UTP6_9DINO)

HSP 1 Score: 179 bits (453), Expect = 3.640e-46
Identity = 97/239 (40.59%), Postives = 140/239 (58.58%), Query Frame = 1
Query:  580 LAPLELRVEDFECGDCIGKGSYSRVFLGTHMPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFPPPLSKASPS 1296
            L+  +L V DF  G  +G G++ RV   TH  SG  +ALK + K    + ++ + H+  EK+I +KLQ   F+V   G+F +PR +   +EY+ GG+ +  L   G     +++ + AQ     E  H L+IV+RD+KPEN L+   G +KLTDFGFA+ +    R  +  GTPEY+APEVL   GHGKPVD W LGILIYE++VG+ PF       +Y++I +G   FP    K + S
Sbjct:    9 LSGEKLAVSDFSLGKTLGTGAFGRVRFVTHKSSGRHYALKTLKKAAIIKMKQ-VDHIMSEKQILAKLQHP-FIVNMFGSFHDPRYIYMVLEYIVGGEFFTHLRKAGRFDNEQSLFYAAQITCIFEYCHELNIVYRDLKPENILINADGYVKLTDFGFAKVIE--HRTYTLCGTPEYIAPEVLLNKGHGKPVDWWTLGILIYEMIVGYPPFVDEDPMGIYQKILAGKITFPKIFHKEAKS 243          
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: A0A830HWE6_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HWE6_9CHLO)

HSP 1 Score: 179 bits (453), Expect = 4.050e-46
Identity = 99/237 (41.77%), Postives = 141/237 (59.49%), Query Frame = 1
Query:  580 LAPLELRVEDFECGDCIGKGSYSRVFLGTHMPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFPPPLSKAS 1290
            L P +L   DF  G  +G GS+ RV LGTH  +G   A+K +SK +  +T++ + H++ EK I  ++ +  FLV   G FQ+P  V   +EY+ GG+ +  L   G      +  + A+ VL+ E LH  DIV+RD+KPEN L+   G LK+TDFGFA+++    R  +  GTP+Y+APE++   GHGKPVD WALG+L YE+L G+ PF        Y+RI  G   FP   S+AS
Sbjct:   12 LNPCKL--SDFNIGPILGTGSFGRVPLGTHKSTGKVCAIKQLSKSQILKTKQ-VQHIKAEKAILEQM-NFPFLVAMYGYFQDPECVYLVLEYIVGGEFFTHLRSAGRFSEDASRFYSAEVVLSFEYLHGNDIVYRDLKPENILLDSEGHLKVTDFGFAKQIE--HRTYTLCGTPDYLAPEIILNKGHGKPVDWWALGVLCYEMLAGYPPFYDDDPMGTYQRILHGKLEFPSHFSRAS 242          
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: A0A0L0DN52_THETB (AGC/PKA protein kinase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DN52_THETB)

HSP 1 Score: 179 bits (454), Expect = 1.560e-45
Identity = 92/234 (39.32%), Postives = 146/234 (62.39%), Query Frame = 1
Query:  589 LELRVEDFECGDCIGKGSYSRVFLGTHMPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFPPPLSKAS 1290
             EL + +F+    IG G++ RV+L  HM +   +A+KV+ K +    ++ + H+  EK I S +    F+V   G  Q+ +++   +EY+ GG+++  L   G  P   T  + A+ VLA+E +H+LDI++RD+KPEN L+  +G +K+TDFGFA+++   +R  +  GTPEY+APE++   GHGK VD WALGIL+YE+L G+ PF + +   +YE I +G  AFP  L  A+
Sbjct:   79 FELNIAEFDLISTIGTGTFGRVYLARHMTTSKYYAMKVLKKVEVVRLKQ-VEHITSEKNILSVIHHP-FIVNLFGATQDAKNLYMLLEYVIGGEVFTHLRRAGKFPPDVTKFYTAEIVLALEYMHSLDIIYRDLKPENLLLDSNGHIKITDFGFAKKVE--DRTWTLCGTPEYLAPEIIQSKGHGKAVDWWALGILVYEMLCGYPPFFSDNPFSIYEAILAGKIAFPSHLDSAA 308          
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: A0A6S9HA20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HA20_HETAK)

HSP 1 Score: 177 bits (448), Expect = 1.950e-45
Identity = 93/228 (40.79%), Postives = 140/228 (61.40%), Query Frame = 1
Query:  586 PLELRVEDFECGDCIGKGSYSRVFLGTHMPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFP 1269
            P  L ++DF+ G  +G GS+ RV   TH  +G+ WALK++ K      ++ + H+  EK I SKL +  F+VR AG FQ+P+ +   +EY+ GG+ +  L   G      +  + AQ V   E LH+LD+++RD+KPEN L+ ++G  K+TDFGFA+++A   +  +  GTPEY+APEVL   GHGK VD W LGIL++E+L G  PF       +Y++I +G   +P
Sbjct:   15 PQPLSLDDFDLGVTLGTGSFGRVRFITHKATGSYWALKMLKKELVVRLQQ-VEHIMSEKNILSKL-AHPFIVRFAGGFQDPKYLYMVLEYIIGGEFFSHLRRTGRFDNSASCFYSAQIVCVFEYLHSLDVIYRDLKPENLLLDQTGHFKITDFGFAKKVA--FKTYTLCGTPEYIAPEVLLNKGHGKGVDWWTLGILMFEMLSGQPPFVDNDPMGIYQKILAGKITWP 238          
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: A0A6U1MVM7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MVM7_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.950e-45
Identity = 95/240 (39.58%), Postives = 142/240 (59.17%), Query Frame = 1
