mRNA_A-nodosum_M_contig1075.4.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1075.4.1
Unique NamemRNA_A-nodosum_M_contig1075.4.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1075.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1075contigA-nodosum_M_contig1075:69294..87293 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FUZ0
Model size2448
Max annot lvl2880.D7FUZ0|-
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.33e-05
EggNOG OGs29ZCP@1|root,2RXW0@2759|Eukaryota
Cds size1248
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866462.2207932-UTR-A-nodosum_M_contig1075:69293..693441680866462.2207932-UTR-A-nodosum_M_contig1075:69293..69344Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1075 69294..69344 +
1680866462.2301486-UTR-A-nodosum_M_contig1075:84896..849151680866462.2301486-UTR-A-nodosum_M_contig1075:84896..84915Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1075 84897..84915 +
1680866462.2481468-UTR-A-nodosum_M_contig1075:86163..872931680866462.2481468-UTR-A-nodosum_M_contig1075:86163..87293Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1075 86164..87293 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866462.2389624-CDS-A-nodosum_M_contig1075:84915..861631680866462.2389624-CDS-A-nodosum_M_contig1075:84915..86163Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1075 84916..86163 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1075.4.1prot_A-nodosum_M_contig1075.4.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1075 84916..86163 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1075.4.1

>prot_A-nodosum_M_contig1075.4.1 ID=prot_A-nodosum_M_contig1075.4.1|Name=mRNA_A-nodosum_M_contig1075.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=416bp
MEEARGERDGHISKKALPQRKHPRCTFEMCPKASSFGVPGSRKREFCGEH
APAGMVNLSATKCVHPRCSKMPSYGVSGTKRKEYCSEHAVEGMVNLRSKM
CGHPGCMKQPSMGIAGSKMREFCVAHACEGMVCLISRKCKHSGCDKKAKL
GVAGTSKPDYCAEHAPEGMVGVRARAKCRLQGCHKRPSFGVARTGKPLYC
SQHSEAGMVNCIMIFCKYDECYTQASFGLAGSKKGEFCSKHAPGGMVNVK
YKKCSHRGCSKHPSYGDAQSGKLECCAEHASEGMVDVRRKKRCSHRGCQK
LPSFGEYGNEKMEFCAKHATKGMVNLTQKCSYQQCMARPLAGAVFGGSSM
GYCVEHAFNGLTSMSSKTTLPRKRKEDAAGARAVGAPPNDNGTEKRKRSR
APTILAISSEGGAST*
back to top

mRNA from alignment at A-nodosum_M_contig1075:69294..87293+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1075.4.1 ID=mRNA_A-nodosum_M_contig1075.4.1|Name=mRNA_A-nodosum_M_contig1075.4.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=18000bp|location=Sequence derived from alignment at A-nodosum_M_contig1075:69294..87293+ (Ascophyllum nodosum dioecious)
