mRNA_A-nodosum_M_contig1075.12.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1075.12.1
Unique NamemRNA_A-nodosum_M_contig1075.12.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: 1433_FUCVE (14-3-3-like protein n=3 Tax=Phaeophyceae TaxID=2870 RepID=1433_FUCVE)

HSP 1 Score: 458 bits (1179), Expect = 2.030e-162
Identity = 241/251 (96.02%), Postives = 243/251 (96.81%), Query Frame = 1
Query:    1 MTSRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLI-MQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 750
            M SRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLI DYKSKIETELTDIC DILKIIE+ELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQ AS+ ANQDLPPTHPIRLGLALNFSVFYYEILNSP RAC LAKAAFDDAIAELDTLSEESYKDSTLI MQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL
Sbjct:    1 MASRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICADILKIIEAELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQLASDHANQDLPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKAAFDDAIAELDTLSEESYKDSTLIIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 251          
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: W7TWA9_9STRA (14-3-3-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWA9_9STRA)

HSP 1 Score: 377 bits (968), Expect = 2.720e-130
Identity = 200/251 (79.68%), Postives = 219/251 (87.25%), Query Frame = 1
Query:    1 MTSRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEA-PGNADGTVVEDL 750
            M SRD LVY AKLAEQAERFDEMVDHMKAVAQQP+ELSVEERNLLSVAYKNVIGSRRASWRVISSIE K    ++LPLI +YK+KIE EL +IC+DIL IIE+ELIPNSTSEEGKVFY+KMKGDYHRYLAEFQ  ++R+ S+  AL AY+ A+++A  DLPPTHPIRLGLALNFSVF+YEI NSP RAC LAK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQ EA+EA   N DG  VEDL
Sbjct:    1 MDSRDSLVYKAKLAEQAERFDEMVDHMKAVAQQPQELSVEERNLLSVAYKNVIGSRRASWRVISSIEQKGE-QERLPLIREYKAKIEDELLEICNDILNIIETELIPNSTSEEGKVFYFKMKGDYHRYLAEFQVGEKRRESSDAALSAYKCATDIAEHDLPPTHPIRLGLALNFSVFFYEIYNSPDRACALAKKAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQNEADEAGANNEDGNRVEDL 250          
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: A0A835YSI6_9STRA (14-3-3-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI6_9STRA)

HSP 1 Score: 373 bits (958), Expect = 8.760e-129
Identity = 196/247 (79.35%), Postives = 217/247 (87.85%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 750
            R  LVY AKLAEQAERFDEMV  MK V+ QP+ELSVEERNLLSVAYKNVIG+RRASWRVISSIE K    ++LPLI DYK KIETEL +IC +IL IIE+ELIPNS++ EGKVFYYKMKGDYHRYL+EFQ+ D RK S+  AL+AYQ A+E ++QDLPPTHPIRLGLALNFSVFYYEILNSP+RACNLAK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGE +EA  +ADGT VED+
Sbjct:    3 RSALVYQAKLAEQAERFDEMVSFMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGE-PEKLPLIRDYKKKIETELEEICTEILGIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSDKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDEAGADADGTRVEDM 248          
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: A0A7S3IA22_9CILI (Hypothetical protein n=1 Tax=Fabrea salina TaxID=342563 RepID=A0A7S3IA22_9CILI)

HSP 1 Score: 372 bits (954), Expect = 4.550e-128
Identity = 193/234 (82.48%), Postives = 211/234 (90.17%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEE 711
            RD LVYMAKL+EQAERFDEMV+HMKAVAQQP+ELSVEERNLLSVAYKNVIGSRRASWRV+SSIE K   +D+L LI DYK+KIE EL DIC DILKII  ELIP STSEEGKVFYYKM+GDYHRYLAEFQS ++RKTS+S AL AY+SAS +AN DLPPTHPIRLGLALNFSVF+YEI+NSP RAC LAK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS+Q + +E
Sbjct:   21 RDSLVYMAKLSEQAERFDEMVEHMKAVAQQPQELSVEERNLLSVAYKNVIGSRRASWRVLSSIESKGE-ADKLQLIQDYKNKIERELVDICADILKIITDELIPRSTSEEGKVFYYKMQGDYHRYLAEFQSGEDRKTSSSSALSAYESASGIANSDLPPTHPIRLGLALNFSVFFYEIMNSPDRACQLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEQEQTDE 253          
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: A0A8J2SJV0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJV0_9STRA)