Query:  550 KNHQRIRPKYLAPLELRVEDFECGDCIGKGSYSRVFLGTHMPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFP 1269
            + H++       P  L ++DFE G  +G GS+ RV   TH  +GT WA+K++ K      ++ + H+  EK I  KL S  F+V+ AG FQ+ + +  A+EY+ GG+ +  L   G         + +Q +L  E LH LDI++RD+KPEN L+ ++G  K+TDFGFA+++A   +  +  GTPEY+APEVL   GHGK VD W LGIL++E+L G  PF       +Y++I SG   +P
Sbjct:    3 EEHKQDESTLALPQPLSMDDFELGVTLGTGSFGRVRFVTHKATGTYWAMKMLKKELVVRLQQ-VEHILSEKNILCKL-SHPFVVKYAGGFQDAKYLYMALEYIIGGEFFSHLRRTGRFDNNAARFYASQILLVFEYLHGLDIIYRDLKPENLLLDQTGHFKITDFGFAKKVA--FKTYTLCGTPEYIAPEVLLNKGHGKGVDWWTLGILMFEMLAGQPPFVDNDPMGIYQKILSGKINWP 238          
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Match: A0A6U4Y6L6_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6U4Y6L6_HEMAN)

HSP 1 Score: 177 bits (449), Expect = 2.060e-45
Identity = 94/223 (42.15%), Postives = 141/223 (63.23%), Query Frame = 1
Query:  601 VEDFECGDCIGKGSYSRVFLGTHMPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTFQNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHALDIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPEVLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFP 1269
            ++DFE  D +G G++ RV L  H  SG+ +ALK++ K +    ++ + H+  EK+I S L    F+VR AG+FQ+ R +   +E + GG+L+  L   G      T  +  Q VLA++ LH  DIV+RD+KPEN L+ + G +K+TDFGFA+E++  +R  +  GTPEY+APE++   GHGK VD WALGILIYE+L G+ PF   +   +Y++I  G   +P
Sbjct:   31 LQDFELQDTLGTGTFGRVRLARHKASGSFYALKILKKSEVVRLKQ-VEHVLSEKQILSGLLHP-FIVRLAGSFQDTRCLYMVLELVIGGELFSHLRKAGRFSNETTRVFAGQIVLAMQHLHGQDIVYRDLKPENLLLDEKGYIKITDFGFAKEVS--DRTWTLCGTPEYLAPEIIQSKGHGKAVDWWALGILIYEMLAGYPPFFDENPFGIYQKILLGRVDYP 249          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.26.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFW9_9PHAE5.410e-13060.80Protein kinase domain-containing protein n=2 Tax=E... [more]
E1Z5I2_CHLVA2.490e-4742.39Protein kinase domain-containing protein n=1 Tax=C... [more]
A0A507D6J9_9FUNG2.010e-4639.57Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
A0A1Q9CC87_SYMMI3.640e-4640.59Prkaca protein n=5 Tax=Symbiodinium TaxID=2949 Rep... [more]
A0A812UTP6_9DINO3.640e-4640.59Prkaca protein n=2 Tax=Symbiodinium TaxID=2949 Rep... [more]
A0A830HWE6_9CHLO4.050e-4641.77Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A0L0DN52_THETB1.560e-4539.32AGC/PKA protein kinase n=1 Tax=Thecamonas trahens ... [more]
A0A6S9HA20_HETAK1.950e-4540.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U1MVM7_9STRA1.950e-4539.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U4Y6L6_HEMAN2.060e-4542.15Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:309214..327413 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog296587.XP_002507865.1
PFAMsPkinase
Model size2940
Max annot lvl2759|Eukaryota
KEGG koko:K04345,ko:K19584,ko:K19800
KEGG Pathwayko01522,ko04010,ko04014,ko04020,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05146,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05414,map01522,map04010,map04014,map04020,map04024,map04062,map04113,map04114,map04138,map04140,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05146,map05165,map05166,map05169,map05200,map05203,map05205,map05414
KEGG ModuleM00695
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.59e-44
EggNOG OGsKOG0616@1|root,KOG0616@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-20_000540.1
EC2.7.11.1,2.7.11.11
DescriptioncAMP-dependent protein kinase activity
Cds size1062
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866485.982578-UTR-A-nodosum_M_contig11:309213..3098821680866485.982578-UTR-A-nodosum_M_contig11:309213..309882Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11 309214..309882 +
