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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1838 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 1275 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866456.4933372-UTR-A-nodosum_M_contig1070:208686..208934 | 1680866456.4933372-UTR-A-nodosum_M_contig1070:208686..208934 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1070 208687..208934 + |
| 1680866456.536873-UTR-A-nodosum_M_contig1070:211489..211804 | 1680866456.536873-UTR-A-nodosum_M_contig1070:211489..211804 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1070 211490..211804 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866456.5068455-CDS-A-nodosum_M_contig1070:208934..209450 | 1680866456.5068455-CDS-A-nodosum_M_contig1070:208934..209450 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1070 208935..209450 + |
| 1680866456.5157773-CDS-A-nodosum_M_contig1070:209792..210206 | 1680866456.5157773-CDS-A-nodosum_M_contig1070:209792..210206 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1070 209793..210206 + |
| 1680866456.527162-CDS-A-nodosum_M_contig1070:211144..211489 | 1680866456.527162-CDS-A-nodosum_M_contig1070:211144..211489 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1070 211145..211489 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1070.28.1 >prot_A-nodosum_M_contig1070.28.1 ID=prot_A-nodosum_M_contig1070.28.1|Name=mRNA_A-nodosum_M_contig1070.28.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=425bp
MPSIQLRRLPEQKRVQRIADQCGLTEAYSDPYLQSPTRFFIASPEHPKMG
KWAQRSTLKYHRYDAPLCPHKGTSSLAPTRRNVRLQSCCYLVNERGRIVS
GLEASRRSGRRPLTSQQSKTPRRATSAKAKPAAARTKKRSTSPGPQRDES
AECHPETPTFSEPPIYTPISGRVISLHERTFHDVVIPSLPSGLWGSFNQR
RLPSPRVSAVVGAEQSSPAASSVSRTLQQAGILDTNVSLSTSLTGEGIPL
DHITESLRRAGGVKKEDGTCIRPTNHVLVPPDIRYRVRLEGTSLMRKSDG
VSGVGAPSNQAVGEKGSNTSCYTLGDDGHPAGNEELEGKGASQTRGTEAF
APTGATIVGSYLMGDICTKRGADGEDATGDPWVLSEVDPFILALRSALLL
DRPADVASYATEFSNNWPKIEKTA* back to topmRNA from alignment at A-nodosum_M_contig1070:208687..211804+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1070.28.1 ID=mRNA_A-nodosum_M_contig1070.28.1|Name=mRNA_A-nodosum_M_contig1070.28.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3118bp|location=Sequence derived from alignment at A-nodosum_M_contig1070:208687..211804+ (Ascophyllum nodosum dioecious)
GAGTCTGAGGCGTGGTCGGTTTGTTAATGGCGGTTCGTCCGCAACGTCTT
CCAAACGCAACCACGAAAGCTACCGTACGTCTGGGTGGATGCTCAGAAGA
