mRNA_A-nodosum_M_contig1071.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: D7G013_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G013_ECTSI) HSP 1 Score: 196 bits (498), Expect = 9.190e-53 Identity = 132/292 (45.21%), Postives = 162/292 (55.48%), Query Frame = 2
Query: 1376 LSGSASAVHFLLDRDLTSLEEEDQEGRTALHLAAGHRLGSDGTLRALLDAGADAEHTTALGETALHAACKSLRVSAVQILLRSGANEAAADMDGRNAVDMASELLQSQCPGVFRDMLDEIMRSLVKAPVDRVWRRRGWLLMLR---------------------SRERTVGLRGVVNLSGWGMGMGKEQWK-RGRSWKVSEISLAPFASLA-------------WCGTSGRERKADVGFPIRCAITVDAGLHVPAVEA----------LRSLVERVLGVDEDGVFRTIVSFI 2116
+SGS +AV FLLDRD++SLE D +GRTALHLA+GHRLGSD TLRAL+++ + E T LGET LH ACK+LRVSAV+ LLR GAN+AA D +GR M + LL SQ PG+FRDML I+ L AP DRVWRRRGWLLMLR +R G R + L G KE ++ + R KV + A A WC S E A V +G+H A E+ LRS+VER + VDEDGVFR IV+F+
Sbjct: 1 MSGSGAAVRFLLDRDISSLEARDHDGRTALHLASGHRLGSDETLRALVESNGNIEARTFLGETPLHKACKALRVSAVEQLLRFGANDAAVDAEGRTPAAMTARLLLSQRPGMFRDMLQNILTLLEAAPGDRVWRRRGWLLMLRRVGSSTATEPGSCHEKGVVAGARATPAGTRAIPGL----FGAEKEAYEHKARPRKVGKAGDAAVARATRKAAGGKREQHHPWCYQSTTE-----------AAGVWSGVHSAAAESCRDEAGGDRELRSVVERAVDVDEDGVFRNIVAFL 277
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: D7G014_ECTSI (Ankyrin domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G014_ECTSI) HSP 1 Score: 154 bits (390), Expect = 4.790e-38 Identity = 158/300 (52.67%), Postives = 185/300 (61.67%), Query Frame = 2
Query: 530 MDH--AGWPTPAKDILCGMGETLLALVCDSAPREQLASWLRVPLEHAGARG-----DLEC--------VLKLLAAGADPRVQR-VVRDRSPLVAAAQGGNSGVVSALLRSGVAPDGDENE----KSFSSPCDVISVPSASSDNSXXXXXXXXGTGGWTPLHFAASGGHVAIVRELVRAGADVDIEDEEGCSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSDGQTLFAHGSGGDQVEMSPLHRAALGGHCQVMRELLDHASSVNFTTGSSRTVLHA 1369
MDH A + + + L G+GE LL +V +SA EQL SWLRVPLEHA A + C LKLL AGAD V+R V DRSPL+AAAQ GN+ VVSALL +G APDG+E + FSS I+V + +S G TPLHFAASGGHV++VR L+ AGAD+D D + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LRGS L D +EM PLHRAALGGHC+VM ELL SS++ G++RT LHA
Sbjct: 1 MDHRFACKRSSSSNPLRGLGEELLTIVWESASSEQLGSWLRVPLEHAAAXXXXXXPEHRCNDDSSPALCLKLLEAGADAFVRRGPVLDRSPLLAAAQAGNAAVVSALLDNGSAPDGEEEDCWESSIFSSSSSAITVGVVDASSSYG--------GQRTPLHFAASGGHVSMVRALIGAGADLDTADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAHGSLGMVKAILRGSRESNLPCPT---DHLEMPPLHRAALGGHCEVMSELLRQGSSLHTLAGNARTALHA 289
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 137 bits (346), Expect = 1.540e-30 Identity = 171/541 (31.61%), Postives = 228/541 (42.14%), Query Frame = 2
Query: 590 LLALVCDSAPREQLASWLRVPLEHAGARGDLECVLKLLAAGADPRVQ-RVVRDRSPLVAAAQGGNSGVVSALLRSGVAPDGDENEKSFSSPCDVISVPSASSDNSXXXXXXXXGTGGWTPLHFAASGGHVAIVRELVRAGADVDIED------------EEGCS-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSDGQTLFAHGSGGDQVEM---SPLHRAALGGHCQVMRELLDHASSVNFTTGSSR-TVLHAAALSGSASAVHFLLDRDLT-SLEEEDQEGRTALHLAAGHRLGSDGTLRALLDAGADAEHTTALGETALHAACKS---LRVSAVQILLRSGANEAAADMDGRNAVDMASEL---LQSQCPGVFRDM--LDEIMRSLVKAPVDRVWRRRGWLLMLRSR---ERTV--GLRGVVNLSGWGMGMGKEQWKRGRSWKVSEISLAPFASLAWCGTSGRERKADVGFPIRCAITVDAGLHVPAVEALRSLVERVLGVDEDGVFRTIVSFI 2116