1680866486.026269-UTR-A-nodosum_M_contig11:326204..3274131680866486.026269-UTR-A-nodosum_M_contig11:326204..327413Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11 326205..327413 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866485.999186-CDS-A-nodosum_M_contig11:309882..3100461680866485.999186-CDS-A-nodosum_M_contig11:309882..310046Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 309883..310046 +
1680866486.0080721-CDS-A-nodosum_M_contig11:312221..3123851680866486.0080721-CDS-A-nodosum_M_contig11:312221..312385Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 312222..312385 +
1680866486.018522-CDS-A-nodosum_M_contig11:325470..3262041680866486.018522-CDS-A-nodosum_M_contig11:325470..326204Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 325471..326204 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.26.2prot_A-nodosum_M_contig11.26.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig11 309883..326204 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig11.26.2

>prot_A-nodosum_M_contig11.26.2 ID=prot_A-nodosum_M_contig11.26.2|Name=mRNA_A-nodosum_M_contig11.26.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=354bp
MPSGTEWALKVVSKRKTFETRENLAHLREEKKISSKLQSSDFLVRTAGTF
QNPRSVVFAMEYLPGGDLYQRLADKGTLPLGETVAWVAQAVLAIEDLHAL
DIVHRDVKPENFLMGKSGTLKLTDFGFARELAPGERLLSQFGTPEYVAPE
VLNGCGHGKPVDLWALGILIYELLVGHTPFKAASVDDMYERISSGDYAFP
PPLSKASPSPIPSPTRSRRQDIRSKRGSSSNKRSEAEAEGKGGRLEGYPN
KVVEKKEEIDDAQDPAAQSLVKSLLSLAPARRPSIAEIKDHPFFEGVNFD
ALRAAVRAQAYAEEEEALVAAAVAGGDVWLRDQPVICLSENVDDHYGNVF
ADF*
back to top

mRNA from alignment at A-nodosum_M_contig11:309214..327413+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig11.26.2 ID=mRNA_A-nodosum_M_contig11.26.2|Name=mRNA_A-nodosum_M_contig11.26.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=18200bp|location=Sequence derived from alignment at A-nodosum_M_contig11:309214..327413+ (Ascophyllum nodosum dioecious)
AGTAGTAGCAGTAGTAGCAGCCGCACCAGCGGGGGCAGCCCGCCGAGCAA AGAGCTCGCACGTCCTGCGGGTGGCAACACTAAGAACGGCGACGGCAAGA GCAATGCAAACGTACACCGGCGGAATCGGAGGCCACGTTTGCGTCGCCAG AATGGGCAAGACTTCGACCATTCAGTGGAGAAGTCGCGCGTTTCCACACC AGCCCGATCCTCCAGCGACTTGTTCGGTTCGGGCTTTACGGAGGCTCCAA GCTCGGCCAGCTCGGCCAGCTCACGAGGTCAGTCGAAAGTATGTTGTGCG TGCAGTCCAAGCGTGAGTATAGTAGAGGACCTTCCGGGAGAAGTGTCGGA AGATGACTTCTCGTGGCTTGAAGCAGAGCCTGCGGTATCTGTAGCACCAT CTGCTGCGGTGGACGAGGCGGATTTTTCTTGTGGAGATGCTCACAAGGAT GGACCTAGTATTTCTAGGAAGGAGAAGAAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCCACGCCAGCAGCAACAGCAGCCACGCCGGCATA AGAATCATCAGCGGATCAGGCCCAAGTACCTCGCTCCGCTTGAGCTCAGA GTCGAAGACTTCGAATGCGGTGACTGCATTGGCAAGGGCTCGTACAGCCG CGTGTTCCTGGGGACGCATATGCCGTCCGGAACCGAGTGGGCGTTGAAGG TGGTGTCCAAGCGGAAAACGTTCGAGACAAGAGAGAATCTTGCGCATTTA AGGGAGGAGAAAAAAATTTCGTCCAAGTTGCAGAGCAGCGATTTCCTCGT GCGTACGGCGGGGACGTTTCAGAACCCTCGAAGGTGAGAACACCTGCCTA GGGCGTCGCCCGAGAAGGCCGGAACACGACGGATTGCAGCGCCGGGTGTT ACGACTATCGCTGTAAAATGGACCACCAGGTTTTAAATAACTCATCCATT TGTCCGACGATGCGAGCCAGTCGCGATTAGGCTGGTGTAGCATTCGGTTA TAAAATTTTGCCTCAGGAGCACTAGAATGACGAATTACGGCTCTTTCCCA TTTCATCCTTTAAAACTAATACATTAGCTCTATAGAATTAAATTGCGCAT GTTTTCTCAACTGGAGATGGCGGGAGTCTTGCATCTTGCGTGTTGCAGTA ATGTACAAGCAGAACAGATTCTCCGCCACAGTCAGCTCTGTGTATCTGCG GGGAGAGCATCACCCCGATAATCGAAAGGCCACGCGGCCTAATCACCCTT TGAGCTCTCCATTCTCCCCAGTCGAAGCTGTCGGTCTGGACCCTCTCATC ACCGGTAGATTCGGATCTCATGGTGTGTATGTACAGTAGCTAGGGCCACG CAAGTTAAACAAAGGTAAACGATAGACCCAAACCAGCAAGGTAAACGATA GACCCAAACCAGCTCTCCGCATAGAAGCGAGTGCTAGTTTTTAATTTTTA TTTTGTCAACTGTATACGAACAAGATAGTTGTAGACTACTAAGGTGCGGC CAAGCCAACTTCGCAAACATAAGCTCTCGCCCCGGTTATCTTATCGCTAC TATACAACAGTAGTACGCCCAGAATTTTTCCGGCTGGAGTCAAACTTTTC AAGAGTTTGTCGATGAATTTGTCGATATCAGTAGCCGGTGCGAGCATCTG TTTTTGTTTGAAGAAATAGTTTGGTACAGACCTGAAAGGACACAGAAAGA