mRNA_A-nodosum_M_contig108.45.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig108.45.1
Unique NamemRNA_A-nodosum_M_contig108.45.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 4.830e-96
Identity = 182/343 (53.06%), Postives = 242/343 (70.55%), Query Frame = 3
Query:   12 VVTVSYLVSDESEGAELSIVDRIIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEYGINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLT-DENARQSDYGAYWISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVVI 1037
            V  VSY VS ESEG    +V+R  R VP+ SVKI+IV+WQILTQF S++ + FP VYQ FL A+ L NFDL W++ AGC + ++F+ RLL+ T+ PI+ ++ L A Y  AA  +H SS  ++ V HKHVS+ LL+TFLVY+SVS+VLFQTF CE LDD  +YLRADY IECD+ +H AF +YAGFMI++Y VGIPALY  FLFR+  VL  DE  R+        +DLW PY+P +FYYEV+EC RR+ LAGVV+F +  NT+ QI+V LL+A++FA+I+  L PY S+ D W+  MGHAVV +S++  L+  V V DE   SQ  +  +L+A +  MV VV+
Sbjct:  606 VALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVF-IYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVL 947          
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 6.190e-92
Identity = 184/375 (49.07%), Postives = 254/375 (67.73%), Query Frame = 3
Query:   12 VVTVSYLVSDE-SEGAELSIVDRIIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEYGINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLTDENA-RQSDYGAYWISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVL-VVIRFACCGYGYAKDRTARGFPV*SSPQRRRGK 1127
            V  VSY+ S E   G +  IV+ + R +P+ S+KI+IVSWQILTQF S++ VT+P VYQ  L  + + NFDL+WL+ AGC   +NF+ RLL+ T+ PI+A++LL  TY  AA  N G    + I+ +KHV++ LL+TF VYSSVSS LF+ F C+ LD   DYLRADYSIEC++  HR   +YAGFMI++Y VGIPALYA  LF++R VL DE+  R+       IS+LW PYKP +FYYEV+EC RR+ LAGVV+F +  NT+ QI+VTLL+A  FAL++ GL PY S+ D WIS +GH VV LS++  L+  V V DE   SQ+ +  +L+A++  M+L V++  A   +   ++R +      +SP+ R GK
Sbjct: 1140 VAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVF-IYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSA---ASPRFRSGK 1510          
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 8.930e-92
Identity = 171/346 (49.42%), Postives = 244/346 (70.52%), Query Frame = 3
Query:    6 AGVVTVSYLVSDESEGAELSIVDRIIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEYGINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLTDENA--RQSDYGAYWISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVVI 1037
            A +    +LVS E EGA   ++ R+++R+P+ S+KI++V WQILTQF+S++ VT+P VYQ FL  V++LNFD+ W+  AGC   ++F+ RLL+ T+ P++A+ LL  TY VA  ++ GS  A++ + HKH+SM LLITFLVYSSVS+ +FQ+F CE LDD   YLRADY IECD+  H+AF ++AG MILVYPVGIP  Y   L+++R+VL  E+A  RQ+      ISDLW PYKP  FYYEV+ECVRR++L GVV+F +  NT+ Q++VTL++A  F + +  L PY S+ D  IS +GH +V  S++  L++ V V DE   SQ+ +  +L+A +A MV+ V+
Sbjct: 1402 AAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVF-IYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVV 1746          
