mRNA_A-nodosum_M_contig11.114.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig11.114.1
Unique NamemRNA_A-nodosum_M_contig11.114.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A6H5JEL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL4_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 4.250e-112
Identity = 172/262 (65.65%), Postives = 210/262 (80.15%), Query Frame = 2
Query:   53 YEHHMPNRPLGSLLNSTTDLAGRVINTALKGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVIFITSLEVILVGFLY 838
            ++H +P  PL SL+ S T L  R +  A+ GLQY+L+FEA+LLSA ILYGALYW+VMPL LHDKP+  +YS   T G AT TVDF A HTQWDP PL  +ER   K+L AGQHY+VGLEL MPTS +NR+VGVFMVHT L+D+QDN LA+SARPAMLPHTS L K + M FAWPL+L GL++E ETI++ C+D+Y+E+A  PLTKA+VTV+SGRVQ Y +SI+ITPQLKGLPWLMHD+FYST AAGV+FI SLE++L GF Y
Sbjct:   65 HQHQLPPGPLASLVESMTMLVNRAVAAAVTGLQYLLLFEAVLLSAVILYGALYWLVMPLRLHDKPIFLDYSDRATTGGATGTVDFLARHTQWDPSPLTNVERLNTKVLNAGQHYKVGLELQMPTSYINRRVGVFMVHTTLLDEQDNELASSARPAMLPHTSALRKGVGMMFAWPLHLAGLRREEETIYVDCIDYYEENALHPLTKARVTVSSGRVQFYSSSINITPQLKGLPWLMHDFFYSTLAAGVLFIASLELMLFGFCY 326          
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: D7G4V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V6_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 9.890e-91
Identity = 139/211 (65.88%), Postives = 171/211 (81.04%), Query Frame = 2
Query:  104 TDLAGRVINTALKGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQL 736
            T L  R I  A+ GLQY+L+FEA+LLSA +LYGALYW+VMPL LHDKP+  +YS   T GSAT TVDF A HTQWDP PL  +ER   K+LKAGQHY+VGLEL MPTS +NR++GVFMVHT L+D+QDN LA+SARPAMLPHTS L K + M FAWPL+L GL++E ETI++ C+D+Y+E+A  PLTKA+VTV+SGRVQ Y +SI+ITPQ+
Sbjct:    2 TMLVNRAIAAAVTGLQYLLLFEAVLLSAVVLYGALYWLVMPLRLHDKPIFLDYSDRATTGSATGTVDFLARHTQWDPSPLTNVERLNTKVLKAGQHYKVGLELQMPTSYINRRIGVFMVHTTLLDEQDNELASSARPAMLPHTSALRKGVGMMFAWPLHLAGLRREEETIYVDCIDYYEENALHPLTKARVTVSSGRVQFYSSSINITPQV 212          
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A835ZAP9_9STRA (Putative adipose-regulatory protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP9_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.140e-49
Identity = 102/248 (41.13%), Postives = 146/248 (58.87%), Query Frame = 2
Query:  113 AGRVINTALKGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGG---TAGSATATVDFQAEHTQW---DPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVIFITSLEVILVGFLY 838
            A   ++  L+ L+++ I   LL  +A+LY  LYW+ MP  L   PL+F+Y   G   T     A VD    HTQW   + + +P   +  +++L AGQ Y V LEL +P SP N K GVFM++T L D +   L +SAR A LPH+S LL+ L++F  WPLYL+G+  E+E + +PC D+ +E    P+ +A V ++S  VQ+Y A + I+PQL GLPWLM +WFY+    G + I  L     GF Y
Sbjct:   57 ARSAVSLLLQVLKWLCIGYTLLTVSAVLYAGLYWLAMPARLIKVPLYFDYGMRGFMRTREPPLARVDLLTRHTQWQLGEHMTVP--PKVGERVLAAGQQYSVTLELSLPQSPANEKAGVFMLYTRLYDKEKQLLGSSARAAFLPHSSPLLRALRLFTLWPLYLMGMSTESEALEVPCFDYLEEVVDSPMAEAHVQLSSPSVQVYEAWLVISPQLTGLPWLMREWFYTCAILGTLSIALLLACTGGFAY 302          
