mRNA_A-nodosum_M_contig1081.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM) HSP 1 Score: 116 bits (290), Expect = 1.350e-29 Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = 1
Query: 46 EDLRSSFPIMDLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAERFEIWKTSVI--PISTGKAPLSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 468
E+L F + DLG S+ LG + RDR R Q+ Y + ERFE+ + + P+ G LSKA P++ EIA M+ +PYR+ VGALM++A TRPD+ + LA+F NPGP HWKA +YL+ T + +TY
Sbjct: 16 EELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYITDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTY 157
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A401H4R8_9APHY (Uncharacterized protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H4R8_9APHY) HSP 1 Score: 123 bits (309), Expect = 1.460e-29 Identity = 65/150 (43.33%), Postives = 88/150 (58.67%), Query Frame = 1
Query: 52 LRSSFPIMDLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAERFEIWKTSVIPISTGKAP---LSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDIM 492
LR +F I DLGE+ + LG + RDR ART Q Y ++ +RF + P++T P LS A PQ AE A MR IPYREAVG+LM+ + TRPD+ + L++F DNPG HW+AV + +YL T L +TYG D++
Sbjct: 1254 LRKAFGISDLGEIHWILGFAVERDRTARTLALSQTSYINSIIQRFGF--EDLKPLTTPMDPNTTLSSAQSPQTTAEAAAMRDIPYREAVGSLMYASLGTRPDITYAVSFLSRFSDNPGRAHWEAVKRVFRYLSGTKDLKLTYGAQGLDLV 1401
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY) HSP 1 Score: 120 bits (302), Expect = 3.340e-29 Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 1
Query: 64 FPIMDLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAERFEIW--KTSVIPISTGKAPLSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDI 489
+P+ DLGEVS+ LG + RDR+ART Q Y ++ RF K S IP+ L+K+ P + A+IA MR IPYREA+G+LM+ A TRPD+ F TLA+F NPG HW+AV + +YL T +L + YGG +
Sbjct: 169 YPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGL 311
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 121 bits (303), Expect = 3.630e-29 Identity = 64/162 (39.51%), Postives = 93/162 (57.41%), Query Frame = 1
Query: 13 SETKQDEHQALEDLRSSFPIMDLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAERFEIWKTSVIPISTGKA-PLSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDIMP 495
++T+ DE + L + + F I +LG V + LG I DR R +Q HY +T+ ERF + ++ LSKA GP++D + AEM PYR +G L +VA TRPD+ F L++F +NPGP HW A ++ L+YLK T G++YGG E+ P
Sbjct: 198 TQTRVDEVKKL--IAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTP 357
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A8H5M255_9AGAR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tricholomella constricta TaxID=117010 RepID=A0A8H5M255_9AGAR) HSP 1 Score: 119 bits (297), Expect = 3.720e-29 Identity = 61/143 (42.66%), Postives = 85/143 (59.44%), Query Frame = 1
Query: 70 IMDLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAER--FEIWKTSVIPISTGKAPLSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDIM 492
I DLGE+ + LG I RDR RT Q+ Y ++ R F+ K IP+ T A LS A P AE A+MR +PY EAVG+LM+ A TRPD+ F T+++F PGP HW+AV + +YLK + L + YGG ++++
Sbjct: 58 ITDLGELHWLLGIEIKRDRDRRTISLSQRSYLDSILRRYGFQDLKPVSIPMDTN-ARLSSAQSPATTAEFAQMRDVPYLEAVGSLMYAALGTRPDIAFAVQTVSRFSKKPGPAHWEAVKRIFRYLKGSTELWLVYGGNQKELV 199
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM) HSP 1 Score: 117 bits (294), Expect = 1.050e-28 Identity = 60/158 (37.97%), Postives = 90/158 (56.96%), Query Frame = 1
Query: 1 LLVLSETKQDEHQALEDLRSSFPIMDLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAERFEIWKTSVI--PISTGKAPLSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTY 468
+ + +++K + E+L F + DLG S+ LG + RDR R Q+ Y + ERFE+ + + P+ G LSKA P++ EIA M+ +PYR+ VGALM++A TRPD+ + LA+F NPGP HWKA +YL+ T + +TY
Sbjct: 141 MTIAAKSKDQDLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTY 297
