mRNA_A-nodosum_M_contig1069.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1069.1.1
Unique NamemRNA_A-nodosum_M_contig1069.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE)

HSP 1 Score: 402 bits (1034), Expect = 6.950e-136
Identity = 198/353 (56.09%), Postives = 256/353 (72.52%), Query Frame = 1
Query:    1 QALDISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAWL-GNGGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVN 1053
            QA  ++  S+++RL G   MDA VG  TVLT+EEE  +EDAL++AA   +G+ R  L++ V +LCNDGR +PWD   GPGR WLD F +RHP LSERS RIYEANRI +DDE RL++FY ++ E + K +   DH+WNTDETG+ +      +VI E GQKV G  RSNSREN TVV TI+AAG    P II+KGQR+QA W+ G  GPP +  A  DSSFMQG VFVNYI  DFH  +++ GL +G PH+LVLDGHASHV  +V++LA  LNI L+Q+PSHSSH+ QPLDV +FG FK+ +T VL++FP ++GG++P KSDM G++ DAW  SF+  +  +SF GAGLWPV+
Sbjct:   30 QAYGVNKRSLSRRLTGDESMDAKVGPRTVLTVEEESFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVIDSSFMQGTVFVNYI-RDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEERNTSSFAGAGLWPVD 381          
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI)

HSP 1 Score: 407 bits (1047), Expect = 2.180e-134
Identity = 201/353 (56.94%), Postives = 258/353 (73.09%), Query Frame = 1
Query:    1 QALDISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAWL-GNGGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVN 1053
            QA  ++  S+++RL G V +DA VG  TVLT+EEE  +EDAL++AA   +G+ R  L++ V +LCNDGR +PWD   GPGR WLD F +RHP LSERS RIYEANRI +DDE RL++FY ++ E + K +   DH+WNTDETG+ +      + IAE GQKVVG  RSNSRE  TVV TI+AAG    P II+KGQR+QA W+ G  GPP +  A TDSSFMQG VFVNYI  DFH  +++ GL +G PH+LVLDGHASHV  +VI+LA  LNI L+Q+PSHSSH+ QPLDV +FG FK+ +T VL++FP ++GG++P KSDM G++ DAW  SF+  Q  +SF GAGLWPV+
Sbjct:   30 QAYGVNKRSLSRRLSGDVSIDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVTDSSFMQGTVFVNYI-RDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEQQNISSFAGAGLWPVD 381          
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 4.370e-126
Identity = 192/355 (54.08%), Postives = 247/355 (69.58%), Query Frame = 1
Query:    4 ALDISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTVE--PAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAWLGN-GGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVNMD 1059
            A  IS +S+++RL G+  +DA VG GTV+T  EE +LED L++A    + +   +L + V +LCNDGR +PW    GPGR WL+ FL RH R+S R  RIYE+NR+T+ ++ RL  FY  W + I + QP  DH+WNTDE+G  TV+    QRV+AERGQ VV   RS SREN T+V TINAAG    P IIFKGQR    W+ +  GPPG+ +  T+SSFM G VF+ YI  +FH  + +  L DGKPH+LVLDGHASHV LDVI+LA++LNI L QLPSH SH+TQPLDVA FGCFKK +  V+ +FP ++GG +P K DMAG++  AW +SFT    KASF GAGLWPV+ +
Sbjct:   45 AYGISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGG-TVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGEVFIKYI-KNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRE 397          
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 6.660e-123
Identity = 192/352 (54.55%), Postives = 242/352 (68.75%), Query Frame = 1
Query:   10 DISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAWLGN-GGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVNMD 1059