CTCCACCATCCACACCTTCAGCAGTACAAGGACATACGACACCAATCGAA GGTATGACTACCGGGGAGGTGAAATGATTTATTACTCGTATCTTGTAATC GTGCTATCGCTATCTTCCATAGTAGTACTCGTGCTACAAACTGCTTGACA GTGTGCTGTATTATCTACTGGTACATAGAATTTAAAGTATACCGGGTTGT GATAAGGTTACTATTACACCACAGGGTAAAAGTCATTTGACGATTATTAC CACTCGGTGATCAATCTTTACAACACTCTCCACCCACAGAATTTGACTAG CCGGTGATCAAACGAGGTGATCAAACGGACTAGTTAATTCGATAAGGTTT TGAGTGGCGGAGCATAATCGCTTTCTTTTTCATTTTCATCTCCAACCGAT ATTCTACCCAGGAATTCGGTGAGGTAAAGAAGCTAGCTCAGCGGGATTCG AACCCGGTCCTACCGTCGGCGCTAGTGTGATAAGGGAGGGTACTATGGTA CTACTATGTTGATGATGTGAACTCACTGACCTGGAATTCTACACAGTCCA TACTCCGTATTTTGTATTTTGTAATTGCAGCATGCTGATGCACGAACTTG TATGTACCTGTGTAGGAGTGTTAATACGTGTAGAATGCAAAATTTCGAGT CCGCCGGCGTACTGTCGAAGAATCCGAGGATCCTTCATTTTAGTTAAAAA TAGAACCGGTGTTGGTTCGAAGCAAACACTGCGGAAAAGGGGAACATTTT GAACACATGAATCAATCTCATGCCGATTGGTCAGATGACAACACATTCTG ACAGTCTCGCCTTTTTCGACTTCCGGAGGGCCAGGAGGGCACGAGGCAAT TTTGTTGTCGCAAACAATACCTGGTAGGTAGGTACGCTAGTAGTACAACA TGTTGCCTGAAATTATTCTCAAGATTTTCAGATGGCCGGAAATGTACCAT CTTGGCAAAATCTTGGCCCAAGCCTCGAAACACACACCTCCCAACACCCA ACGCACACCCACCCATCCTTGGCTTCGCCCCCCGACCACCACCACCACCA CACAACACCACACAACACCCACCACTCACCGACACCGACGCCCACCACAC CAACGAACCCAACCCAACACCAACACTACCCAACCCAACACAACGCACAC CCACCCACCCTTGGCTTCGcCCCCCGACTACCACCACCACTACCTACCAC CGCACAACACCCACCACTCACCGACACCGACGCCCACCACACCAACGAAC CCAACCCAACCACAACACTACCCAACCCAAACCAACCCAACTCAAGGACA CGTCGCAACCCACCTCATCTAGCGCCGTCGTTAGATACGGACCGAATTGA ATACCGTCCTCGTGGCATGGGTAGACGCTCTGGCCGTGGGCTACCAACCG GCCACCGAGCAGGGGGCAAATAGTCAACACCCGAGTCCCAAAGTGTAGCA TACGCAATTTCAGAAGGTGGCGCGTTCTGGTTTTCTTTCGAGGAATATTT TGGATCAAGAGAACTGAGATCACCCAACCCAAACCAACCCAACTCAAGGA CACGTCGCAACCCACCTCATCTAGCGCCGTCGTTAGATACGGACTGAATT GAATACCGTCCTCGTGGCATGGGTAGACGCTCTGGCCGTGGGCTACCAAC CGGCCACCGAGCAGGGGGCAAATAGTCAACACCCGAGTCCCAAAGTGTAG CATACGCAATTTCAGAAGGTGGCGCGTTCTGGTTTTTCTTTCGAGGAATA TTTTGGATCAAGAGAACTGAGATCACCCAACCCAAACCAACCCAACTCAA GGACACGTCGCAACCCACCTCATCTAGCGCCGTCGTTAGATACGGACTGA ATTGAATACCGTCCTCGTGGCATGGGTAGATGCTCTGGCCGTGGGCTACC AACCGGCCACCGAGCAGGGGGCAAATAGTCAACACCCGAGTCCCAAAGTG TAGCATACGCAATTTCAGAAGGTGGCGCGTTCTGGTTTTTCTTTCGAGGA ATATTTTGGCTCATTCCTGGAGACTACAGATTTTTTTTCGAGGAATATTT TGGATCAAGAGAACTAAGATCAGTACATGAGGAGGCGTACCTTCCCAGAA ATGGATAATGCCTAGTGCTGTAGATACGATGTCTCCTGCTGTACGTACAC ACGACTGTGTTCTCTGCTGCACTCACACACGCATAGAGTCACACAAACGT TGCTCCAAGAGCCTTGACGCGAACGTGTGTGGCAGGACTGCTGTACTCGC CGGTATGGCCTCTTGTTGATGTAAAGGTCTTCCGAGTTTTGCAGCGCGCC ATCAATACCAGTAAAGCCGGCCCCAATGTATCAGTGACTGACCCCGCCCA TTGACCCTTCTGAGACTTCGCGTGTGTTTACTGATGATCTGGAATGATCA TTGATTTTTTTGTTTTCAGTCCGGGCTCGTCGGGTAGGGGATGATTGATT GATAGTTTCGGAACCCGACATGCAAGGAGCTGTCAAATAGCTGCGAGAGA ACGTCCACGCGCTGGTAGCAAGCACATGGCCACGTTCCAAGCAGTAGCTC AAACGCAGAGTGGATGTCTAATGGCTGCGAGAGAACGTCCACGCGCTGGT AGCAAGCAGATGGCCACGTACCAAACTAGGTCTGCTCACGTCGCTAGCTT GCTCCTACACACTACCCACTATGCAGCAGTACTGGTCGTGGAAATCTGAT ACCAGGTACTTAGTACCAATACAAGCAAAACTTGTGTACTACTACTATTT AGTGTAAGGACGTCCAACGAACTTATGTCCAGAATGAATGAGTACCGCGA GCAACGCTCGCGCATATTAGTTCTTCGCTCGCGCATTAGCTTTTCGCGAA GGGTTATCGCTACGAAGGCATGCTAACACACACACCGCACCTCTGTAAAC TTTTACACTTCACACCATATGTCTCTCTGCTTCAGACAGACACCTTTCGT ATGCAGCCCCCGATATGTGTACCCAATTATGTAGCTATATACTCGGAAGG TGGCAAAATTTCACCCCAAACACCAAATACCTTTCCCCACATTCGTCCCC