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A024GC99_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GC99_9STRA)

HSP 1 Score: 123 bits (309), Expect = 5.210e-27
Identity = 75/242 (30.99%), Postives = 129/242 (53.31%), Query Frame = 2
Query:  146 LQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYS----------RGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHT-VLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVIFITSLEVILVGFLY 838
            LQ+      L  SAA++Y  +Y ++MP   HD+ ++F+Y           R       TA +D    H  W       ++  +K LL AG  Y++ +EL +P S VN K+G+FM++T V        LA+SARP ++  T+ L+++++    +  +LL L +  + I++P M  Y+E+ + PLT  K+ +    +Q+Y A + I  QL G+P+LM++W  +T    ++ I   E +LV  +Y
Sbjct:   54 LQFCTALGLLFASAALIYALMYHLIMPTRCHDQEIYFDYGNHAHLVRDYDRKLNLTLPTAKLDLLEPHRHWKS--HTEVDARKKGLLVAGVKYDLFVELNVPESSVNYKIGMFMIYTHVQTAGGKMTLASSARPVIVRETNSLIRLVQRGVWFFPHLLSLSEPTQRIWVPVMIGYEENKKSPLTNVKIVLNHPEIQIYSAKLTIIAQLTGIPYLMYNWSIATAFLFILNIAFFEALLVLIVY 293          
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A2P4Y5K1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5K1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 9.060e-26
Identity = 74/229 (32.31%), Postives = 122/229 (53.28%), Query Frame = 2
Query:  182 SAAILYGALYWVVMPLHLHDKPLHFNYSR--GGTAGSA-----TATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYST---FAAGVIFITSLEVILVGFLY 838
            +A +LYG LY+VV+P   H++ + FNY    G     A     TAT++      QW  + +P      + +L  G  Y+V +EL +P S  N +VGVFMV T L +     LATSARP  L      ++ L++ F    Y LG  + A+T+ +  ++ Y ED   PLT+  V + + ++Q+Y A + +  QL G+ +LM+ W   T   F   ++F+ +L ++++  +Y
Sbjct:   66 TAFVLYGLLYYVVIPSRFHEQEIFFNYGHRHGDITQPAHMYVPTATLNLLDPVHQWQSM-IPQPHETTQSVLVPGVKYDVIVELTVPESRANAEVGVFMVSTSLFEGDKRQLATSARPVTLHDMPTPVRWLRLGFWLIPYTLGFTEPAQTLRVTAINGYMEDTEYPLTRVDVELNTPKLQVYSAKLTVIAQLTGIRYLMYHWAVPTAILFVLNIVFMEALALVILYAVY 293          
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: F0W982_9STRA (Uncharacterized protein AlNc14C39G3349 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W982_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.240e-22
Identity = 70/229 (30.57%), Postives = 117/229 (51.09%), Query Frame = 2
Query:  194 LYGALYWVVMPLHLHDKPLHFNYS----------RGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHT-VLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYST---FAAGVIFITSLEVILVGFLY 838
            +Y  LY +VMP   HD+ + F+Y           R       TA ++    H  W      G +     LL AG  Y++ +EL +P S VN K+G+FMV+T V     D  LA+SARP ++   + L+++++    +  +LL L +  + +++P M  Y+E  + P+T  K+ +    +Q+Y A + I  QL G+P+LM+ W  +T   F   + F   L +++V  LY