GTGGCGCGCTTTCCCCTCTGCCGTTGCTTTCACAGCAGCCCGATGCCGAG GTCTTTGAAACTAAAATATTTGGCGCACAACTCATGGAGATAGACGCCAA GCGGACCAAGGCGAACTGTATTTTCTATTTTCATCTTCGACCTTCTTTGT GACCTTTGTGGTTGAATTTGGTTATGGAATTTCGCACAGGACTAGTATAG TACGTGGTGTAAACTATACATGCCGACTCAGATGGTTGTGTGCTGTAAAA TCTGCAACACTGCCGTCTCTACAACAGTAGTGAGCCGCCAACTTGAAGGT TATTTCATTTGATTACTAATATACCTGTGTAGCCCTTCAACAGTAGTATT TATAGTATAAAGGAAGCAGCCCATAGACTAATATTACAGCACGCGACGAT GTGTACAGCAACCTTAGTTCTGAGTAGTCAGATAGTGTACTGAAAAGTAG GTTTACAGATGGCTTGTCGTTTACCTCCTCCATCGATGCGAGCCCTTGAA GTGCGAAGAGGATATTCATACATAAATAAGCCTATTACAAATAGCTGTTG GTAGCAGGACAACACACGGTCTCAGGACAATACTGATATTTATGGTATGT ATCACGAACAACGACAGACCACCATTGATAATAAATAAAAAATATACTCT TCCAAGAGAGCTCCGGTGGTCGCCATGCTTTTATGTGGAGTTTATTTTCT CAGTCGGTATACGTGGGTAAACTACTTAACTGTATCACCGAACATATCGA GCTTCTTTCGGGACCTACCCTACACCGATGCTGCCCTGGCCAAGGCTCCC GCCGTCTTTTCCCGCCTTATGATCGCGGGGATACTGTAGTTGCGCACCAA AGCGCCATGCACCGACGGAAATACCAGTAGATAATCTCTTCGTCCCCACT CCGCCCGAGATGTTGAAATTTTTATCCACTTCAAGTAGCCGAACGTTTTT GGCGATGTTTTACCCGTACATATTAGTCTCTAGTCTTCTAGAACTGATTT GTATTGGGCACTTTACGGTGGTACCCGCTAGCTCGGTCGCTCTTGTCGGA GACTCCAAAATAATCAGAAAAGTTTGTATAATACTTGGAAATGTGGTTGA CGAGGTAGTCTACAGGTAGATAATAACTTGGGTTGCGATTGGGTCGCGAT AATGAAAAAGCTTTTAGACGTGAACCGGTGTTGTTCCAAAGGGGAGGCTA AGGCTATCTTTTTTAACTGAGTATCGTGTTTCAGTATCTCGTTATGCTAT TAAAAGTGCTACTACTTAATTGTTGACGCTATTACCGCACACGGACATGC CCTCGCAGCGTGGTATTCGCCATGGAGTATCTACCCGGCGGAGATCTGTA CCAACGACTAGCGGATAAAGGAACCCTTCCTCTGGGTGAGACGGTGGCGT GGGTAGCCCAGGCAGTCCTAGCGATTGAAGACCTCCACGCCCTAGACATC GTTCATCGCGATGTCAAGCCAGGTACGATACGGTATCTCTATACGAGTGT GTAGATTGGTGCGCGAATTCGGCAGTACTAGACTACTGTGTAGGAGTTCA GCTAACTAACGTGTACTACTGTACTAACGTATGAATAGTAAGAATTGCTA ACTTCTGTCGTTGAAAAGGGGAAGTTCTCATTTACAGCAGATTAGGTGAT TCTTACTTCTACTCCTTCTATTATTAATATTATCAATAGTTTTCACCACC AAAGCTTGGGCGTAAAGAGAAATAAATAAATGTGAAGGCATCTTAACCTT CCACGAGTTAGCGTCCGCCCAAATGTTGAGGAGGTGACGTAGGCGTGCGT AGCAAGTACTAAACTCCTTGGGATTTAATCGTGTTCCCGAATGGATTGCG GCTTGAGAGCGGTACAACTTGTTAAGGACTCGTAGTACTTAATTACTGCA GTATTATTTAGAGAAAAATCTGAACTAACGCATGTCAACCTTCTGAGCAT TTCACCCAATCAGGGTGGAAAATTCAAAACGTTTAGGTGGGAACATACTA AAAAAAACTCTTCCATGGCGTTTAATCGGGTTCCTCGTTGGTAGTAGCAA AGGGTTAACGGTATAATGTCGGGGAAAATTCCACCGTTATATTGTACACT TACACTAATCTCCACGCAGGTGTGTAAATATATAACGGTGGGCTTCTCCC CGACATTATACTGTTGACCCAATGTTACTACCATAGGGGAACTCGTGTAA ATACCATGAAGAGGTTTTGTCCCTGCAGCCTATTATGGTCCCACCTAAGC GTTCTGACATTTTTCATTTTTCCCCCTGACTGGGGGATGCCCAGAAGGTC TAGATGCGTGCAGATTTATCTTTAAAAAACAGTATAATACTAACTTGTAG CTCTAGTTTGGCTAAACATTATAGTAAATGCGGAAGATACATAATACGAA GGACTTGTACTTTAAAGAAAAATCTGAACTGTTGTACCGGGTAGTTATTG TTACACGTAAAGAGTAGCATATGTATACAGAACAGCAAGATCATAGAGCT CGTGGTCCTAGAATCACTTGTACCACTCTGTAGCAGAGTATATCTACCAC CCAGCTATTTTGATGGTTCCCACAAAAGCCCGTGGTCAGCTGAACAGAAG GAAAAAACGGTCTCCGCTTGGGCCTGAGAATTTAGTCTCGCGAGACGAGT TCGGTCATCCCGTCCCGCGTCAGCCGGCTGAATCTGGTTCTTACTCGCGG GCTCCTCTCCTTCCTCTTAATGCCGCTTTCCGGGACGGTGTCCATCTATA CCATCAACCGCCATGGTGAGGTCCGATCGGGTCAATCCCGAATTTATCAA GTCGCATGTAATAGCGTACCGAGAGCATTCCCCGCCGAGAATCCGTCGGC GCAGGGCCAGTATAGTCCTCAACGGTCAAGGTAGTACTGTATGAAGTCTA CGAGATAGGGTATCTTTTAAACAACGGGTGGTTCTGAAACACAGCTTACC ATCAACGGTGCAGATCGTTGCGCGTACGAGGACTGCGAAATAAAATACGT ATAATAAAGCATTATTAGTACGTTCGGGTAATAAACGCAGTTGACGGGTT CTCTGTTCTAGCTCCACCACTATAGTTTATGTATTTTTTTATAGCTCCCA TCTATCCTTCATGGGCATCTACATAAAACTTTTGAATGGTCATTCATCAT GATTTTAGCACTACACCACTTGTTGTCTCAAAAATAACAATGACAAAAAC TCTTGATGGGCTTGTTAATTGATTGTTGTTTCTCACATTCATTCAGTGTG TTGGTTGCCAACCCGATATTATTTGCTCTGATCCGACTCTTACCCTCTAG AATTGAGAGAGGGAGTGGGATTATGGCATTGCTGCCTCTGTAGTCAGTAG GCAACAGTCAACGCGCTTACTACTATGTACAGCCGTAGTGGCTTGAAGCT GCTGGGTGAGACCCACCCCAAGGCGGTCCCTTCTTTTACTAAAATACCTG TTCTCTTTATTTTTTATTTTTTAGTTTAGCTCTACTGCTGTATAGGGTTT CGAGTTGTTTGATCGCTTTCAGCGATTTGGCATCCCGACACAGCACACCA TATTTATAATGACAGGTGTCAGCAGCGGTCCCCAAATGTAATGGCATGTG