GGTAGGCAGACCTTTTTACTATAGAGCTACAGGACGCACTCTGTTATCGA TTATACTTGCAGCATTTGTACTGTATGAGTACGAGGAACAGGGATGATTT TCCTCGCCTCTAGTGAGCTCTAGACTCTGTGAACGTACTCTACCTTCGAA GCGTCTACATCTTCCGGTTATCGTTGAGCCCTGTGTTGCTGGCGAACAGC TCGACTTTACTGTCTTTGAATATACATCCTGTCTTTGGCCTCTTAACGTA GCAGGGTGGGAGATTGCTTCGACATGAGATGAAGTACCATAGTGCGCTCG GCGGAGGCCGTCGCAAAGAAAGGCTTCGTAGGGATCCCGCGGTCGAGGTG GGGTGGAATCAATCGTCACGCTGTAATTTGGAGAGATATTTCCTATAGAA AACATTCTGGTTACGTTTTTTTTTGTTACGTTTTTTTTGGTTACGTTTTT TTTGTTACGTTTTTTTTTGTTACGTTTTAGTGGAGATATATGTCCCTATA TACATACTATGATGACCCCGAACCCCTGATTCTGGAACCCAACCAACATT ACTCAACTCCACAAAACCGGCCCAACTCAACCCCACCGACCGAACCCATA CAGACACAACCCAACCCACCTTACCGAACCCACCACTCACCACACACCAC CCACCCACCACACCCACCCCACCTACCACCCAGAAGGTGCTTTGCACCTT TGCCTTCGCCCCCCGACCACCACCACCACCACCACCCAACCCACCACGCC TACCCCACCTACCACCCAGAAGGTACTATGCACCTTTGCCTTCGCCCCCC GACCACCACCACCACCACCACCCAACCCACCCGCCCACCCCACCTACCAC CCAGAAGGTACTATGCACCTTTGCCTTCGCCCCCGACCACCACCACCACC ACCACCACCCACCACCACACCACCCAACCACCCACCACCACACCACCCAA CCACCCACCCACCCACCAATTCGGTACGAGTGCGTGTTTTATCACAGATG TATTTGTAGTATTGTTAAAAACTACGACCCTGAAGCTCAAATGAACGAAA CAAACTAGTAAAGGAAATATAATCGCGCATCCGAGACAAGAGAAATGTTG ACACTATGCTACTATTAATATGACATTGGGGAACCCATTCAATCCCATAA AGTGTTTTTGTCCCTACAGCCAATATTTGCTTGTTTGTATCTCGCTTATG GCCAATGAACCTCAACGTGCTAGGTTACCAATCCCACCTACTGCAACGTT GTCATCCTGCCTGTGGTCCCGAAGGATCTTCCCATCTCTCCCTGGTTTTC GGCTTAGATTTTTTTTAACGCGAATCAAGTCAGAACTCTTACAACTCGTC TATCAATGGTTGAATTTTATTTACTCACGTTCACACGCTTTCCGTTACGG AAGAAAGAACACAAATTCTAGTTTTCACAAGAGTCGAACTCACGACTTCC GCATTAGCAGTGTATGTGATTACCTACTAGACCACTAGGGCGACGTGCTT ATGTTCCCACCTAAACGTCTTGACATATTCCACCCCCGACTGGGTGGGGA TGCTCAGGGGTATTCTAGACCTCATAAAAAATATGGAAAGCTTGGAAAGT TTTCAAACTTTCCAAACTTCCACCTTCCAAAATTTGGAAAGTTGGAAAGT TTGGAAAATATGCGTGTGCTGTTGCAACCCCTCTGGTCCCTCTGGGGTGC ACAGATGGCCACGGAAATAAGGATAGCTCAGCTCAAGTCAGCTATACTAC GGAGGTGCCCATATCTTCGTACCTCGATGGCTTCTGTGTGCGCCTCTTCT TGCGAACGGGGTATGCTCAGGATAAACCAACATCTACTGCGGTGGTATTG GAATCTTCTGTCTCAGGGATTCCTCTGGGCCCCAAAGCCGAAAACGTTTT CAGAATGTTCCGAGGCACATCGTACTATCCAAAGCGGGGTTTCCCTTTTC CAAACCTTTACCTCAACTGCTGACATAATCGGTCTAGAATACCTGTCTCC AAATTTGGAAACGTTTATTTCGGCCTAGAACGGCCCTCAGAACGTTTAGA TGCGTTCAGGTTTTTCTTTAAACAGAGACTAAACTCGGACTAAAAACAGG AGGCTGTCGAAAGTGGATGACATCTATTTTAACGACTTCCCGTTTTTCAA TTTCCATTCGGAAATATTTCAGAGTTCTTAGAAATTGAAAAAAAAGTCTT CACATATCGTGTTCTCTTTTGAAGTCATTTTGAATGACTTTCAATCATGG AAAATCACAGTCTTTTTAACAATAGTACATGCCACCATGATCATCGATAA TAGCTGACCGAGACCTCAGATGGATACAGCTTCTTCGCCCGATGGGCTCC ACGTGCCTGACATGGGCTCCACCTAGTTTCATCCTACGGCATGGACTGGT GTGGTGTTGGTCCTCTTCAGCGGAGTACCTCAAGAAACCTTCGTGGTTGT ACAGCTCGATCTGCTACTACACTGCTACATAAAATTTGTGCTGTGGGGCT CGTGGTTGTACCAAAATTTCAGTTGTTGGGGAGGCAGGTATAAGGCAAGC CCGCAGCGAGTCTCGGACATCTACAGTTTTACTATGCAATATACAGTAAA CAGTAAACTTGTGGCCGCCTCGCTGTTTATTTGTGTGGAGCAGGTGTAGT GCATTGGGGCGTAAACACCGTACCCCGGCATACCTCCCGTAGCCGTACTC CGGCGTACGCCCCCCCGCACTGTGGCGTACCCCCCTCAGACTGGACCGTA