HSP 1 Score: 369 bits (946), Expect = 6.310e-127
Identity = 194/248 (78.23%), Postives = 216/248 (87.10%), Query Frame = 1
Query:    7 SRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 750
            +R++LVY+AKLAEQAERFDEMVDHMK+VA   +ELSVEERNLLSVAYKNVIGSRRASWRVISSIE K   S++  LI +YK KIETEL  IC+DIL IIE  LIPNS  +EGKVFYYKMKGDYHRYLAEFQSAD+RK S+S AL++YQ AS++AN+DLPPTHPIRLGLALNFSVFYYEILNSP RAC++AK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD  +      NADGT V+DL
Sbjct:    6 TRENLVYLAKLAEQAERFDEMVDHMKSVANYSEELSVEERNLLSVAYKNVIGSRRASWRVISSIEQKSD-SEKTALITNYKKKIETELETICEDILGIIEKTLIPNSAGDEGKVFYYKMKGDYHRYLAEFQSADKRKESSSSALESYQQASQIANKDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDNADNNH-DNNADGTAVQDL 251          
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: B8BX06_THAPS (14-3-3-like protein n=3 Tax=Thalassiosirales TaxID=33847 RepID=B8BX06_THAPS)

HSP 1 Score: 360 bits (925), Expect = 8.610e-124
Identity = 189/235 (80.43%), Postives = 206/235 (87.66%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEA 714
            RD LVY AKLAEQAERFDEMV  MK VA+QP+EL+VEERNLLSVAYKNVIGSRRASWRV++SIE K   +D++ +I DYK+KIE EL DIC+DIL IIE  LIPNSTSEE KVFYYKMKGDYHRYL+EFQ  D RK SAS ALDAYQSA+E+A+ DLPPTHPIRLGLALNFSVFYYEILNSP RAC++AK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQ    EA
Sbjct:    3 RDSLVYKAKLAEQAERFDEMVSDMKEVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGD-ADKMSIIKDYKAKIENELCDICNDILSIIEESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQQGDVRKASASAALDAYQSATEVASSDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQAADAEA 236          
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: F0YC30_AURAN (14_3_3 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC30_AURAN)

HSP 1 Score: 358 bits (919), Expect = 7.830e-123
Identity = 190/247 (76.92%), Postives = 208/247 (84.21%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 750
            RDDLVY+AKLAEQAERFDEMV+HMK VA   +ELSVEERNLLSVAYKNVIGSRRASWRVISSIE K   S++  +I  YK KIETEL  IC DILKII ++LIPNS  +EGKVFYYKMKGDYHRYLAEFQ+++ R  S+SDALDAYQ AS +AN+DLPPTHPIRLGLALNFSVFYYEILNSP RAC++AK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD     EA     G  V D+
Sbjct:    5 RDDLVYLAKLAEQAERFDEMVEHMKTVAGYSEELSVEERNLLSVAYKNVIGSRRASWRVISSIEAKSD-SEKTAMITSYKKKIETELETICADILKIIATQLIPNSVGDEGKVFYYKMKGDYHRYLAEFQASEVRNKSSSDALDAYQEASRIANKDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDNAVDVEASNAEGGGQVGDV 250          
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: A0A7S1H1R2_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1R2_9STRA)