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 3.180e-89
Identity = 162/339 (47.79%), Postives = 237/339 (69.91%), Query Frame = 3
Query:   24 SYLVSDESEGAELSIVDRIIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEYGINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLTDENA-RQSDYGAYWISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVVI 1037
            SY +S         +V R+ + +P+ SVKI+IV+WQILTQF S++ VT+P VY+ FL  + + NFDL+W++ AGC + I+F+ RLL  T+ P+I ++ L  TY  A   N G + +++++ +KHVS+ LL+TFL+YSSVS+ LF+ F CE L+DG +YLRADY+I+CD+ +H+AF +YAGFM++VY VGIPALYA  LFR+R VL D +A R+        SDLW PYKP +FYYEV+EC RR+ LAGVV+F +  NT+ QI++TL++A  F +++ GL P+ S+ D W++  GH VV +S++  L+  V V  E   SQ  Y  +L+A +A M+L V+
Sbjct:  889 SYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVF-IFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVM 1226          
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 2.390e-88
Identity = 170/346 (49.13%), Postives = 239/346 (69.08%), Query Frame = 3
Query:    3 IAGVVTVSYLVSDESEGAELSIVDRIIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEYGINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLTDENA-RQSDYGAYWISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVVI 1037
            +  V  VSY+VSD+        V+R+ R +P+ S KI++VSWQILTQF +++ VT+P VYQ FL  + + NFDL+W++ AGC   ++F+ RLLI T+ PI+A++ L  TY  A   N G++  ++++ ++HVSM LL+T  VYSSVSS LFQTF CE L DG  YLRADY I CD+ +H+A  +YAG M++VY VGIPALY V LFR+R VL    A R+        S+LW PYKP +FYYEV+EC RR+ LAGVV+F +  NT+ QI++TLL+A  F +++ GL PY S+ D W+S MGHAVV +S++  L+  V V +E V SQ  +  +L+A +A M+LV++
Sbjct: 1693 LVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVF-IYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIV 2037          
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 4.860e-88
Identity = 164/343 (47.81%), Postives = 238/343 (69.39%), Query Frame = 3
Query:   12 VVTVSYLVSDESEGAELSIVDRIIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEYGINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLTDENARQSDYGAYW-ISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVVI 1037
            VV + Y++S E+    + +++R+   VP+ SVKI+IVSWQILTQFAS + V +PGVYQ FL  + +  FDL WL+ AGC   + F+ RLL  T+ PI AV+LL  TY  A   N  ++  +RI+  KHV + LL+TFLVYSSVSS LF+TF C+ L+DG +YLR DY IECD+ +H+ F +YAGFMIL+YP+GIP LY++ LF++R+VL  + A + D       S+LW PYKP +FYYEV+EC RRI L G+V+F +  NT+ Q+++TL++A  FAL++  ++PY S+ + W++ MGH VV +S++  L+  V V DE   SQ  +  +L+ ++A M+L V+
Sbjct: 1056 VVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVF-IYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVV 1397          
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 1.340e-87
Identity = 169/344 (49.13%), Postives = 231/344 (67.15%), Query Frame = 3
