mRNA_A-nodosum_M_contig10884.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 333 bits (854), Expect = 3.490e-98 Identity = 216/531 (40.68%), Postives = 297/531 (55.93%), Query Frame = 1
Query: 10 SLTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWVLLHKDGPLTVGEIVFAFYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRCTDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVEMIFGMAMVFVRFALILLVVIMGFAMALFSLLRDADNFNFNFADILLLLFKTLLGDVEAFEEFNDSAGNRFSFTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQIIFMKLLPFVFMRQPGKRGKICREIGQTIGQVSFWLVLSPVVVIVGTLLWVASSVYTLFVPAADLVNRVPSASTLRDSFSGGPPFTRFLTRFLSLYGLLFPGRESLQSTKRLAKLKAEIRLHIGVGGFCALGAPLCLLFLWLREPCFQVFQFIARLTC---RRRESRRIHSSSNEGSVEAHEQSTSMFDAKVHGILE--STGLGASVLQKYLEDPMIDPVVRPDEVELGATVEHMKLLRNVLEK 1587
SLT LPGAQF IAG++ P+ YY+VPA+RM LD +Y+ ML +S VL H+DGPLT GE FAFY+L + E +EM RD +Y D WN+LD+L + ++ GG +VRC D + WGRALYAL APLIF R+LFFAQ L F GPM++++F M V+F ++++VV++GFAM+ +L D D F L LFK +LG+V+ F F GN++ L V+YLVV+ ++LLNLLIA LST++++VE D+ +V+ R +E+YR +V + ++P PFNLVQ+I LP V +R +G + +G+++FWL L PV GT+LWV SS++ FV ++ A R + S G R+L F +C LGAPL L+ WL P + R C RR++ I S V+ +LE S GL A LQ YLEDP+ DP VRPDE TVE++K LRN LEK
Sbjct: 782 SLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDGPLTPGEAAFAFYILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFG----GTCLTLFKAMLGEVDFFGSF---PGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILS--LP-VMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSK---AQARRGALSVGSLLVRYLIVFF----------------------------------WCVLGAPLYLMAFWLTAP---MKWLKLRPWCWVWDRRQAPYI---------------ASWNPKSVNDLLEGNSGGLVAGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEK 1247
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 285 bits (729), Expect = 6.960e-81 Identity = 213/585 (36.41%), Postives = 306/585 (52.31%), Query Frame = 1
Query: 1 SRPSLTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWVLLHK--------DG------PLTVGEIVFAFYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRCTDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVEMIFGMAMVFVRFALILLVVIMGFAMALFSLLRDADNFNFNFADILLLLFKTLLGDVEAFEEFNDSAGNRFSFTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQI-----IFMKLLPFVFMRQPGKR------------GKIC------------REIGQTIGQVSFWLVLSPVVVIVGTLLWVASSVYTLFVPAADLVNRVPSASTLRDSFSG------GPPFTRFLTRFLSLYGLL-FPGRESLQSTKRLAKLKAEIRLHIGVGGF-----CALGAPLCLLFLWLREPCFQVFQFIARLTCRRRESRRIHSSSNEGSVEAHEQSTSMFDAKVHGILES--TGLGASVLQKYLEDPMIDPVVRPDEVELGATVEHMKLLRNVLE 1584
+ P+LT LPGAQFI+A ++A P YY+VPA+RM LDFV+Y+ M+A S++VL H DG L+ G F GA RE REM R + Y +D+WNVLD L ++ L G V+R D S WG A YAL APL+ RVLFFAQ L F GPMV++IF M ++F ++LVV++GF MAL + RD ++F D LL LFK +LG+ F+EF+ G R+ +L+V+YL ++T++LLNLLIA LST +A+V+ NT +V+ R + +YR +V D++PAPFNLVQ+ + P+ F+ + + G++ R + GQ+ +WLVL PV V G +LW S F A + S + +D F G P +++ + ++G P LQ + + E + + + F C LGAP CL WL P + F + +L R S + E E + + +L+ +G+GA L ++LEDPM D VR DE E TVEH+KLLR+ LE