HSP 1 Score: 358 bits (918), Expect = 1.690e-122
Identity = 188/240 (78.33%), Postives = 208/240 (86.67%), Query Frame = 1
Query:    1 MTSRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQG-EAEEAP 717
            M  RD LVY AKLAEQAERFDEMV  MK VA+QP+EL+VEERNLLSVAYKNVIG+RRASWRV++SIE K    D+LP I DYK+KIE EL DIC+DIL IIE  LI NSTSEE KVFYYKMKGDYHRYL+EFQ+ D RK SA+ ALDAYQ+AS +A+ DLPPTHPIRLGLALNFSVFYYEILNSP +ACN+AK AFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTSDQ  +A +AP
Sbjct:   17 MADRDTLVYKAKLAEQAERFDEMVTDMKEVARQPQELTVEERNLLSVAYKNVIGARRASWRVVTSIEQKGE-PDKLPTIKDYKAKIENELVDICNDILSIIEESLIRNSTSEEAKVFYYKMKGDYHRYLSEFQAGDSRKESATSALDAYQAASRIASSDLPPTHPIRLGLALNFSVFYYEILNSPDKACNIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAADAGDAP 255          
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: A0A1Z5JP80_FISSO (14-3-3 protein epsilon n=4 Tax=Bacillariophycidae TaxID=33850 RepID=A0A1Z5JP80_FISSO)

HSP 1 Score: 355 bits (911), Expect = 1.050e-121
Identity = 185/235 (78.72%), Postives = 206/235 (87.66%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEA 714
            R+ LVY AKLAEQAERFDEMV  MK VA+QP+EL+VEERNLLSVAYKNVIGSRRASWRV++SIE K    D++ +I DYK+KIETEL +IC+DIL IIE  LIPNSTSEE KVFYYKMKGDYHRYL+EFQ  D RK SAS ALDAYQ+AS +A+ DLPPTHPIRLGLALNFSVFYYEILNSP +AC +AK AFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTSDQ E ++A
Sbjct:    3 REALVYKAKLAEQAERFDEMVSDMKDVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGD-PDKMTIIKDYKAKIETELVEICNDILSIIEDSLIPNSTSEEAKVFYYKMKGDYHRYLSEFQVGDTRKESASAALDAYQAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDKACQIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAEGDDA 236          
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Match: A0A1E7FAR9_9STRA (14-3-3 protein n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FAR9_9STRA)

HSP 1 Score: 355 bits (911), Expect = 1.050e-121
Identity = 185/235 (78.72%), Postives = 206/235 (87.66%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEA 714
            RD LVY AKLAEQAERFDEMV  MK VA+QP+EL+VEERNLLSVAYKNVIGSRRASWRV++SIE K   SD++ +I DYKSKIE EL +IC+DIL IIE  LIPNSTSEE KVFYYKMKGDYHRYL+EFQ+ D RK SA  ALDAYQ+AS +A  DLPPTHPIRLGLALNFSVFYYEILN+P +AC++AK AFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTSDQ +A+ A
Sbjct:    3 RDSLVYKAKLAEQAERFDEMVQDMKEVAKQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGD-SDKMEIIKDYKSKIECELVEICNDILGIIEESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQTGDTRKESAGAALDAYQAASGIAQSDLPPTHPIRLGLALNFSVFYYEILNAPDKACSIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQADADGA 236          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1075.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
1433_FUCVE2.030e-16296.0214-3-3-like protein n=3 Tax=Phaeophyceae TaxID=287... [more]
W7TWA9_9STRA2.720e-13079.6814-3-3-like protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A835YSI6_9STRA8.760e-12979.3514-3-3-like protein n=2 Tax=Tribonema minus TaxID=... [more]
A0A7S3IA22_9CILI4.550e-12882.48Hypothetical protein n=1 Tax=Fabrea salina TaxID=3... [more]
A0A8J2SJV0_9STRA6.310e-12778.23Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B8BX06_THAPS8.610e-12480.4314-3-3-like protein n=3 Tax=Thalassiosirales TaxID... [more]
F0YC30_AURAN7.830e-12376.9214_3_3 domain-containing protein n=1 Tax=Aureococc... [more]
A0A7S1H1R2_9STRA1.690e-12278.33Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
A0A1Z5JP80_FISSO1.050e-12178.7214-3-3 protein epsilon n=4 Tax=Bacillariophycidae ... [more]
A0A1E7FAR9_9STRA1.050e-12178.7214-3-3 protein n=3 Tax=Bacillariaceae TaxID=33852 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1075contigA-nodosum_M_contig1075:252768..256120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FN58
PFAMs14-3-3
Model size753
Max annot lvl2759|Eukaryota
KEGG koko:K06630
KEGG Pathwayko04011,ko04110,ko04114,ko04151,ko04390,ko04391,ko04722,ko05169,ko05203,map04011,map04110,map04114,map04151,map04390,map04391,map04722,map05169,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0031410,GO:0031982,GO:0042470,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0048770,GO:0097708
Exons5
Evalue8.58e-168
EggNOG OGsCOG5040@1|root,KOG0841@2759|Eukaryota
Descriptionprotein domain specific binding
Cds size753
COG categoryT
BRITEko00000,ko00001,ko03400,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866462.751751-CDS-A-nodosum_M_contig1075:252767..2528231680866462.751751-CDS-A-nodosum_M_contig1075:252767..252823Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1075 252768..252823 +
1680866462.7659526-CDS-A-nodosum_M_contig1075:253330..2534901680866462.7659526-CDS-A-nodosum_M_contig1075:253330..253490Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1075 253331..253490 +
1680866462.7750497-CDS-A-nodosum_M_contig1075:254130..2542941680866462.7750497-CDS-A-nodosum_M_contig1075:254130..254294Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1075 254131..254294 +
1680866462.7856853-CDS-A-nodosum_M_contig1075:255529..2557311680866462.7856853-CDS-A-nodosum_M_contig1075:255529..255731Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1075 255530..255731 +
1680866462.7945693-CDS-A-nodosum_M_contig1075:255949..2561201680866462.7945693-CDS-A-nodosum_M_contig1075:255949..256120Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1075 255950..256120 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1075.12.1prot_A-nodosum_M_contig1075.12.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1075 252768..256120 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1075.12.1