+ +V + A EQ A WLR PLEHA A G+L V +LL AG D + R R RS L AAA GGN+GV+SALL++G PD ++V ++S+ G + L+ + G H A R+L+ AGADV+ D + GC V + + L A G+ D ++ S L AA VM+ LL+H VN G LH AA S + LLD ++ +GRT+LH AA G++ L ALL GA+ TT G TALH + V ILLR GA+E A D +G+ VD+ + QS P + L+ + L +AP DR WRRR WL+MLR R ERT+ G R G G G+ KRG S V SGR R G R A+ VD LR LV ++ ++ DGVFRTI+ +I
Sbjct: 15 IFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPD--------------VNVVASST--------------GRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVDVN--VGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAA--ETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRRKGKKVGNGEGLLLGDGKRGGSNNVRR--------------SGRSRGRGGG---RAAVEVD----------LRGLVSVLVCLESDGVFRTILGYI 496
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 106 bits (264), Expect = 5.240e-20 Identity = 163/586 (27.82%), Postives = 225/586 (38.40%), Query Frame = 2
Query: 554 PAKDILCGMGETLLALVCDSAPREQLASWLRVPLEHAGARGDLECVLKLLAAGADPRVQ-RVVRDRSPLVAAAQGGNSGVVSALLRSGVAPDGDENEKSFSSPCDVISVPSASSDNSXXXXXXXXGTGGWTPLHFAASGGHVAIVRELVRAGADVDIEDEEGCSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSDGQTLFAHGSGGDQVEMSPLHRAALGGHCQVMRELLDHASSVNFTTGSSR----TVLHAAALSGSASAVHFLLDRDLTSLEEEDQEGRTALHLAAGHRL-------GSDGTLRA------------------------LLDAGADAEHTTALGETALHAACKSLRVSA---VQILLRSGANEAAADMDGR-------------NAVDMASELLQSQCPGVFRDMLD----EIMRS---LVKAPVDRVWRRRGWLLMLRSR-ERTVGLRGVVNLS-----GWGMGMGKEQWKRGRSWKVSEISLAPFASLAWCGTSGRERKADVGFPIRCAITVDAGLHVPAVEALRSLVERVLGVDEDGVFRTIVSFI 2116
P + +L G + L+ A EQ A WLR PLEHA ARG+L V +LL AGA+ R R R+ L AAA GGN VV+ LL SG A D ++V S SS S LH A+ GH A ++L+ AGADV+ D L G+ + A S G +SPL A+ GGHC + LL + +N T + A G + +++ ++ D G TALH A G + G+D +A LL G + T G +ALH C SL V +LLR GA+E A + +G +A D + ++C G D EI R+ L +AP DR WRRR WL+MLR+R ER G + S G + + + G + KV + + G + ER D G R A + GL VPA+ +G++ + VFRTIV F+
Sbjct: 5 PKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASD--------------VNVVSLSSRRSA--------------LHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRG----VSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENG-GNVRATDTYGLTALHHARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEAATGRNLPRHEEADGDNSKVGKTDAGAVGEGS--GPTDGERGRD-GRATRGAAAGEGGL-VPAL----------VGLESEEVFRTIVCFL 543
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE) HSP 1 Score: 103 bits (256), Expect = 3.720e-19 Identity = 177/560 (31.61%), Postives = 232/560 (41.43%), Query Frame = 2
Query: 560 KDILCGMGETLLALVCDSAPREQLASWLRVPLEHAGARGDLECVLKLLAAGADPRVQ-RVVRDRSPLVAAAQGGNSGVVSALLRSGVAPDGDENEKSFSSPCDVISVPSASSDNSXXXXXXXXGTGGWTPLHFAASGGHVAIVRELVRAGADVDIEDE-EGCSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSDGQTLFAHGSGGDQVEMSPLHRAALGGHCQVMRELLDHASSVNFTTGSSRTVLHAAALSGSASAVHFLLDRDLTSLEEEDQEGRTALHLAAGHR----------LGSD-----------------------GTLRALLDAGADAEHTTALGETALHAA--CKSLRVS-AVQILLRSGANEAAADMDGRNAVDMASELLQS---QCPGVFRDMLDEIMRSLVKAPVDRVWRRRGWLLMLRSRERTVGLRGVVNLSGWGMGMGKEQWKRGRSWKVSEISLAPFASLAWCGTSGRERKADVGFPIRCAITVDAGLHVPAVEALRSLVERVLGVDEDGVFRTIVSFI 2116
