mRNA_A-nodosum_M_contig1065.4.3 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1065.4.3
Unique NamemRNA_A-nodosum_M_contig1065.4.3
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: D8LRM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM7_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 3.390e-153
Identity = 225/308 (73.05%), Postives = 258/308 (83.77%), Query Frame = 3
Query: 2004 QVSSSQKSPVLSVACGSRVDTFATCARDGAVRVWDLCNFNVVMEAP-KCPRGAGGG-ALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYMVLGGDEETIKVLDLKNNCEAVACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFFGASASP 2921
            +VSSSQ+SPVLSVACG R D FATCA+DGAVR+W+LC+F VV EA  +  R AG   AL + WLG++AV+TGW+DC VRCYDA TG LRW IP AHRAAVTCC VR D  A+FLVTG+EDGSV VW LR+R +LLL FSEHQKGV  VLVDV  P+LVHS G DCTVLTYDLRKE+RT+ H+TR GAFQ MTQR+DSENELITCD+HGRLL WDCDY  PVQA+QDPS++RLS +SVSPSGRYM LGGD+E +KVLDL  NCE VACGRAHA AITSVQWT+DERQ++SAAEDC+LAIWNFFG+   P
Sbjct:   48 KVSSSQRSPVLSVACGDRCDAFATCAQDGAVRIWELCDFGVVAEASERSQRSAGSARALFLCWLGDEAVVTGWSDCSVRCYDAATGALRWAIPKAHRAAVTCCAVRFDSSASFLVTGAEDGSVSVWSLRTR-ELLLRFSEHQKGVTTVLVDVASPNLVHSAGTDCTVLTYDLRKEKRTVAHMTRGGAFQGMTQRIDSENELITCDIHGRLLTWDCDYPAPVQAMQDPSKQRLSCVSVSPSGRYMALGGDDELVKVLDLATNCETVACGRAHAGAITSVQWTRDERQLISAAEDCTLAIWNFFGSPPPP 354          
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: A0A7S2FKB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKB8_9STRA)

HSP 1 Score: 320 bits (820), Expect = 3.760e-95
Identity = 150/301 (49.83%), Postives = 206/301 (68.44%), Query Frame = 3
Query: 2007 VSSSQKSPVLSVACGSRVDTFATCARDGAVRVWDLCNFNVVMEAPKCPRGAGGGALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYMVLGGDEETIKVLDLKNNCEAVACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFFGA 2909
            VS    + V  V  G+R D FA+ + +GA++VWDL N++V+ E       A GGA C+ W+G+ AV++GW D FVRC+DA T    WEIP+AHR AVT     SD   +++++G EDGSVR+W LRSR +L+L F EH+KGV  VLVDV  P+LVHS G DC+V TYDLRKERR + H+ R GAF  +TQRLDSE EL+TCD++GRLL WDCD  +PVQ LQ P +  +  +SVSP+GRY+ + GD   + V DL+   + +A G  H+  +  + W+ DE+Q++S  +DC + +WNF+GA
Sbjct:  151 VSVGHTAEVTCVCFGTRSDVFASASSEGAIKVWDLNNYSVLAETRVT---APGGARCMCWIGDTAVVSGWEDHFVRCHDASTMQALWEIPNAHRGAVTTVATHSDASLSYVLSGGEDGSVRIWALRSR-ELMLQFVEHKKGVSQVLVDVKSPNLVHSAGLDCSVFTYDLRKERRCVAHMVREGAFTGLTQRLDSEQELVTCDMNGRLLFWDCDVPDPVQVLQSPQRMTMRCVSVSPTGRYLAICGDF-LVNVFDLRGGVQLMAQGLGHSEPVRDLYWSPDEKQVISVGDDCCICVWNFYGA 446          
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: A0A7S2BHX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHX7_9STRA)

HSP 1 Score: 320 bits (820), Expect = 7.120e-92
Identity = 150/301 (49.83%), Postives = 206/301 (68.44%), Query Frame = 3
Query: 2007 VSSSQKSPVLSVACGSRVDTFATCARDGAVRVWDLCNFNVVMEAPKCPRGAGGGALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYMVLGGDEETIKVLDLKNNCEAVACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFFGA 2909