>prot_A-nodosum_M_contig1075.12.1 ID=prot_A-nodosum_M_contig1075.12.1|Name=mRNA_A-nodosum_M_contig1075.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=251bp
MTSRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYK
NVIGSRRASWRVISSIEGKDTVSDQLPLIHDYKSKIETELTDICDDILKI
IESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQ
SASELANQDLPPTHPIRLGLALNFSVFYYEILNSPQRACNLAKAAFDDAI
AELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL
*
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mRNA from alignment at A-nodosum_M_contig1075:252768..256120+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1075.12.1 ID=mRNA_A-nodosum_M_contig1075.12.1|Name=mRNA_A-nodosum_M_contig1075.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3353bp|location=Sequence derived from alignment at A-nodosum_M_contig1075:252768..256120+ (Ascophyllum nodosum dioecious)
ATGACCTCTCGCGACGATCTCGTTTACATGGCCAAGCTCGCTGAGCAGGC CGAGCGGTGAGACATGTCCTTCAGCTACTTCAGAGTAGTCCATGCATTCA TTTCCCTTCGCGTACCGTAGTGTCCACCGAATCGTCTAAGTTCAGATTAG CGTGACTTGATTCTAAATGCGAGTGATACCACCTTCCTCTGGACCCTCCC TCACCCTAAGGTTTTTTACGAATTCCACTTCTCCAAGGTTTGAGCGGATG GAATGTAGTAGCCCCCGCAGCTCGCTCCTTGATTCAAGGTTCATCCACTG TAGACATGCCACGCGAAATTGACGTGACGAAAACGGGCGGCGTGATAACT TGTTCGTGTTTGCCCTTTTTGCGCTGTTTCGGGGAATTTGTATGGTGTCA TAAAAATGGACTTACGAATAGGGCGCCGAGCATTCTCACCTGTCTGTATC CTTCCTTTTAACCAGTCGACACGCACGTTATGAGAGGCGTATCCATGTGT GTCCATTCCCCCTCTTACTTGATCGGCGTCTATGCTCCTCCTTACGCGTT TTCTACGTGACAGCTTTGATGAAATGGTGGACCACATGAAGGCTGTTGCT CAGCAGCCGAAGGAGCTCTCGGTTGAGGAGCGTAACCTCCTTTCTGTAGC GTACAAGAACGTCATTGGCTCCCGCCGCGCCTCCTGGAGAGTGATCAGCT CTATTGAGGGCAAGGACACCGTGGTAAGAAGCATATGATTGACCTCGTCG GGTCCTAAGCGTAAGGGATGGAATAATGAGGTACCGTATAGCTCTCGTGA TGCCCCTTGGGAACAAAACAACTGACTTTTGAAAAGATGTATTTTGGTGT GGCGGCGCTTCTCTTTAAAGTAGTAATAGAAATCGGCAGCTTACAGGATA GAACACACGAGTTCTAGGAACCCTTGTCTACAGACAGTACTACCAAAGGA ACCCTTCTCTACAAACAGTACTACCAAAGAAACCCTTGTCTACAAACAGT ACTACTTAACTCCTTTACTACTGTATTTTTCTCCGACATATTTGTGACCG TTGGAGAGACCGCCCGAAGAAAACCCGCCACCCCTTTGTTTGCAAATCGA ATTATTTAACGTAACCCTAGAAATGTAAATTTCTCCAAGTTGTTACATGC ACAAGTAGTAGTACAATTCCTCAAGGTTATGTTGCATGGTAATGAAATAC TTGTTCGAACCTAAGCCAAGGACCTTCGACACTTGCCCGGCCATTCTCGC TTATCGCCTTCTCGGTGTAAATTTGTCACTCGTGGCTCTGCTGGGATACC