mRNA_A-nodosum_M_contig1075.10.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 1017 bits (2630), Expect = 0.000e+0 Identity = 547/826 (66.22%), Postives = 638/826 (77.24%), Query Frame = 1
Query: 169 MSTAEENTSSTC-VETGSTALSPP-GSGDPVD-----------EREPALQPPSRTETTFDGGGGKRVTVTLEEPARGKRKLSAWCWRVVSRFTPSINDKNVVCLVKRGDGSSCNHLMKWTPSKDGKKGTGTSGLISHIEKKHPDKYKEIMEEVSTSEERKAPVAAAIAGHSSAGTS---------SGGALPQYTRPKMDEKRREFADLRFVIWCCINLRPQHMRYDDGFKLFVGALAPEYVDTTMSQSTFDETLTTLHDRVTKHVMDDLRSFREECLAVGYSGAFLGAQLDLTTAAGEEYITFTASYVRKGSSDLTRVALAARAFPGTHTAEDIRPWIEALTREYFSDFMGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRWTSQFKMMDRLLALKKPISEYFRQHPQNAWKLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPPDGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDMEPAEPAPKKKRLSRLEERREARVRAAXXXXXDSARAEPQAAVTRRRVLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEATSCQAERNFSALAHLIGDLRSSMLASKVERMMFIRLNRHLIDEFRELDAAVAQARAGVAK 2580
MS E N +T V GS ALS +GD VD REP LQ S + T + G G+ ++VTL EP GKR+L+AWCW+V+SRFTPSINDKNVVCLVK+ DG++CNHLMKWTPS+ ++G+GT+GL HIEK HP ++I EE T ERK + AAIAG SSAG+S S +L Y PK+D+KRRE ADLRFVIWCCINLRPQ MR+DDGFKLF+GAL+P+YV++TMS TFD+ L TL+ RV ++DDLR+ REECL +GYSGAFLGAQLDLTT AGEEYITFT SYV KGS+D+TRVALA RAFPGTHTA+DI PWIE LTREYF+DFMGE VEPKDVFLAFTV +GGN+VNAC+ALGV V+KCNCHRVN+AVLW+LGI+G+ R NK MG+LMKKLA VGVFSHSAVNND +KELQ+LEED H +Y+LIRRNDTRWTSQFKMMDRLLALKKPI+EYFR+ P N+ KLT EWT+TNEVCSLL DVSE TIRMQGA DTH+SQAMFI+ EV+ ML+E+SHPIR NAT E QV EL+ AQ V EVLL+VME+K GKA +VERL AL+DPRRK+L +L NGSA LR +AEEDLK VIA+F D Q AP PAPVL+++P EPA K+K+LSRLEERR ARV AA S + Q + T RRVLI REVLVYLAE Q++VD FN+L FWNRR TDSVC TT VTSPAEMPYLAFIARL+ G+EA+SCQAERNFSAL+HLIG LR +ML+ KVERMM IRLNRHL+DE RELDAAV+ ARA AK
Sbjct: 1 MSALEGNPGATSSVGDGSAALSVARAAGDSVDGSDSVDVESVATREPELQSSSESRTMVNAGRGQSISVTLMEPQYGKRRLTAWCWQVMSRFTPSINDKNVVCLVKKKDGTTCNHLMKWTPSEGKQRGSGTTGLTKHIEKFHPTTAQKIKEEEGTQAERKESIQAAIAGDSSAGSSTALPSASASSSSSLVNYMVPKLDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGRR--NKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATE---------PEEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQF-DVQPSEPAPAPAPVLNVDPVEPASKRKKLSRLEERRAARVAAASDGGA-SGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAK 813
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 957 bits (2474), Expect = 0.000e+0 Identity = 513/821 (62.48%), Postives = 614/821 (74.79%), Query Frame = 1