Sbjct: 704 NTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGA-YREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVEDFG----DTLLGLFKAMLGETGFFDEFS---GGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLSG----FFYAQYAWHSWLSTTDEQDCFFGFLLESDEEPDAEDMSKEVVMFGSCGSPLWRMLQGLGIVFRFLLEW-IGVVLAWFLTFLLCILGAPCCLFLRWLVLPGTEFFSWCWKLAACR---------STQDPDEDEESPKRLSTPTIESMLKKGRSGVGAEKLLEFLEDPMNDKDVRQDEKEKKTTVEHIKLLRDRLE 1266
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 274 bits (700), Expect = 9.230e-77 Identity = 211/583 (36.19%), Postives = 297/583 (50.94%), Query Frame = 1
Query: 1 SRPSLTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWVLLHK--------DG------PLTVGEIVFAFYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRCTDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVEMIFGMAMVFVRFALILLVVIMGFAMALFSLLRDADNFNFNFADILLLLFKTLLGDVEAFEEFNDSAGNRFSFTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQIIF-----MKLLPFVFMRQPGKR------------GKIC------------REIGQTIGQVSFWLVLSPVVVIVGTLLWVASSVYTLFVPAADLVNRVPSASTLRDSFSGGP--PFTRFLTRFLSLYGLL-FPGRESLQSTKRLAKLKAEIRLHIGV--GGF-----CALGAPLCLLFLWLREPCFQVFQFIARLTCRRRESRRIHSSSNEGSVEAHEQSTSMFDAKVHGILES--TGLGASVLQKYLEDPMIDPVVRPDEVELGATVEHMKLLRNVLE 1584
+ P LT LPG QFI+A ++A P YY+VPA+RM LDFV+Y+ M+AV S +VL H DG L+ G F GA RE REM R + Y +D+WNVLD L I+ L G V+R D S WG A YAL APL+ RVLFFAQ L F GPMV++IF M ++F ++LVV++GF MAL RD +F D LL LFK +LG+ F+EF+ G R+ +L+V+YL ++T++LLNLLIA LST +A+V NT + +V+ R + +YR +V D++PAPFNLVQ+I + LP+ F+ + + G++ R + GQ +WLVL V V G +LW S ++ ++ ++ G P + + ++G P LQ + + + + IGV F C LGAP CL+ WL P + F + +L R S + E + + +L+ G GA L ++LEDPM D VR DE E TVEH+KLLR+ LE
Sbjct: 721 NTPILTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIFITAGA-YREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVADFG----DTLLGLFKAMLGETGIFDEFS---GGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIVFR---SVLQWIGVVLAWFLIFLLCILGAPCCLVLRWLILPGTEFFSWCWKLAACR---------STQDPGEDKKSPMRSSTPTIESMLKKGCCGAGAENLLEFLEDPMNDKDVRQDEKERKTTVEHIKLLRDRLE 1283
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 257 bits (657), Expect = 2.910e-71 Identity = 193/568 (33.98%), Postives = 289/568 (50.88%), Query Frame = 1
Query: 7 PSLTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWVLLHKDGPLTVGE------IVFA-----------FYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRCTDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVE-----------MIFGMAMVFVRFALILLVVIMGFAMALFSLLRDADNFNFNFADILLLLFKTLLGDVEAFEEFNDSAGNRFSFTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQIIFMKLLPFVF------------MRQPGKRGKICREIG-QTIGQVSFWLVLSPVVVIVGTLLWVASSVYTLFVPAADLVNRVPSASTLRDSFSGGPPFTRFLTRFLSLYGLLFPGRESLQSTKRLAKLKAEIRLHIGVGGFCALGAPLCLLFLWLREPCFQVFQFIARLTCRRRESRRIHSSSNEGSVEAHEQSTSMFDAKVHGILESTG-LGASVLQKYLEDPMIDPVVRPDEVELGATVEHMKLLRNVLE 1584