CCCCCCTGCTTCTAAGCACAAGTAAAGCAAGTGACTCCATACTACAGGTA CAGTATTTACTGCAGTAGTCGGTATCGTAATGGAGTTTGTTCGTGGACAA AGCTGGTTTTGGTGTACTACTGCATCCGGAAGGCGATCAACTGCATACAC TATGTAAAGTAGCTTTTTCGGGTTGGCAATCAATACGGTACGCTGAATAT GAGCAACTTTTTCAACCCCCCCCCCCCCATCCCCCACTGTCATAAACGTT TCTCCTCTGAACGATGCGATTTTTATTTTTTTGAAGCGTTTTATTTATTT GTTTCGTTGCTATCTTTTTCATGCCGTTACCTGGGGAAAACGTTACGGGC GGGATGTGGATATTTCAAAAATGGAGTTGAAATCCCCACATCCCCGCCCG TAAGGCCTTTCCAAGGAAACATCAAAATAATAAAAAGTTGCAATGTTCAG AGAAGAAGCGTTGTTTATTTGTTTTTCGCTGTATCTTCTTTTTTGCTGTA ACCTTGGGAACCTTGGGAAGATGTTACGGGCGAGGATTAACGAATTTCAA CTCCACGTGGAAGTTAAAAAGAGGAGAGGCGGTTTTGCCGTGTAGGAGGC AGAGGGGGCACGTCGCAGTCTGAGGGGGGTATGCCACAGTGCGGGGGCGG GGTATGCCGGAGTACGGGGGGTACGCCGGAGTACGGGGTGTACGCCCCAA TGCAGGGGGTACGCCCCAATGCACTACAGGCGGGGCATTATCACAAACGA GGTGTTGGAAAGTGACCCCAGGAGGCGCACTTTCCAACTTCGGAAATGGA CAGCAATGAATAACTTTGGAACATCCATTTCCAAAGTTGGAACGAGTTTC CGCGGGCTTTTTTTTGGAAAGTTTGGATTAAAAAGCCCTCGTTAAGACCA ACCCCAGCCAATCAGATTGCCTCTCAACATCACATGGCCACGGTGTACCA GTACTGGGTAGTTGGTGTACGAAAAGAGGGACGCATACTAATTAGTCCAC AGAGTTACCTGAATAGGCAGTACCCGTTACTCGAGCTACGTTGAGAACTG CTGGCCCTGTGCCGACGGACTCTCGACTGTGCATACCATGGGAATGCAAT GAATTGCGTGGCCTCGTAAAACCCGGGACTGGCCCGATGGCGGTCGGCGG TATGGAAGACATCGTCTCGGAAAGCGGTAGTAAGGAGACGAGCCTGTAAG TAAGCACTAGATTCCGCCTGGTTGTGGAGAAAGATCTGACTAACGCGGGA CAGGATGGCTGAACTCTGCTCGAGAGGCCAAATTCTCAGCCCCGAGCGGT GAGAGGGTGACCACAAGCAGAATTGGCACCCATACACGGTTGATGCCCAG TCTGCTGAATGGGATGACTACACACACGCACACACACGCATGAACACATT TTACTGTCCGCACCGGGTAGGTGTACATTTATCGGTTGGCACGCCCTGAA TCAACCGTGGCTCACCCATGTTCTGCGTGTTGGCCCCGAGGAGGCAACTC GCCGTAGAGTACCCATTGTCATCTCCAATAGAATGAACTCAAGATGATGT GCAATGGCTTCAAAATCGTCTTGAAATGATGTGAAAGGAAACTTGAAATG AAATGAATTCGCTCATTCGGTGTGCTTGTGTATGAGTCTGTGCGTAAATT TATTGAGTAGCAAGTAACTGCGCAATCCGGCCCTGTCTCCTAATAATAAT TGCTCCAAGCTACTTGTTTTGGTCCTCCCGATGGATTATCAATGTTGCCA CGAAAACCTCTCATAAACCTGTATTACAGTATTAAACTGCACATAACCGG GCATTCCAGGCCTTCTTATAATTCTAACCTACAATACATTTTATGTTCAC ATCTATTGAAATGCACCGAACTGTGGAACCCGGGCGTGTCAAGCTAATCA TTGTAAGCTGCTCCTGTTGGCCCTCCCCTGGGAATGGGAAATCAAGGATG TCTCCTGTTACGAAGTGTGTATTTATTAAATACATAACCACGTAATCCAT TGGTCCTCCCAGTGTGGAATAAATGATTGCTGGAACTGTATTACGAAAAC CTGTGGTGTAAGACCCAATTGAGGAGACACGCTTTATCTACCTCTCTTTG TAATCCCTCAACGTCATGTACCCCTCTCTCCGCTTTCTTGTGGTCATCTT GCTGGCCTTGGCCCCGGCATCTACAGTTGGCCCGCGAATTTCTTGCAATA GCCACCATTCACTGTTGCTTTAGGCTTCGCGTAGCATCAGAGCAATGCCA GTGAGAGGAAATGCGAGAAAATGATTAGTGATCCTAAAGTTCTACGAAGG TTTTTCAACCGACGGGGTTTGGCGTCGCACTTGCCGATATTTAGCATCGT TAAACTTTAGCTTCTGAGAAAAAGGCTGGATCTACAATTAAGACTCTATG TAAACCCATTTGCCTAGACACGACTCACGGTCAAATATAGGCGACAAACA ACCGCGCAGTACATTGGTAAAATAACTGTGACAGCTCTTCCAGGCCAACG AAAAAGTGTTTGCCTGATGATTGGGGAACCCCCTTCAAAAGACGAAGAAC CACACTTAATATAATAAGCCAGTTTCACAGGCGTATTATGCTGAAGTCCG ACATTAACGATGGGTCGGAGGAAGTCGATCGCCGAGCTGTCGGTTTTCTA CCGCTCTTACAAACAGTGAAAGATACAACGATTGCCGCATACAAAAGCTC ACACATGCCACCCATGAAGGACACTTTGAATGAACACTATTACTGTTACT AGCATATTTTATTACTTGATAATAGTATGGTGCTGACATATGGTATGGTT