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A8H7C558_AGABI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7C558_AGABI) HSP 1 Score: 117 bits (293), Expect = 1.100e-28 Identity = 66/168 (39.29%), Postives = 91/168 (54.17%), Query Frame = 1
Query: 1 LLVLSETKQDEHQALEDLRSSFPIMDLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAERFEIWKTSVIPISTGKAP---LSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDIMP 495
+L S T+ E A +L S+ + DLG+ ++ LG I RD Q+ Y + + ERF + V P ST P LS PQ + E EM+ +PYREA+G+LMW+ TRPDL F + L++F +NPG +HW A+ L YLK T G+TY DI P
Sbjct: 73 ILGASSTENGESLAKLELGRSYELKDLGQANFILGMKIERDEATGDITLSQRAYCERILERFHM--QDVNPRSTPLKPHIVLSTDDMPQTEQEKLEMKNVPYREALGSLMWLQVATRPDLSFAVNLLSRFANNPGRKHWDALKHTLAYLKGTVHYGITYS-RNSDIRP 237
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 120 bits (302), Expect = 1.270e-28 Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 1
Query: 64 FPIMDLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAERFEIW--KTSVIPISTGKAPLSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDI 489
+P+ DLGEVS+ LG + RDR+ART Q Y ++ RF K S IP+ L+K+ P + A+IA MR IPYREA+G+LM+ A TRPD+ F TLA+F NPG HW+AV + +YL T +L + YGG +
Sbjct: 1186 YPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGL 1328
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A2G8SUK6_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SUK6_9APHY) HSP 1 Score: 120 bits (302), Expect = 1.270e-28 Identity = 61/150 (40.67%), Postives = 87/150 (58.00%), Query Frame = 1
Query: 52 LRSSFPIMDLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAERFEIWKTSVIPISTGKAP---LSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDIM 492
LR +F I D GE+ + LG + RDR ART Q Y + + RF + P+ST P L+ P+ AE+AEMR +PYREAVG+L + + TRPD+ + L++F +NPG HW+A + +YL T SL +TYGG D++
Sbjct: 1221 LREAFAISDEGEIHWILGFAVIRDRSARTLSLSQTSYIEAIVRRFGL--EDAKPLSTPMDPHVQLTAEQSPKTTAEVAEMRNVPYREAVGSLQYASLGTRPDITYAVSVLSRFLENPGRAHWEACKRVFRYLAGTKSLRLTYGGEQRDLV 1368
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Match: A0A060S8R4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S8R4_PYCCI) HSP 1 Score: 116 bits (290), Expect = 1.370e-28 Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 1
Query: 76 DLGEVSYYLGCHITRDRKARTARFDQQHYAQTVAERFEIWKTSVIPISTGKAP---LSKAGGPQNDAEIAEMRGIPYREAVGALMWVANMTRPDLVFTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDI 489
DLG VS+ LG I+RD +A T Q Y + RF T + P+ST P LSK P++ AE+A MR +PYREA+G LM+ A T+PD+VF TLA+F NPG HW AV + +YL T +L YGG ++
Sbjct: 3 DLGPVSWLLGIKISRDLEAGTFSLSQHAYIDALLARFNF--TDLKPMSTPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGVLMYAALGTQPDIVFAVSTLAQFAQNPGQPHWDAVKRVFRYLLGTRTLSRVYGGEKREL 141 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1081.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1081.2.1 >prot_A-nodosum_M_contig1081.2.1 ID=prot_A-nodosum_M_contig1081.2.1|Name=mRNA_A-nodosum_M_contig1081.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=166bp LLVLSETKQDEHQALEDLRSSFPIMDLGEVSYYLGCHITRDRKARTARFDback to top mRNA from alignment at A-nodosum_M_contig1081:17969..18466- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1081.2.1 ID=mRNA_A-nodosum_M_contig1081.2.1|Name=mRNA_A-nodosum_M_contig1081.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=498bp|location=Sequence derived from alignment at A-nodosum_M_contig1081:17969..18466- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1081:17969..18466- >mRNA_A-nodosum_M_contig1081.2.1 ID=mRNA_A-nodosum_M_contig1081.2.1|Name=mRNA_A-nodosum_M_contig1081.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at A-nodosum_M_contig1081:17969..18466- (Ascophyllum nodosum dioecious)back to top |