TTTAGATGCGTTCAGAATTTTCTTGAAATTCGACATCTCGCCGCGTTTTG
CTTTTTCAGCCGCCGAAGTTCGAATATAACGCGTTTACGCGTAGGCATAA
TAAGCACGGGACAGTCACCTCGAAGGAGAAAGACAGAGAGAGGGAACGAT
GCCGAGCATTCAGCTGCGAAGGCTACCAGAGCAAAAGCGGGTTCAACGGA
TCGCCGACCAATGTGGTCTCACAGAGGCTTACAGCGACCCCTACTTGCAG
AGTCCCACGCGATTCTTTATCGCCTCGCCGGAGCACCCTAAGATGGGTAA
GTGGGCCCAGCGGAGCACCCTCAAGTACCACCGATATGATGCTCCCTTGT
GTCCACACAAGGGCACGTCATCGCTCGCTCCGACAAGAAGAAACGTACGG
CTACAGTCCTGTTGTTATCTTGTCAACGAGCGGGGAAGGATAGTATCAGG
ATTGGAGGCGTCGAGGCGATCAGGACGAAGACCCTTGACTTCTCAGCAAA
GCAAGACGCCCCGGAGGGCTACGTCAGCAAAGGCCAAGCCCGCGGCAGCA
AGGACCAAGAAACGTTCAACTTCGCCAGGACCACAGCGCGATGAATCTGC
AGAATGTCACCCTGAAACGCCCACTTTCAGTGAGCCTCCTATCTACACTC
CCATTTCAGGAAGGGTAAGACCTCTACCACCACGTACGGTAAGAGCTTCG
TGAAGACGCGTCGTATAATCATCTAAAGCTTGAGAGGAGGCAAACGTCGA
CCCCTTTGAGCTCAAGAGCCGAGTCAGTTTTCGTACGGCGCGCGATGCGG
CATGTGAACTAGTATATCTACTGCATCATCTAGAGCGAAACAACGTTTTG
CGATTAACGATGAGAACGAAAACATCCGTTCATCCGAAATGACGACACAA
GGTATGACGCGGAACCATCTGCTGCACCTTGCATCATCGCCTTCCCTCTA
CTACGTTCCGTGTGATTTATCGTTACAAATTTCCACTTTCTTTTATCGTA
TCAAAGGTGATTTCGTTGCATGAACGGACCTTTCACGACGTGGTGATTCC
TTCCCTGCCATCGGGGCTGTGGGGCTCGTTCAACCAGCGCCGCCTCCCAT
CGCCAAGGGTTTCGGCAGTGGTAGGCGCTGAACAAAGCTCCCCAGCAGCA
TCTTCTGTAAGCCGGACCTTGCAGCAGGCGGGTATACTAGACACCAACGT
CAGTCTCTCCACTTCACTCACGGGTGAGGGTATACCTCTAGATCATATAA
CCGAGAGTCTTCGCCGTGCCGGAGGGGTGAAAAAGGAGGACGGCACTTGT
ATCAGGCCGACGAACCACGTGTTGGTGCCGCCTGATATTCGATATCGGGT
GCGACTCGAAGGCACCTCCCTCATGAGGAAAAGCGATGGAGTCAGTGGCG
TGGGTGCGCCCTCAAACCAGGTAGGCACGCATGAAACACTCAGAAATTTC
ATATACAGCACAGTGTGTATGCCGTTGTTCCGCGGGCTGGGGTCCTTGCA
AGTGTTTTATCTCTATCTGAAAGTCCTGCTTGGCAAATTTGTTGTACTGT
AATTACAGTATCTTGACCTTAAAAGTACGTACAAGGCTAGTAATACTTGT
TCTGTCTCTTCTCGACGCAAATGTTATCACTACTTCATAACCGTGAATAC
ATCTAACCTATAGGAGTTAACTCTTATATGCATTTTAGAAGACCTGAGAT
CTACGAGACACGCTCTGCTTCTGCAAAAAAACAGAGTTTTTTCGCACGCC
TCTACCTCAAGTGTCCGGATTCCGAGTGTTCCAACGATTGGGGAGGGCGG
GGATACGACGATTCCGTCCCCGGGGATGGCACGAAAACAACCCCTTCCGG
GGATAAGACTACATGATGCCCTGCATGATCGGCAAGCTTGCCCCGAACTC
AATTCATTTCACCAGGGAGTTCGTCAAATAAGTCCCCCGGAGAGGCTATT
TTCGTGCCGTCCCCTCTCAAAACGGGGACAAGTTTGTTACATCCCCGCCC
CCCCCCAGTCGTTGAACGACTCTTCCCTCCTACCGTTTTAGAAACATTTT
TGCCGAGAAACGATGCGGCGGGGCAAGTTTGATCCAGGCGCAAGTGTTTT
CACGTTGTTCGGGTTTCGGAGGATCAGTTTCTTTGATATCCGACCGGTCG
AGATTGCTTGAGCCACACACCGTGACATTTGATCTAGATGCCGTCATGTT
GAAAGCTATTCCACCCTGCTAGCACTACTTATAATCATATATACTTGTAT
AATAATACTTATGGTGTGTGCCAAGCCGAAACCATTCGTCATACGAGTTC
GCAAAAATGACATCTACAACAACGGTTACTTTTGCCACTCGTCGGCAAAA