CTTGAAGGCTGGTACGGACATGTGCGAGTCATCTATGTGTGTATATATGG TCACATATATAGCAAGAGTAAGGATCAACCGGGTAAGGTTGCCAATCCTG CTCGTCGTCAGCTGAATCCTCGTTCGCGCCTGAGAATTTGATCTCGCGAG ACGGTTTTGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCTATGCTCAG GCTAAATCTGGTGCTTACCTACGGGAAATCCTTCCGCGGCGGCGTCCATT TATTTATTTAAACCGCCATACGCCATCGGGCCAGTCCCGAGTTTATCGGG TCACGCAATTGCGTAGCGATGGCGTTCACTGCCGAGAGTCCGCCGGCATA GGGCCAGTAAACCTCAAGGTAGTTCCAAACGGGTGCTACCTTGGCAGGTC CCCATGGACCAATTAATTTCCCAGACCCACTACTGGTATGAAGTGGGCAT GTTGAATGTACCGGCGTCGACCAATCCAATCGGGAAACTCGCCCACAAAA AAAATGTAATGACGCAACAAAGCGCACCGGTCCTGATTTCGTCGACACAT GAATACTGGTAGTAAGTGGCCTAATTAACTGCCTCCTGGCTGAAGCAACG TGGGAGAGCCCGGCTCATAAATCGCTGTTGGGCGCCCCTACGAATCGCGG TCTTCGAAAATTGATTCCTCTCACACAAGCGCAAGAAACCATTTCGCCAA GTCCCAGCTCCTTTCTCCCGGCAGCTTGCGATTGCGCCCGAAAGCCCCCA TCGACTAAGACATATTCGATGTCGCACATCGCTTATGGATTTCTCACATA TCGTCAGTTGCATTCAGGAACAGCTACCTGATGTCCCCGAGGTCCAGGCC AGCGTTCACGCCACGACAAACCGTCAGTATAAACGTTTCTGAAAAACTTG ACCGCTCAGACGCATAAAGCGACTGCCCGCCCCAAACAACTCCACCCGTC GAAATCTTGGGATAAAGGACAACGTCGCTCGCGGTCCAAGGTCGACCAGA CCAAGGAACAGTATGAGGCCCGCTTGTTTCATAGACACGGGCGCCCTTCG AGGGGACCCAGGTCGACTTAACTCCGCCCGACGTGGTGCAGGAGTCTGCT AGAATTGAGACGAGTACGGTAGTTAGAGTGATAGGTCTCGACCCATTTTA TCGAAAGCGCCACTCGCTCCGAAGTGCTGATATGTTGCTATCACAAGCAA GAGTAGCAAGCATAGGTCGCGATTAGTGTGCGCTCAAATTTATGAAAATT GATATCAACCGTTACTGACCAGCGTGTTGACTCAATACCCTGTTAAAAGT CTATTGACCCAGCCGCCCTTGACGTTGCCCGATGTAAATAGAAAATCACA TGTGTACCAAAGTGCCAAACTCCAAGACGATGTAAGTCTACACCACCACC TCACGGTGGATATTATATCAGATGTCTCGTGTATCGCTTAGGATTTCGTC CGAAATTATTCCTTACTGTGATGCGCAACCACTAGACCCCTTCCCCGCAG CGCAATCAATAATCGGCAGCACTTACGAATCACCCCGTAAGATCAAGGGG TGTAAACGCTTCGCGTCAACACTAGGCTACCAAATATTGTCTATTGAGCA TTTGTACGCCCCAATCCAGGCCCTGACAGAATGATGATAACATTATGTAT GTATGTATGTATGTATGTATGGTCATCACATATAGCAAGAGTAAGGATCA ACCGGGTAAGGTTGCCAATCCTGCTCGTCGTCAGCTGAACAGGGGAAATG AATATTTCCCTGTCCCCGTTTGCGCCTGAGAATTTGGTCTCGCGAGACGG GTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTATATACTCAGGCTG AATCTAGTGCTTACTTACAGGGTTACTCCCGAGTTCCACGGCGGCGTCAA TCCATTTATTTAAACCGCCGTACGCCATCGGGTCAGTCCCGAGTTGATCG GGTCACCCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGCCGGCA CAGGGCCAGTGAACCTCAAGGTAGTTCCAAACGGATGCTGCCTTAGCAGG TCACTATGGACCAATTAATATGCGTCTATCTTTCCTACACCCACTATTGG TATGAAGTGGACATGTTGGAAGTACCGGCGATGTAAGCATTTGGTGTCAT TCTTGGTTGGAAAGTGGGAAAATATCACTTGCTGGTAGCGACGCAGCTAT TTCCTCTTTCCACAGCATATTCGGTACAACTTAATTGATCCCATTTATTC TGGGCGCACACAGGAGGAAGGTCACACAGAATGTCTCCACCTTCCTTCTG CGATACTTGCCTTAATTTTTAAGGCGAGAAGGATTCAGCCGTCCCTTTCC CTCGTCGACCGTGAAGTTGAATTTAGTGTTACCCACGAAATAATCGTTCT CCACTTGTTGGGTATGATGTGAGGCAAAAACCCAGTTCGTGTGACTGCGC CGAGATTCGAACTCACGTCTCAACGTCAGAAGGTTTCGAAGTTACCAGAT GAACCGCCGGGACGACCGAGGCAGCTCAGCGGTCTGTTTTTTACATCGGA ATTAGATGCCACAAGGGTATAAGTATACGTTCCTCAAAATGTCGTCATTT TCGCCGGCCACGAGGCATCCGTCTCCTTTTTTTAAAAGGGTGCTTCACAT CAAGACATACCAGCTGCTATGTAACCCTATATCGCGATGGAAAATAAAAA