Query:   12 VVTVSYLVSDESEGAELSIVDRIIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEYGINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLTDENARQSDYG--AYWISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVVI 1037
            V  VSY+ S E  G    IV+R+ R +P+ SVKI++V+WQI+TQF +++ VT+P VYQ FL  + + NFDL+W++ AGC   ++F+ RLL+ T+ PI A +LL  TY  A   + G++  +  V HKHV M LL+TF VYSSVS+ LF+TF CE L+DG  YL ADY IECD+ +H+ F +YAGFM+L+Y  GIPALY+  LFR+R VL    A   D    A   SDLW PYKP +FYYEVVEC RR+ LAGVV+F +  N+S QI++TL++A  F LI+ GL PY S+ D WI+ MGH VV+ S++  L+  V V  E   SQ  +  +L+  +  MV+V +
Sbjct: 1240 VAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVF-IYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXV 1582          
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 5.810e-86
Identity = 161/343 (46.94%), Postives = 238/343 (69.39%), Query Frame = 3
Query:   12 VVTVSYLVSDESEGAELSIVDRIIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEYGINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLTDENARQSDYGAYW-ISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVVI 1037
            VV + Y++S E+    + + +R+   VP+ SVKI+IVSWQI+TQFAS + V +PGVYQ F+  + +  FDL WL+  GC   ++F+ RLL  T+ PI AV+LL  TY  A   N  ++  +RI+  KHV + LL+TFLVYSSVSS LF+TF C+ L+DGN YLR DY IECD+ +H+ F +YAGFMIL+YP+GIP LY++ LFR+R+VL  + A ++D       S+LW PYKP +FYYEV+EC RR+ L G+++F +  NT+ Q+++TL++A  FAL++  ++PY S+ + W++ MGH VV +S++  L+  V V DE   SQ  +  +L+ ++A M+L V+
Sbjct: 1116 VVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVF-IYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVV 1456          
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 9.210e-83
Identity = 153/343 (44.61%), Postives = 232/343 (67.64%), Query Frame = 3
Query:   12 VVTVSYLVSDESEGAELSIVDRIIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEYGINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLT-DENARQSDYGAYWISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVVI 1037
            V  VSY+          ++   + R +P+ ++KI++V+WQI+TQF S + VT+P VYQ FL  + + NFD++W++ AGC   ++F+ RLL+ T+ PI+A++ L ATY   +  N G++  +++V  +HVSM LL+ FLVYS VSSV+FQTF C+ L+ G +YLRADY IECD+ +H+ F +YAGFMIL+YPVGIPA Y   L R+R VL  D + R+       IS+LW PY+P ++YYEV+EC RRI L G+V+F +  NT+ QI++TL++ ++FA+++  L PY    D W+S + HAVV +S++  L+  V V +E   SQ  +  +L+A +A M+L V+
Sbjct:  646 VAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVF-IYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVV 987          
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 1.280e-82
Identity = 170/346 (49.13%), Postives = 234/346 (67.63%), Query Frame = 3
Query:    6 AGVVTVSYLVSDESEGAELSIVDR-IIRRVPVHSVKIIIVSWQILTQFASLSRVTFPGVYQGFLGAVHLLNFDLTWLILAGCEY-GINFYARLLIMTLCPIIAVVLLGATYLVAADKNHGSSRAI-RIVGHKHVSMALLITFLVYSSVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYPVGIPALYAVFLFRNRKVLTDENARQSDYGAYWISDLWMPYKPWLFYYEVVECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDGWISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVV 1034