            DI   S+ +RL G+V MDA VG GTV++ EEE S+ED L++A    L V RL L + V  LC D R  PWD   GPG+ WL  FL RHPR+ ER+ RIYEANR+T + EPR+  FY  W  L+  L+P+ DH+ NTDETG         +   + GQKVV + R+NSRENTT+V TI+A G+   P IIFKGQR+Q  W     GPP + +  TDSSFMQG VF+ Y+  DFH  + + GL DGKPHIL+LDGHASHV+++VIQLAM LNI LFQLPSH+SH+TQPLDV AFG FK+ VT VL+ +    GG +P K D+ GV+  AW A+FT  + ++SF GAGLWPVNM+
Sbjct:   32 DIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYL-KDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNME 381          
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 8.060e-123
Identity = 196/364 (53.85%), Postives = 253/364 (69.51%), Query Frame = 1
Query:    1 QALDISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITK-------LQPQPDHIWNTDETGALTVEPAQ-----RVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAWL-GNGGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVN 1053
            QA  ++  S+++RL G V MDA VG  TVLT+EEE  +EDAL++AA   +G+ R  L++ V +LCNDGR + WD   GPGR WLD F +RHP LSERS RIYEANRI +DDE  L++FY ++ E + K        Q + ++   TD   A+     Q     +VIAE GQKVVG  RSNSR+N TVV TI+AAG    P II+KGQR+QA W+ G  GPP +  A TDSSFMQG VFVNYI  DFH  +++ GL +G PH+LVLDGHASHV  +V++LA  LNI L+Q+PSHSSH+ QPLDV +FG FK  +T VL++FP ++GG++P KSDM G++ DAW  SF+  Q  +SF GAGLWPV+
Sbjct:   30 QAYGVNKRSLSRRLSGDVSMDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDISWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETCLQTFYKDFGEFVDKENIPTCGTQMRQEY---TDLERAVPGSTPQGTKTMKVIAESGQKVVGAMRSNSRDNVTVVVTISAAGATLAPWIIYKGQRMQADWVKGRNGPPNARLAVTDSSFMQGTVFVNYI-RDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVD 389          
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 3.940e-121
Identity = 196/369 (53.12%), Postives = 246/369 (66.67%), Query Frame = 1
Query:    1 QALDISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTV------EPAQRVIAERGQ---------KVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAW-LGNGGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVNMD 1059
            +   +  +SI  R +GK  M+A VG  T+L+ EEE SLE  L++AA   L V R+ L+ AV +LCNDGR +PWD   GPG+ WL  FLRRH R++ERS RI+EAN IT D+EPR+  FY  W  L+ +++P+ +H+ NTDET           E A+   A R           KVVG+ RSNSRENTTVVATI+A G    P IIFKGQR+QA W +   G  G+ +  TD SFMQG +F+ Y+  DFH  + + GL DGKPHIL+LDGHASHV+++VI+LAM L I LFQLPSH+SH+TQPLDV AFG FKK+VT VL SF    GG +P K DM GV+ DAW  SFT    K+SF GAGLWPVN +
Sbjct:   29 EVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGLEGAKYTCTDYSFMQGDLFIAYL-KDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKE 396          
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 2.910e-120
Identity = 192/352 (54.55%), Postives = 242/352 (68.75%), Query Frame = 1
Query:   10 DISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAWLGN-GGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVNMD 1059
            DI   S+ +RL G+V MDA VG GTV++ EEE S+ED L++A    L V RL L + V  LC D R  PWD   GPG+ WL  FL RHPR+ ER+ RIYEANR+T + EPR+  FY  W  L+  L+P+ DH+ NTDETG         +   + GQKVV + R+NSRENTT+V TI+A G+   P IIFKGQR+Q  W     GPP + +  TDSSFMQG VF+ Y+  DFH  + + GL DGKPHIL+LDGHASHV+++VIQLAM LNI LFQLPSH+SH+TQPLDV AFG FK+ VT VL+ +    GG +P K D+ GV+  AW A+FT  + ++SF GAGLWPVNM+