            VS    + V  V  G+R D FA+ + +GA++VWDL N++V+ E       A GGA C+ W+G+ AV++GW D FVRC+DA T    WEIP+AHR AVT     SD   +++++G EDGSVR+W LRSR +L+L F EH+KGV  VLVDV  P+LVHS G DC+V TYDLRKERR + H+ R GAF  +TQRLDSE EL+TCD++GRLL WDCD  +PVQ LQ P +  +  +SVSP+GRY+ + GD   + V DL+   + +A G  H+  +  + W+ DE+Q++S  +DC + +WNF+GA
Sbjct:  430 VSVGHTAEVTCVCFGTRSDVFASASSEGAIKVWDLNNYSVLAETRVT---APGGARCMCWIGDTAVVSGWEDHFVRCHDASTMQALWEIPNAHRGAVTTVATHSDASLSYVLSGGEDGSVRIWALRSR-ELMLQFVEHKKGVSQVLVDVKSPNLVHSAGLDCSVFTYDLRKERRCVAHMVREGAFTGLTQRLDSEQELVTCDMNGRLLFWDCDVPDPVQVLQSPQRMTMRCVSVSPTGRYLAICGDF-LVNVFDLRGGVQLMAQGLGHSEPVRDLYWSPDEKQVISVGDDCCICVWNFYGA 725          
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: A0A7S2SRF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRF7_9STRA)

HSP 1 Score: 315 bits (806), Expect = 2.490e-90
Identity = 149/302 (49.34%), Postives = 203/302 (67.22%), Query Frame = 3
Query: 2007 VSSSQKSPVLSVACGSRVDTFATCARDGAVRVWDLCNFNVVMEA--PKCPRGAGGGALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYMVLGGDEETIKVLDLKNNCEAVACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFFG 2906
            ++SS    V  +A GSR D FA+ +  G ++VWDL ++ V+ EA         G G  CI+W+G+ A++TGW D F+RC+DA T    W +P+AHR  VT     SD   ++LV+G EDG+VRVW LRSR +LLL F+EH+K V  VLVDV  PHL+HS   DC +LTYD+++ERRT+ H+TR GAF  +TQRLDSE ELITCD++GRLL WDCD   PVQALQ PS+ ++   S+SP+GR++ + GD   + V DL    + +     H+  + SV+W+ DE+QIVS  EDC + IWNF+G
Sbjct:  376 IASSHTERVSCLAFGSRPDVFASVSHAGDLKVWDLSDYTVLAEAHVALADNLPGSGDACIAWVGDSAIVTGWRDRFIRCHDAATMQQLWHLPNAHRGPVTAVATHSDASLSYLVSGGEDGAVRVWSLRSR-ELLLQFTEHKKPVTRVLVDVKSPHLIHSSSLDCQLLTYDVKRERRTVAHMTREGAFTGLTQRLDSEQELITCDMNGRLLFWDCDVANPVQALQSPSRMKMKFASMSPTGRFLAVCGDF-LVNVFDLTRGIQLIVQAHGHSEPVASVEWSPDEKQIVSVGEDCCVCIWNFYG 675          
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: A0A7S2UWQ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ1_9STRA)

HSP 1 Score: 313 bits (803), Expect = 4.030e-90
Identity = 144/288 (50.00%), Postives = 202/288 (70.14%), Query Frame = 3
Query: 2052 SRVDTFATCARDGAVRVWDLCNFNVVMEAPKCPRGAGGGALCISWLGEDAVITGWNDCFVRCYDA-GTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYMVLGGDEETIKVLDLKNNCEAVACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFFGAS 2912
            +R D FA+ + DG++ VW+L ++++V    +   GA    LC+ W+G   V TGW DC VRCY+    G + W IP+AHRAA+T   V  D    ++VTG++DG+VR+W LRSR ++LL F+EHQKGV  V+VDV  P LVHS G DC VLTYD++KERRT+ H+ R GAF  ++QR+DSE EL+TCD  GR+  WDCD + P QALQDPS+ R+  +SVSPSG +M +GG++  +KVLDL  + + +A GR H++ ++ V W+ DE+QI+S  +DC + IWNF+G S
Sbjct:  383 ARSDVFASGSCDGSLLVWNLNDYSLVCRTGERESGA---LLCMGWVGTTRVATGWEDCCVRCYNVEAQGAMEWHIPNAHRAAITSLAVHHDERLGYIVTGAKDGAVRLWNLRSR-EMLLQFTEHQKGVSKVIVDVRLPKLVHSAGLDCAVLTYDIQKERRTVAHMVREGAFLGLSQRVDSEQELVTCDAAGRIFFWDCDVQGPTQALQDPSRDRIRAVSVSPSGHFMAIGGEDHLVKVLDLTADGDILAVGRGHSAPVSDVFWSPDEKQIISIGDDCCVCIWNFYGPS 666          