Query: 190 TSSTCVETGSTALSPPGSGD---PVDEREPALQPPSRTETTFDGGGGKRVTVTLEEPARGKRKLSAWCWRVVSRFTPSINDKNVVCLVKRGDGSSCNHLMKWTPSKDGKKGTGTSGLISHIEKKHPDKYKEIMEEVSTSEERKAPVAAAIAG---------------------HSSAGTSSGGALPQYTRPKMDEKRREFADLRFVIWCCINLRPQHMRYDDGFKLFVGALAPEYVDTTMSQSTFDETLTTLHDRVTKHVMDDLRSFREECLAVGYSGAFLGAQLDLTTAAGEEYITFTASYVRKGSSDLTRVALAARAFPGTHTAEDIRPWIEALTREYFSDFMGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRWTSQFKMMDRLLALKKPISEYFRQHPQNAWKLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPPDGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDMEPAEPAPKKKRLSRLEERREARVRAAXXXXXDSARAEPQAAVTRRRVLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEATSCQAERNFSALAHLIGDLRSSMLASKVERMMFIRLNRHLIDEFRELDAAVAQARAGVAK 2580
TSS+ VE A GD V P LQ P +E + D G GK V VTLEEP GKR+L++W W SRF+PSIN KNVVCLVK+ DG+ C LMKW + GKKGTGTSG+ H+E H + + +V SE+ AP+ AA+ +S+ +SS L Y P M + R++ AD RFV+WCCI+LRP+ +R+D GFKLF+G+L+PEYV TTM++STF++TL L+ V V+ +LR+ REE L +GYSG FLGAQLDLTTAAGEEYITFT ++V+KG +D+TR+ALAARAFPG+HTAEDI+PWIE LT EYFS FMGE V+P DVFLAFTV +G NI+NAC ALGV V++CNCHR+N+AV+W+LGI+G N AMG LMKKLA VGVFSHSAVNND +KELQ+LEE F RIYEL+RRNDTRWTSQFKMMDR+LALKKPISEYF+++PQN KLT +EWT+TNEVCSLL DVSE TIRMQG+ DTHV QAMFI+ E+I ML E++HPIR PNATV+P PP+GIPT+ TQV +LT EAQ V EVL E M +KG G A + VERL AL+DPRRK+L +DQL NGSA LR +AE+DLK VIA+F D +AP PAPV++++P EPAPKKK+LSRLEERR ARV AA ++ E Q+ T RRVLI REVLVYLAE QLDVDGFN+L +WNRR TDSV TT VTSPAEMPYLAFIARLY G+EATSCQAERNFSALAHLIG LR +ML SKVERMMFIRLNRHL+ E RELDAAV +A+A K
Sbjct: 11 TSSSSVEAAGAAAGDSVDGDGSESVVPSVPVLQVPPESEASIDVGKGKTVKVTLEEPMEGKRRLTSWTWNFASRFSPSINGKNVVCLVKKADGTPCGRLMKWEGAALGKKGTGTSGISKHLEICHKSEVDKHKAKVGASEDNTAPIVAALGEFFFFCPRLKNKESRDGRVYRLYSAPSSSS---LMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKF-DVGPATAAPAPAPVMNLDPVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTK 825
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 836 bits (2160), Expect = 3.820e-294 Identity = 432/631 (68.46%), Postives = 513/631 (81.30%), Query Frame = 1
Query: 688 PKMDEKRREFADLRFVIWCCINLRPQHMRYDDGFKLFVGALAPEYVDTTMSQSTFDETLTTLHDRVTKHVMDDLRSFREECLAVGYSGAFLGAQLDLTTAAGEEYITFTASYVRKGSSDLTRVALAARAFPGTHTAEDIRPWIEALTREYFSDFMGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRWTSQFKMMDRLLALKKPISEYFRQHPQNAWKLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPPDGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDMEPAEPAPKKKRLSRLEERREARVRAAXXXXXDSARAEPQAAVTRRRVLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEATSCQAERNFSALAHLIGDLRSSMLASKVERMMFIRLNRHLIDEFRELDAAVAQARAGVAK 2580