ATCGGATGAATTCTTGTACTGGACACTGGACAACCAACTCGTCACCTGGC GCTCGAAGTAAAGAGCGATCAGCTACCTCTGATTCATGACTACAAGTCCA AGATCGAAACAGAGTTGACGGACATCTGCGACGACATCCTGAAGATCATC GAGTCCGAGCTGATCCCGAACTCAACCTCCGAAGAGGGAAAGGTGTTTTA CTACAAGATGAAGGGTGACTACCACCGGTGAGGGTTACTCAGAACACCGG CTTGTTGAGTTTGATATAAATATGCTGAACTAGAGTGACCTGACGTGGAC ACGTCTCTATCTCGTACTATACTGGTCTAGTAATTTTTTCAGTCGTACGT ATTGTCCATCCGGCCAGCTTTTTATACTGTTCTGACTCAAAAGTACCACC ATAATGCACTTTAAAAAAGGCCCCTTACTGTCGCCGAGCCGGTCGACCCC GGTAGCTCAGTCGGCACCTCGTAACCTTCTGACACGTTGGGACGTGAGTT CGATCCCGGCAAACGGGATTTTTCTCACTAAAAACTAAAAAACCAAAATA AAAATGCCCAACAGGTGGAGAACGATTAATTCGTTAGTACACAAAATTCG ACTTCACAGTCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGACCAA AAATCAAGGATTAAAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGC TGGTACGTCCAACGAACTTGATGTCCAGAATGGATGGGAAGAAAACACAC ACACTGTCGCCGAGGTGGTTCACAGCGCGTATGGCAGCATCAATTAGTTC GATGTGACCAGTCCCGCGTGTATGTCTTGTTGGGTTTGTTGGGACAAAGT ATAACATACCGATGTCCCCGAGATGGGTCTTGAAAGGCTGTACGCGCTCT GGACTGACAGCGACAATTTCATACAGAAAATTGTCTGTTTCTACTTGTAG TCCCCTTGCCCCGCCCAGAAGAAGCTTCCGAAAGTAAGGGCAACATATTA TGTAGTTACCATCCTGTAAGAGATTTTTGATAGGACGCTGGGGTTTGTGT CGTTCTCTTTTTTCGCGCGCCTTTGGCTGTCTTTGCGCGAGTGTATTCCG CACTTGTTACCAAACACCCGAAGAAGCCCATTTAAAAACGAGTGGTTGTT AGGTCCGCTACAATACAGGCCCGCTATTAAGAAACGGGAAATTGGCGCCT TTTTTTAGTTTTGCCAGCAATTGGTACGGTTTTGCGCTTTTGATCCCCTC CGCGTATCGGCCCAACCTCGCCTATCTCGTTTATCTCGTTAAGGCTTAAT TGGGTCGACACGCGAAAGGGGGGGGAGGAAGCGCAAGCCTAACATGCGCC TGCAAGACCAGGAACATTCCTGACATCCATATACAAATAATAAATGAGAG ATTTCGTACGCCCTCCTCACCACATTGGCACTTTGTTACGAATCCCCCGC CTTTTTTCGCAGGTATCTTGCGGAGTTCCAGTCCGCCGACGAACGGAAAA CTAGCGCCTCCGATGCCCTCGACGCCTACCAGTCAGCCTCTGAGCTTGCA AACCAGGACCTTCCCCCGACCCACCCAATCCGCCTGGGTCTTGCCCTCAA CTTCTCTGTCTTCTATTACGAGATCCTCAACTCCCCTCAGCGCGCGTGCA ACTTGGCGAAGGCGGTGAGTTGGCAAAAGCAGTTTCCTGAAAGTGTTGTT AGTGGCCTTGATCGTATGCCCCCCCCCCCCAAAATAAATATTGGTCTCTC TCTGTTTCACAGTAAAACTTGATTTACTGCGCCGTTCATATGTTTTATTA TGAAATCGAATTTTGTACGAACTGGAGACTGTGTAAGTATTCTCGTGATT TCTCGTTCTCGCCGCTGTTGATTGCCCGACAGGCATTTGACGACGCAATC GCAGAGCTCGACACGCTCTCTGAGGAGTCGTACAAAGACTCTACACTTAT CATGCAGCTCCTCCGCGACAACCTCACGCTGTGGACATCAGACCAGGGAG AGGCGGAGGAAGCACCCGGTAACGCCGACGGTACGGTGGTAGAGGACCTC TAA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1075:252768..256120+

