mRNA_A-nodosum_M_contig11.114.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A6H5JEL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL4_9PHAE) HSP 1 Score: 360 bits (923), Expect = 4.250e-112 Identity = 172/262 (65.65%), Postives = 210/262 (80.15%), Query Frame = 2
Query: 53 YEHHMPNRPLGSLLNSTTDLAGRVINTALKGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVIFITSLEVILVGFLY 838
++H +P PL SL+ S T L R + A+ GLQY+L+FEA+LLSA ILYGALYW+VMPL LHDKP+ +YS T G AT TVDF A HTQWDP PL +ER K+L AGQHY+VGLEL MPTS +NR+VGVFMVHT L+D+QDN LA+SARPAMLPHTS L K + M FAWPL+L GL++E ETI++ C+D+Y+E+A PLTKA+VTV+SGRVQ Y +SI+ITPQLKGLPWLMHD+FYST AAGV+FI SLE++L GF Y
Sbjct: 65 HQHQLPPGPLASLVESMTMLVNRAVAAAVTGLQYLLLFEAVLLSAVILYGALYWLVMPLRLHDKPIFLDYSDRATTGGATGTVDFLARHTQWDPSPLTNVERLNTKVLNAGQHYKVGLELQMPTSYINRRVGVFMVHTTLLDEQDNELASSARPAMLPHTSALRKGVGMMFAWPLHLAGLRREEETIYVDCIDYYEENALHPLTKARVTVSSGRVQFYSSSINITPQLKGLPWLMHDFFYSTLAAGVLFIASLELMLFGFCY 326
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: D7G4V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V6_ECTSI) HSP 1 Score: 291 bits (745), Expect = 9.890e-91 Identity = 139/211 (65.88%), Postives = 171/211 (81.04%), Query Frame = 2
Query: 104 TDLAGRVINTALKGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQL 736
T L R I A+ GLQY+L+FEA+LLSA +LYGALYW+VMPL LHDKP+ +YS T GSAT TVDF A HTQWDP PL +ER K+LKAGQHY+VGLEL MPTS +NR++GVFMVHT L+D+QDN LA+SARPAMLPHTS L K + M FAWPL+L GL++E ETI++ C+D+Y+E+A PLTKA+VTV+SGRVQ Y +SI+ITPQ+
Sbjct: 2 TMLVNRAIAAAVTGLQYLLLFEAVLLSAVVLYGALYWLVMPLRLHDKPIFLDYSDRATTGSATGTVDFLARHTQWDPSPLTNVERLNTKVLKAGQHYKVGLELQMPTSYINRRIGVFMVHTTLLDEQDNELASSARPAMLPHTSALRKGVGMMFAWPLHLAGLRREEETIYVDCIDYYEENALHPLTKARVTVSSGRVQFYSSSINITPQV 212
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A835ZAP9_9STRA (Putative adipose-regulatory protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP9_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.140e-49 Identity = 102/248 (41.13%), Postives = 146/248 (58.87%), Query Frame = 2
Query: 113 AGRVINTALKGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGG---TAGSATATVDFQAEHTQW---DPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVIFITSLEVILVGFLY 838
A ++ L+ L+++ I LL +A+LY LYW+ MP L PL+F+Y G T A VD HTQW + + +P + +++L AGQ Y V LEL +P SP N K GVFM++T L D + L +SAR A LPH+S LL+ L++F WPLYL+G+ E+E + +PC D+ +E P+ +A V ++S VQ+Y A + I+PQL GLPWLM +WFY+ G + I L GF Y
Sbjct: 57 ARSAVSLLLQVLKWLCIGYTLLTVSAVLYAGLYWLAMPARLIKVPLYFDYGMRGFMRTREPPLARVDLLTRHTQWQLGEHMTVP--PKVGERVLAAGQQYSVTLELSLPQSPANEKAGVFMLYTRLYDKEKQLLGSSARAAFLPHSSPLLRALRLFTLWPLYLMGMSTESEALEVPCFDYLEEVVDSPMAEAHVQLSSPSVQVYEAWLVISPQLTGLPWLMREWFYTCAILGTLSIALLLACTGGFAY 302
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A024GC99_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GC99_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.210e-27 Identity = 75/242 (30.99%), Postives = 129/242 (53.31%), Query Frame = 2
Query: 146 LQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYS----------RGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHT-VLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVIFITSLEVILVGFLY 838
LQ+ L SAA++Y +Y ++MP HD+ ++F+Y R TA +D H W ++ +K LL AG Y++ +EL +P S VN K+G+FM++T V LA+SARP ++ T+ L+++++ + +LL L + + I++P M Y+E+ + PLT K+ + +Q+Y A + I QL G+P+LM++W +T ++ I E +LV +Y