            A V T  YL+S E E   +    R   + +P+ S KIIIV WQILTQFA+ + VT+P VYQ FL A+ ++N DL  +I AGC + GI+F+ RLL+ T+ P++A+ +L +TYLVA  +N  +  AI  I+ HKHV++ L +TFLVYSSVSS++FQTF C+ LDDGN+YLRADY I C T +H A  +YAG M++VYPVGIP LYA+ LF++R +L + +A ++  GA  I+ LW  YKP  FYYEV+EC RRI L GVV+F +  N + QI++T+L+A+ F  +   L+PY S+ D W+S  G  VV LS+F LL+  V V  E   SQ AY  +L+A +  M L +
Sbjct:  664 ATVATFRYLLSTEFEERNIGCFHRKTFQAIPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATAGHAIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANASADKA--GAQPIASLWEAYKPERFYYEVIECGRRIMLTGVVVF-IYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAI 1006          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig108.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Z8_ECTSI4.830e-9653.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE6.190e-9249.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY65_9PHAE8.930e-9249.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G301_ECTSI3.180e-8947.79Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G5Y7_ECTSI2.390e-8849.13Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2X5_ECTSI4.860e-8847.81Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D8LSC0_ECTSI1.340e-8749.13Polymorphic Outer membrane protein G/I family n=3 ... [more]
A0A6H5K7Z1_9PHAE5.810e-8646.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHH1_ECTSI9.210e-8344.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FM10_ECTSI1.280e-8249.13Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig108contigA-nodosum_M_contig108:584236..590146 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHQ8
PFAMsBeta_helix,Chlam_PMP
Model size3909
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons3
Evalue4.48e-74
EggNOG OGs2BFIX@1|root,2S176@2759|Eukaryota
Cds size816
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866466.3629677-UTR-A-nodosum_M_contig108:584235..5843781680866466.3629677-UTR-A-nodosum_M_contig108:584235..584378Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig108 584236..584378 +
1680866466.3721132-UTR-A-nodosum_M_contig108:586367..5865081680866466.3721132-UTR-A-nodosum_M_contig108:586367..586508Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig108 586368..586508 +
1680866466.399381-UTR-A-nodosum_M_contig108:587324..5880311680866466.399381-UTR-A-nodosum_M_contig108:587324..588031Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig108 587325..588031 +