Sbjct:  273 DIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYL-KDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNME 622          
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: A0A6H5JGP6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP6_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 8.300e-118
Identity = 180/326 (55.21%), Postives = 231/326 (70.86%), Query Frame = 1
Query:   82 TVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAWL-GNGGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVN 1053
            TVLT+E E  +EDAL++AA   +G+ R  L++ V +LCNDGR +PWD   GPGR WLD F +RHP LSE S RIYEANRI +DDE RL++FY ++ E + K +   DH+WNTDETG+        +VIAE GQKVVG   S SREN TVV TI+  G    P II+KGQR+QA W  G   PP +  A T+SSFMQG VFVNYI  DFH  +++ GL +G PH+LVLDGHASHV  +V++LA  LNI L+Q+PSHSSH+ QPLDV +FG FK+ +  VL++F  ++GG++P KSDM G++ DAW  SF+  Q  +SF GAGLW V+
Sbjct:   16 TVLTVEGENFVEDALLYAARHFIGIDRAALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSECSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTPQGTKTMKVIAESGQKVVGAIHSKSRENVTVVVTISTVGATLAPWIIYKGQRLQADWAKGRNAPPNARLAVTNSSFMQGIVFVNYI-RDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREIPKVLSAFQARNGGRVPAKSDMLGLLGDAWLRSFSEEQNISSFAGAGLWLVD 340          
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 345 bits (884), Expect = 1.580e-112
Identity = 183/348 (52.59%), Postives = 228/348 (65.52%), Query Frame = 1
Query:   22 SSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTV-EPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQA-AWLGNGGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVNMD 1059
            +SI  R +GKV M+A VGA T+L+ EEE SLED L++AA   L VGR+ L+ AV +LCNDGR +PWD   GPG+ WL  F RRHPR++ERS RIYEANRIT D+EPR+  FY  W  L+ + +P+ +H+ NTDETG         +  AE GQKVVG+ R+NSRENTTVVATI+A G    P IIFKGQR+QA  ++   GP G+    TDSSFMQG VF+NY+  DFH  + + GL DGKPHIL+LDGHASHV+++VI+LAM L I LFQLPSH+SH+TQPLDV AFG FKK++                                      K+ F GA LWPVN +
Sbjct:   36 TSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGARHTCTDSSFMQGDVFMNYL-KDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSIN-------------------------------------KSLFAGASLWPVNKE 345          
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 3.480e-112
Identity = 181/347 (52.16%), Postives = 226/347 (65.13%), Query Frame = 1
Query:   22 SSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHLGVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCRIYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTVEPAQRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAAWLGN-GGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHILVLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAVTAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPVNMD 1059
            +SI  R +GKV M+A VG  T+L+ EEE SLED L++AA   L V R+ L+ AV +LCNDGR + WD   GPG+ WL  FLRRHPR++ERS RIYEANR+T D+EPR+  F+  W  L+ +++P  +H+ NTDET   + EPA                      T VVA I+A      P IIFKGQR+Q  W     GP G+ +  T SSFMQG VF+ Y+  DFH  + + GL DGKPHIL+LDGHASHV+++V +LAM L I  FQLPSH+SH+TQPLDV AFG FKK+VT VL SF    GG +P K DM GV+ DAW  SF     K+SF GAGLWPVN +