TTGTTATGTGTAACGTTACAAGTTGCCACAGACACCAGGAAATGACACGA CAAATTTGCCTTTCAGCGTCTTATTATGATTGTCTTTGCAGCTCAAGGAA CGAAGCGACACACACAGACTTTTTATTTTTTTCCCTGTTCAGCATACCAC CAGCGGGATTGACCACCATGTAAAGTAGTTTTTTTCGGGTTGGCAACCAA TGCGCTGAATGTGAGGAACAAACAACAAATGAAGATTCTCATCATCATGG TCCTCTGCTGTGCTCGTTTCAATTATTGTATCGGATTTGTCTTTATTTAA AGAAAAATTTGAATGCACCTAGACCTTCGGATTTGTCTTTATTGTTTGAT GATGTATTGGTTTGTCTTCCCTTTTGTTGGTGTCCCTGCATGGCGATTAA TGTAAGTGTACAGTATGACGGTGGGTTTCTCCCCGACATTATACTGTTGA CCCAATGTTATTACCATCGGGGAACCCGTTTAAATGCCATGAAAAGGTTT TGTATTTTCAGCTATTGATCCCACCTAAACGTTTTGACATTTTTTCCCCC TGACTGGGGGATGCTCAGAAGGTCTAGGTGCATTCTGATTTTTCTTTAAA CAATTAACAAATACCCTGCCAGGGATTGAACACTACGGAGTACAGTACCA GTAGTACCCGATATTATCCTGCTTCAACTCCGCCCCTAAACAGTTAACAG AAAAGCGGCATCGTAAACCTTCATCTATTTCACTTGGTTGGTCACGTATT AGGCTATTCGGGCTGAACATAACAGAGGACTACGCTCGCAGCTGCTCTCG CAGAGGATGCACTTCCCCATGCCCCATTTTTTTTTCCTTGGCAATGTGGC TGGAGTAATTGTTTTTGAACGGCAACCCCGGCTTCCTTCTAGAGCACTGG TCTGTGCCGCGTATTACTCTCTGCGAGGGTCTGAAGAAGGAGATCGTAAG AATGCTCAACTTCTCCTTTTTTTAACGTTGCGTACCAAAAAATAGCTATA GTGAGCGAGCACGCGTATGGATGTGGCCCTGACGAATAGCGCTTTCCATG ACAAGTAAAGGCCGCAGGTGTTCCCCATTGGCTACTTGATTGTGCTACTG TCGCTGTCGCTATTCTCTTGGGGACACAGCAGCAGTAGGTCTATCCTCTT TCTTCGACAGGTTTGCAGCAGTTTGTGCAGTAGCAATCAATACTCAGAAT ATGAGAAAAAATGGAAAAAACAATCCACCATCTGTCTGGTTTGTAATACG CAGTCGTATATACTCGGTGTATTTAGCTCTCGTTTTTTTCTCGTAAACTT GCGCGTGAGGGATTGGTCCGTTGGCTTGCCGTTGCCGAGAAAATGGCTAA TTATATGCGGACAGTATAGCAGTATTGGTATGATTGTGACGTCATTTTTT AGAATATGAATATTAGGGTGTTTCGACAGCGCTGCCTCCTCATCGGCGAA GTTCTACTGTCTGTATTCATTTATTTTTATTTTATATTTGCCGTCTGTAT TTTTTTTTATCAAGTTTATTCACCAGATCGATTGCCAGAGTGTCGGGGGG GTGTTTTTGTGGATCGGGCCTCGAGGTAGTACGTGGTCTGTTGGACAGGG AAAAATAAGAGGAACATCTACAAAGCTCCAACGAGGGCATGAAAACAAAA CAAAACAAAACAAAAAACGTCCAGAAAAAAACAAAAACACATGAGCACAT GCCAGAAAAAGACAGATAAAAGAAGGGCATTCGATAGAGAGAGTTGGTAT ATCGTCAGCCATGAACTTGCAACCTCAACCTTGTCCGCCTCTTCCACTTC TCTCTTCCTCTGCCGGTGTTCGGACGCCTTTTTCTCTTCCTTCACCGACG CGGCCGGCCATAAACCTACAGCGCCCTTTACGCACTGTGCTGTACCAGAC CCCATGGTCAAGTACGGCGGTGCCCCAGTCCCACGTGATGCTAAATAGCC GACGATCCTCTGCCACGCAGTCCGTCCATTATTTCTCCTTCCCCCCCCGG CCCACGTTTTCCCGCGTTCTTCAGCTCTCCAGGCATGACCCTCTTGGGTA ACCTGCGGTCACCCATGCGGAGCAGCGCCCCCAACCACAACACCATAGTT AACCCACGCCGGTACTTTCAACATGCCCACTTCATACCAATAGTGGTTGT AGGAAAGATAAACGCATATTAATTGGTCCATGGTGACCTGCCAAGGCAGC ACTCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGTCGGCGGACTCT CGGCAGTGAACGCCATCGGTACGCAATTGCGTGCCCCGATAAACTCGGGG CTGACCCGATGGCGTATGACGGTTTAAATGATTAAATGGACGCCGCCGCG GAACTCGGGAGGAATCCCGTAAGTAAGCATCAGATTCAGCCAGAGTATGG AGATGAGCAGGCTGACGCGGGACGGGACGGCTGAACCCATCTCGCGAGAC CAAATTCTCGGGCACGTACGGGGACAGGGGAATATACATTTTCCCTGTTC AGCTGACCACGAGCAGGATTGTCAAGTTTACCCGGTTGATCCATACTGTA CTGCTATATGTGATGACCATTTTCATACACATTCATCCCCAAGAGGGTCG TGTCGGGAGAGCTCGAGAACGCGGGAAAACGTGAGTCGGGGGGGAAGGAG AATTCATCGACGGACTGCGTGGCACAGGATCGTCGGCTTTTTGGCATCAC GGGGGACTGGAGCACTGCCGCGCTGCCGCACTTGACCCTGGGGTCTGGTA CATCACAGTACGTGAAGGGGGCTGTAGGTTTATGGCCGCGTGGGTGAAGG AAGAGGAAAAGGTGTCCGAACACCGGCAGAGGAAGAGAGAAGCGTATGGA TCTCAATCCTGTTTGAGGTCGCGGCTGTGGACTCGCGAGACAGATTCGTA TGTCCCAGCCCGCGTCAGTCCTTGCACGTTTGTGTTTGTGTGTGGATATA TTAAATTGGTGTGTTTTATTCACGTTCACCGATCGGGCGTCAACTATCCC CCCAGTAGTAAAATAAAAAATAAAAATTCATGCCCAACAAGTGGAGCACG ATCAATTCGTGGGTACACGAAATTCGACTTCACGGTCGACGAGGGAAAGG GACGGCTGAATCTTTCTCGCGATAAAAATGAAGGCGAGCACCGCAGAAGG AAGGGGTGGAGAAATCCTGTGTGACCCCGGCTCGTGCGTCCACAAGCCTG ACATCCAGAATAAATGGGATGACAACACACACACACTGAATAATAATATA CGCTATGGTTGTCAATCCAATCCGGTACTGTACGTGGTCTCTGGTGGACT GGAAAAGATCAGAGGAACATAATAATAAAAACAGAAACCTAAGCAAAAAC GACAAAAAAAATGGAAGGAATAAAAATAACACAAAAACAAAAGCCAGAAC GAATACATAATACGTAGGATGCAGAGACGTGCGAAGCACCCCTCGAAAGA ATAACGTATGCATGGCGATATAGATGGCGATAGCATACAGTAAGTAGTAC ACACGCGCGAACACGAAAAAGGCAAGAGCACTCGATAGAGAAGGATTGGT