Sbjct:    2 IYALLYNLVMPTRCHDQEIFFDYGNHAQLVRDYDRKLNLTLPTADLNLLEPHRHWKTHEEIGPKT--ASLLVAGVRYDLFVELHVPESFVNYKIGMFMVYTHVQTAGGDMTLASSARPVIVREINSLIRLVQRGVWFLPHLLSLSEPTQRLWVPVMIGYEESKKSPMTNVKIVLNHPEIQIYSAKLTIIAQLTGIPYLMYHWSVATAFLFILNIAFFEGLLILVVYGLY 228          
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: H2MPF1_ORYLA (Seipin n=4 Tax=Oryzias TaxID=8089 RepID=H2MPF1_ORYLA)

HSP 1 Score: 105 bits (263), Expect = 7.080e-21
Identity = 81/283 (28.62%), Postives = 135/283 (47.70%), Query Frame = 2
Query:   23 RTPRDGTADQYEHHMPNRPLGSLLNSTTDLAGRVINTALKGL-QYVLIFEALLLS---AAILYGALYWVVMPLHLHDKPLHFNYSRG----GTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVI--FITSLEVILVGFLYF 841
            RTP  G A+   H    + +G LL+   D+A   +  A + + Q  ++F  L L    +  LYG+ Y+  MP      P+HF YS      G     TA + F              +   +++++  GQ Y + LEL MP SPVN ++G+FMV           +++  R AML + S LL+ L  FF  PL L G+ ++ + + +     YK +A +P   A + V S +VQ+Y + + I     G+ ++M+++  ++   GV   F     + L+G+L F
Sbjct:   20 RTPCPGPAEAMGH----QAVGPLLHWLQDVAAVTLLKARRTIFQAAILFCILCLLLWVSVFLYGSFYYSYMPSVSFSTPVHFYYSTDCSGPGLCSFPTANISF--------------MRNDREQVMAHGQPYRISLELEMPESPVNERLGMFMVKMFCYTRGGGIVSSVGRSAMLHYRSALLQALSTFFFSPLLLTGMAEQKQLVEVELFSEYKSNAYQPAIGAVIEVHSKQVQIYSSRLRIHAYFTGIRYVMYNFPVTSAVIGVATNFTFLSAIALLGYLQF 284          
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A8J5E707_9DIPT (Seipin n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5E707_9DIPT)

HSP 1 Score: 103 bits (258), Expect = 1.790e-20
Identity = 74/260 (28.46%), Postives = 125/260 (48.08%), Query Frame = 2
Query:   74 RPLGSLLNS--------TTDLAGRVINTALKGLQYVLIFEALLLSAAI-LYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVIFITSLEVILV 826
            RP+ S++++        T+D    V   A+K    V I  A+++ AA+ +Y A Y+  +P   H +P++  +    T  +      F   H              +++LL  GQ Y V L + MP SP N+ +G+FMV   + D        S R AML + S L++ +      PLY+ G+K+EA+ +FI     Y++D   P+T   + + S  +Q Y  ++HIT    GL ++M  W   + A G+   T+L  I++
Sbjct:   23 RPITSVVSTAFDHYRTKTSDQISSVKEIAVKT-SIVAISSAIVIWAAVFMYIAFYYTFIPAVAHTRPVYMQFE-SCTTNNQRGPCSFPHAHVSLTK---------RQQLLMVGQPYRVYLSIDMPESPQNQDLGMFMVCAEMRDQLTQLRDHSCRAAMLHYKSKLIRTITTLIMSPLYVTGVKEEAQQVFIELFTSYEDDQSHPVTDVFIELQSRELQYYSMTLHITAHFSGLRYIMFHWPMLSAAIGIC--TNLFFIMI 269          
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: G3MGN0_AMBMU (Seipin (Fragment) n=2 Tax=Amblyomma TaxID=6942 RepID=G3MGN0_AMBMU)

HSP 1 Score: 102 bits (254), Expect = 5.760e-20
Identity = 63/249 (25.30%), Postives = 120/249 (48.19%), Query Frame = 2
Query:   86 SLLNSTTDLAGRVINTALKGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGV---IFITSLEVIL 823
            +LL     + G V     +     ++F  +  ++ +LYG  YW  +P   H  P+H ++      G      D+   +     +  PG    Q   L  GQ Y++ LEL MP S  N+++G+F V   ++ +    L ++ R  +L + S L+++L   F  P+ L G  +E +T+ I   + Y ED  +P T+A + + + ++++Y A++ +     GL +L+++W  ++   G+    F  SL  +L