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: A0A7S3ZQS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQS9_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.050e-77
Identity = 139/309 (44.98%), Postives = 197/309 (63.75%), Query Frame = 3
Query: 2037 SVACGSRVDTFATCARDGAVRVWDLCNFNVVMEAPKCPRGA----------GGGALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYMVLGGDEETIKVLDLKNNCEA----VACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFFGASASP 2921
            ++A G R D FAT A DG V +WDL +++ +    +    A          GGGA C+ W+ + AVI G+ DC VRC+++G+G L W IP AHR  V+  T   +   A+LVTGS DGSVRVW L +R ++++ F+EH KGV  +L+D ++PHL HS G DC   T+D+ KE+RT+ H+ R GAF  +TQR+DSE EL+TCD  GR+L WDCD  EPV ++    Q  ++ ++VSPSG+Y  L  DE  + V +L     A    +A G AH++ ++SVQW+ DERQ+VS   D  + +WNFFG+ +SP
Sbjct:  401 ALAFGVRPDVFATAAADGEVIIWDLSDYSAIATTKRLTESAPNSVQRDAKFGGGARCLCWVADVAVIVGYGDCHVRCFNSGSGDLEWTIPTAHRKPVSAITCWVETKLAYLVTGSLDGSVRVWNLSTR-EMMMQFAEHLKGVTGLLIDAINPHLFHSAGSDCAAFTHDISKEKRTVGHMMREGAFTGLTQRIDSEQELVTCDASGRVLFWDCDAPEPVLSININGQS-VTCVAVSPSGKYFALCRDE-MVTVFELNVLATAPPKCIADGWAHSAVVSSVQWSPDERQLVSIGIDSCICVWNFFGSLSSP 706          
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: A0A835ZHC1_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC1_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.240e-77
Identity = 146/323 (45.20%), Postives = 196/323 (60.68%), Query Frame = 3
Query: 2007 VSSSQKSPVLSVACGSRVDTFATCARDGAVRVWDLCNFNVVMEAPKC-----------PRGAGGGALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDP-----------SQKRLSGISVSPSGRYMVLGGDEETIKVLDLKN-NCEAVACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFFG 2906
            VS++  + V +VA G R + FA  + DGA+RVWDLC++ VV  AP+                   AL ++WLG  AV+ GW+   V CYDA +G   W I  AHR AVT   V+ D   A+L+TGSEDG VRVW LR+R  L+  F+EH++GV AV VDV  PH VHS G D T  TYDLRKE+R   H  R G F S+TQR DSE+ELIT D  G +L WDCD R+PV A +             +  R+  ++VSPSGR++   GD+  +KV+DL + +   VACG  H+  + ++ W+ DE+QI+S   DCS+ +WNF+G
Sbjct:  384 VSAAHTARVTAVAAGPRAEAFAAASADGALRVWDLCSYGVV-SAPRALAAXXXXXXXXXXXXXXXALSLAWLGGGAVVAGWSGGGVACYDAASGAELWAIATAHRGAVTAVAVQLDAAVAYLLTGSEDGEVRVWSLRTR-ALMAQFAEHKRGVSAVAVDVALPHRVHSAGLDGTTFTYDLRKEQRVGTHAIRGGGFLSLTQRRDSEHELITGDALGDVLAWDCDARDPVMAARSXXXXXXXXXXXXAPPRVRCVAVSPSGRFLAASGDDGVVKVMDLGDEHWRVVACGHGHSDGVAALAWSCDEKQIISGGVDCSICVWNFYG 704          
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: F0YE13_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE13_AURAN)

HSP 1 Score: 273 bits (697), Expect = 2.170e-76
Identity = 142/312 (45.51%), Postives = 191/312 (61.22%), Query Frame = 3