GTACATCGCGAGCCATCCGATGCCGTCCTGGATTGCAACTACTTCGCGCT TGCACCCACAGGCATAGAGCATCTACAAAACACCGTATTCTCGGGATTTT TCGGCTTGCCCCTCGCCGCAGCCGACGCCGTTTGTGGAACTCCTTTGGCC GATCTCTAGCAACGTGGTGCACTATCTTGAGACACAAAACACTATTTTGT CCTTTTTTTGTCGAAAACCATTCTCAAGTCTGCGTGTGGACAATACTACT AGGCTCGTGTGGGACGGGACCGCCGAACCTCTTGTCTCACGCCAAGACCA AAAATTCTCAGGCGCGGACGGGGACAGGGGAATGTTCATTTTCTCCCTGT TCGGCTGACCACGAGCAGGATTGGTAACCTTACCCGGTTGATCCATACTC TTGCGATAAGTGATCGGCCATGCATACAAACAAACACTCCAGGGTCCATG CGCGTCTCTGCGCCCATTTTTTTTTTTTTTTCGTTAAGGGGTAGTCGATT CCGCTAAACGTCCGCTTCATAGTATCTGGGATAATATCTATCAGTTGTAG ATATTTTATCGTAATAACAATGAACAAAAACCCCATCTGCTGGTCGCCCT CATCACTTTATTCAAATCTCTGATTCAAACCTTTTAGTTTTATGGTTACA TATACTTGTACCTCTTGCCTCATGTGTTTACATGCACAACCTGTAAATCC ATTATTGATACTACAAATAAATTACGCTTACTTCCATTACTTAGTTACTT TAGGCCCGTTGTAATGTGAGACATCAGTTGACATACGGTACTGTAAATTT GGAGTCCTTCACATTTATGACCTGTAGACTAAACTGCCTTCGAAGTACTA ACACCAAACCCTATTTCTCTATAGAATTATCACTGTTTCGTTTGGAACGC TTAGTCCAAAAAACTGTAAAATAACTATAATCTGCTTCTTCTGTTTTGGT GTCCATACATGGTGATTAATGTAAGTGTACAGTGTAACGGTGGGCTTCTC CCCGATATTATACTGTTGACCCTATGTGATTCCATTGGGGAACCCTTTCA ATACCATGTACCTGGTAGAGTTTTTGTCCCTACAGCCACTGTTCCCACCT AAACCTTTTGACTAATAATTGGAAGGTTTAGATGCGTTCAGATTTTTTCT AAATAATAAAGCATAGAATAACAGGCAGATCTGAACACATTTCTTCACCA CCTCATCTACAGAGCACCGTTGCTGCTGATACTCGTAGCAACATGGTACA GCTCTCATGGGGCTATCCAGCGCAAGAGGAAATACCTTATAAAAACAAAC GGCACAGTCTTGAACGAGCGACTCCCCCCACTGCTGAAGGAGTGACGAGA GACGCGTCTATAATAGCAGCCTTGTTTTTCTGTTATTTTTTGCCGTCATA GGCACCACTATATGAGCTAGTATATAGCCACGACTCTACATCCGAGAGGA ATGAATATGTCGTGTAAAATACAGTAGACCTTTCTTTCATTATTACATGT TGATAATTTTTTCCCATCTGCCCCGAGTCGGTTGGTTGTTTTGATTATTT TTGTTGGTGGATGTTGGTGCGCATGAGCCATTCCGTTTTTCCTCTCGCCA GCCGACCGCGGATCGGATTGACAGCCGCGTTCTTGTGAAGTATTACCAGG TACTGTAGGTATTTATGGTTGGGGCCCAATCGGACACAACCCTCCCTGAC CTCCACCCACATAGTTATTTTAAGTAATATTAATGTAACATAACGCGTAC AAACAGCATTATAATTGTAGGTATCACTTAAAGTCCCGCTCTGGCCTAAT TTTTTACCCAATTCATCTCTGGAATACGGTAATCGATTTAGTAGGAAAGC CTAACTTTTGATGAAAACAACAGTAAGTAAAGAGACAAAGCAGAAAAAGT TCGAAAAAATTTCACCACCAAAGAGCGGGTGTGTGGGAAAAGAGAGGCGC GCATTAATTGGTCCATAGTGATAACTGCAAAGGCAGCACCCGTCATAATA CTGGAACCACCTTGCAATCGCGTGACCTGATAATCTCGGGACTGACCCGA TGGCGGTTGGCGCTATATATTAAACAAATTGACGTCGCCAAGGGAAGCGA GAGGAATCCCGTGTATCACCAGATTCAGACTGAGTGTGGAGAAATAGTAC GGCTGGGCAGGACGGGACTACTGCCGAAACCATCTCGCGAGACCAAATTC TCAGGCGCGAACGGGGACAGGAAAAACTGATATTTCTCTGTCCCCGTTCG CGCCTGAGTAAATTTGCCAATCCTGCTCGTGGTAAGCTGAACAGGGAAAG TTCATATTTCCCTGTCCCCGTTCGCGCCTGAGAATTTGGTCTCCCGAAAT GGTTTCGGCACTAGTCCCGTCCCGCGTCAGCCTGTTCATCTCCATTCTCG GGCTGAATCTGTATCGCACACGGAAGCGTAGAAATTTGCGAAGCGATACC CATTGCCCTAGTAGTCGACGAGTCCAAGGAATCCTAACGGTAATGTACGG ATGCAAGACGAGCCGAGACCTGCGTAGCGCCTAGACATGTAGATATGTCA CGTGACTTTTATTTTATTTTTTCGAACGAGCAGCGTCGGGGGGGGGGGCG CTGCCAGACTTTCTTTTTTGTTCACCTTTCCCTGTTCAGCAGACCACGAG CGGAATTGGCCAGAGAGCGAAAAAGTAGTTTTTTCGGGTTGGCAACCCAA CAATTATTGTATCATACCTGGTACGTACGATTTTTCTTTTCTTTAAACAC TTAACGGGGCCCCACGCGTTTGGGCCGAAAAATATATATTTTGGGCACAA AATACTGATGAAACAGCCACGCGACTGTAGCTACTAGCCAATGGGAGGGA GGCCAAATGGAGCTTTATTAAAGAAAACAGAGAGAAAACTGAAGAGCCCT CTTGGGGCACATCGGATAACGGAGCAACCACGGCGCCATGGCAGCTCTGC AAGGTACATATGTGATCTTATGACTCAGGGCTATCGGCCTGGGGGGGCTT GTAGGTCATGTGGCACGATACCAAGAAAATCGTCTCGGAGCCCAGGGCTG TCCCTCGTTGTTTCTTACTATACTATTTGGACCAGAGTCATAACCCTTCA AATACCTCCTGTGACCTATGCCCCCCGGGCGAGCTCGGTGCAGGTAAGCT GCCATATCGCCGGGTGTGCATTTGTGTAGCACATGGTAAATGGTAAACAC TGCAGATAAATGTCTGAGACTAGTTGATATCTCTCTTGTGGCAATATATT TTCGAGAAAAATCCTTGGTCGGCCCGAGCCAGGTCTCCCGCCATGCAGCA GTACGAACAGAACCAGGTATGGACCGCTCTTGCGCCCGATATCGCCTCCG AGACCGCGGTTTTGCTCAGCAGACCTCCCCAACCCCTGCTGGAGCACCCT CCGAAGAGGACAACCTTCTACGTGCTACTAAGCCGAACTAAAGTACTGTA CAGGATAATATTGTACACCAGAAAGGATATCCCCGATACTGTGTAGTAGT ATACAGCAGTAAGGGAGGCAAAAGCGCGCAGGGAACGGATATGTACATAT GAATAGCTCTACTGCTGTACATGGGTGCTTGCTAACGCAAGTAGATTGTG