Sbjct:   48 TLLKLPLTVFGGVRQLVSQSFFVAVLFSVITWTSILLYGVFYWNYIPKSSHVFPVHLHFESKACPGGF---CDYPMANVT---IVRPG----QDDYLARGQRYKILLELEMPESEANQRIGMFTVRLDMISEDGEVLRSTQRSGVLRYKSMLVRLLSTLFYIPMLLFGSAEEKQTVSILLFERYMEDYAKPATQAGIMIRNSQIEIYTATLKVYADFIGLRYLLYNWPLTSALVGISTNFFFVSLVALL 286          
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Match: A0A067R0Z7_ZOONE (Seipin n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R0Z7_ZOONE)

HSP 1 Score: 102 bits (253), Expect = 6.000e-20
Identity = 67/218 (30.73%), Postives = 106/218 (48.62%), Query Frame = 2
Query:  140 KGLQYVLIFEALLLSAAILYGALYWVVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQKKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARPAMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLTKAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGV 793
            +G    L+   +L  A  LY A Y+  MP   H + +H  +    +  ++     F + H +        L R Q+ LL  GQ Y++ L+L MP SP N+K+G+FMV   L D     +  S R AML + S LL +L      P+ + G K+E + I +  +  ++ED   P+T   V + S  V+LY A++HI     G+ + M  W   + A G+
Sbjct:   28 RGGVVALVAAVVLWFAIFLYVAFYYTYMPSISHVRAVHLQFK---SCEASKGICSFPSAHVR--------LTRKQQ-LLMIGQQYKMYLDLEMPESPANQKLGMFMVCIRLQDKDGQLVDNSCRSAMLHYRSYLLHMLSTLIFSPMMVFGNKEEKQNIVLELLADFEEDQNHPVTDIYVEIQSRHVELYSATLHIHAHFTGIRYFMFHWPMLSAAVGI 233          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEL4_9PHAE4.250e-11265.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4V6_ECTSI9.890e-9165.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAP9_9STRA1.140e-4941.13Putative adipose-regulatory protein-domain-contain... [more]
A0A024GC99_9STRA5.210e-2730.99Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A2P4Y5K1_9STRA9.060e-2632.31Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
F0W982_9STRA2.240e-2230.57Uncharacterized protein AlNc14C39G3349 n=1 Tax=Alb... [more]
H2MPF1_ORYLA7.080e-2128.62Seipin n=4 Tax=Oryzias TaxID=8089 RepID=H2MPF1_ORY... [more]
A0A8J5E707_9DIPT1.790e-2028.46Seipin n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5E7... [more]
G3MGN0_AMBMU5.760e-2025.30Seipin (Fragment) n=2 Tax=Amblyomma TaxID=6942 Rep... [more]
A0A067R0Z7_ZOONE6.000e-2030.73Seipin n=1 Tax=Zootermopsis nevadensis TaxID=13603... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:1538261..1542401 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G4V6
Preferred nameBSCL2
PFAMsSeipin
Model size1888
Max annot lvl2759|Eukaryota
KEGG koko:K02880,ko:K19365
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categorysignal anchor