Query: 2040 VACGSRVDTFATCARDGAVRVWDLCNFNVVMEAPKC---PRGA--------------GGGALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYMVLGGDEE-TIKVLDLKN---NCEAVACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFFGAS 2912
            VA G+R D FA+CA DG V VWDL  ++ +    +    P+G               G GA C++W+ + AV+ G+ DC VRC+ A  G L W IP AHR  V+      +   A+LVTGSEDGSVRVW L +R ++++ F+EH KGV  ++VD   P L HS G DC V T+DLR E+RT+ H+ R GAF  ++QR DSE ELITCD +GR+L WDCD  EP+  +       ++ ++VSPSGRY VL  DE  TI  LD  +   + + +A G AH++ +T VQW+ DERQ+VS   D  + IWNFFG S
Sbjct:  257 VAFGARADVFASCASDGEVVVWDLSTYDAIATTKRACAAPKGRPADAAERPRRVAQFGDGATCLAWVTDVAVVAGYGDCHVRCFSAADGALEWAIPTAHRRPVSAIACHVEQKLAYLVTGSEDGSVRVWNLSTR-EVMMQFAEHHKGVTGLVVDAADPRLFHSGGLDCAVFTHDLRSEKRTVSHMMREGAFTGLSQRKDSERELITCDANGRVLFWDCDVPEPILGVSVDGTT-VACVAVSPSGRYFVLCRDEMLTIFELDANSATAHPKPIAEGWAHSANVTKVQWSPDERQLVSIGADSCICIWNFFGTS 566          
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: A0A6G0W6V4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6V4_9STRA)

HSP 1 Score: 253 bits (647), Expect = 5.210e-69
Identity = 128/305 (41.97%), Postives = 192/305 (62.95%), Query Frame = 3
Query: 1992 LLFKQVSSSQKSPVLSVAC-GSRVDTFATCARDGAVRVWDLCNFNVVMEAPKCPRGAGGGALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYMVLGGDEETIKVLDLKNNCEAVACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFF 2903
            L  +++++S  +PV++V+  G   D+  T A+DG ++VWDL ++ V   A +    AGG ++C  +  + ++I+GW+D ++R +DA +G   W I  AHR  VT       V    +V+G+ DG V VW L +R +LLL F EH++GV  VLVD+  PH VHS G D  +  YDL+ ERR +VH  R GAFQ+M+QRLDSENE++T    GR+L WDCD  E V+ + DP++  ++ I VSPSGR++  GG++  +KV D++ +   +A    H+  I  V W+ DERQ+VS   DC + +WNFF
Sbjct:  321 LQVRELATSHLAPVMAVSFNGVSCDSLVTLAKDGTMKVWDLSSYTVQSSATE---NAGGRSVC--YTPQGSIISGWSDGWLRAFDAKSGARLWHISGAHRGDVTSVAANDKV----IVSGASDGGVNVWSLTTR-ELLLQFHEHKRGVTQVLVDLTKPHWVHSCGLDRALFIYDLKAERRVVVHQVREGAFQAMSQRLDSENEIVTGGADGRMLFWDCDVTEHVKLMVDPNRTGIASIQVSPSGRFLATGGEDCYVKVFDIQTDA-LLAYALGHSGGIQKVAWSPDERQLVSVGNDCCVCVWNFF 614          
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Match: A0A485LDT8_9STRA (Aste57867_19385 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDT8_9STRA)

HSP 1 Score: 249 bits (636), Expect = 8.130e-68
Identity = 128/302 (42.38%), Postives = 185/302 (61.26%), Query Frame = 3
Query: 2001 KQVSSSQKSPVLSVACGSRV-DTFATCARDGAVRVWDLCNFNVVMEAPKCPRGAGGGALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPHAHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKGVRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQRLDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYMVLGGDEETIKVLDLKNNCEAVACGRAHASAITSVQWTKDERQIVSAAEDCSLAIWNFF 2903
            +++++S  + V +VA G+   DT  T A+DG+V+VWDL  + V   A +    A G ++C++ +    ++TGW+D ++R Y   TG   W I  AHR  V+       V    +V+G+ DG V VW L +R  LL+ F EH++GV  VLVDV  P  VHS G D     YDL+ ERR +VH  R GAF +M QR+DSENE++T    GRLL WDCD  EPV ++ DP++  ++ + VSPSGRY+  GG++  +KV D+  +   +AC   H+ +I  V W+ DERQ+VS  +DC + IWNFF