Sbjct:   15 TSIEDRRRGKVAMNAKVGPETILSNEEEDSLEDILLFAARNFLAVDRVHLRDAVRRLCNDGRRIIWDPDEGPGKDWLAGFLRRHPRVAERSTRIYEANRMTEDEEPRMVQFHERWAALLDEVKPAANHVHNTDETAGCSREPAA---------------------TNVVANISADDHTLAPTIIFKGQRLQTDWFAERNGPEGARYTCTGSSFMQGDVFIAYL-KDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKE 339          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1069.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5E2_9PHAE6.950e-13656.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B2KWI5_ECTSI2.180e-13456.94Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5JYX7_9PHAE4.370e-12654.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV04_9PHAE6.660e-12354.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK80_9PHAE8.060e-12353.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRA3_9PHAE3.940e-12153.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ12_9PHAE2.910e-12054.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JGP6_9PHAE8.300e-11855.21DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JFM5_9PHAE1.580e-11252.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2E0_9PHAE3.480e-11252.16DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1069contigA-nodosum_M_contig1069:31964..33343 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7091.BGIBMGA000981-TA
Model size1059
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.77e-42
EggNOG OGs2EKEE@1|root,2SQBK@2759|Eukaryota,3AKQY@33154|Opisthokonta,3C0X4@33208|Metazoa,3DGMT@33213|Bilateria,422K5@6656|Arthropoda,3SXKD@50557|Insecta,4489P@7088|Lepidoptera
Cds size1059
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866454.771804-CDS-A-nodosum_M_contig1069:31963..325691680866454.771804-CDS-A-nodosum_M_contig1069:31963..32569Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1069 31964..32569 -
1680866454.781381-CDS-A-nodosum_M_contig1069:32890..333431680866454.781381-CDS-A-nodosum_M_contig1069:32890..33343Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1069 32891..33343 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1069.1.1prot_A-nodosum_M_contig1069.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1069 31964..33343 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1069.1.1

>prot_A-nodosum_M_contig1069.1.1 ID=prot_A-nodosum_M_contig1069.1.1|Name=mRNA_A-nodosum_M_contig1069.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=353bp
QALDISVSSIAKRLKGKVRMDASVGAGTVLTLEEEKSLEDALIWAAHRHL
GVGRLELKQAVTKLCNDGRLVPWDRVNGPGRKWLDLFLRRHPRLSERSCR
IYEANRITADDEPRLRSFYANWKELITKLQPQPDHIWNTDETGALTVEPA
QRVIAERGQKVVGTKRSNSRENTTVVATINAAGTATPPLIIFKGQRVQAA
WLGNGGPPGSNFAATDSSFMQGAVFVNYIITDFHNFIVENGLADGKPHIL
VLDGHASHVNLDVIQLAMTLNIELFQLPSHSSHMTQPLDVAAFGCFKKAV
TAVLTSFPIQHGGKMPGKSDMAGVVKDAWAASFTVPQIKASFEGAGLWPV
NMD
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mRNA from alignment at A-nodosum_M_contig1069:31964..33343-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1069.1.1 ID=mRNA_A-nodosum_M_contig1069.1.1|Name=mRNA_A-nodosum_M_contig1069.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1380bp|location=Sequence derived from alignment at A-nodosum_M_contig1069:31964..33343- (Ascophyllum nodosum dioecious)