GOsGO:0000003,GO:0001558,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006638,GO:0006639,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008361,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009605,GO:0009791,GO:0009846,GO:0009856,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010154,GO:0010162,GO:0010344,GO:0010431,GO:0010720,GO:0010769,GO:0010770,GO:0010876,GO:0010883,GO:0010884,GO:0010975,GO:0010976,GO:0012505,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016054,GO:0019216,GO:0019222,GO:0019395,GO:0019637,GO:0019725,GO:0019752,GO:0019915,GO:0021700,GO:0022008,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022611,GO:0030003,GO:0030154,GO:0030176,GO:0030258,GO:0030307,GO:0030516,GO:0031224,GO:0031227,GO:0031323,GO:0031344,GO:0031346,GO:0031667,GO:0031984,GO:0032101,GO:0032103,GO:0032469,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032787,GO:0032879,GO:0033036,GO:0034389,GO:0034440,GO:0040008,GO:0042175,GO:0042592,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043900,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045444,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045773,GO:0045833,GO:0045927,GO:0046339,GO:0046395,GO:0046473,GO:0046486,GO:0046890,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048679,GO:0048680,GO:0048686,GO:0048687,GO:0048690,GO:0048691,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0050994,GO:0050995,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051235,GO:0051239,GO:0051240,GO:0051704,GO:0051960,GO:0051962,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055114,GO:0060284,GO:0061387,GO:0061458,GO:0065007,GO:0065008,GO:0070570,GO:0070572,GO:0070925,GO:0071695,GO:0071704,GO:0071840,GO:0072329,GO:0072503,GO:0072507,GO:0080090,GO:0080134,GO:0080135,GO:0080154,GO:0080155,GO:0090066,GO:0090207,GO:0098771,GO:0098827,GO:0120035,GO:0140042,GO:1901575,GO:1901576,GO:1903034,GO:1903036,GO:1905952,GO:1905954,GO:2000026,GO:2000241
Exons7
Evalue8.43e-94
EggNOG OGsKOG4200@1|root,KOG4200@2759|Eukaryota
Ec32 ortholog descriptionAdipose-regulatory protein, Seipin
Ec32 orthologEc-20_000180.1
Descriptionlipid storage
Cds size1371
COG categoryG
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.114.1prot_A-nodosum_M_contig11.114.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig11 1538325..1541948 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866491.6915252-UTR-A-nodosum_M_contig11:1538260..15383241680866491.6915252-UTR-A-nodosum_M_contig11:1538260..1538324Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11 1538261..1538324 +
1680866491.7927825-UTR-A-nodosum_M_contig11:1541948..15424011680866491.7927825-UTR-A-nodosum_M_contig11:1541948..1542401Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11 1541949..1542401 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866491.7143235-CDS-A-nodosum_M_contig11:1538324..15384021680866491.7143235-CDS-A-nodosum_M_contig11:1538324..1538402Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 1538325..1538402 +