Sbjct:  293 RELATSHVAAVTAVAFGATASDTCVTVAQDGSVKVWDLSTYTVRASAVE---NAAGCSVCVAPM-SGLIVTGWSDGWLRAYAGATGARAWHISGAHRGDVSSVAANDQV----VVSGASDGGVNVWSLATR-ALLIQFHEHKRGVTQVLVDVAKPQWVHSCGLDRAHFIYDLKLERRHVVHQVREGAFHAMGQRVDSENEIVTGGADGRLLFWDCDVAEPVTSMSDPNRMAIASLHVSPSGRYLATGGEDCHVKVFDIGADA-LIACALGHSGSIRRVTWSPDERQLVSVGDDCCICIWNFF 584          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1065.4.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM7_ECTSI3.390e-15373.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FKB8_9STRA3.760e-9549.83Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2BHX7_9STRA7.120e-9249.83Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SRF7_9STRA2.490e-9049.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UWQ1_9STRA4.030e-9050.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3ZQS9_9STRA1.050e-7744.98Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZHC1_9STRA1.240e-7745.20Quinon protein alcohol dehydrogenase-like superfam... [more]
F0YE13_AURAN2.170e-7645.51Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6G0W6V4_9STRA5.210e-6941.97Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LDT8_9STRA8.130e-6842.38Aste57867_19385 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1065contigA-nodosum_M_contig1065:6125..11467 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRM7
PFAMsWD40
Model size3353
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue7.42e-140
EggNOG OGsKOG0266@1|root,KOG0266@2759|Eukaryota
DescriptionWD repeat-containing protein
Cds size831
COG categoryB
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1065.4.3prot_A-nodosum_M_contig1065.4.3Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1065 8254..11074 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866450.8032925-UTR-A-nodosum_M_contig1065:6124..82531680866450.8032925-UTR-A-nodosum_M_contig1065:6124..8253Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1065 6125..8253 +
1680866450.8687186-UTR-A-nodosum_M_contig1065:11074..114671680866450.8687186-UTR-A-nodosum_M_contig1065:11074..11467Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1065 11075..11467 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866450.8153477-CDS-A-nodosum_M_contig1065:8253..83571680866450.8153477-CDS-A-nodosum_M_contig1065:8253..8357Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1065 8254..8357 +
1680866450.8240733-CDS-A-nodosum_M_contig1065:8998..91571680866450.8240733-CDS-A-nodosum_M_contig1065:8998..9157Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1065 8999..9157 +