CAAGCGCTTGATATTTCTGTGAGCTCAATCGCCAAGCGCTTGAAGGGCAA AGTGAGGATGGATGCATCAGTTGGCGCTGGTACAGTTCTTACCCTGGAAG AGGAAAAATCACTAGAAGACGCCTTGATTTGGGCGGCACATCGACACCTC GGAGTTGGTCGATTAGAGCTCAAACAAGCGGTAACGAAGCTGTGCAACGA CGGCCGGCTTGTACCTTGGGATCGTGTGAATGGTCCTGGGCGAAAGTGGT TGGATCTCTTCCTCAGGCGGCACCCGCGACTCTCGGAGCGCAGCTGCCGC ATCTACGAAGCGAACCGTATTACCGCTGACGATGAACCGCGACTGAGGTC ATTTTATGCCAATTGGAAGGAGCTCATCACCAAGCTGCAGCCGCAGCCGG ATCATATCTGGAATACAGACGAGACAGGTGCGTTGACCGTAGAACCAGCG CAGGTACTCCCTGCCTCTCTGTGCAGTAGTGTACAACAGAACACCATAGA TGTTCCCCGGTTCCCTGTACAGCAGTCTGCAACAGCACAACACATTGTCT CCCCCCCCCCCCTTGTTGGACTGTTTGCTATTAATAGTAAGTGGTGCTGC CTGCACTGCCGTGACATGTGTAAGTAGAGCCTAAAATGTGTGCTGTCTGT TTTGCTTGGCCTGCACTGCTCTTTGTCTTGCCATGTGAAAACATGTCGTG TTTTGCACTTGACCTCTACACAAATCCACACGCACATTTGCGCAGGTGCT ACGCCGCAAGGCACCAAAGCAAAGCGAGTCATCGCTGAGAGGGGGCAAAA GGTGGTCGGTACCAAGCGTTCTAACTCCCGTGAAAACACCACGGTAGTCG CTACCATCAACGCGGCAGGGACGGCCACACCACCTCTGATAATCTTCAAA GGCCAACGTGTGCAAGCGGCGTGGCTCGGGAACGGTGGGCCTCCGGGGTC AAATTTTGCCGCCACTGACTCCTCGTTTATGCAGGGCGCTGTATTCGTGA ACTACATCATCACGGATTTCCATAACTTCATCGTGGAGAACGGCTTGGCG GACGGCAAACCGCACATTCTCGTGCTTGACGGCCACGCGTCGCACGTGAA CCTCGACGTTATCCAGCTAGCCATGACCCTCAATATTGAGCTCTTTCAAC TGCCGTCTCACTCCTCCCACATGACCCAGCCGTTAGATGTAGCGGCTTTC GGGTGTTTCAAGAAGGCAGTGACCGCGGTCCTCACAAGCTTTCCGATTCA GCACGGTGGTAAGATGCCGGGGAAATCCGACATGGCCGGGGTGGTCAAGG ATGCGTGGGCGGCGAGCTTTACGGTGCCACAGATCAAGGCTTCATTCGAG GGAGCAGGACTGTGGCCTGTGAACATGGAC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1069:31964..33343-

>mRNA_A-nodosum_M_contig1069.1.1 ID=mRNA_A-nodosum_M_contig1069.1.1|Name=mRNA_A-nodosum_M_contig1069.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1059bp|location=Sequence derived from alignment at A-nodosum_M_contig1069:31964..33343- (Ascophyllum nodosum dioecious)
CAAGCGCTTGATATTTCTGTGAGCTCAATCGCCAAGCGCTTGAAGGGCAA
AGTGAGGATGGATGCATCAGTTGGCGCTGGTACAGTTCTTACCCTGGAAG
AGGAAAAATCACTAGAAGACGCCTTGATTTGGGCGGCACATCGACACCTC
GGAGTTGGTCGATTAGAGCTCAAACAAGCGGTAACGAAGCTGTGCAACGA
CGGCCGGCTTGTACCTTGGGATCGTGTGAATGGTCCTGGGCGAAAGTGGT
TGGATCTCTTCCTCAGGCGGCACCCGCGACTCTCGGAGCGCAGCTGCCGC
ATCTACGAAGCGAACCGTATTACCGCTGACGATGAACCGCGACTGAGGTC
ATTTTATGCCAATTGGAAGGAGCTCATCACCAAGCTGCAGCCGCAGCCGG
ATCATATCTGGAATACAGACGAGACAGGTGCGTTGACCGTAGAACCAGCG
CAGCGAGTCATCGCTGAGAGGGGGCAAAAGGTGGTCGGTACCAAGCGTTC
TAACTCCCGTGAAAACACCACGGTAGTCGCTACCATCAACGCGGCAGGGA
CGGCCACACCACCTCTGATAATCTTCAAAGGCCAACGTGTGCAAGCGGCG
TGGCTCGGGAACGGTGGGCCTCCGGGGTCAAATTTTGCCGCCACTGACTC
CTCGTTTATGCAGGGCGCTGTATTCGTGAACTACATCATCACGGATTTCC
ATAACTTCATCGTGGAGAACGGCTTGGCGGACGGCAAACCGCACATTCTC
GTGCTTGACGGCCACGCGTCGCACGTGAACCTCGACGTTATCCAGCTAGC
CATGACCCTCAATATTGAGCTCTTTCAACTGCCGTCTCACTCCTCCCACA
TGACCCAGCCGTTAGATGTAGCGGCTTTCGGGTGTTTCAAGAAGGCAGTG
ACCGCGGTCCTCACAAGCTTTCCGATTCAGCACGGTGGTAAGATGCCGGG
GAAATCCGACATGGCCGGGGTGGTCAAGGATGCGTGGGCGGCGAGCTTTA
CGGTGCCACAGATCAAGGCTTCATTCGAGGGAGCAGGACTGTGGCCTGTG
AACATGGAC
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