Sbjct: 54 LQFCTALGLLFASAALIYALMYHLIMPTRCHDQEIYFDYGNHAHLVRDYDRKLNLTLPTAKLDLLEPHRHWKS--HTEVDARKKGLLVAGVKYDLFVELNVPESSVNYKIGMFMIYTHVQTAGGKMTLASSARPVIVRETNSLIRLVQRGVWFFPHLLSLSEPTQRIWVPVMIGYEENKKSPLTNVKIVLNHPEIQIYSAKLTIIAQLTGIPYLMYNWSIATAFLFILNIAFFEALLVLIVY 293
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A2P4Y5K1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5K1_9STRA) HSP 1 Score: 120 bits (300), Expect = 9.060e-26 Identity = 74/229 (32.31%), Postives = 122/229 (53.28%), Query Frame = 2
Query: 182 SAAILYGALYWVVMPLHLHDKPLHFNYSR--GGTAGSA-----TATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYST---FAAGVIFITSLEVILVGFLY 838
+A +LYG LY+VV+P H++ + FNY G A TAT++ QW + +P + +L G Y+V +EL +P S N +VGVFMV T L + LATSARP L ++ L++ F Y LG + A+T+ + ++ Y ED PLT+ V + + ++Q+Y A + + QL G+ +LM+ W T F ++F+ +L ++++ +Y
Sbjct: 66 TAFVLYGLLYYVVIPSRFHEQEIFFNYGHRHGDITQPAHMYVPTATLNLLDPVHQWQSM-IPQPHETTQSVLVPGVKYDVIVELTVPESRANAEVGVFMVSTSLFEGDKRQLATSARPVTLHDMPTPVRWLRLGFWLIPYTLGFTEPAQTLRVTAINGYMEDTEYPLTRVDVELNTPKLQVYSAKLTVIAQLTGIRYLMYHWAVPTAILFVLNIVFMEALALVILYAVY 293
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: F0W982_9STRA (Uncharacterized protein AlNc14C39G3349 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W982_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.240e-22 Identity = 70/229 (30.57%), Postives = 117/229 (51.09%), Query Frame = 2
Query: 194 LYGALYWVVMPLHLHDKPLHFNYS----------RGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHT-VLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYST---FAAGVIFITSLEVILVGFLY 838
+Y LY +VMP HD+ + F+Y R TA ++ H W G + LL AG Y++ +EL +P S VN K+G+FMV+T V D LA+SARP ++ + L+++++ + +LL L + + +++P M Y+E + P+T K+ + +Q+Y A + I QL G+P+LM+ W +T F + F L +++V LY
Sbjct: 2 IYALLYNLVMPTRCHDQEIFFDYGNHAQLVRDYDRKLNLTLPTADLNLLEPHRHWKTHEEIGPKT--ASLLVAGVRYDLFVELHVPESFVNYKIGMFMVYTHVQTAGGDMTLASSARPVIVREINSLIRLVQRGVWFLPHLLSLSEPTQRLWVPVMIGYEESKKSPMTNVKIVLNHPEIQIYSAKLTIIAQLTGIPYLMYHWSVATAFLFILNIAFFEGLLILVVYGLY 228
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: H2MPF1_ORYLA (Seipin n=4 Tax=Oryzias TaxID=8089 RepID=H2MPF1_ORYLA) HSP 1 Score: 105 bits (263), Expect = 7.080e-21 Identity = 81/283 (28.62%), Postives = 135/283 (47.70%), Query Frame = 2
Query: 23 RTPRDGTADQYEHHMPNRPLGSLLNSTTDLAGRVINTALKGL-QYVLIFEALLLS---AAILYGALYWVVMPLHLHDKPLHFNYSRG----GTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVI--FITSLEVILVGFLYF 841
RTP G A+ H + +G LL+ D+A + A + + Q ++F L L + LYG+ Y+ MP P+HF YS G TA + F + +++++ GQ Y + LEL MP SPVN ++G+FMV +++ R AML + S LL+ L FF PL L G+ ++ + + + YK +A +P A + V S +VQ+Y + + I G+ ++M+++ ++ GV F + L+G+L F
Sbjct: 20 RTPCPGPAEAMGH----QAVGPLLHWLQDVAAVTLLKARRTIFQAAILFCILCLLLWVSVFLYGSFYYSYMPSVSFSTPVHFYYSTDCSGPGLCSFPTANISF--------------MRNDREQVMAHGQPYRISLELEMPESPVNERLGMFMVKMFCYTRGGGIVSSVGRSAMLHYRSALLQALSTFFFSPLLLTGMAEQKQLVEVELFSEYKSNAYQPAIGAVIEVHSKQVQIYSSRLRIHAYFTGIRYVMYNFPVTSAVIGVATNFTFLSAIALLGYLQF 284
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A8J5E707_9DIPT (Seipin n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5E707_9DIPT) HSP 1 Score: 103 bits (258), Expect = 1.790e-20 Identity = 74/260 (28.46%), Postives = 125/260 (48.08%), Query Frame = 2