>mRNA_A-nodosum_M_contig1075.12.1 ID=mRNA_A-nodosum_M_contig1075.12.1|Name=mRNA_A-nodosum_M_contig1075.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=753bp|location=Sequence derived from alignment at A-nodosum_M_contig1075:252768..256120+ (Ascophyllum nodosum dioecious)
ATGACCTCTCGCGACGATCTCGTTTACATGGCCAAGCTCGCTGAGCAGGC
CGAGCGCTTTGATGAAATGGTGGACCACATGAAGGCTGTTGCTCAGCAGC
CGAAGGAGCTCTCGGTTGAGGAGCGTAACCTCCTTTCTGTAGCGTACAAG
AACGTCATTGGCTCCCGCCGCGCCTCCTGGAGAGTGATCAGCTCTATTGA
GGGCAAGGACACCGTGAGCGATCAGCTACCTCTGATTCATGACTACAAGT
CCAAGATCGAAACAGAGTTGACGGACATCTGCGACGACATCCTGAAGATC
ATCGAGTCCGAGCTGATCCCGAACTCAACCTCCGAAGAGGGAAAGGTGTT
TTACTACAAGATGAAGGGTGACTACCACCGGTATCTTGCGGAGTTCCAGT
CCGCCGACGAACGGAAAACTAGCGCCTCCGATGCCCTCGACGCCTACCAG
TCAGCCTCTGAGCTTGCAAACCAGGACCTTCCCCCGACCCACCCAATCCG
CCTGGGTCTTGCCCTCAACTTCTCTGTCTTCTATTACGAGATCCTCAACT
CCCCTCAGCGCGCGTGCAACTTGGCGAAGGCGGCATTTGACGACGCAATC
GCAGAGCTCGACACGCTCTCTGAGGAGTCGTACAAAGACTCTACACTTAT
CATGCAGCTCCTCCGCGACAACCTCACGCTGTGGACATCAGACCAGGGAG
AGGCGGAGGAAGCACCCGGTAACGCCGACGGTACGGTGGTAGAGGACCTC
TAA
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