+ +L G + LV A EQ A WLRVPLEHA A G+L+ V KLL AGAD R DR+ L AA GGN+GV+SALL++G PD + + PS G + L+ + A+ REL+ AGADV+I+D E + XXXXXXXXXXXXXXXXXXXXXXXXXX L S A G +PL AA GH ++ LL + V+ E + ++ LH AAGH G++ L ALL GA + T G TALH A + +V V LLR GA+E A D + VD +E+ + + P LD + L +AP DR WRRRGWL+ML R + KE+ RG + E + L G GR + A G V A LR +V ++G++ +GVFRTIV ++
Sbjct: 7 RSLLKGQEVEIFKLVSKGATPEQWAEWLRVPLEHAAASGNLDLVNKLLKAGADGEAGWRGCGDRTLLDAALSGGNAGVMSALLQAGCGPDAN------------VLAPST----------------GRSVLYQSILSNQKAVARELILAGADVNIKDRAEKAGPLLAAVRAGCDDLXXXXXXXXXXXXXXXXXXXXXXXXXXAGMNKAKIVSVLLSSPMTDKDALVDG-----YTPLMVAAEQGHVATVKVLLAAGADVDVREVDYSCSAXXXXXXXXXXXXXXXXXXXXXXANEGVIDDQSPLHWAAGHNRPDCVAVLLDAGANINGRCNFLDNHXXXXXXXXXXXXEALLALLSRGARVDEKTDDGSTALHLAGHARGYKVDDTVDTLLRWGASEQAVDENDETPVDRLTEVAREVVWEWPE-----LDRALELLARAPADRAWRRRGWLVMLHERTK------------------KERHVRGDRPRKGEKVGSGEEVLLGDGERGRGKNA----------RRRGGAAVKA--DLRGVVNVLVGLESEGVFRTIVGYV 498
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 103 bits (256), Expect = 4.100e-19 Identity = 193/566 (34.10%), Postives = 252/566 (44.52%), Query Frame = 2
Query: 569 LCGMGETLLALVCDSAPREQLASWLRVPLEHAGARGDLECVLKLLAAGADPRVQ-RVVRDRSPLVAAAQGGNSGVVSALLRSGVAPD-----GDENEKSFSSPCDVISVPSASSDNSXXXXXXXXGTGGWTPLHFAASGGHVAIVRELVRAGADVDIEDEEGCSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSDG------------------------------------QTLFAHGSGGDQVEMSPLHRAALGGHCQVMRELLDHASS-VNFTTGSSRTVLHAAA-----LSGSASAVHFLLDRDL-TSLEEEDQEGRTALHLAAGHRLGSDGTLRALLDAGADAEHTTALGETALHAACKSLRVSAVQILLRSGANEAAADMDGRNAVDMASELLQSQCPGVFRDMLDE-IMRSLVKAPVDRVWRRRGWLLMLRSRERTVGLRGVVNLSGWGMGMGKEQWKRGRSWKVSEISLAPFASLAWCGTSGRERKADVGFPIRCAITVDAGLHVPAVEALRSLVERVLGVDEDGVFRTIVSFI 2116
L G + L+ A EQ WLR PLEHA A G+L+ +L+ AGA+ R R+ L AAA G + ++ LL +G D G E+E + LH AA+ G R L+ AGAD ++ D G S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++ +GS SPL AA GH V++ LLD SS V+ LH A + AV LL +++ + T LHLA + S GT+ ALL+ GA+ TA +T LH AC LR S V++LLR GA+E + DG D+ L Q+ R+ ++ I R L +AP DR WRRRGWL++ RS V + + S S IS S SG+ D D + LR LV R++G++ +G+FR +V F+
Sbjct: 14 LVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESA---------------------------------LHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGS-----RCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSS-------------------SSISRINGNSAKVARVSGQGSSRD-----------DEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 9.670e-17 Identity = 153/526 (29.09%), Postives = 215/526 (40.87%), Query Frame = 2
