mRNA_A-nodosum_M_contig10701.3.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: A0A6H5K5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J8_9PHAE) HSP 1 Score: 150 bits (378), Expect = 5.730e-40 Identity = 70/95 (73.68%), Postives = 85/95 (89.47%), Query Frame = 1
Query: 1 QPPLCLSVELSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPV 285
+PPLCLSV+L+VAQVAK+MAE+RTDA ILLG GDM+GILTDHDVARKV+G+SLDP+RTPV+S+M+PDP WV TD+A+DAL TM+E RHLPV
Sbjct: 376 KPPLCLSVDLTVAQVAKRMAEIRTDAAILLGQMGDMKGILTDHDVARKVVGRSLDPSRTPVSSVMTPDPIWVTTTDNAMDALETMLETHSRHLPV 470
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI) HSP 1 Score: 149 bits (376), Expect = 1.090e-39 Identity = 68/95 (71.58%), Postives = 85/95 (89.47%), Query Frame = 1
Query: 1 QPPLCLSVELSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPV 285
+PPLCLSV+L+VAQVAK+MAE+RTDA ILLG GDM+G+LTDHD+ARKV+G+SLDP+RTPV+S+M+PDP WV TD+A+DAL TM+E RHLPV
Sbjct: 2262 KPPLCLSVDLTVAQVAKRMAEIRTDAAILLGQMGDMKGVLTDHDIARKVVGRSLDPSRTPVSSVMTPDPIWVTTTDNAMDALETMLETHSRHLPV 2356
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: D7FJ79_ECTSI (CBS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ79_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 5.190e-21 Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 55 MAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPVSQG 294
MA+VRTDA ILL +G + GI++D DVAR+V+ LDP+ T V+ +M+P PT V D A++ L MIE+RFRHLPV G
Sbjct: 1 MADVRTDAAILLDNKGHLEGIISDQDVARRVVANRLDPSSTTVSEVMTPHPTIVHMADSAMECLGIMIEKRFRHLPVIDG 80
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: A0A7R9VL18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VL18_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 7.910e-21 Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 1
Query: 7 PLCLSVELSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPV 285
P+ S + SV V + +A R DA +L+GP G + GI+TD D+ R+V+ + +DP+ T V+++M+ PT V TD A+DALATM+E FRHLPV
Sbjct: 39 PMISSADDSVLSVTQMLANKRGDAALLVGPDGGLAGIVTDTDITRRVVAKHVDPSSTSVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPV 131
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: A0A7R9VME7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VME7_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.060e-20 Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 1
Query: 7 PLCLSVELSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPV 285
P+ S + SV V + +A R DA +L+GP G + GI+TD D+ R+V+ + +DP+ T V+++M+ PT V TD A+DALATM+E FRHLPV
Sbjct: 374 PMISSADDSVLSVTQMLANKRGDAALLVGPDGGLAGIVTDTDITRRVVAKHVDPSSTSVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPV 466
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: B8C5T2_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5T2_THAPS) HSP 1 Score: 87.4 bits (215), Expect = 1.370e-18 Identity = 43/94 (45.74%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 7 PLCLSVELSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPVS 288
P+ S SV V + +A R DA I+ G M GI+TD DV R+V+ + L P+ TP++ +M+ +PT V TD A +AL TM+E RFRHLPV+
Sbjct: 11 PIVSSSTDSVLSVTQMLASKRGDAAIITDQSGGMAGIITDTDVTRRVVAKHLSPSATPISDVMTANPTCVSMTDSATEALVTMVENRFRHLPVT 104
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: K3WV91_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WV91_GLOUD) HSP 1 Score: 87.8 bits (216), Expect = 4.260e-18 Identity = 38/86 (44.19%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 28 LSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPV 285
++VA+ AK+M R +AV++ +G++RGILTD D+ R+VL + +DP VAS+M+ +P+ V++ D A++A+ M+E RF+HLPV
Sbjct: 1467 ITVAEAAKRMRHARVEAVVITTEEGELRGILTDTDITRRVLSKDIDPETCSVASVMTANPSCVRSDDPAIEAITKMLEGRFKHLPV 1552
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: A0A5D6Y4M3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4M3_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 7.990e-18 Identity = 38/86 (44.19%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 28 LSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPV 285
++VA+ AK+M R +AV++ G++RGILTD D+ R+VL + +DP VA++M+ +P+ V+A D A++A+ M+E RF+HLPV
Sbjct: 2449 ITVAEAAKRMRHARVEAVVITTEDGELRGILTDTDITRRVLAKEIDPETCSVAAVMTANPSCVRADDPAIEAITKMLEGRFKHLPV 2534
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: H3GUG5_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=H3GUG5_PHYRM) HSP 1 Score: 87.0 bits (214), Expect = 8.000e-18 Identity = 39/86 (45.35%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 28 LSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPV 285
++VA+ AK+M + R +AV++ +G++RGILTD D+ R+VL + +DP VAS+M+ PT V D A++A+ M+E RF+HLPV
Sbjct: 2731 ITVAEAAKRMRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPESCSVASVMTTKPTCVFMEDQAIEAITKMLEGRFKHLPV 2816
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Match: M4BF33_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BF33_HYAAE) HSP 1 Score: 86.7 bits (213), Expect = 1.060e-17 Identity = 39/86 (45.35%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 28 LSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLGQSLDPARTPVASIMSPDPTWVKATDDALDALATMIERRFRHLPV 285
++VA+ AK+M + R +AV++ +G++RGILTD D+ R+VL + LDP VAS+M+ P+ V D A++A+ M+E RF+HLPV
Sbjct: 509 ITVAEAAKRMRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDLDPESCSVASVMTTKPSCVYMEDQAIEAITKMLEGRFKHLPV 594 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10701.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10701.3.1 >prot_A-nodosum_M_contig10701.3.1 ID=prot_A-nodosum_M_contig10701.3.1|Name=mRNA_A-nodosum_M_contig10701.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=100bp QPPLCLSVELSVAQVAKKMAEVRTDAVILLGPQGDMRGILTDHDVARKVLback to top mRNA from alignment at A-nodosum_M_contig10701:11573..12214+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10701.3.1 ID=mRNA_A-nodosum_M_contig10701.3.1|Name=mRNA_A-nodosum_M_contig10701.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=642bp|location=Sequence derived from alignment at A-nodosum_M_contig10701:11573..12214+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10701:11573..12214+ >mRNA_A-nodosum_M_contig10701.3.1 ID=mRNA_A-nodosum_M_contig10701.3.1|Name=mRNA_A-nodosum_M_contig10701.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=300bp|location=Sequence derived from alignment at A-nodosum_M_contig10701:11573..12214+ (Ascophyllum nodosum dioecious)back to top |