CATCAACCATGTAAGGTTGACAATCGTAATACAGAATATTAGGGGAAAAA TACTGTTACGAGTGTCTCGAAACTACAGTACTGTACAACAACTGTGCTAT ACCAATATAGAGGACAAACTGTTCTTGATTGGAGGTATGTGCTGAGTTCA CTTGAGGCGATGTCGGCATTCAACGTTAAACATCCACCAAAATGAACGTT CAAGAGCGTGCTGTGTCTCCTTTGTTTCTCTTTTCTGCCGCTGTAGTAAC TGTATCCGAATCAAATCTTCGTATCAAAAATGCTTCTTTTTTTCTGATTT CGTCATACCGCGTCAACTAACTCGCGTTGCAACTCTTTTAGTACTTAAGT ACAAGTAGTACTTTATTAATAACACTCTGTTTACGTACTGCTTCCAATGA TTCTATGGTCGCCCCGGTAGCTCAGAGGTAACCTTGAAACCTCCTGACAC GTTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCACTGGGAAA CTAAAAAAAGAAGAAGAAAAAAGCCCAACGGGTGGAGAACAATTAAATCG TTAGTACGACTTCACGGTCGACGAGGGAAAGGAATGGCTGAATCCATCTC ACAAGATAAATTGAGGCACACACCGCAGAAAGAAGGTGGATGAGAAATCC TGTGTGAGCTTCCTCCTGTGTGACCCCGGCTGGTATGTCCAACGAACTTC TTGTTCAGAATGAATGGGAAAAACACACACACACACATAGTTCTATGCTA TGACTAATAATATTAATATCAGGCATTATTAGTTCTTAAATTACTGTATA ATTTTTATTAATCCTGTAATGTTTCAAAGGCATTACTCATTTTATGTACA TACTGTAAGTGACTTAAATTACTGTATAATTTTTATTGGGAAACAAGGCG ATCCTGTAATGTTTCAAAGCTCCTGTTCTGTACTGTACTCATTTTACTAT AACACTACATACTGTAAGTATGTACATACAGATTTTTCTTACCCTGCTGC TACTGCTGTAGCAACAACAGTAGTACTGCTACATACAGTGGACGCCTTCG ATATGATACTGTACTTTCTATATCGCGCATGACACTTCCTACCAGTGGTG GGTGTCGGGAAAGAGAGGTACACATTCATTGGCCCATGGTGAAACCTGAA CAAGCAGAACCTGTTAGTGAAACCACCTTGAGGACCACCGGCCCTGTGCC GGCGGAATCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCTGAT AAAACCCGGGACCGACCCGATGGCGGTTGGCTACATAAGTAAATGGACGC CGCTCCGGAATTGTTCACTTTCCCTGTGTTCAGCTGACTACGAGCAGGAT TGGCAACCTTTCCCGTTTGATCCATACTCTGCTTATAATGATTGATGACC ATAAATACATACTGTACATACTACCACCTGTAGACACATACGTACATACT CCACAGAGATAAACGGACACACTACTTAATCCCTTTCTTGTCCGTTCTCT CCTGTATGCTTTCCCTAAATTGTTCCCGATTTGGTTTGGTTCGGTTCCGT ATATCCAAGGTGATAACGGCTGGATTCGTACCGGATCAGTTATTGTGAGA TCATTTTTCTTTAAACACCATGCTAATAATAGATACAATGGTCGCCCCCG TAGCTCAGAGGTACCTCGTAACCCTCTTGACACGTTGGGACGTGAGTTCG ATCCCCGCAAACGGGATTTTTCTCACTGAAAACCTGAAGAACAAAAATAA AAATGCCCAACGGGTGGAGAACGATTAAATCGCTAGTACACAAAATTCCA CTTCCCGGTGAACGAGGGAAAGGAATGGCCGAATCCTCCTCGCGAGAAAA ATTAAGGCACGCACCGCAGAAAGAAGGTGGATGAGAAATCCTGTGTGACC CCGGCTGGTAGGTCCAATGAACTTGATGTCCAGAATGAACGGGAAGAAAA CACACACACGAAACACATACGGGCCTCTCCGCTAGATTACTACTAGGCTA GTACTCTAGAATTGTACGGTATTGTACAATATATACTTTTTAATATATAA TACGACTAAATGACTGAAGTTGGTCGGCTAGACGCCTTTCCACGTTCAAC AGACAACGAGCGGATTTATTATACGATTAGCTCGTCTAGCCATCGTTTTT TCAGTTGGAAAACCAATACGCTGCATGCGAGAAACAATCATTTTAATTAT AGTACAGTAAGTAGTATATGGAGGACTATAAATAGCGCGTAGGTTGAGGC CCGATCGGTGAATGTGAATAACACACACGCACACACCAGTCTCTGTACGT GTATAGAGCTGCTTTAGTAGCAGTGCGTTGGTTGACGTACCTCGTAACAA GTAATCCTCCACCCAGGCAATAACGTCCAGTCAACGGATAGGACGGATGA TTCAGCAAGCAGTAGTTGTAGCCAAACCCAAGCACAAAAATATGATCGTT CTCTGTAGCGCTCGGTAGTTTTACTTGTAGTCCATACTGCCTGATGTTTG CCATCTTGTAACCACGTTCAGTAGTACTGGATGATTTATTATATTGAGTG GAAAACTCAATTCAAGACCCTACGTGTTTAAAGAAAAATCTGAACGCATC TAAGCCTTATATTCTCATGAGTCAAAAGTTTTGGGTGGGGAACAGAGACA AAAAAAGCTCTCTTAATAGATGGTATATATTAAAAGGGTTCCCCAATGTC GTCACAGAGGGTCAACAGGTAGAGTATGTCGCGTTTCACAACGAACCTCG GGTACAGTAGTAATCTAAGAAAAATCTGAACGCATCTAAACCTTCCAAAT AGTCGAAAGGTTTAGGTGGGAACATTGGCTGTAGGGACAAAAACTCTACA TGGTATGAAAAGGGTTCCCCAATGGAGTCACATAGGGTCAACAGTATAAT ATCGGGGAGAAGCCCACCGTTACACTGTACACTTACATTAATCACCACGT AGGGACACCAAAACAGAAGCAGACTATACTACTTATTTATTTGAAAAAAT GGAAGGTGTTCAATCTCTCCGAGGATCGACACCGCCAAAGGGATTGGTGT TGAAACCGTTTGGCTGGAAACATTGGCGGCTGTCAGGGCACAGAAACTCT ACAGTACTTCAAGGAGAGTCACACATTACGGTCAACGCGGTGTAAGAACA AGCAGAGTAAAATACAGTGTATACTTTTACAGTATGTCAATTTCTGCCGA AAGCCCCAATCACTGCGCCATTGATGGGTTACTAATCCCACCCCTCAGCG ACGTTGCCATTCTGCCTGCGACCACAGTCAAGAAATACTATAAATTAATA TGTATTATTCAGAATACTAGTACTATATATAGCAGTGGTGGTTTCGCCGT CTCTCCCTCGTTCTTTTATTGCAATTGAATTTTTTTGTCACGGTGAGAGC GCAGCACCCTTAGGTCTACACCTCGTTAGCTTGTATCATGGCTAAACCTA TCTTATTTCCTTGGAGCGTACTCGCGCTCTGAACGCTTTCCGCTGCAGAA ACCAGAGTAAAAACGGATGATCCAGCCATGGTTCGAACTCTCGCTAAAAC