1680866491.7266169-CDS-A-nodosum_M_contig11:1538580..15387181680866491.7266169-CDS-A-nodosum_M_contig11:1538580..1538718Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 1538581..1538718 +
1680866491.7358732-CDS-A-nodosum_M_contig11:1539074..15391631680866491.7358732-CDS-A-nodosum_M_contig11:1539074..1539163Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 1539075..1539163 +
1680866491.748149-CDS-A-nodosum_M_contig11:1539820..15399081680866491.748149-CDS-A-nodosum_M_contig11:1539820..1539908Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 1539821..1539908 +
1680866491.7580988-CDS-A-nodosum_M_contig11:1540241..15404241680866491.7580988-CDS-A-nodosum_M_contig11:1540241..1540424Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 1540242..1540424 +
1680866491.7706468-CDS-A-nodosum_M_contig11:1540817..15409101680866491.7706468-CDS-A-nodosum_M_contig11:1540817..1540910Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 1540818..1540910 +
1680866491.783434-CDS-A-nodosum_M_contig11:1541246..15419481680866491.783434-CDS-A-nodosum_M_contig11:1541246..1541948Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11 1541247..1541948 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig11.114.1

>prot_A-nodosum_M_contig11.114.1 ID=prot_A-nodosum_M_contig11.114.1|Name=mRNA_A-nodosum_M_contig11.114.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=457bp
MPNRPLGSLLNSTTDLAGRVINTALKGLQYVLIFEALLLSAAILYGALYW
VVMPLHLHDKPLHFNYSRGGTAGSATATVDFQAEHTQWDPVPLPGLERFQ
KKLLKAGQHYEVGLELLMPTSPVNRKVGVFMVHTVLMDDQDNALATSARP
AMLPHTSGLLKILKMFFAWPLYLLGLKKEAETIFIPCMDFYKEDARRPLT
KAKVTVTSGRVQLYRASIHITPQLKGLPWLMHDWFYSTFAAGVIFITSLE
VILVGFLYFFFFLGEEDEQPPRSDGAQNRAATRGPTRRYTAGNLSSTSNA
TAAAMGGATNNEGLRRRGMTSSSSERQELPPGVQAYQRGARYVIRNRGGD
QTPTETSERSKDGGPKSSDQPGRVRTGEGSQSSAMASWAPLPGNLDRDGG
REELERQSVKNNSATVRSEGIVGGGWPSIVQSEGDELQDSGIVGEKNADV
AGGDGQ*
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mRNA from alignment at A-nodosum_M_contig11:1538261..1542401+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig11.114.1 ID=mRNA_A-nodosum_M_contig11.114.1|Name=mRNA_A-nodosum_M_contig11.114.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4141bp|location=Sequence derived from alignment at A-nodosum_M_contig11:1538261..1542401+ (Ascophyllum nodosum dioecious)
CTTGGGCGGGCAGGTGACCCGTCGAACGCCGAGGGATGGAACCGCGGATC AGTATGAGCACCACATGCCGAATCGGCCGCTGGGGAGTCTTCTCAATTCC ACCACCGACCTTGCCGGCCGGGTAATCAACACGGCACTGAAGGCAGGTCA AAGACGTTAATGTTGGGTGCTTAACCGTTCGCGAGTAGCTCTACTGTAGA GCGATATTAGCCCTCTGGAGTGTTTTAGAACGGGAAGCGCCTGGTATCCC GCTCGTGAAATTTGCCGAACTGGAACCTTCATACCCGATCGCCTCCTCTG TCGGGTTGAACGTGAACCAGGGCTTGCAGTACGTGCTGATCTTCGAAGCC CTGCTGCTATCAGCCGCCATACTCTACGGTGCCTTGTACTGGGTGGTGAT GCCGCTACACCTTCACGACAAGCCCTTGCACTTTAACTACTCCCGAGGAG GAACCGCCGTGAGTTGGATTCTCCGGACTATCTTTTCGACCTTATTAGTT