PSLT PGAQ I+AG+ A+PN Y++VPA+RM LD V+YI M+ S +VL H + E +VF +++G +E REM R+ Y ED+WN LD+LS++ L G V R D S G A YAL APL+ R LFF Q GPM++ ++F M + ++F ++ V+++GF MA L RD D+F +F D LFK +LGD + F+ F+ G+ + LLV+YL ++T++LLNLL+A LST++A+V N ++ +V+ R +++Y+ +V D++P PFNL+Q+I + + +Q R K G + IG V FW+VL PV VI G+LLW+ S +PA + RD+ G + L Y ++ P +C GAP+ LL LWL + ++R C + R + S G+ ++ +S +L+S G +GA L+++L+DPM D VR DE + TVEH+KLLRN LE
Sbjct: 704 PSLTPFPGAQVIVAGLAARPNDYFRVPAMRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSFGESFLD----LFKAMLGDTDFFKVFS---GDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLWMGS-----VLPAMYFWRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPC-------------------------WCVFGAPVYLLLLWLNAS----RRVLSRCPCN--DDTRSTAKSRHGASKSTIESM---------LLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLE 1219
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 245 bits (626), Expect = 1.450e-67 Identity = 197/559 (35.24%), Postives = 275/559 (49.19%), Query Frame = 1
Query: 7 PSLTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWVLLHK-------DGPLTVGEIVF-----------AFYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRCTDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVEMIFGMAMVFVRFALILLVVIMGFAMALFSLLRDADNFNFNFADILLLLFKTLLGDVEAFEEFNDSAGNRFSFTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQIIFMKLLPFV------------FMRQPGKRGKICREIG-QTIGQVSFWLVLSPVVVIVGTLLWVASSVYTLFVPAADLVNRVPSASTLRDSFSGGPPFTRFLTRFLSLYGLLFPGRESLQSTKRLAKLKAEIRLHIGVGGFCALGAPLCLLFLWLREPCFQVFQFIARLTCRRRESRRIHSSSNEGSVEAHEQSTSMFDAKVHGILEST--GLGASVLQKYLEDPMIDPVVRPDEVELGATVEHMKLLRNVLE 1584
P LT P AQFI+AG+ A+ N Y++VP +RM LD V+Y+ +L S +VL DG EIVF + G RE EM R+ YLED+WN LD+L ++ GF+ R D G A YAL APL+ R LFF Q GPMV IF M V ++F ++ VV++GF MA L RD D+F +F + LFK + G+ F F+ G+ + +LLV+YL ++TI+LLNLL+A LST++++V+ N D+ + + R +++Y+ +V DI+PAPFNL+Q++ + V RQ RG+ E G + IG V FW+VL PV V+ GTLLW+ S+ P + +L R G KRL+ + R + +C LGAP+ L LWL RL CR N AH +S F + IL G+GA L+++L+DPM D VR DE + TVEH+KLLRN LE
Sbjct: 525 PCLTPFPAAQFIVAGLAARSNDYFRVPVMRMVLDLVVYLGVLVALSTFVLFRSQAEQSRVDGSAD-EEIVFRKLNWSEATCATAVIAGGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARVVDWTQQLGPAFYALSAPLLVSRALFFVQIHPLQGPMV--IFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSFGESFLE----LFKAMFGETTFFNAFS---GDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVVWPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVST-----------------------------PLSVYLWRKHHREG----------DRKRLSLISLGCRYFFIIPLWCILGAPVYLFVLWLGAS--------RRLLCR----------CNYDVSIAHAES-GHFRCTIESILLEGPGGVGAKKLREFLDDPMDDKDVRQDERDKRTTVEHVKLLRNRLE 1015
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 243 bits (621), Expect = 2.810e-66 Identity = 193/583 (33.10%), Postives = 290/583 (49.74%), Query Frame = 1