1680866466.4097424-UTR-A-nodosum_M_contig108:588044..5901461680866466.4097424-UTR-A-nodosum_M_contig108:588044..590146Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig108 588045..590146 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866466.3808606-CDS-A-nodosum_M_contig108:586508..5873241680866466.3808606-CDS-A-nodosum_M_contig108:586508..587324Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig108 586509..587324 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig108.45.1prot_A-nodosum_M_contig108.45.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig108 586509..587324 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig108.45.1

>prot_A-nodosum_M_contig108.45.1 ID=prot_A-nodosum_M_contig108.45.1|Name=mRNA_A-nodosum_M_contig108.45.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=272bp
MTLCPIIAVVLLGATYLVAADKNHGSSRAIRIVGHKHVSMALLITFLVYS
SVSSVLFQTFDCEVLDDGNDYLRADYSIECDTFRHRAFMIYAGFMILVYP
VGIPALYAVFLFRNRKVLTDENARQSDYGAYWISDLWMPYKPWLFYYEVV
ECVRRITLAGVVLFFVGDNTSTQISVTLLLAILFALIAGGLTPYDSQLDG
WISCMGHAVVILSLFFLLVTDVQVLDEAVISQDAYGWILIALNASMVLVV
IRFACCGYGYAKDRTARGFPV*
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mRNA from alignment at A-nodosum_M_contig108:584236..590146+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig108.45.1 ID=mRNA_A-nodosum_M_contig108.45.1|Name=mRNA_A-nodosum_M_contig108.45.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5911bp|location=Sequence derived from alignment at A-nodosum_M_contig108:584236..590146+ (Ascophyllum nodosum dioecious)
CGATTGCTGGGGTCGTGACGGTTTCGTACCTCGTGTCGGATGAATCGGAG GGAGCGGAGCTCAGCATCGTGGATCGCATAATCCGTCGAGTACCGGTGCA CTCGGTGAAGATCATCATTGTCTCGTGGCAGATCTTGACTCAGGTGCGCG GGCCGAGCCTTGACCTCGATCGATTTCATTGTTCACGTTTCTAGGTACAC GCCTAGCTCTAGAGACTTGTCTCATGTGTTGTGTTCAGTGTGTGGAGGTG TCCTGGGGGCATGTAGGCTATTGGATGTCGATTCAAGAGCGAGGATTACC AGAGCCATCGCACAGCATTTGTATCTAGATCTGGTTTCGATTGAGTAATG GAGGGGGGGGGGAGTTGAAGCTTAGcccccCCCCCCCCTCCGCTCTCTTG AACCTTGCGGCGATCCGCCCCCTTCCCCACCCGTCAACATCTTGAAATAA TCTACAACTACATTCCGGAGCTTTTTGGGCCGTTTATGTCTCTTTCTTTC AAGTTCTAATGCTTTTATATATTTTTTAAGTAGAGACTTGGATCGATCAC TAATATTTAAATTCCATATTCCGAAGGGTTTCCATTTTATTTGTCTCACT TTTGTTTTTTCTTGCACTTTTGTCTTCTCGGAAGAAAAAAAAAGTTTAGG GTTTTGTCTCCCTGTTAAAACCTGGGAACGCAGCTTCCCTTCCCTGGCTT TAATGACGTGAAAACCCCGAGGTATACCGTATGGGGAAAAGTGACTGACT TGTTCGTTTACCGATGGCAAAAAAATGTGAACGATTTCGGTGTACTACGT CGCCGTGTCGAAACACTCGCATATATATATTTTTTGGCCGATATTTCATA ATGAAAACACGGGATTTAGTGGGGGATAAATTTTGTACGGAAACACGTAG GAATAAAACCGGGGTCTGATATACCCGTTTCCTGTCCTCGACCAAAGCCT AAACAAGCACATGCACGTCTCAACCAAAACTGAACCTTTTTGTCCGAAGA GCGAAGAAACAATAGCAGCCAAGACTATGTAGCTATAAAACCTCTTTGTC CAAAACAGTTGATTGGGTGGATATATATATACTGAGTATATATTATGTAT ATATATATATAACACAGCAAACTTTAGGAGAGGGGGGGCAACACTTCGTA GCAAGGTGATCCACGCTCAACAACGAATTATGCTGCTAGTAGGGCTTACA CAGTCTGTTTATCCATCGCTCGCGCAACACCGAGAATATCGTAATATCCT CTGAGTTCCCCCCGCGAGGGGATGAATATTTTTTGCGGAAAACGATCACC ATCACCATCACCCCGGGGGTAACTCAAAGGTAGGGGGGGGGATCTTTAAA AAAATAAAAAACATCCCGGGGGGAAAAGTCCCTGGGGGGATCGATCTTCC GAAAAGCACACGCAAACGCTCGGACTTTTCCGATATTTGTTCATTTTTTG TGCAACAAACATTTTTTCCCCCCTAACTGGGGGATGCTCAGAAGGTCTAG GTGAGTTCTGATTTTTCTTTAAACAGCAAATAATTGACAAATGACGGAAG