GTGTAAGAAGATCGTGCATGTACCGAAACGTGTGTGCGTGTTTCACCCGA ACGGATCTTGGCTTGCCTCCTGCGGGGATGGAGGGTTCCGCGCCGGAATT CGGTTCCGCGCCGGAATTCATCTTAACGATGGGCTCAAGCGATCGAAGCA ACAAATGCAAGCTGGGGGCGCTTCATCTGATTCGGTATTTCGCTGTAGTA CCGACTGTCCTTCCTACGGCCTGTGGCGCTCGCCCACGTCGATGCGTGGC ACAGCGCCACACGTGACTTCCTCAGCTCACGTCAACTGTTGAATGGGCGT GATTTGTCCCTCAGGGTAGTGCGACTGCGACGGTAGACTTCCAAGCGGAG CACACCCAGTGGGATCCGGTGCCTCTGCCGGGGTTAGAGCGATTTCAAAA GAAGTGAGTGCACTCGATGCCCCCGATATCGTAGACCATCACTACCTTAA TGTTCGAGGACAAGGTCCCGTCGTAGATGAGTTAGTCCCCTTGCGTAGTG ATCAGGTCGTGAAGTCCCCAAGGACGATGCAGATCGATTGTTAAAATTGA TCATTCGAATGTCGGCCCGACCAGGTGGCTTCTGTGTTGAGAGATAAAAT AGGTGTATGGTTGCAGATTTTACCTTGGCTAAACCTGGCTTGCGTCCGCA CGATACACCCGCAACGTCGAATTATTGATCTACAACGTGTACTGTTGTAG GTGATGGAAAAAGAGCCAAGACAATCGATCCCGGGGAATTTGGTTTTCTG TAGCCTAATTATACAGTCCTGGTTTTATGTAGCGTCACCTCTATTCTTGT CTTGAAAATTCATGATATGCTTTGAAAAAGAAATGGGGACTGGATGGAAA TACATCCGGTATGGTTAACAACTCGTTATAGATAAGACTCTCCTAATCAA AGTACAGATTATTTAATGTTCTTCCCACGATACCGTTTCACGCCATAGAT TTTCCGCCAATGTCTATATGGCCTATGATATGCCCCTGACACGGTACCAT AAAAAAGGAAGGTTGGCTCTTTTTCTCGCGTTTACCGGGTGTGGTGGGGG TGGTGCTCAGGTTGCTCAAGGCTGGGCAGCATTACGAGGTTGGCCTGGAG CTGCTGATGCCGACTTCCCCCGTCAACAGAAAAGTTGGGGTCTTCATGGT ACGATATTAGAATCTGCTACCGCCCACTCTGTGCTCTTACCGGCGATCGA AACACTGCACGAGCTCTGCCTGCAAATGTGCAGCATCATAGAATAGCATA GCTCTTGATAGCCCGTCGTGAGGGTCAACGCGAAGTCTTGCCTTCCTTGT TTAGGAGGGCACACGATAAGCTGTTTTTTCGCGAATGGTCACCAACGTCT AGTGAACTGCATATCCACAAAACCAGTGCGCCCTAGCGCTCGAGTGATCG CCGTTGTTTCGACTATGCTATCACTTCCAAACACACGTCAAAATGTCGTG GGACTACACGACGATATTGGACGCGACGAAGGTGCACACGGTATTAATGG ACGACCAAGATAACGCGCTGGCGACCTCGGCTCGCCCCGCCATGCTACCC CACACATCGGGTCTCCTGAAGATCCTTAAGATGTTCTTTGCATGGCCGCT TTATCTTTTGGGCCTCAAGAAAGAGGCGGAAACGATCTTCATCCCTTGTA TGGACTTCTACAAGGCAAGCTACTTACGCCGGACTAGGTGGTGCTGTGTC GTAGTGCGTCGTAGTGCTGCATGGTCTTCTCGCTTGCGACTGGCGGGTTG CCAAGTCGATTATCAGTCGTCGGTGTTGCTTCATTGTAGTGGCGAGTCGG GTGTTTGTTCGTCCAGCTTTGAGCTTGGCTCCATGAGGATCGGGCCTTTG CCAAGGACGCTCGAACCATTTTTTTTCTCTAGTATTATGAAAGTTATTCC GTCCGACGCGCATTGCACGTATTGATGTGTATGTTGTTACGAACATCGTG ACGAGATAGCTGGAGCAAGGGACCCACTGCAACATGTCGTTGGGGTTCGG CTCGTTTGACCTCGTTAGTTTTTGACCCTTTATCCGCTCTCTGGCAAAAC CTTCCAGGAAGATGCTCGGCGTCCGTTGACCAAAGCCAAAGTAACCGTAA CAAGCGGCCGAGTGCAGCTGTACCGCGCATCGATACACATCACACCGCAG GTGAGCGCTTCGGCAGAAAGTAAGGCGTGTCCTCCACTCTGGCGCCCATT TCCCCCTCCGTTTACGACGCGGCCCAAGATATGGTATCCTTGATGCCCGA AGGAAGCCGGTGGGGACCTAGCGTAGCTCGACCTGACGCTTCAACGTTCG ATGCCTCTTCAAATTGCCCGAACTCCAACCTCGTGATACAAGTTCCAACC AAAACGTTGAATCAGTTGCCTCATCTCAGATTTATGGTCCTTAGAGATGT ATGATACCCAGAGTATCCTATTCAATACCTGGTACACTGAAAGCCCCCTC TCTCTTTTCGCTACTTTGCAACATGCAACACCCCAGTTGAAGGGATTGCC CTGGTTAATGCACGACTGGTTTTACTCAACATTTGCGGCCGGCGTCATCT TCATAACGTCTCTCGAGGTCATCCTCGTCGGTTTCCTCTATTTTTTCTTC TTCCTGGGCGAGGAAGACGAGCAACCGCCGCGCAGCGATGGCGCCCAGAA CAGAGCGGCCACTAGAGGGCCCACTAGACGATACACGGCCGGTAACTTGT