P M + R++ AD RFV+WCCI+LRP+ +R+D GFKLF+G+L+PEYV TTM++STF++TL L+ V V+ +LR+ REE L +GYSG FLGAQLDLTTAAGEEYITFT ++V+KG +D+TR+ALAARAFPG+HTAEDI+PWIE LT EYFS FMGE V+P DVFLAFTV +G NI+NAC ALGV V++CNCHR+N+AV+W+LGI+G N AMG LMKKLA VGVFSHSAVNND +KELQ+LEE F RIYEL+R NDTRWTSQFKMMDR+LALKKPISEYF+++PQN KLT +EWT+TNEVCSLL DVSE TIRMQG+ DTHV QAMFI+ E+I ML E++HPIR PNATV+P PP+GIPT+ TQV +LT EAQ V EVL E M +KG G A + VERL AL+DPR ++L +DQL NGSA LR +AE+DLK VIA+F D +AP PAPV++++ EPAPKKK+LSRLEERR ARV AA ++ E Q+ T RRVLI REVLVYLAE QLDVDGFN+L +WNRR TDSV TT VTSPAEMPYLAFIARLY G+EATSCQAERNFSALAHLIG LR +ML SKVERMMFIRLNRHL+ E RELDAAV +A+A K
Sbjct: 3 PTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKF-DVGPATAAPAPAPVMNLDRVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTK 630
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 766 bits (1978), Expect = 1.160e-266 Identity = 425/643 (66.10%), Postives = 490/643 (76.21%), Query Frame = 1
Query: 676 QYTRPKMDEKRREFADLRFVIWCCINLRPQHMRYDDGFKLFVGALAPEYVDTTMSQSTFDETLTTLHDRVTKHVMDDLRSFREECLAVGYSGAFLGAQLDLTTAAGEEYITFTASYVRKGSSDLTRVALAARAFPGTHTAEDIRPWIEALTREYFSDFMGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRWTSQFKMMDRLLALKKPISEYFR-------QHPQNAWKLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPPDGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDMEPAEPAPKKKR-LSRLEERREARVRAAXXXXXDS-ARAEPQAAVTRRRVLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEATSCQAERNFSALAHLIGDLRSSMLASKVERMMFIRLNRHLIDEFRELDAAVAQARAGVA 2577
++ PKM +K+REF DLR+VIWCCIN RP MRYDDGFKLFVGAL+P+YVDTTM+ +TF++ L TLHDRV + V+DDLRS REECL +GY GAFLGAQLDLTT AGEEYITF SYV+KG +D++RV+LA RAFPG+HTA+DI+PWIEALT EYF+D MG VE +DVFLAFTV +G N+VNAC ALGV V++CNCHRVNSAVLW+LGI+GSA CKNK M KKLA VGVFSHSAVNNDM+KELQ+LE D HRIYE IRRNDTRWTSQ KMM RLL LKKPISEYFR Q+ Q KLT+HEWTVTNEVCSLL+ VSE TIRMQGA +TH+SQA FI+ E N + L DGI TE TQV LTLEAQDV +VL E+M++KG GKA +VERL LLDPRRKTL L NGS+ L+T+AE DLK +FA ++ PS P PAPV++++ AEPA KKK SRLE XXXXX +PQAA T RRVLI RE+LVYLAEQ Q+DVD FNLL FWNRR TDSV T VTSPAEMPYLAFIARL+ G+EATSCQAERNFSALAHLIGDL +ML+ +VERMM +RLN+HL+ E R DAAVA ARA A
Sbjct: 3 KFVAPKMLQKQREFVDLRYVIWCCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEGEGQ-----------NESSL----DGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTGKFAQ-ESAPSTPAPAPVVNVDTAEPARKKKXPTSRLEXXXXXXXXXXXXXXXXXXGTTDPQAAGTGRRVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAYDAAVAWARAMAA 625
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 744 bits (1922), Expect = 2.940e-258 Identity = 410/621 (66.02%), Postives = 473/621 (76.17%), Query Frame = 1
Query: 676 QYTRPKMDEKRREFADLRFVIWCCINLRPQHMRYDDGFKLFVGALAPEYVDTTMSQSTFDETLTTLHDRVTKHVMDDLRSFREECLAVGYSGAFLGAQLDLTTAAGEEYITFTASYVRKGSSDLTRVALAARAFPGTHTAEDIRPWIEALTREYFSDFMGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRWTSQFKMMDRLLALKKPISEYFR-------QHPQNAWKLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPP-----------------DGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDMEPAEPAPKKKRL-SRLEERREARVRAAXXXXXDSAR-AEPQAAVTRRRVLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEATSCQAERNFSALAHLIGDLR 2460