GGAAATCGTCAGGCACCCACAATTTCTGGCATAAAATAAAAAGTCGCGCT TGCTATTTTATATGGCAAACTAAAAAACTAAAACTAAAGCTACAAAATTG TGGAAATTCCGTTGCCAAAAAAAACGTGGGGCAAAGTTGGAGTTGGCCCT TTGTAGGATGGAGACAAAAAGAGAGAAAAAAAAGCGGGGAGTGTATCGGG TACACCCCGGCGTTTTCGGCCGCCCATCACGCCGCATATATGCATATGAT GGGCAACAAAGGGAGGTACATGTATGGTTATCACATATACAGTAGCAGAG TATGGATCAACCGGGTGAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACA GGGAAAATGAATATTTCCCTTTCCTCATTTGCGCCTGAGAATTTGGTCTC GCGAGACAGGTTCGTCCGTCCCGTCCCGCTTCAGCCTCCAGACTAAGGCT GAATCTGGTAGAATTCACCAAGGCTCCACGTTTTGATACATGATATGTAC AGTGTATGTGTGTATGTGTGGAAATGTAGTTCGGAACAACTGCAGCACTG CATGCATGACAACAGCGGTACAAAGAGCAGCAGGCGGCAGCGGTATGTAC CAGTGGCCTGCATCGCACGAGAGGAAATGCTCATACCAGGTACACGATGT TACATCTGATATCATACTGCTATATGATTCGTATGATACGAGAGATATGT TCTAAAGTAGTATCGTACATTTTATCAATGGTACCATATCATACTGCACA TAGCGTACGCAGAGCAGCGCCGCTTCGTTGGCGAGCTTCGTTGGCGAGCT TCGTTGGCGAGCATCTTACCGAATACTGATTCCTTACAGTTCAGACGCTC GTACATAGCTCGTCTCTGCTTGCTCTCCGGTGGTTTCTCGGCGCCGCCCA CCCAACCGCTGCCGCTGCCGGCGCTGAGCTTGTCCGGGCTCATCACCTCC TCAGCAGCTGCCAGCAAGGTGCCACAGCCCTGCAAAACTGCTGCTCCGGC GGCAATCGCACAACTGCGGCTCCGGTGGCTATCGCACCCGTGAGCTCTCC TTCATCGATCTCCACATCCATACCCACACCGCGCCACGAGGCCGCCACGG GGATAACCGATTACAGTACTACTGATTTGACCCCCAGCTCCTTGATTGCT GCAGTTTCGTTCAAGCTTGGGGTGGCGTTCTCCCTTTTTGTGGACGTTTA CATCGCTCGTTCCGCCTAGCCGAATTTCTTTAGGTGGAGCGAGTAAAATA GCCTCCCACAAAAAAATGCAATTTCTGTAGGCTGGATTTCCGGTTTTTGG GGCCCATAGCGCGGCATTTACGAAGATTTAGCCACGGAAAATTGTTTTTG TTTTTGTTTTTTACAGCCGTTTTTGTTTCTTACCCTGGTATAAAGAATGG CAATTACCATCTGTCACTGTTAAATACTTTTAGGCGGCGCACACCAAATT TGTAATGTGGGCAAAGATGACCGTGTGCAAGGCAACTTAGTGCTATTTAT CGCACTTAGCTGTGTTTGTTTTTTCTCGGCATGGCCCATGTTGGCCCAGC GGCCTACCCTACTGATGAATAGGGATACATCACCCGCATAAACCTTATCA TCGCGTTTGAACCAGCGCGTCACAGCTTAGCCGAGCGTAAAATCAAACAT CGAGCGCAGAAAACAACAGTCACCTTTCCTGAATTGATGGTACTAAGCCC CGGACAACAAGTGATGATATTGAAAACAACCAAAGCTCAGACGAAACCTC TCCCAATTTTTTCCAACGGCGGCACGTACGTTTTCTGCGCGAAACTATCG CGAATCTTATTCCGCGTAAAACTCCAGCTCGAGAGGGGAAAAGAGGGTCT GTCCATCTGTGCTTTACCTGAAAGCTTACTGCCCATTCCACGTTGACAGT AAAATAACATCTACTGTATGGCCTTCGCTGAAAAGGATATGTTCCAGAGC CATTCTCGAGAGTCGGGCATACGGAATCCCACGGTGTCGCGAAATCATCG CAGCCTATCGGGCAAAGCCTCGTTTTGATGAAGTCGTGCAACTTCTCAAT AGGTGTACCCAGTAGGTCCTTGCGACAACGGTGAGATAAACCTGCAATGC CGTCTGTTTCGATCTTTACCCATATGCCACCATATCGGAACTGTGTGCGT GACACCAAGAAGATGGCGTGGCAGTGACTGTTAGTGGGGAAGGCGTGATT GGTCCCTTTTGCGTACGTGATCTAGCACATCCCGGGTAAGGAGAATGCAA TCCCGATGGAGATCGCTGGAGGACGGGGATCGCCCGCAGGTACGAATGAA AGCGATCGCGATGGTGGCGCCGGCTCTAGGCGCTTTCTTCAGGCCTTCCT TACGTAGAGCCGGGAATTGGCAGGACTCGGTCGCACACGGAGTAGAAGGG GTTTTATACACTGCTTGAGAGGTGGAGCGCGGCAAGGATAGTAGATACCG CGTCGAATTTGTGAGGTGCGCCAATGCTCTATTTATGAGTTCCCTGGCGA GCAAATGCTCGAAGCGCGGCAGCTGGTGTGCGCGCACATGTAAGACACAA CGTCGTGGCGTGAGGGCGACGAACCACCTGCACGTGGGTGCTATATCTCG GATGATATGGAGGCAGCTATTGCAAAAGTTCCCCCGCAGTGTTTACATGG GTTTGATCATTGGCCGATTACGTCATGCATCCTTCGGGTGACCTGGTGCA TGACACTTAAGTGTTCGACGTGACGTTCTGCACTTTGACTTATCAGCCAG