GAATATTGCCGATTTTTCTGTGTTTCCCCCGGGGGCGGGCATTTTTTTTT GCGAAAAAAGATCCCTCCGGGGTTAACTCACAGGTAGGGGGGGGATTAAA AACAAAACAAAAATAAACGGGATAACTCAACGTTTTTATGCCCATTTCGG CCATTTTTTTGGGGGGGGGAGGGGACTCAGAGGATATTACGGTAACTCGC GCAGCTACCCGTGCGCTCTTCGAAAGCAACTGAGCCGTGGTAGGAGGGAT GATCCACTGCAAGTTTGAACGAATTGGGATTAGATACCTTGAGTACCCAG TAGCACTTTGTCCAGCCTGCACGACGACTAGCTGACAACCGCGTAAGAGC GCACGCCTCCAGTAAAAGCGAACGCTTCCAAAAGCTAGAAACTCTTTGCT TCCGCGTGTGATGGTTTCGAACTTTGTTTCAGAGCACAAGTGCACAGACA GAGTCCGTGCTCCAAAGCGGTGAAGAGGTACTTGCATCACAAGCGATGGC GAACCTTTTCACCTCCTCGACTAATTCTACCTTTCGTTCGTTGCTCCTTT TGCTCATGTGGGTGTGTCTTCCGCGCATGTAGTTCGCATCCCTGTCACGC GTCACCTTCCCCGGCGTCTACCAGGGCTTCCTCGGCGCCGTGCACCTGCT TAACTTCGATCTGACGTGGCTCATCTTGGCCGGGTGCGAGTACGGCATCA ACTTCTATGCTCGGCTGCTGATTATGACGCTCTGCCCCATCATTGCCGTG GTCTTGCTGGGCGCAACGTACCTGGTAGCCGCCGACAAAAACCATGGGTC GTCGCGGGCGATCCGGATTGTGGGCCACAAGCACGTGTCCATGGCCCTCT TAATCACGTTCCTGGTGTATTCCAGCGTCAGTTCCGTCCTCTTTCAGACG TTCGACTGCGAGGTCCTCGACGACGGCAACGACTACCTGCGGGCGGACTA CAGCATCGAGTGCGATACCTTCAGGCACAGGGCTTTCATGATCTACGCGG GGTTCATGATCCTGGTATATCCGGTGGGGATACCAGCGCTTTACGCCGTT TTCTTGTTCAGAAATCGCAAGGTGTTAACAGACGAGAATGCCCGCCAGAG TGATTATGGTGCGTATTGGATATCGGATCTGTGGATGCCGTATAAGCCCT GGCTCTTCTACTACGAGGTAGTCGAGTGCGTTCGACGGATCACGCTCGCT GGAGTGGTCCTGTTCTTCGTTGGCGACAACACATCGACGCAGATCTCGGT GACTCTGCTCCTTGCGATCCTGTTCGCACTGATCGCCGGGGGTCTGACGC CCTACGATTCCCAGTTGGACGGCTGGATCAGCTGCATGGGGCATGCCGTA GTGATCTTGAGCCTATTTTTTCTTCTGGTAACAGACGTACAAGTTCTCGA CGAAGCCGTGATCAGTCAGGATGCGTACGGTTGGATCTTGATCGCCCTCA ACGCTAGCATGGTTTTGGTCGTCATTAGGTTCGCTTGTTGTGGCTACGGG TATGCGAAGGATAGAACGGCGAGGGGTTTCCCCGTCTAGAGTTCACCGCA ACGTAGAAGAGGCAAGCGAAGCGATCGTCATGAGTGCAAGTTAACACGTT ATTTTTGTGGGATGCCGACATGAGTAACCTAGAAATCCCGCCAATCGATC GCATGGGAACGTACCAAAAGCTAAAAAACGCATCTCGGTTTGTGATGCAG TATTATCGTTTATTTAGGTTGAATCTGCTGTGTCCGCTTGAACCCGGGGA GACTCGGGCATCAAGTGCTGTCAGGATCTGCGGTGATTTTGATACTACTG TATTACATGCTGTAAACTAGTGCTTCTCAGACAGCTCGTTTCCGTTTTCT CACAACCTTTATAATCCCGTCGCAGTAGCGCGCTCTCTAAAGTGAAAATG AGGCCTACACTCGAACTTGAGGTAGCTTGGAGGTGTCTCGAGTCTCACCG ATCGTTATATGTTTTTACCACAGGGGAGTTTGTAGCGTTGCCGAGGCCAT TACAAAGAGGTATTTGCACGTAAAATACGGTAACTTCTAGGATACAATAG ATGTCGTGATATGGGGTGCAATCTCGTCGCTGCAACGCGTCCTCCAATAT ATGGAAAGAGGGGGCTTACAGTTTCGAGGATTGGCGTAGCTTGTAGGTGA CTCGAGTCGCACCAATTTCTTTCTTCTAAATGGTGGGAGTTCGTAGCTTT GTCGAGCCCACTTCAAAAAGCGATTTTCGCCTATTATAGAATAGTAGTAT ATAATGACTTCATGACTTCTGGGAATATCAGCTCTACAGCAGGTACCATG ATTTGAGGGTACAAGTGTCGCTGATGCAGATGAGCCCACAATATATCAAT CAAATACTCGGTCGGGAAGATGGTTAGCATCAAGTGGTGTCAGGAGCTGT GACGGTTTCGTTTGCACTGTTATATAGTAAACGCGTGAACAAATGTTTTT TGCGGCTCTTTTCCGTCGTCTGCGCAAAAGCTTTGCAATCATGTCGCAGC AATACGTGTGCTCGTAGTCTAAGGGGGGAAAGGAGCTGAGGTGACTCGAG TCGTTCCGAACGTTATTTATGATAAGTAGTTGTTCCTCGGGAGTTTGTAG CATTGTCAAGGCTACTGCAAAGATGCATGTACTATTATATAGTATATTAC ACTCGAATATATTTTCTGGGAATGCAAGATATCGTGGTGTCGGGGCGATT GATATACTTGTAGTGGGTGAATCTAAGGTGTCAGCCAATGTCCCGAGAGA