Query: 10 SLTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWVLLHKDGPLTVG-EIVFAFYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRC---TDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVEMIFGMAMVFVRFALILLVVIMGFAMALFSLLRDADNFNFNFADILLLLFKTLLGDVEAFEEFNDSAGNRFSFTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQIIFMKLLPFVFM-------RQPG-----------------------------KRGKICREIGQTI-GQVSFWLVLSPVVVIVGTLLWVASSVYTLFVPAADLVNRVPSASTLRDSFSGGPPFTRFLTRFLSLYGLLFPGRESLQSTKRLAKLKAEIRLHIGVGGFCALGAPLCLLFLWLREPCFQVFQFIARLTCR----------------RRESRRIHSSSNEGSVEAHEQSTSMFDAKVHGILESTG-LGASVLQKYLEDPMIDPVVRPDEVELGATVEHMKLLRNVLE 1584
S+T PGA+FIIAG L++P SYYKVPALRM LD V YI M+ ++ +V+LH+ G + EIVF Y+ G + E RE+ D Y+ D+WN+LDV S+ +L GG + R D S RALYAL APL F R+LFFAQ L GPM++++F M + +F +I+L+V++GF + +SL ++ + ++ +F+ LG+ + ++F+ G F +LLV+YLV++TI++LNLL+A LSTA+A+V+ N +V R +++Y +V +D +P PFNL Q IF LPF+ + R+P KR + ++ + G+++FW +L P+ V+ G +LW+ S V V T D GG R+A++ I + CA+GAP L +W+R V + + L C R + I + + ++ A M + E+ G L S LQ +L+DPM DP VR DE TVEH+KLLRN LE
Sbjct: 1098 SITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHEAGDTSDWLEIVFTMYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDES--SRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYG----EVWKAIFRATLGETDYLDDFS---GTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFA--LPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMISIVKA----------PVVVWQTSGDKSLGG----------------------------RIARMLLVIFV-------CAVGAPFWHLVMWVRGGVAGVRRTMRALGCXXXXXXXXXXXXKRGDGRTTTASITARGSPATIVAEGAEDDMEKVVPIVLQEADGALTTSELQIFLDDPMSDPDVRRDEETRATTVEHIKLLRNRLE 1624
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 230 bits (587), Expect = 2.820e-62 Identity = 141/345 (40.87%), Postives = 208/345 (60.29%), Query Frame = 1
Query: 13 LTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWVLLHKDGPLTVGEIVFAFYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRCTDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVEMIFGMAMVFVRFALILLVVIMGFAMALFSLLRDADNFNFNFADILLLLFKTLLGDVEAFEEFNDSAGNRFSFTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQIIFMKLLPFVFMRQPGKRGKICREIGQTIGQVSFWLVLSPVVVIVGTLLWVASSVYTLF 1047
LT PGA FI G++A PNSYYKVP +RMAL+ +I+ LA ++ VLL + G LT+ E+ FA YV+ A + E EM +D+ YL DRW L++++ F+ R D S WGR LYA+ +PL++ R+L++AQ + G +++++GMA +F +++ VVI+GFAM+ F+L RD A LL F+ +LG+V F++F G + +LLV YLVVMTI+LLNLLIA LSTA+ +VE I V+ R +YR +VA D +PAPFNL Q++ + V + G I R +G++ FWL+L P ++ G +W+ S+ LF
Sbjct: 544 LTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVLLFEKGQLTIAEVAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVKGETIRGA--LLDAFQAMLGEVGLFDDF---VGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTYPIARR---GVGRIVFWLLLGPGAILGGVFVWLVSTPKALF 878
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 228 bits (580), Expect = 3.940e-61 Identity = 140/345 (40.58%), Postives = 206/345 (59.71%), Query Frame = 1