AGAAAGAGCGGTGGTGCTGAAGTGAATGGCATGGAGGACGGGCACCTGCT GGTGCTGATGAGGGACGCCAGCTGGTTCGCGTGGCTGGATGAGGCTGGGT ATCGTCCGAGTGAGGTCACCGCGGGCGCCAATATGAATTTCTACTTGTCT TTCGGCATGCTCAGAGTGTTTTTGGACGAGAGTGAAGTTCACCTCAGCGA AGATTATGCGGATATATCGGATCGGTTGGAGTAATCCATCACTTCGGTGT GGCAGATTCTTTGGACGGGTGGGACCGTGGAGCGCATGAATCGGGAGGTG GCGTTTTTTGTATCGTGCTCTCAGCGAACGACTCCTCTCGGTAAGCGAGG AAACGTTCGGACAACGGTGAATATGAAGAGAAAACCACGGCACCATATTG TGCAAGAGAATGCGGGGATTTTACTGTTTGTTCTTGCCGCGGCCCTAATA CCGTGAAGAACTCTAGCTGTTAGCGATTCAATGGCGACCTGCGGATATAT AGGGGTACCCTATGTCCGATTGATTGTTGCGTAACTAGAGGCAGCGACGA GCGGGGGGCAGGTGACATCACGAAGATAGGTTCTATCGGTACAACAACGC TACCGGCAAAGGCAGCCAATGGCTTTGGGAGCAGAAGTTTTGCGCGTTCG CGTCACTCATGCGTAAGGATGTGGGCACAAACAGGGCGTAGGGCGTATCA ACACCACCCGAGGGTGGCCCGAACGTAGAAAGGGTCCCGATGGAGCAAAG GTTTTCAGTCTAGGGTGCCAATGCCTCTTAACAACACTGTCCATCAATGC TGTGGCCACTCAGGGATTCACCTGTACCTCCTCAATACGAACCTTGAATT CCTTGAGCGAATATGGGTTCAGCCTGCTCCACACCACGTTAACACACATG CGTACTTTCCCTAGATAGTCGTGGTTCACCCATTGCGCTCCGGCAGTAGC TACTATTGATAGAGCGACGAGCAACACCCTGTTTATGATCTTTGAGCAGC TCCTTAAGGTGCAAGGAACGTGCTTCACCCCATGAAGGCTTGTCCGAAAC CTTAAACTCAAGCATTGTCGTGTCTGTGAGGACTATGTGTACGCCCAGGT CCCCGAGAGCACCAGCCGTTATATGCGAACTGGCATTTGTGTTTGCAAAG CAAAATGAAACAGCACCACCGTATTTTGTACACATTCTCGTTCGCCTTGA GGATAGGTCCCGTTCTTGTTGAAGATACGCGCTGCTGTTGTCTTCACGCA ACTATGAAGTACACGTCGGATCGAGCGGGTATTACCCTTCCTTGTGACTG ATAGTTCCTCGAGAGTGTTTTCTACCATTAAATCCTCGTACTATGTTTGG TTATATCTAGAGAGTTCCAGGTCAGTTATCTGCTCTGTAAGTATCATGGC GACTGCAGCTTGTCCGAATTCCTTGTTTATTGCGAATTTCTACCCGGGAA ACCACGTCGTACCAGTAAAGCCCTCGAGCCGTACGTTAGGGCCGCTTGAC ACGAATACCACCAACCTTCCCCTGTCACCTCTTCCCTTGTCCCACTACTG CAGGGATAAGTGACGTCACGAGATGGAGGAGGCGAGAGGTGAACGAGATG GACATATCTCGAAAAAGGCATTGCCCCAGAGAAAGCATCCCAGGTGCACC TTTGAAATGTGCCCCAAGGCATCGTCGTTCGGCGTGCCCGGCAGCCGGAA GCGCGAGTTCTGCGGTGAACATGCTCCAGCGGGAATGGTAAACCTCTCCG CGACGAAGTGCGTCCATCCGAGGTGCTCGAAGATGCCGTCTTATGGCGTG TCTGGCACTAAACGGAAAGAATACTGCTCCGAGCACGCCGTGGAGGGGAT GGTGAACTTGAGGTCGAAAATGTGCGGTCACCCGGGATGCATGAAGCAAC CATCCATGGGAATCGCAGGCAGCAAGATGCGGGAGTTCTGCGTAGCGCAT GCTTGCGAGGGGATGGTTTGTCTCATATCGAGGAAATGCAAGCATTCTGG ATGCGACAAGAAGGCTAAGCTTGGCGTGGCTGGCACCAGTAAGCCTGACT ATTGCGCCGAACATGCCCCTGAGGGGATGGTGGGAGTCAGAGCCAGGGCG AAGTGCCGCCTCCAAGGATGTCACAAAAGACCGTCGTTTGGTGTGGCCCG GACTGGAAAGCCCTTGTATTGCTCCCAGCACTCTGAGGCAGGGATGGTCA ACTGTATAATGATTTTCTGCAAGTACGATGAGTGCTACACACAAGCTTCG TTCGGCCTTGCAGGCAGCAAAAAAGGAGAGTTCTGCTCTAAACACGCTCC GGGGGGGATGGTCAACGTCAAGTATAAAAAGTGCAGTCACAGGGGATGCT CCAAACATCCGTCTTATGGTGATGCTCAAAGCGGAAAGTTAGAGTGCTGC GCAGAACATGCCAGTGAGGGTATGGTCGACGTAAGACGCAAAAAAAGGTG CAGCCACCGGGGATGCCAAAAACTCCCGTCTTTTGGCGAGTACGGAAATG AAAAAATGGAGTTCTGCGCCAAGCATGCCACTAAGGGTATGGTAAACTTG ACACAGAAGTGTTCCTATCAACAATGCATGGCGCGCCCGTTGGCGGGCGC GGTCTTTGGCGGTAGTAGTATGGGTTACTGCGTGGAACATGCCTTCAACG GCTTGACCTCGATGAGTTCCAAAACGACCCTTCCCAGAAAGCGAAAGGAG GATGCCGCTGGGGCGCGTGCAGTCGGCGCGCCTCCTAACGATAACGGGAC AGAAAAACGGAAGAGATCCCGTGCACCAACTATTCTGGCAATATCCAGTG