CTTGAGCATCTAGTGCGGACAGGGAGTCCCGACTATTTTTTATGCTTCTG TGTTGTTCATGCTTGAACTTAACGCTTCTTCGGCGACTCGTTTTCGTCTG CGCAAGGCCTTTGTAACCCTGTCTCGCGGCAACACGCGATTCAGTGAGCA AGGGGGTATTGCCTTGGAGACCGTTTACACAGCTTGGAGGCGATTCGAGT TACCCAGTGACCGTTTTATGCAAGTATTCGTCCCATACCTCAGGGAGTTT GCCGGGTTACCGAGTTGGTTGCAAGGAAGTGGTTTTTGCACTTAGTATTT ATATCACAATTACGGGATTACAATAGATATTTATGTAGTGCGGGTGCAGT GTCGTTGATAAAGTTAAGCCCAAGGTGTCAGTTAGGACTCGGGAGGACTC GAACATGAAGTGTTTTAAGGAGAGTTGTGGGTAATTTGATACACTAGAGT ATACGTATGAACTGATGCTTCTTTCAGGCAGCTTTTTTCTGTCTGCGCAA AGCCGTTGTAGTCTCGTGGCACAGCGACACACGACCCAACGGGGTAAGGC TTGCGGTTTTCTAATTTTGTAAGGTATGATAATAGGTGTGGGATGACTCC AGTCTTCTTACCGACCGCTGTTCTATATTCGTCCTTCAAGGTAGCTCATG ATGTTTGAGAGGCCACTGCAAGGTTTCATTTGTCCGTACTGATCTATTGA TCATTATTACTTTATGCTTCTGCAATCAATCGCCATTCTTGCTGAACGTG GTGCTAACCCTTGTGGTACACTAAATGGCTTTCAATTGAGATATCGTTGG TTGCCGCGTCGGAAAAGGCGCAGGGTATAAACGGACCTAGACCGATAATG GCGGGTGGGAACTAAGGAAGAACCGGTACTTCTAGAGCTTGCTAAGCACA CAGAATCATCCCGTAGCCCACTTTGCCACCACGAAGCTTAGAAAATATTC ATTCGCTTCGTATGCGTAGCTCCAAGGCTAGTCAGAGTGTTGTGATGGCG ACGCGACGGTAGACCACTAGTGCCGAGCGTCGAGGAGCTCACGATCCCGT CGGACTGAGAACTGAACTCAGGCCCAACTGGCCTGTGTTCCCTATTTAAC TGGAATGCTTGGCCGGCTAGTTAAGCAATTAGGCCACGAGGTTTCCTAAC CACAACTCTGCACATTTGAAAGACGTCTTGGCGCGGCAAAGGGGGCAGTG GATTCTATGACTAATGGATGCAAGCAATATGAAGCTAGATGATTCCAACA TTCTGTTTTTTCGTTGTCCATCAAATCGCAAGCTTCGTGTTGCGATCCAA GAGGTGGAAGTGGAGGTTCACCGTTGCTTTTTCATTTGTTATCTTCTGCC TCTGCCTTGGCAGGGGAGGGTGAGTGTAGTGGGACGTTTGGCAACACGAC CCGACATTTCTGCTGCATTTCAGTTAAAGCCAATCATGGTATTTTTTTAT GGTTGTCATTATGATTTCTTTCGGTGGTAGCGCTGCTTCAGCCTTGGGGC TGAAAAAACGTTGGGGTGGGGGGAGGCGTTCATTCCGGCCAATCAATGTG TGGAAGCGTGTTTATCTGATGAAGTTTAGCGGATGTGGTACTCCTGCTAC TACAGACAACG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig108:584236..590146+

>mRNA_A-nodosum_M_contig108.45.1 ID=mRNA_A-nodosum_M_contig108.45.1|Name=mRNA_A-nodosum_M_contig108.45.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at A-nodosum_M_contig108:584236..590146+ (Ascophyllum nodosum dioecious)
ATGACGCTCTGCCCCATCATTGCCGTGGTCTTGCTGGGCGCAACGTACCT
GGTAGCCGCCGACAAAAACCATGGGTCGTCGCGGGCGATCCGGATTGTGG
GCCACAAGCACGTGTCCATGGCCCTCTTAATCACGTTCCTGGTGTATTCC
AGCGTCAGTTCCGTCCTCTTTCAGACGTTCGACTGCGAGGTCCTCGACGA
CGGCAACGACTACCTGCGGGCGGACTACAGCATCGAGTGCGATACCTTCA
GGCACAGGGCTTTCATGATCTACGCGGGGTTCATGATCCTGGTATATCCG
GTGGGGATACCAGCGCTTTACGCCGTTTTCTTGTTCAGAAATCGCAAGGT
GTTAACAGACGAGAATGCCCGCCAGAGTGATTATGGTGCGTATTGGATAT
CGGATCTGTGGATGCCGTATAAGCCCTGGCTCTTCTACTACGAGGTAGTC
GAGTGCGTTCGACGGATCACGCTCGCTGGAGTGGTCCTGTTCTTCGTTGG
CGACAACACATCGACGCAGATCTCGGTGACTCTGCTCCTTGCGATCCTGT
TCGCACTGATCGCCGGGGGTCTGACGCCCTACGATTCCCAGTTGGACGGC
TGGATCAGCTGCATGGGGCATGCCGTAGTGATCTTGAGCCTATTTTTTCT
TCTGGTAACAGACGTACAAGTTCTCGACGAAGCCGTGATCAGTCAGGATG
CGTACGGTTGGATCTTGATCGCCCTCAACGCTAGCATGGTTTTGGTCGTC
ATTAGGTTCGCTTGTTGTGGCTACGGGTATGCGAAGGATAGAACGGCGAG
GGGTTTCCCCGTCTAG
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