CTCACTACAATAACGTAATAATGAATTGGGAGGTTATCCACTAGTAGGCA TACTCAAACCACTCGGTCGACGAGTAATAATGCATGTTGCTGTCTTAAAG GTGTTGAGCTATTTGTACAAGTATTTTGGCACAGATTTTGTACCATGTTG TCTTGAGCTTTTCTCGGCATATATTGACAAGGCTTCCCCACAACAGTTTT AACCTTACCCACCTGACCCTTGGCAACCTTGACTGCTCCTCGTCAACGCC AAAACAGAGAACTTCCTCATGGGCAAGTCCGGCACGCTGAAGCTCACAGA CTTCGGCTTCGCGCGGGAGCTCGCCCCGGGAGAACGCCTCCTTTCTCAGT TCGGCACCCCAGAGTACGTTGCGCCCGAGGTGCTGAACGGCTGCGGCCAC GGCAAGCCGGTCGACCTCTGGGCCCTTGGCATCCTGATTTACGAGCTACT GGTCGGCCACACGCCATTCAAGGCCGCTAGCGTTGACGACATGTACGAGA GGATCTCGTCGGGCGACTACGCCTTCCCGCCGCCCCTTTCGAAAGCGTCC CCGTCTCCGATCCCGTCTCCGACAAGGTCGCGGCGTCAAGACATTCGGAG CAAGAGAGGGTCTTCTTCAAACAAGAGAAGCGAAGCTGAAGCCGAGGGTA AAGGGGGGAGGCTTGAAGGTTATCCGAACAAGGTCGTGGAAAAAAAGGAG GAGATCGACGACGCCCAGGACCCAGCCGCGCAGTCGCTCGTGAAGAGCCT GCTCAGTCTGGCCCCGGCTCGTCGTCCGAGCATAGCCGAGATCAAGGATC ACCCGTTCTTCGAGGGCGTAAACTTCGATGCCCTGCGGGCGGCGGTCAGG GCGCAGGCGTACGCAGAAGAGGAGGAGGCTCTCGTGGCCGCCGCTGTCGC CGGAGGAGACGTGTGGCTCCGCGATCAACCCGTAATCTGTCTCTCCGAGA ACGTGGACGATCACTACGGCAACGTCTTCGCTGACTTCTGAGCGCGATTT TTCTTCCTCCGGCGTGGCGGGAAGTACGGCACTTGTACTTGAGTATAGTA TTGTAATGAACAAATTACATATACCCGCGTGGTATGGGCTGGACGCGCTG TTGTCCGTCGGATGTTGGACAGAGGGGAGGGGGTAGAGAAGAAGAGACGT ACAGGGTGTAAAAACTGCTTTTCAAGACCTCAACCTTTCGATGCGACCTG AGCTGGATCATGTGAGGGGGTGTGACATGCATGACGATGGCGTTTCTCCA GCTCTTCGCTAGCTCTGTTCTCGGGATAGAGAGATACGCGCTGCGGCGGT CCCGGCCCATGTAAATAGAGTTGACAACCCACAAGTACGAGTAAAAATAA TAAGTGAACAAGTACGCCTGGTAGTGGAAATCAAGTTGGCACCGCCGCGA GAAGAAAGCGGGTCACTTGATGTGATTACCAGGCCTGCCATAGACTTTGG TAACGTCATAACGCCTCTGGTAACGTCTTAACGCCTTTGGTGACGTCATA ACGCCTTTGGTGACGTCATAACGCCTTTGGTAACGTCGTAACGCATTTGG TAACGTCATAACGCCTTTGGTAACGTCGTAACGCCTTTGGTAACGTCATA ACGCCTTTGGTAACGTCATAACGCCTTCGGTAACGTCGTGACGCCTTTGG CAACGTCATAACGCCTTTGAGGAAGGATGAGGGGGAAGAGGTCTCCCGAG AGGGGGAGGTGACTCTATGCTTTGATTATGTTTCGGGGTTGTAATGGATG TGGACGCGGCAGGCGTTAAGGCGAGCAGAGGAGCGACCCCAACCCGAGTG CACCCCCGGATGGCCTTGAACGGGGTAGACAGGCGAAAAACTATTGCCAC CTACATAAAGGTTTCATTACAGCACCGTCGGTGTAGCGGTACACAGTAGA AGAGAGTCTAGCAGTAAGCAGCTCTGGTGTAGGATAAGAGAAGTCTTGAC TTCAGCTTGTGGTTTGCGACCCTCGTGTTCTTACGATGGCCCCGGGTTGG CGCTTAAACAGGGCACGTAATAGCCACGCCTTCGAGCTGCAAACAGTCAG AACCTTAGCGGGACTCCTCCTTCTTTTTGATTTATTTTTTCGACGGCAGT CGTATAATCTATTTTTCGGTGGCAGTCGTGCATTTTCCGGTCCGTTTGAT TCAGTTCAAACAGCCTTAACCGAGTGAGATCCGGATCGGGGAAGCGATTG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig11:309214..327413+

>mRNA_A-nodosum_M_contig11.26.2 ID=mRNA_A-nodosum_M_contig11.26.2|Name=mRNA_A-nodosum_M_contig11.26.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1062bp|location=Sequence derived from alignment at A-nodosum_M_contig11:309214..327413+ (Ascophyllum nodosum dioecious)
ATGCCGTCCGGAACCGAGTGGGCGTTGAAGGTGGTGTCCAAGCGGAAAAC
GTTCGAGACAAGAGAGAATCTTGCGCATTTAAGGGAGGAGAAAAAAATTT
CGTCCAAGTTGCAGAGCAGCGATTTCCTCGTGCGTACGGCGGGGACGTTT
CAGAACCCTCGAAGCGTGGTATTCGCCATGGAGTATCTACCCGGCGGAGA
TCTGTACCAACGACTAGCGGATAAAGGAACCCTTCCTCTGGGTGAGACGG
TGGCGTGGGTAGCCCAGGCAGTCCTAGCGATTGAAGACCTCCACGCCCTA
GACATCGTTCATCGCGATGTCAAGCCAGAGAACTTCCTCATGGGCAAGTC
CGGCACGCTGAAGCTCACAGACTTCGGCTTCGCGCGGGAGCTCGCCCCGG
GAGAACGCCTCCTTTCTCAGTTCGGCACCCCAGAGTACGTTGCGCCCGAG
GTGCTGAACGGCTGCGGCCACGGCAAGCCGGTCGACCTCTGGGCCCTTGG
CATCCTGATTTACGAGCTACTGGTCGGCCACACGCCATTCAAGGCCGCTA
GCGTTGACGACATGTACGAGAGGATCTCGTCGGGCGACTACGCCTTCCCG
CCGCCCCTTTCGAAAGCGTCCCCGTCTCCGATCCCGTCTCCGACAAGGTC
GCGGCGTCAAGACATTCGGAGCAAGAGAGGGTCTTCTTCAAACAAGAGAA
GCGAAGCTGAAGCCGAGGGTAAAGGGGGGAGGCTTGAAGGTTATCCGAAC
AAGGTCGTGGAAAAAAAGGAGGAGATCGACGACGCCCAGGACCCAGCCGC
GCAGTCGCTCGTGAAGAGCCTGCTCAGTCTGGCCCCGGCTCGTCGTCCGA
GCATAGCCGAGATCAAGGATCACCCGTTCTTCGAGGGCGTAAACTTCGAT
GCCCTGCGGGCGGCGGTCAGGGCGCAGGCGTACGCAGAAGAGGAGGAGGC
TCTCGTGGCCGCCGCTGTCGCCGGAGGAGACGTGTGGCTCCGCGATCAAC
CCGTAATCTGTCTCTCCGAGAACGTGGACGATCACTACGGCAACGTCTTC
GCTGACTTCTGA
back to top