AAGGGGGGGCCAGTACTTGAAGATACTGGACAGAAAGCCCGCAGGAGAAG GGGCGTGTCAAAAGCCAGCGTCTAAAGTGACGAGTGACTCCTTTTGACCG AAAAAGATGCTATCACACCGCCTGTTGCTGAGGCCAGGGTTTAGGCGCAA ATAGGTCCGCTTTCTGCCGCTGTTGGGGTGTCTGATTCGCGCTCGACGTC GTGTATACAGTTGGTAGGGTCATAGTAGGGTAAGCTTCGAATCTATTGGC TTACTCCCACACAACGTTCATATGTGGCAGCCGGTTTTCAGTGGATCTCC CAAGCAGCGTGTCTTATGTATTCCACGATGACTTTCGATGCGTTATTCTG ATATGTAAAGTACATGCATGCGCAGATGCGAGAAAATTAATCTTCGTAGT AATTAAGGCCTAAAAGGAGTTACATTTTATGAACGAGCGAGCCACGGTGC TGAAGATCGTCGTGAAATACTAGGCATTGCTTTCTATTCTAGCTGTAAAT GGGGTAGGCAAACACAAGTGGAGAGGCTGTAAAATGTTTCTCTTCTTGAT TCTACTGTTGGCATAGGTCGGCGTGTGACTATCGAGAAAATATAGAACTA CGGCAAGGCTACAGGAATTCAAGCACCGTTCGCGCGTCACGTAACGAGAG TAAGACGCTCGAGACGGCGCCACGCACAGTCGTCCATAGCGACTGTAGTG ACAACTCTTGTTGTACAGCTACCAATGCCTATACGCCGTTGGCGAAATAT AAGCAAACCTTTTTTGTAGATAGCTCTGAAGCTCTGCGACCCCGAACCGT CGATTGCCCCAAATAAGCATTAGATCTACCCCATTACCCAGGAGGCTAAC GACCGCGTGCACCTGGGTCGCTACCACGTCAGCGTCGCACTCGGGGACAA CGAGCAATCTGGTCTTCGTCTCACGTCGGCGGCCTGTTTTCCCTCCCTTC GATCGCCCCTGTTGGTTCTGGCCGTCAATTTTAGACATCGGTACTTGGAA GTAGACGATTTATATCGGTTCGACTTTGGAGTACGAGCGCGAGCGTGATC ATGACATGGGCTGTTGAAAGAGAAAAATGTTCCACAAAGTGACATGGTAA TGCGATACAGCGTGGTGCGTGTCTATGTGCTGAAAGTGCACGCGAGTAAC
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig1075:69294..87293+

>mRNA_A-nodosum_M_contig1075.4.1 ID=mRNA_A-nodosum_M_contig1075.4.1|Name=mRNA_A-nodosum_M_contig1075.4.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1248bp|location=Sequence derived from alignment at A-nodosum_M_contig1075:69294..87293+ (Ascophyllum nodosum dioecious)
ATGGAGGAGGCGAGAGGTGAACGAGATGGACATATCTCGAAAAAGGCATT
GCCCCAGAGAAAGCATCCCAGGTGCACCTTTGAAATGTGCCCCAAGGCAT
CGTCGTTCGGCGTGCCCGGCAGCCGGAAGCGCGAGTTCTGCGGTGAACAT
GCTCCAGCGGGAATGGTAAACCTCTCCGCGACGAAGTGCGTCCATCCGAG
GTGCTCGAAGATGCCGTCTTATGGCGTGTCTGGCACTAAACGGAAAGAAT
ACTGCTCCGAGCACGCCGTGGAGGGGATGGTGAACTTGAGGTCGAAAATG
TGCGGTCACCCGGGATGCATGAAGCAACCATCCATGGGAATCGCAGGCAG
CAAGATGCGGGAGTTCTGCGTAGCGCATGCTTGCGAGGGGATGGTTTGTC
TCATATCGAGGAAATGCAAGCATTCTGGATGCGACAAGAAGGCTAAGCTT
GGCGTGGCTGGCACCAGTAAGCCTGACTATTGCGCCGAACATGCCCCTGA
GGGGATGGTGGGAGTCAGAGCCAGGGCGAAGTGCCGCCTCCAAGGATGTC
ACAAAAGACCGTCGTTTGGTGTGGCCCGGACTGGAAAGCCCTTGTATTGC
TCCCAGCACTCTGAGGCAGGGATGGTCAACTGTATAATGATTTTCTGCAA
GTACGATGAGTGCTACACACAAGCTTCGTTCGGCCTTGCAGGCAGCAAAA
AAGGAGAGTTCTGCTCTAAACACGCTCCGGGGGGGATGGTCAACGTCAAG
TATAAAAAGTGCAGTCACAGGGGATGCTCCAAACATCCGTCTTATGGTGA
TGCTCAAAGCGGAAAGTTAGAGTGCTGCGCAGAACATGCCAGTGAGGGTA
TGGTCGACGTAAGACGCAAAAAAAGGTGCAGCCACCGGGGATGCCAAAAA
CTCCCGTCTTTTGGCGAGTACGGAAATGAAAAAATGGAGTTCTGCGCCAA
GCATGCCACTAAGGGTATGGTAAACTTGACACAGAAGTGTTCCTATCAAC
AATGCATGGCGCGCCCGTTGGCGGGCGCGGTCTTTGGCGGTAGTAGTATG
GGTTACTGCGTGGAACATGCCTTCAACGGCTTGACCTCGATGAGTTCCAA
AACGACCCTTCCCAGAAAGCGAAAGGAGGATGCCGCTGGGGCGCGTGCAG
TCGGCGCGCCTCCTAACGATAACGGGACAGAAAAACGGAAGAGATCCCGT
GCACCAACTATTCTGGCAATATCCAGTGAAGGGGGGGCCAGTACTTGA
back to top