++ PK+ +K+REFADLR++IWCCINLRP MRYDDGFKLFVGAL+P+YVDTTM+ +TF++ L TLHDR+ + V+DDLRS REECL +GY GAFLGAQLDLTT AGEEYITF SYV+KG +D++RV+LA RAFPG+HTA+DI+PWIEALT EY +D MG VE +DVFLAFTV +G N+VNAC ALGV V++CNCHRVNSAVLW+LGI+GS CKNK M KKLA VGVFSHSAVNNDM+KELQ+LE D HRIYE IRRNDTRWTSQ KMM RLL LKKPISEYFR Q+ Q KLT+HEWTVTNEVCSLL+ VSE TIRMQGA DTH+SQA FI+ EVI ML + HPIRV +A V PPPP DGI T TQV +LTLEAQDV +VLLEVM++KG GKA VERL LLDPRRKTL L NGS+ L+T+AE DLK I +FA ++ PS P PAPV++++ AEPA KK SRL XXXXX +P+AA RRVLI RE+LVYLAEQ Q+DVD FN L FWNRR TDSV T V+SPAEMPYLAFIARL+ G+EATSCQAERNFSALAHLIGDLR
Sbjct: 3 KFVAPKVLQKQREFADLRYMIWCCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQNESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFIGKFAQ-ESAPSTPAPAPVVNVDTAEPARKKXXXTSRLXXXXXXXXXXXXXXXXXXXXXTDPKAAGAGRRVLIEREMLVYLAEQPQVDVDDFNPLGFWNRRGTDSVSAATGKVSSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLR 618
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 664 bits (1714), Expect = 4.590e-224 Identity = 388/788 (49.24%), Postives = 499/788 (63.32%), Query Frame = 1
Query: 298 TTFDGGGGKRVTVTLEEPARGKRKLSAWCWRVVSRFTPSINDKNVVCLVKRGDGSSCNHLMKWTPSKDGKKGTGTSGLISHIEKKHPDKYKEIMEEVSTSEERKAPVAAAIA------------GHSSAGTSSGGALPQY--TRPKMDEKRREFADLRFVIWCCINLRPQHMRYDDGFKLFVGALAPEYVDTTMSQSTFDETLTTLHDRVTKHVMDDLRSFREECLAVGYSGAFLGAQLDLTTAAGEEYITFTASYVRKGSSDLTRVALAARAFPGTHTAEDIRPWIEA--------LTREYFSDFMGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRWTSQFKMMDRLLALKKPISEYFRQHPQNAWKLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPPDGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDMEPA---EPAPKKKR-LSRLEERREARVRAAXXXXXDSARAEPQAAVTRRR-VLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEATSCQAERNFSALAHLIGDLRSSMLASKVERMMFIRLNRHLIDEFRELDAAVAQARAGVAK 2580
+T G +V VT+ GK+ +W W+V F P IN KNV C+ +C HLM W P+ GT G+ SH +KKHP YK +M++ +T+ + +A VAAA+A G AG+S+ ++ Y T + A+ RFV+WC IN+RPQ+MRYDDG+KL +G L P+YV++TMS +TF+ L+T++ V LR RE C+ +GY G FLGAQLDLTT A EEYITF+ SY+ + ++ +TRV LA RAFPG+HTA DI PWIE LT E+F+D MGE V+PKDVFLAFTV +GGN+VNAC L VEV+KCN HR+NS +W+LGI+GS +N AM +LMK+LA VGVFSHSAVNND +K++Q+L+E+F IYELIRRNDTRW SQ MM RLL LKK I EYFR + N KL+S EWTVTNEVCSLLD V+E T+++QGA DTH+SQ MF M E+ + + + IRVP+ P D + E QV +L E VREV+L ME K G A + +ER+CALLDPRRK + LVNGSA L+ A D+K V FA+A ++ +PAPKK++ LS LEERR R+ A + RA P A T RR ++ RE+ +YLAE + F+LLEFW RR C T V P +P+LA IARL+HG+E+TSCQAERNFSALA LIG LRSSML KVER+MF+RLNR I E + L AV +A A+