Query: 13 LTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWVLLHKDGPLTVGEIVFAFYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRCTDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVEMIFGMAMVFVRFALILLVVIMGFAMALFSLLRDADNFNFNFADILLLLFKTLLGDVEAFEEFNDSAGNRFSFTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQIIFMKLLPFVFMRQPGKRGKICREIGQTIGQVSFWLVLSPVVVIVGTLLWVASSVYTLF 1047
LT PGA FI G++A PNSYYKVP +RMALD ++ LA ++ VLL + G LT+ E+ FA YV+ A + E EM +D+ YL DRW L++++ F+ R DS S WGR LYA+ +PL++ R+L++AQ + G +++++ MA +F +++ VVI+GFAM+ F+L RD A LL F+ +LG+V F++F G + +LLV YL+VMTI+LLNLLIA LSTA+ +VE I V+ R +YR +VA D +PAPFNL Q++ + V + I R +G++ FWLVL P ++ G +W+ S+ LF
Sbjct: 635 LTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVLLFEKGSLTIAEMAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDSDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVKGETLRGA--LLDAFQAMLGEVGLFDDF---VGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTYPIARR---GVGRIVFWLVLGPGAILGGIFVWLVSTPKALF 969
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE) HSP 1 Score: 205 bits (521), Expect = 9.280e-56 Identity = 167/544 (30.70%), Postives = 262/544 (48.16%), Query Frame = 1
Query: 91 LRMALDFVIYIMMLAVYSFWVLLHKDGPLTVGE------IVFA-----------FYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRCTDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVE----------------MIFGMAMVFVRFALILLVVIMGFAMALFSLLRDADNFNFNFADILLLLFKTLLGDVEAFEEFNDSAGNRFSFTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQIIFMKLLPFVF------------MRQPGKRGKICREIG-QTIGQVSFWLVLSPVVVIVGTLLWVASSVYTLFVPAADLVNRVPSASTLRDSFSGGPPFTRFLTRFLSLYGLLFPGRESLQSTKRLAKLKAEIRLHIGVGGFCALGAPLCLLFLWLREPCFQVFQFIARLTCRRRESRRIHSSSNEGSVEAHEQSTSMFDAKVHGILESTGLGASVLQKYLEDPMIDPVVRPDEVELGATVEHMKLLRNVLE 1584
+RM LD V+YI M+ S +VL H + E +VF +++G +E REM R+ Y ED+WN LD+LS++ L G V R D S G A YAL APL+ R LFF Q GP+++ ++F M + ++F ++ V+++GF MA RD D+F +F D LFK +LGD + F+ F+ G+ + F LLV+ L ++T++LLNLL+A LST++A+V N D+ +V+ R +++Y+ +V D++P PFNL+Q++ + + +Q R K G + I V FW+VL PV V G+LLW+ S +PA + R++ G S K + +R ++ + +C GAP+ LL LWL + ++R C + ++ + H S S ++ + + G+GA L+++L+DPM D VR DE + TVEH+KLLRN LE
Sbjct: 1 MRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTVGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPIIQASGEFRQVAKRNVSHSVVFRMTRILLKFGFVMAVILLGFIMAFHVQFRDFDSFGESFLD----LFKAMLGDNDFFKVFS---GDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVVWPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIEPVVFWVVLGPVAVNGGSLLWMES-----VLPAMYFWRKHHRLQNKRENGGG-------------------------DSKKSMHLWSLFLRYNVIIPCWCVFGAPVYLLLLWLNAS----GRVLSRCPC--------NDDASSTAKSRHGASKSTIESML--LKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLE 493