CGTCCACCTCAAATGCCACTGCGGCGGCCATGGGGGGAGCTACAAACAAC GAAGGCCTGCGCCGACGAGGTATGACCTCTTCGTCGTCGGAAAGGCAGGA ACTGCCACCCGGAGTCCAGGCGTACCAACGGGGCGCCAGGTACGTTATCA GAAATCGCGGAGGCGACCAAACACCAACGGAGACTTCTGAGCGATCGAAG GACGGGGGTCCGAAAAGCAGTGACCAGCCCGGGCGCGTGCGCACTGGCGA AGGGTCGCAATCGTCAGCCATGGCGTCATGGGCTCCGTTACCGGGAAATC TGGATAGGGATGGCGGACGGGAAGAACTGGAGAGGCAAAGCGTGAAGAAT AATAGCGCCACGGTAAGAAGCGAGGGAATCGTAGGTGGTGGATGGCCTTC GATTGTCCAATCAGAGGGCGATGAGTTGCAGGACTCGGGTATCGTGGGTG AGAAAAATGCGGACGTTGCCGGAGGAGACGGTCAGTGATCGTGCGCGGCC ATCTCCCACCGGGTGATCCTGACTCGGACAACCGCGATTACAGGAACGGT ACGTACTGCAGTGCATACGTTGCGGAAACGGTATATAGTGCAGTGTTAAC GATACGTGGGGCGTGTACGGTGCCAAGAAGTCAGAAACGACGCAGACATG TACATCGCCTCTTTTCAAGTTCGGCGAGTACCTCGCCTGGCATCAAACAC GTGTTCTGTAGACCAATTTTTTTAGGTCCTCTCGGTTCTAGTGCTTCATC TGCTGCAAACAATTGGTCGCATCCAGGTGTAAGCAGTGTCAAAGTCCAGA GAGTTGATGATCGACGCGCGCTCTTCGGTACCTTCGAGTAACGTTGCCTG AATAAGCTTGACGCAAGCTGGGTCTCCACGTATTCAATATAAACGTGTCC TGCTACAGTTATTATATATAGCACATTGTGCGATTCAAGAC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig11:1538261..1542401+

>mRNA_A-nodosum_M_contig11.114.1 ID=mRNA_A-nodosum_M_contig11.114.1|Name=mRNA_A-nodosum_M_contig11.114.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1371bp|location=Sequence derived from alignment at A-nodosum_M_contig11:1538261..1542401+ (Ascophyllum nodosum dioecious)
ATGCCGAATCGGCCGCTGGGGAGTCTTCTCAATTCCACCACCGACCTTGC
CGGCCGGGTAATCAACACGGCACTGAAGGGCTTGCAGTACGTGCTGATCT
TCGAAGCCCTGCTGCTATCAGCCGCCATACTCTACGGTGCCTTGTACTGG
GTGGTGATGCCGCTACACCTTCACGACAAGCCCTTGCACTTTAACTACTC
CCGAGGAGGAACCGCCGGTAGTGCGACTGCGACGGTAGACTTCCAAGCGG
AGCACACCCAGTGGGATCCGGTGCCTCTGCCGGGGTTAGAGCGATTTCAA
AAGAAGTTGCTCAAGGCTGGGCAGCATTACGAGGTTGGCCTGGAGCTGCT
GATGCCGACTTCCCCCGTCAACAGAAAAGTTGGGGTCTTCATGGTGCACA
CGGTATTAATGGACGACCAAGATAACGCGCTGGCGACCTCGGCTCGCCCC
GCCATGCTACCCCACACATCGGGTCTCCTGAAGATCCTTAAGATGTTCTT
TGCATGGCCGCTTTATCTTTTGGGCCTCAAGAAAGAGGCGGAAACGATCT
TCATCCCTTGTATGGACTTCTACAAGGAAGATGCTCGGCGTCCGTTGACC
AAAGCCAAAGTAACCGTAACAAGCGGCCGAGTGCAGCTGTACCGCGCATC
GATACACATCACACCGCAGTTGAAGGGATTGCCCTGGTTAATGCACGACT
GGTTTTACTCAACATTTGCGGCCGGCGTCATCTTCATAACGTCTCTCGAG
GTCATCCTCGTCGGTTTCCTCTATTTTTTCTTCTTCCTGGGCGAGGAAGA
CGAGCAACCGCCGCGCAGCGATGGCGCCCAGAACAGAGCGGCCACTAGAG
GGCCCACTAGACGATACACGGCCGGTAACTTGTCGTCCACCTCAAATGCC
ACTGCGGCGGCCATGGGGGGAGCTACAAACAACGAAGGCCTGCGCCGACG
AGGTATGACCTCTTCGTCGTCGGAAAGGCAGGAACTGCCACCCGGAGTCC
AGGCGTACCAACGGGGCGCCAGGTACGTTATCAGAAATCGCGGAGGCGAC
CAAACACCAACGGAGACTTCTGAGCGATCGAAGGACGGGGGTCCGAAAAG
CAGTGACCAGCCCGGGCGCGTGCGCACTGGCGAAGGGTCGCAATCGTCAG
CCATGGCGTCATGGGCTCCGTTACCGGGAAATCTGGATAGGGATGGCGGA
CGGGAAGAACTGGAGAGGCAAAGCGTGAAGAATAATAGCGCCACGGTAAG
AAGCGAGGGAATCGTAGGTGGTGGATGGCCTTCGATTGTCCAATCAGAGG
GCGATGAGTTGCAGGACTCGGGTATCGTGGGTGAGAAAAATGCGGACGTT
GCCGGAGGAGACGGTCAGTGA
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