Sbjct: 48 STLHSNNGTQVVVTIVPQTSGKKTKRSWVWQVCREFKPLINGKNVFCM-------ACKHLMLWKPAD------GTGGMSSHYKKKHPALYKALMDDHTTTAQGRANVAAAVAFDPKPTGKATGKGKGKAGSSTP-SIKDYMQTGNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQ---PYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFAEADLGSASSXXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQRL--AKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEV-EPG-LPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAAR 814
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 647 bits (1670), Expect = 9.310e-222 Identity = 363/638 (56.90%), Postives = 417/638 (65.36%), Query Frame = 1
Query: 691 KMDEKRREFADLRFVIWCCINLRPQHMRYDDGFKLFVGALAPEYVDTTMSQSTFDETLTTLHDRVTKHVMDDLRSFREECLAVGYSGAFLGAQLDLTTAAGEEYITFTASYVRKGSSD-LTRVALAARAFPGTHTAEDIRPWIEALTREYFSDFMGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRWTSQFKMMDRLLALKKPISEYFR-------QHPQNAWKLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPPDGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDMEPAEPAPKKKRLSRLEERREARVRAAXXXXXDSARAEPQAAVTRRRVLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEATSCQAERNFSALAHLIGDLRSSMLASKVERMMFIRLNRHLIDEFRELDAAVAQARAGVAK 2580
KMD+K+R+ ADLR+VIWCCINLRPQ MRYDDGFKLFVG L+P+YVDTTM+ +TF++ L L+DRV + +MDDLR REE L +GY GAFLGA LDLTT A EEYITFT SYV+KG +D +TRVALA RAFPG+HTAEDI+PWIEALT EYF D +G V+P DVFL FTV +G NIVNA ALGV V++CNCHRVNSAVLW+LGI+G A CKNK MG+LMKKLA VGVFSHSAVNNDM+KE+Q+LE D HR+YE WTSQF+MM RLL L K I+EYFR QH Q KLT+HEWTVTNEVCSLLD VSEATIRMQGA DTH+SQA FI+ EV+ MLKE+SHPIRV NA V PPP Q L L AEE+ + A D T+ + QA VT RRVLI RE+LVYLAEQ QLDVDGFNL+ FWNRR TDSV T VTSPA+MPYLAFIARL+ G+EATSCQAERNFSALAHLIG+LR +ML +VERMM IRLNR ++DE R DAAV++AR K
Sbjct: 4 KMDKKQRDLADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRLEADLHRVYE--------WTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSHPIRVENAMVTPPP---------QAPGLIL------------------------------------------------------AEEEEQQHQASLVDISTE------------------------------------------------DTQAGVTGRRVLIEREMLVYLAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVRAFDAAVSRAREMATK 522
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 595 bits (1533), Expect = 2.470e-201 Identity = 340/508 (66.93%), Postives = 383/508 (75.39%), Query Frame = 1
Query: 1123 LTREYFSDFMGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRWTSQFKMMDRLLALKKPISEYFRQHPQNAW------KLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPP----------------DGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDMEPAEPAPKKKRLSRLEERREARVRAAXXXXXDSARAEPQAAVTRRRVLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEATSCQAERNFSALAHLIGDLRSSMLASKVERMMFIRLNRHLIDEFRELDAAVAQARAGVAK 2580