1680866450.8345308-CDS-A-nodosum_M_contig1065:9430..95801680866450.8345308-CDS-A-nodosum_M_contig1065:9430..9580Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1065 9431..9580 +
1680866450.8431575-CDS-A-nodosum_M_contig1065:9949..100701680866450.8431575-CDS-A-nodosum_M_contig1065:9949..10070Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1065 9950..10070 +
1680866450.8517525-CDS-A-nodosum_M_contig1065:10630..107261680866450.8517525-CDS-A-nodosum_M_contig1065:10630..10726Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1065 10631..10726 +
1680866450.8602545-CDS-A-nodosum_M_contig1065:10873..110741680866450.8602545-CDS-A-nodosum_M_contig1065:10873..11074Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1065 10874..11074 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1065.4.3

>prot_A-nodosum_M_contig1065.4.3 ID=prot_A-nodosum_M_contig1065.4.3|Name=mRNA_A-nodosum_M_contig1065.4.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=277bp
MEAPKCPRGAGGGALCISWLGEDAVITGWNDCFVRCYDAGTGVLRWEIPH
AHRAAVTCCTVRSDVFAAFLVTGSEDGSVRVWELRSRWKLLLGFSEHQKG
VRAVLVDVVHPHLVHSVGEDCTVLTYDLRKERRTIVHITRRGAFQSMTQR
LDSENELITCDVHGRLLMWDCDYREPVQALQDPSQKRLSGISVSPSGRYM
VLGGDEETIKVLDLKNNCEAVACGRAHASAITSVQWTKDERQIVSAAEDC
SLAIWNFFGASASPLSDRSASNGKKR*
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mRNA from alignment at A-nodosum_M_contig1065:6125..11467+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1065.4.3 ID=mRNA_A-nodosum_M_contig1065.4.3|Name=mRNA_A-nodosum_M_contig1065.4.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5343bp|location=Sequence derived from alignment at A-nodosum_M_contig1065:6125..11467+ (Ascophyllum nodosum dioecious)
CGTGGACAGGGAAATATCAATTTTCCCTGTTCAGCTAACCACGTGCAAGA TTGGTAACCTTACCTGGTTGATCCATACTCTTGCTATATGTGTGACCATA CATACTGCCGTACTGGTTTTTCGTGCTTCAGATTTCAGTACGAACGGTTG AATCCGAAGGTACGCGAATTGCACAGTTCACGAGAAAAAAACAGTCAGGT GATGTACAGCAGTACAACATTTCAGTTCAGACTTTTGGGGTACCCAAGCA AACGATCGATCATAAGCGATACTACCATCCCCAGTCAAACACTCGCCGCG AACAACTAGCTGCACGACTTTTCGGAGACCCTTCCCGATCAAATACTTAC CGCGAATGCACGAGTTCTCGGAGACCACCATCCCTGAAAGAACAGCACCC GCTTCGAGAACAACCTAATGCACGAAAGCACAGACCGTGACAGAAAGACG GAGCTATATGAGGTACTACTGAAACAGTGCAGCAGTACAGCGTATCAACC AAACACAACTCCTAAAATAAGCATACCACACTATAGTAGCTGGTGTTGGA AGGTTGGTCGATGATGTTCCAGGAAACGCCGCATCCTCCCAACTTCAGTT CACGCTCAGCTCCGCGGACTTTGCCGTCAAGCTTCGCTCCATGACGCTCC CTGACAACCGTTCGCCCCTCCACCTCCTATAGCCTCAAGTCGCCCTCGAC GGCATGACTTTTTAGAACGATTCGTGGCGGAGAAAAACATTAGCCCGCAA TATGAATGGCATAAACGATTCGCATGCACCACTCCTGCAAGTTGATGCCC AAGTCATCGATTCTCCAAAAATACTGCAGATCGCCACCAGCCGCTCCAAA AGGAGAGAACCTCCCCACAAAACAACGCGCGCTAAGTTCCCAAAAACGGG CAGGCGCGGAGACGACCTAGAACCACCTGGATCGAACATCCTATTTTGCC CCAATTTTGCCTCAATGACCCTCCGGCAGGAGGGGGCAGCAGGCAGGTTA CTCTTCCAGAAGAAACTACTGTCGTACGAGACGGATTGAGTCGATGTCCT CAAGTTTGTCTCTTCGGTTAGGCAGAACCAAAAAGTTGGGTGATCGAAGG TGGTCTTCGTTGCCGTGGAGGTTTCGCCGGTGGGGAGTAAGCCACCGGTG