Query: 569 LCGMGETLLALVCDSAPREQLASWLRVPLEHAGARGDLECVLKLLAAGADPRVQ-RVVRDRSPLVAAAQGGNSGVVSALLRSGVAPDGDENEKSFSSPCDVISVPSASSDNSXXXXXXXXGTGGWTPLHFAASGGHVAIVRELVRAGADVDIEDEEGCSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSDGQTLFAHGSGGDQVEMSPLHRAALGGHCQVMRELLDHASS-VNFTTGSSRTVLH-AAALSG----SASAVHFLL--DRDLTSLEEEDQEGRTALHLAAGHRLGSDGTLRALLDAGADAEHTTALGETALHAACKSLRVSAVQILLRSGANEAAADMDGRNAVDMASELLQSQCPGVFRDMLDE-IMRSLVKAPVDRVWRRRGWLLMLRSRERTVGLRGVVNLSGWGMGMGKEQWKRGRSWKVSEISLAPFASLAWCGTSGRERKADVGFPIRCAITVDAGLHVPAVEALRSLVERVLGVDEDGVFRTIVSFI 2116
L G + LV A EQ WLR P EHA A G+L+ +L+ AGA+ R R+ L AAA G + +V L +G D+ F + + + A + +PLH AA GH +V L+ A V + XXXXXXXXXXXX L +L +GS SPL AA G V++ LLD S V+ T G LH AA++ G + AV LL D+++ +D T+L+LA R+ SDGT+RALL+ GA+ +T LH AC V++LLR GA++ G+ + L Q + ++ I R L + P R WRRRGWL++ RS V + S G S KV+++S + E AD + VD LR LV R++ ++ DGVFR +V F+
Sbjct: 14 LDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGAT---DDVNVLFGGEREALMIDGADPNVRDRRKR--------SPLHLAAVAGHHRVVGMLLLNRACVHAKTAS-------------------QXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRTNGS------RSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCD-TSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQI--ANGSSXXXXXXXXXXXXNGNSAKVAKVS-------GESSSRDDEETAD-------DMMVD----------LRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.800e-16 Identity = 146/523 (27.92%), Postives = 222/523 (42.45%), Query Frame = 2
Query: 569 LCGMGETLLALVCDSAPREQLASWLRVPLEHAGARGDLECVLKLLAAGADPRVQ-RVVRDRSPLVAAAQGGNSGVVSALLRSGVAPDGDENEKSFSSPCDVISVPSASSDNSXXXXXXXXGTGGWTPLHFAASGGHVAIVRELVRAGADVDIEDEEGCSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSDGQTLFAHGSGGDQVEMSPLHRAALGGHCQVMRELLDHASSVNFTTGSSRTVLHAAALSGSASAVHFLLDR--DLTSLEEEDQEGRTALHLAAGHRLGSDGTLRALLDAGADAEHTTALGETALHAACKSLRVSAVQILLRSGANEAAADMDGRNAVDMASELLQSQCPGVFRDMLD----EIMRSLVKAPVDRVWRRRGWLLMLRSRERTVGLRGVVNLSGWGMGMGKEQWKRGRSWKVSEISLAPFASLAWCGTSGRERKADVGFPIRCAITVDAGLHVPAVEALRSLVERVLGVDEDGVFRTIVSFI 2116
L G ++ LV + A EQ WLR+PLEHA A+G+L+ +L+ AG+ R R+ L A A G + +V ALL +GV D N + + + V +A N G+ LH AA GH ++ L+ GA VD + G + +XXXXXXXXXXXXXXXXX G D S L A GH +++ L+ V+ T + TVLH AA VH LL+ D+ + +++ T LHLA R+ S T+RA + +T LH AC + V++LL GA+ ++ +G D+ + G+ + ++ + R L +AP D+ WRR GWL++ RS V + N G G S K++ +S G++ D + + VD R L++R++G++ DG+FR +V F+
Sbjct: 14 LDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYD--RNVRFSAEGKSALHVAAARDPNLPACK-------GYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPT--------------GGRPDNGGWSSLPNAVCCGHATIVKAFLETGIDVDTTDDQAYTVLHRAA-DMDGCVVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADV---IRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQ---IGNRGGSGS-------SNSCSTKLARVS-------------GKDSSRDD--ELENQMMVD----------WRVLLDRLVGLEADGLFRLMVGFL 474
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 5.590e-15 Identity = 132/465 (28.39%), Postives = 174/465 (37.42%), Query Frame = 2