LT+EYF FMGE VEP DVFLAFTV +GGN+VNAC ALGV+V+KCNCHR+NSAV+W+LGI+GSA C+N MG LMKKLA VGVFS SAVNN M+KELQ+LE D HRIYEL+RRNDT SQFKMM RLL LKKPISEYFR+ PQ KL+SHEW VTNEVCSLL DVSE TIR+QGA DTH+SQAMF++ EV+ MLK+E+HPIR NA V PPPP G+ TE V +LT EAQ VR+VLLEVME+KG GKA +VERL ALLDPRRK L A Q+ NG LR AE DLK IA F A++ P P PAPV+D++PAEPA KKK+ SR+EE XXXXX A PQ VT R VLI REVLVYLAEQ Q+DVDGFNL+ FWNRR T+SVCPTT VT+PAEMPYLAFIARL+ G+EATSCQAERNFSALAHLIG LR +MLA KVERMM IRLNRHL+ E R LDAAVAQARA AK
Sbjct: 7 LTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATFT-AESVPPTPAPAPVVDVQPAEPALKKKKFSRIEEXXXXXXXXXXXXXXXXTVA-PQTPVTGRHVLIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEVRALDAAVAQARAMAAK 508
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE) HSP 1 Score: 535 bits (1379), Expect = 9.570e-172 Identity = 332/681 (48.75%), Postives = 396/681 (58.15%), Query Frame = 1
Query: 400 RFTPSINDKNVVCLVKRGDGSSCNHLMKWTPSKDGK-KGTGTSGLISHIEKKHPDKYKEIMEEVSTSEERKAPVAAAIAGHSSAGTSSGGALPQYTR-------------PKMDEKRREFADLRFVIWCCINLRPQHMRYDDGFKLFVGALAPEYVDTTMSQSTFDETLTTLHDRVTKHVMDDLRSFREECLAVGYSGAFLGAQLDLTTAAGEEYITFTASYVRKGSSDLTRVALAARAFPGTHTAEDIRPWIEALTREYFSDFMGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRWTSQFKMMDRLLALKKPISEYFRQHPQNAWKLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPPDGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDMEPAEPAPKKKRLSRLEERREARVRAAXXXXXDSARAEPQAAVTRRRVLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEA 2400
RFTPSINDKNVVCLVK+ DG++CNHLMKWTPS+ K +GTGTS L HI K HP K +E T +RK P+ AAI G + ++ PKMD+KRRE ADLRFVIW CINLRPQ MR+DDGFKLF+GAL+P+YV++TMS TFD+ L TL+ +V V+DDLR+ REECL +GYSGAFLGAQLDLTT AGEEYITFT SYV+KGS+D+TRVALA RAFPGTHTA+DIRPWIE L L + ++C AV +D D+ ATIRMQGA DTH+SQA+ I+ V+ ML+E+SHPIR NATV+PPPPDGIPT+ +V +L+LEAQ+V EVLLEVM +K KA +VERL AL+DPRRK+L +QL NGSA LR RAEEDLK VIA+F D Q A PAPVL+++P EPAPK+K+LSRLEERR ARV AA S + Q + T RRVLI R+VLVYLAE+ Q+DVD F +L W+RR TDSVC TT VTSP EMPYLAFIARLY G+EA
Sbjct: 211 RFTPSINDKNVVCLVKKKDGTTCNHLMKWTPSESNKQRGTGTSWLSKHIAKAHPATAKTRRDE-GTPADRKEPIRAAIV--------HGRFIDRFIISKRVELIVAGDMVPKMDKKRREMADLRFVIWRCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEEL----------------------------------RCLFLHCVQC--------------------------------------------AVQDD-------------------------------------------------------------------------DIFGATIRMQGAEDTHISQAIVIIHVVMEMLREDSHPIRAKNATVMPPPPDGIPTDEMEVTDLSLEAQEVLEVLLEVMGEKQVEKAVQQVERLSALMDPRRKSLNGEQLENGSAHLRKRAEEDLKAVIAQF-DVQPSEPASAPAPVLNVDPVEPAPKRKKLSRLEERRGARVAAASGVGA-SGSVQAQGSATNRRVLIERDVLVYLAEKEQVDVDEFKVLGSWSRRGTDSVCATTGQVTSPTEMPYLAFIARLYLGIEA 729