GCTGTTGGTGAGCGCATCTCCAAGGGTGAGAAACACGACTTGGGCGCCGC AGCGCCGTTGTCTACCAGGGCATCCTCCCTTGAACAAGGGAGTGCCGGAG GTCCGGTGTAGTCATCACCAAAGCTGGTAGAATACATCGGGTCGGGATCA ACCCGGTTGGCAGAGCAGCTATCTTCATGCATCGCTTAAACTGCTACAGC GGCGCCCTCCGTGCGCTTGCGAGTCTTGGTGTCTGCTTGCACGTCTGCCT CTATGGCTAGGCATGGCTGCTGAGCGTCATGCTCCAGGCTTGCTAAACGC TGATCCAAACTTCTCAAAAATCCTCCTCATATTCTCGAAGAACTTCGCCC CACATCTCTGACACTGTTTGTCGGAAGTCCTCCAGTGTAATTCCACCTAG CATAGGAATGGGACCATTGCCCCCGGAGACAGCCATGCTCTCCTTCCGTG GCACGTTAGGGTAGACTCGACGTCAAGGCCACTAGTGGCACTAGTGTGTT AGTGCACCCTCGCCAGACGAAAGGTCAAGCATCTTGAAGAGATGGCGTAT AGAGCGTATTGTACTAACAGCGCAGCATCAGGGGAAGACACAGGAGACGT CTAAGGACCAGAAAAGACTGACTAGAAGGGGCTACCCCATACGTATAGTA TGACCCTACCAAAGTGTATAACGGAGCATAAAACCCCATCAAGAATAATG AACTATGATTCTCCCCCGACTCAGTGTAATCTATATACCGTAATCTCACA CTCCTTTGCTCGACCGGACCGACAGACACGATATGATTCGTGGTTAGTCA ACTCTACCACTCAAATGAAAGCGTCTCGAACTTTCACCTGATTGCTGTTC AAACAGGTTTCGTCGTCGCAAAAAAGCCCGGTCCTCTCCGTTGCATGTGG ATCACGAGTAGACACGTTCGCGACATGCGCTAGGGACGGTGCGGTCCGTG TGTGGGATCTTTGCAACTTCAACGTCGTGATGGAGGCCCCAAAATGTCCT CGTGGGGCCGGTGGGGGCGCCCTTTGCATTTCTTGGTTGGGGGAAGATGC CGTGATCACGGGTTGGAACGATTGCTTCGTAAGGTATTGTGAACGCTTTC GTGGGAATGGAGGCACGCGTAGAGCTAAAAAGGCGAGATTTCCCATTTCA TTCAGCTTCCTCGCGCAGAAATCTGGAGTTTAGATTCAACACTCGAGCTA CGGCTGGCGTATAACTGCGTTAACACCCAAGCTGGGCGAACGGTAAATAA CTGTTTTCCTCATCAATTTACGTAGTATTCAAGCATGTCTGCGTGCGTCA AACGATTTTAAACTGATTACAAATCAGTTAAAGATATCAGATGTGTGAAA ATTTACCATGACAGGGGGCGCACCGGCAGTGCCCGTGAGCCCTATGCAAC ACATTTTCACCCTTTGGAGCTTCGCCAGGGTTGCTATCTCCTCTCGAGTT GATAGTTGGTCCTCAGGAGTGCTGACTACGTTCTGTTAATATACTGAAAT CCCTTTGGACGTTTGTGCGGGGGGAGAAGCTTAACTATCGAGTCTCGTGG TCTCAACACACACATATGTATATTCACTACATTACTAGAATGTATCGTAG TACTGACTTCAAAGAGAAATATCCCACAGATCTCGCCCGACATACACGCA ACGTGGATTCCTCGTTGTGGAGACTGAGTCCAGCGCCACTCGTGTTCTAC GACCGGTGTTCCGTCATACGTCAGATGTTACGATGCCGGTACCGGTGTGC TGCGCTGGGAGATCCCGCACGCACACCGCGCTGCCGTTACCTGCTGCACC GTACGTTCCGACGTATTCGCGGCCTTCCTCGTCACCGGCTCGGAAGACGG TAGCGTCCGCGTTTGGGAGCTACGCTCCAGGTGGTTCAACCAGTCTGGTG ATATGAGTTCTACTGAACAGGGCATGGATGTGGAAAACGTTTTTTATGAA AACTTTTGTTTAGCCCTCGTGCGCCTTTGAAATTTATTGAATTACTTTCA TGAAGTCCCCCACGGGTTCATAAAAACTACTTGTTAACGAGGCTAATGAA CAATACTACATTTCGACGGAATAAGCAGCCTCGTACACACGCCGATTCGA GTGTCCTTTCCCCCGCCCACCCGTTTTGGTAATTGACAATTACCTTCGTG GCACAGGAAACTTTTGCTAGGGTTTTCTGAGCATCAGAAGGGAGTGAGGG CAGTATTGGTTGACGTTGTTCATCCCCATTTAGTGCACTCGGTTGGGGAA GATTGCACGGTGTTGACATACGATCTTCGCAAGGAAAGGCGGACCATCGT ACACATGTGAGCGGCACGGTGGCGTGTCCTTAATTCTTGTGAATAAAACT CACTACAGGAGAATAGTTCGGCATCAATGCTTGCACACCATTTCAGACCG AAATTGTTTTAGAGATGTACACGTGGTTAAGGAAGCCCGCTTGTATTTCA GATACTCTAGGTACTACTCCTGGGGGGCACCTTGCCTTTTTCGCCAATTC TACCCGGCAAAACAAAAGTAATATCCCTAATGACACCACTGTCCGGAAGG AGAATATGTAAGGTACAAAATATCTCAGTACGCAAGTCATAGCTCAAGCA TTGATCTGAGTACCAGCCTGCATGACTGCTTGCCGCGATGTTGGTGCCTG ATCCGCCTCGTCTTCGTCGCTGCAGAACTCGGAGAGGAGCGTTTCAGAGC