Query: 74 RPLGSLLNS--------TTDLAGRVINTALKGLQYVLIFEALLLSAAI-LYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVIFITSLEVILV 826
RP+ S++++ T+D V A+K V I A+++ AA+ +Y A Y+ +P H +P++ + T + F H +++LL GQ Y V L + MP SP N+ +G+FMV + D S R AML + S L++ + PLY+ G+K+EA+ +FI Y++D P+T + + S +Q Y ++HIT GL ++M W + A G+ T+L I++
Sbjct: 23 RPITSVVSTAFDHYRTKTSDQISSVKEIAVKT-SIVAISSAIVIWAAVFMYIAFYYTFIPAVAHTRPVYMQFE-SCTTNNQRGPCSFPHAHVSLTK---------RQQLLMVGQPYRVYLSIDMPESPQNQDLGMFMVCAEMRDQLTQLRDHSCRAAMLHYKSKLIRTITTLIMSPLYVTGVKEEAQQVFIELFTSYEDDQSHPVTDVFIELQSRELQYYSMTLHITAHFSGLRYIMFHWPMLSAAIGIC--TNLFFIMI 269
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: G3MGN0_AMBMU (Seipin (Fragment) n=2 Tax=Amblyomma TaxID=6942 RepID=G3MGN0_AMBMU) HSP 1 Score: 102 bits (254), Expect = 5.760e-20 Identity = 63/249 (25.30%), Postives = 120/249 (48.19%), Query Frame = 2
Query: 86 SLLNSTTDLAGRVINTALKGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGV---IFITSLEVIL 823
+LL + G V + ++F + ++ +LYG YW +P H P+H ++ G D+ + + PG Q L GQ Y++ LEL MP S N+++G+F V ++ + L ++ R +L + S L+++L F P+ L G +E +T+ I + Y ED +P T+A + + + ++++Y A++ + GL +L+++W ++ G+ F SL +L
Sbjct: 48 TLLKLPLTVFGGVRQLVSQSFFVAVLFSVITWTSILLYGVFYWNYIPKSSHVFPVHLHFESKACPGGF---CDYPMANVT---IVRPG----QDDYLARGQRYKILLELEMPESEANQRIGMFTVRLDMISEDGEVLRSTQRSGVLRYKSMLVRLLSTLFYIPMLLFGSAEEKQTVSILLFERYMEDYAKPATQAGIMIRNSQIEIYTATLKVYADFIGLRYLLYNWPLTSALVGISTNFFFVSLVALL 286
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A067R0Z7_ZOONE (Seipin n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R0Z7_ZOONE) HSP 1 Score: 102 bits (253), Expect = 6.000e-20 Identity = 67/218 (30.73%), Postives = 106/218 (48.62%), Query Frame = 2
Query: 140 KGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGV 793
+G L+ +L A LY A Y+ MP H + +H + + ++ F + H + L R Q+ LL GQ Y++ L+L MP SP N+K+G+FMV L D + S R AML + S LL +L P+ + G K+E + I + + ++ED P+T V + S V+LY A++HI G+ + M W + A G+
Sbjct: 28 RGGVVALVAAVVLWFAIFLYVAFYYTYMPSISHVRAVHLQFK---SCEASKGICSFPSAHVR--------LTRKQQ-LLMIGQQYKMYLDLEMPESPANQKLGMFMVCIRLQDKDGQLVDNSCRSAMLHYRSYLLHMLSTLIFSPMMVFGNKEEKQNIVLELLADFEEDQNHPVTDIYVEIQSRHVELYSATLHIHAHFTGIRYFMFHWPMLSAAVGI 233 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11.114.1 >prot_A-nodosum_M_contig11.114.1 ID=prot_A-nodosum_M_contig11.114.1|Name=mRNA_A-nodosum_M_contig11.114.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=457bp MPNRPLGSLLNSTTDLAGRVINTALKGLQYVLIFEALLLSAAILYGALYWback to top mRNA from alignment at A-nodosum_M_contig11:1538261..1542401+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11.114.1 ID=mRNA_A-nodosum_M_contig11.114.1|Name=mRNA_A-nodosum_M_contig11.114.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4141bp|location=Sequence derived from alignment at A-nodosum_M_contig11:1538261..1542401+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11:1538261..1542401+ >mRNA_A-nodosum_M_contig11.114.1 ID=mRNA_A-nodosum_M_contig11.114.1|Name=mRNA_A-nodosum_M_contig11.114.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1371bp|location=Sequence derived from alignment at A-nodosum_M_contig11:1538261..1542401+ (Ascophyllum nodosum dioecious)back to top |