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 488 bits (1255), Expect = 5.840e-161 Identity = 279/481 (58.00%), Postives = 322/481 (66.94%), Query Frame = 1
Query: 1150 MGEFVEPKDVFLAFTVGEGGNIVNACEALGVEVIKCNCHRVNSAVLWSLGISGSAARCKNKAMGELMKKLATCVGVFSHSAVNNDMVKELQKLEEDFHRIYELIRRNDTRW-TSQFKMMDRLLALKKPISEYFRQHPQNAWKLTSHEWTVTNEVCSLLDDVSEATIRMQGAGDTHVSQAMFIMTEVIAMLKEESHPIRVPNATVLPPPPDGIPTESTQVAELTLEAQDVREVLLEVMEDKGAGKASLKVERLCALLDPRRKTLGADQLVNGSAALRTRAEEDLKGVIAEFADAQTQPSAPVPAPVLDME---PAEPAPKKKRLSRLEERREARVRAAXXXXXDSARAEPQAAVTRRRVLIGREVLVYLAEQGQLDVDGFNLLEFWNRRDTDSVCPTTSTVTSPAEMPYLAFIARLYHGVEATSCQAERNFSALAHLIGDLRSSMLASKVERMMFIRLNRHLIDEFRELDAAVAQARAGVAK 2580
MGE V P + FLAFTV +G NI+NAC AL V V++CNCHRVN+AV+W+LGI+ KN MG LMKKLA VGVFSHSAVNND +KELQ+LEE F RIYEL+RRNDTRW TSQ KMMDR LALKKPISE+F+++PQN KLT +EWT+ NEVCSLL DVSE TIR+QG+ DTH+ QAMFI+ EVI ML E++HPIR PNATV+P P +GIPT+ T V +LT EA V EVLL+VM KG G A + ERL AL+DPRRK LG+DQL NGSA L +AE+DLK VIA+F + S P PAEPAPK+K +SRLE R T SV PTT VTSPAEMPYLAFIARLY G+EATSCQAERNFSA +HLIG LR +L SK ER MFIRLNRHL+ E RELDAAVAQA+A K
Sbjct: 1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVVPVPEEGIPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGSADLSKKAEDDLKAVIAKFDVGPSTESTAAPXXXXXXXXXXPAEPAPKRKTVSRLE------------------------------------------------------------RGTSSVSPTTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSARSHLIGQLRCKILPSKFERTMFIRLNRHLVAEVRELDAAVAQAKATATK 419 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1075.10.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1075.10.2 >prot_A-nodosum_M_contig1075.10.2 ID=prot_A-nodosum_M_contig1075.10.2|Name=mRNA_A-nodosum_M_contig1075.10.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=846bp MEMENEVRTSSFSLCGQGTRANAHHTPAPRPAWSSRTMSTAEENTSSTCVback to top mRNA from alignment at A-nodosum_M_contig1075:210315..217068- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1075.10.2 ID=mRNA_A-nodosum_M_contig1075.10.2|Name=mRNA_A-nodosum_M_contig1075.10.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6754bp|location=Sequence derived from alignment at A-nodosum_M_contig1075:210315..217068- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1075:210315..217068- >mRNA_A-nodosum_M_contig1075.10.2 ID=mRNA_A-nodosum_M_contig1075.10.2|Name=mRNA_A-nodosum_M_contig1075.10.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=2538bp|location=Sequence derived from alignment at A-nodosum_M_contig1075:210315..217068- (Ascophyllum nodosum dioecious)back to top |