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Match: A0A6H5KIV5_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIV5_9PHAE) HSP 1 Score: 209 bits (533), Expect = 4.300e-55 Identity = 180/584 (30.82%), Postives = 273/584 (46.75%), Query Frame = 1
Query: 10 SLTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWVLLHKDGPLTVGEIVFAFYVLGAAVRERREMTRDVIVYLEDRWNVLDVLSIMILAGGFVVRCTDSGSPWGRALYALVAPLIFLRVLFFAQYLLFLGPMVEM------------------IFGMAMVFVRFALILLVVIMGFAMALFSLLRDA---DNFNFNFADILLLLFKTLLGDVEAFEEFNDSA---------------------------GNRFS-FTGNLLLVLYLVVMTIVLLNLLIAALSTAYAEVEMNTDKGIEVANVRAVEYYRQIVALDIIPAPFNLVQIIFMKLLPFVFMRQPGKRGKICREIGQTIGQVSFWLVLSPVVVIVGTLLWVAS---SVYTLFVPAADLVNRVPSASTLRDSFSGGPPFTRFLTRFLSLYGLLFPGRESLQSTKRLAKLKAEIRLHIGVGGFCALGAPLCLLFLWL-REPCFQVFQFIARLTCRRRE---SRRIHSSSNEGSVEAHEQSTSMFDAKVHGILESTGLGASV----LQKYLEDPMIDPVVRPDEVELGATVEHMKLLRNVL 1581
SLT+ G QFI+A ++A+P Y VPA+RMA+D ++Y++MLA+++ VL +K+G + VGE+VF YVLGA + E E+ Y++D WN LDV ++ G F+VR D S WGRALY APL+ R LFFAQ++ GPM+E+ IF +A +RF ILLV +MGFAM+ F+L R + +F ++ + LL + +LG+ + +++F +A F+ G LL Y VVM I+LLNLLIA LS AY +V+ N D +V + +Y + V D++P P NL+Q + L +F GK G + R+ G V FW V V+ G++LW S V+ F+ + RV ++ L V FC + PL +L+ WL C +++ + + S ++GS + + + G G ++ L+++L +PM DPVV+ DE TVEH+KLLR+ L
Sbjct: 384 SLTLSAGKQFILAQVVARPAFSYSVPAVRMAVDLLVYLLMLALFAKDVLWYKEGTVEVGEVVFFVYVLGAILVEITELWDGREEYMKDHWNALDVAALAFCGGAFLVRVYDPESLWGRALYCAGAPLLLFRTLFFAQFMPAQGPMIEVKEARGYPSFLRDLGLSLIIFSLAGELLRFCTILLVTMMGFAMSFFALFRHSCTVGSFQTYWSTSIALL-RAMLGETKLYDDFTVAAECCYDAVEPSDEFHCEDFLMECCHSVESEHFNGLVGKALLAAYNVVMGIILLNLLIAVLSEAYVDVKENIDTESKVTRTLVIRHYMKAVDQDMLPPPLNLIQHA-VSTLAMLFGSLMGKTG-VFRKAEFYSGLVLFWFVSGLFAVLAGSILWAISWPRGVFMFFLRRSSHSGRVSGSAQL-------------------------------------------------VALFCGVAMPLLMLYKWLWTSTCGALWRHLVDGGAWSNDGGASAGYDEIRSDGSRRPRPHDDGIIGKTLERYGGTAGQGGALNVHQLREFLANPMKDPVVQRDEETRETTVEHVKLLRDNL 915 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10884.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10884.2.1 >prot_A-nodosum_M_contig10884.2.1 ID=prot_A-nodosum_M_contig10884.2.1|Name=mRNA_A-nodosum_M_contig10884.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=531bp SRPSLTILPGAQFIIAGILAKPNSYYKVPALRMALDFVIYIMMLAVYSFWback to top mRNA from alignment at A-nodosum_M_contig10884:1713..4072- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10884.2.1 ID=mRNA_A-nodosum_M_contig10884.2.1|Name=mRNA_A-nodosum_M_contig10884.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2360bp|location=Sequence derived from alignment at A-nodosum_M_contig10884:1713..4072- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10884:1713..4072- >mRNA_A-nodosum_M_contig10884.2.1 ID=mRNA_A-nodosum_M_contig10884.2.1|Name=mRNA_A-nodosum_M_contig10884.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1593bp|location=Sequence derived from alignment at A-nodosum_M_contig10884:1713..4072- (Ascophyllum nodosum dioecious)back to top |