CAAAGCAGGCTGTGGGAGAGAAGGGATCAAACACATCCTGTTACACCCTT
GGTGATGACGGCCATCCTGCTGGGAACGAGGAGTTGGAGGGCAAAGGCGC
AAGTCAAACGCGAGGTACTGAAGCCTTCGCGCCGACCGGAGCAACCATTG
TCGGCAGTTACTTAATGGGTGATATATGTACGAAAAGGGGCGCTGATGGT
GAGGATGCCACCGGCGACCCGTGGGTTCTTTCGGAGGTAGACCCGTTCAT
CTTGGCATTGAGGAGCGCTTTGCTGCTGGATCGACCGGCTGATGTCGCCT
CTTACGCGACTGAATTCTCGAACAACTGGCCTAAAATTGAAAAAACTGCG
TGAGAGAGCGCATAAACATTGAATGTTTTACGAGAGAATGCCGCCTACAT
CAATCCTGACAAGCAAAAATCTTGACAACGTAGCTTGTTATGTATTGTTG
TCGTCGTACGTTGTGACTCCCATCGTGGAAAGTAGCGGTTTGGCGTCCAG
TTATACTTTTCTTTCTTTCTAGTAAAAGAGTCCCACTGCGGTAGTACTGT
ATGTATTTTCGTGTGTTTGGTGCGTCTACAACGTCCAAGCAGAGATGACT
CGACGACTGCCTGGGACAGCGACGGTTTCGGGGCTGTAAGAAAGGTAATA
ATCCAAGCAAGTTTAGAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1070:208687..211804+ >mRNA_A-nodosum_M_contig1070.28.1 ID=mRNA_A-nodosum_M_contig1070.28.1|Name=mRNA_A-nodosum_M_contig1070.28.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1275bp|location=Sequence derived from alignment at A-nodosum_M_contig1070:208687..211804+ (Ascophyllum nodosum dioecious)
ATGCCGAGCATTCAGCTGCGAAGGCTACCAGAGCAAAAGCGGGTTCAACG
GATCGCCGACCAATGTGGTCTCACAGAGGCTTACAGCGACCCCTACTTGC
AGAGTCCCACGCGATTCTTTATCGCCTCGCCGGAGCACCCTAAGATGGGT
AAGTGGGCCCAGCGGAGCACCCTCAAGTACCACCGATATGATGCTCCCTT
GTGTCCACACAAGGGCACGTCATCGCTCGCTCCGACAAGAAGAAACGTAC
GGCTACAGTCCTGTTGTTATCTTGTCAACGAGCGGGGAAGGATAGTATCA
GGATTGGAGGCGTCGAGGCGATCAGGACGAAGACCCTTGACTTCTCAGCA
AAGCAAGACGCCCCGGAGGGCTACGTCAGCAAAGGCCAAGCCCGCGGCAG
CAAGGACCAAGAAACGTTCAACTTCGCCAGGACCACAGCGCGATGAATCT
GCAGAATGTCACCCTGAAACGCCCACTTTCAGTGAGCCTCCTATCTACAC
TCCCATTTCAGGAAGGGTGATTTCGTTGCATGAACGGACCTTTCACGACG
TGGTGATTCCTTCCCTGCCATCGGGGCTGTGGGGCTCGTTCAACCAGCGC
CGCCTCCCATCGCCAAGGGTTTCGGCAGTGGTAGGCGCTGAACAAAGCTC
CCCAGCAGCATCTTCTGTAAGCCGGACCTTGCAGCAGGCGGGTATACTAG
ACACCAACGTCAGTCTCTCCACTTCACTCACGGGTGAGGGTATACCTCTA
GATCATATAACCGAGAGTCTTCGCCGTGCCGGAGGGGTGAAAAAGGAGGA
CGGCACTTGTATCAGGCCGACGAACCACGTGTTGGTGCCGCCTGATATTC
GATATCGGGTGCGACTCGAAGGCACCTCCCTCATGAGGAAAAGCGATGGA
GTCAGTGGCGTGGGTGCGCCCTCAAACCAGGCTGTGGGAGAGAAGGGATC
AAACACATCCTGTTACACCCTTGGTGATGACGGCCATCCTGCTGGGAACG
AGGAGTTGGAGGGCAAAGGCGCAAGTCAAACGCGAGGTACTGAAGCCTTC
GCGCCGACCGGAGCAACCATTGTCGGCAGTTACTTAATGGGTGATATATG
TACGAAAAGGGGCGCTGATGGTGAGGATGCCACCGGCGACCCGTGGGTTC
TTTCGGAGGTAGACCCGTTCATCTTGGCATTGAGGAGCGCTTTGCTGCTG
GATCGACCGGCTGATGTCGCCTCTTACGCGACTGAATTCTCGAACAACTG
GCCTAAAATTGAAAAAACTGCGTGA back to top
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