ATGACCCAACGCCTAGACTCCGAAAACGAGCTGATTACGTGTGACGTTCA CGGGCGTCTGCTGATGTGGGACTGTGACTACCGCGAACCTGTGCAGGTAA CGAGGTTATAGATGTCGGTAGAAAGGAATTGCCTTAGAATATTTGCGACT GCTGTCCACACATCATCTACTTGAGTAAAAATACCACGAGAGGCTGCCCT AAGCTTCGTCAATTATTAGAAATAAAACGGCGTCTTCGTTAATCATGCCA TACGTATTTGATTCTCTCTCGTTCATCAATTCTTCGCTTCACTGATGCAT ATTCTCTTCTAAATCTCAAATCAATATCAACATATTTAACTAGAATAGGG CTGATAGCGTGTTTTTGCCGTCGGTTTTGGTGTGCTTAGAAGGCAATTAG AGTACCCTGTGTGCCTTATGACAATGAGTTTATTCCCGGCATCACACCGT TGACCCTATGCGACTACCACCGGGGAACTCGGCTAAATCTCATCTAAAGT TTTTGGTCTAACAGCCGGTGTTCTAAACTAAGCGCCTCAACTCCTTTCCC TCGGACGGTGTGGATACTCAGAATATTGAGATGCGTTCAGGTTTTTCTCT AGAACCTAAGATACAAGATTCACATATTTGCGTAATCTTACGTCTGCGAT GTACAGGCTCTGCAAGATCCCTCACAGAAACGTCTCAGCGGTATAAGCGT GTCGCCATCCGGGCGTTACATGGTACTTGGTGGTGACGAAGAAACAATCA AGGTGCGACTCCACCATACCATACCGCGAGAGACAGAAACGCTCCCAATA TTAAATATCGTACCATCAGAACAGAAGAGCTAAAACATGGTTAATGTTGA TTACAAGAAGATCTTCTACCAATCGGTACTCGCAACCCAAACAACCCAGG TCCTCGATCTAAAGAATAATTGCGAGGCTGTGGCGTGTGGGCGAGCACAT GCCAGCGCCATCACGAGCGTGCAGTGGACAAAGGATGAACGACAGATCGT CTCAGCGGCGGAAGATTGTTCCCTGGCAATATGGAATTTCTTCGGCGCAT CCGCTTCCCCTCTCAGTGATCGTTCCGCTAGCAACGGTAAAAAGCGGTAG AGAGCTGCAACAGAGAGGAAACGGTGCCAGCGGTTGGATATATATTTTTT AGTTTCCCCCTGGCGCCAGCGCATGGCATTGTAAACCACAGCGAGCCTTC AAATCCATGGACCGTAGGCAATGTGTTTCAGATTATGCTTTTTCTGGCGT GCGAGGACCTCAAACGTTGGAGGCTAGGGCGGGTACTGAACATAAGTACG TTTTCAGCGCCGGCCATTTAATCACCTAACCCCTTCCCCGAAAACTAAAA TGAACAAGAAAAAGTACGACTTTAGTGCAGAGCTTCCATCGAAGACATAA AATAATACAACATATAATTCGTTCTGCTCCGGGAACCCTACTCCACAACG CTGCCAAGGCGACCTGGTTAAGCTTATAGTAAATGAATCGAAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1065:6125..11467+

>mRNA_A-nodosum_M_contig1065.4.3 ID=mRNA_A-nodosum_M_contig1065.4.3|Name=mRNA_A-nodosum_M_contig1065.4.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=831bp|location=Sequence derived from alignment at A-nodosum_M_contig1065:6125..11467+ (Ascophyllum nodosum dioecious)
ATGGAGGCCCCAAAATGTCCTCGTGGGGCCGGTGGGGGCGCCCTTTGCAT
TTCTTGGTTGGGGGAAGATGCCGTGATCACGGGTTGGAACGATTGCTTCG
TAAGATGTTACGATGCCGGTACCGGTGTGCTGCGCTGGGAGATCCCGCAC
GCACACCGCGCTGCCGTTACCTGCTGCACCGTACGTTCCGACGTATTCGC
GGCCTTCCTCGTCACCGGCTCGGAAGACGGTAGCGTCCGCGTTTGGGAGC
TACGCTCCAGGTGGAAACTTTTGCTAGGGTTTTCTGAGCATCAGAAGGGA
GTGAGGGCAGTATTGGTTGACGTTGTTCATCCCCATTTAGTGCACTCGGT
TGGGGAAGATTGCACGGTGTTGACATACGATCTTCGCAAGGAAAGGCGGA
CCATCGTACACATAACTCGGAGAGGAGCGTTTCAGAGCATGACCCAACGC
CTAGACTCCGAAAACGAGCTGATTACGTGTGACGTTCACGGGCGTCTGCT
GATGTGGGACTGTGACTACCGCGAACCTGTGCAGGCTCTGCAAGATCCCT
CACAGAAACGTCTCAGCGGTATAAGCGTGTCGCCATCCGGGCGTTACATG
GTACTTGGTGGTGACGAAGAAACAATCAAGGTCCTCGATCTAAAGAATAA
TTGCGAGGCTGTGGCGTGTGGGCGAGCACATGCCAGCGCCATCACGAGCG
TGCAGTGGACAAAGGATGAACGACAGATCGTCTCAGCGGCGGAAGATTGT
TCCCTGGCAATATGGAATTTCTTCGGCGCATCCGCTTCCCCTCTCAGTGA
TCGTTCCGCTAGCAACGGTAAAAAGCGGTAG
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