Query: 554 PAKDILCGMGETLLALVCDSAPREQLASWLRVPLEHAGARGDLECVLKLLAAGADPRVQ-RVVRDRSPLVAAAQGGNSGVVSALLRSGVAPDGDENEKSFSSPCDVISVPSASSDNSXXXXXXXXGTGGWTPLHFAASGGHVAIVRELVRAGADVDIEDEEGCSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSDGQTLFAHGSGGDQVEMSPLHRAALGGHCQVMRELL-DHASSVNFTTGSSRTVLHAAALSGSASAVHFLLDR--------------DLTSLEEEDQE------------------GRTALHLAAGHRLGSDGTLRALLDAGADAEHTTALGETALHAAC----KSLRVSAVQILLRSGANEAAADMDGRNAVDM-----ASELLQSQCPGVFRDMLDEIMRSLV---KAPVDRVWRRRGWLLMLRSR 1810
P + +L G + L+ A EQ A WLR PLEHA ARG++ V +LL AGAD R R R R+ L AA SG APD ++V S SS S LH A GH A R L+ AGA++ D G V + +T F +PLH AA G+ +V+ LL D ++S+N + L A+ +G S V LL D+ +LE E G LH +A H G D T+ ALL + + G +ALH AC +AV +LLR GA+E A D G D A+ + P M E+ R+LV +AP DR WRRR WL+MLR+R
Sbjct: 5 PKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPD--------------VNVVSVSSKRSA--------------LHLAVVCGHEAAARTLMIAGANIRRVDP-GDQCVPFHVAAEGGHGDLVGNLLIGGACP----------------------------NSRTRFGR---------TPLHVAAAVGNSRVVSTLLGDTSTSINARDNDLHSPLMLASANGHRSTVEALLRAGADTTLRCYSGGVSDMAALEMAGGEVVDVXXXXXXXXXXXXAGGSIPLHASAVH--GHDETMVALLKREGNFDEQDNAGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETPSDYLRRGAAAVASSNVTPRNSEKMQREMQRALVLLARAPADRAWRRRCWLVMLRAR 401
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 9.760e-15 Identity = 92/292 (31.51%), Postives = 131/292 (44.86%), Query Frame = 2
Query: 1295 VMRELLDHASS-VNFTTGSSRTVLHAAAL-------SGSASAVHFLLDRDLTSLEEEDQEGRTALHLAAGHRLGSDGTLRALLDAGADAEHTTALGETALHAACKSLRVSAVQILLRSGANE--------AAADMDGRNAVDMASELLQSQCPGVFRDMLDEIMRSLVKAPVDRVWRRRGWLLMLRSRERTVGLRGVVNLSGWGMGMGKEQWKRGRSWKVSEISLAPFASLAWCGTSGRERKADVGFPIRCAITVDAGLHVPAVEALRSLVERVLGVDEDGVFRTIVSFI*R 2122
+++ LD +S VN T T LH AAL G A V D+ + +D LH+A R+ S GT+RALL+ GAD T LH AC V+AV++LLR GA+E ADM G + D+ S+ + G I + L +AP DR WRRR WL++ RS V + N + G +G G S K++ S + G ER+ + + VD LR LV R++G++ DG+FR +V F+ R
Sbjct: 258 IVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSG-DVGSDHGDIEADG------QRIHQMLARAPADRSWRRRSWLVLSRSCPTRVK---IANENRSGSSVGSSSSSNGNSTKLARFSGED--------SGGGERETED------QMMVD----------LRGLVTRLVGLEADGLFRLVVGFLKR 515 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1071.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1071.1.1 >prot_A-nodosum_M_contig1071.1.1 ID=prot_A-nodosum_M_contig1071.1.1|Name=mRNA_A-nodosum_M_contig1071.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=596bp MQRFHFGVETAAAVHLSPEKSLAKKSPIKPFGSPSVSSSLRLLPHQAVAAback to top mRNA from alignment at A-nodosum_M_contig1071:55326..60989+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1071.1.1 ID=mRNA_A-nodosum_M_contig1071.1.1|Name=mRNA_A-nodosum_M_contig1071.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5664bp|location=Sequence derived from alignment at A-nodosum_M_contig1071:55326..60989+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1071:55326..60989+ >mRNA_A-nodosum_M_contig1071.1.1 ID=mRNA_A-nodosum_M_contig1071.1.1|Name=mRNA_A-nodosum_M_contig1071.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1788bp|location=Sequence derived from alignment at A-nodosum_M_contig1071:55326..60989+ (Ascophyllum nodosum dioecious)back to top |