|
|
Homology
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: D8LRK3_ECTSI (TFIIS N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK3_ECTSI) HSP 1 Score: 287 bits (735), Expect = 1.130e-81 Identity = 153/240 (63.75%), Postives = 193/240 (80.42%), Query Frame = 1
Query: 811 SEAEEDNGEETREEAPAQQSAMDAVLKSMKRRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVTSSGSTSHSVRRRASW---GHLKREDPSRDEAVGNILNAKARGM 1521
SEAEEDN E +AP ++SAM AVL SMK+RKAQ+LSTAEREQIAQEF++KIN+A+EDDE+AV+ GRPA+ K+KM++VVKATLAKKELQETFLEFDLLGV+ RWLQPY NG++PNLT+R ++L L+ LPVQVDHLKRSGIGK+VMGL N +EET ENK +R+LVSKWNRPVY ++ +YRA R +++ EA+EV + G G ++R+ S+DEAVGNILNA+ARG+
Sbjct: 326 SEAEEDNNPENFHDAPKKESAMTAVLASMKKRKAQDLSTAEREQIAQEFMFKINQAAEDDEEAVQNGRPAIYKIKMIRVVKATLAKKELQETFLEFDLLGVLKRWLQPYSNGQLPNLTVRTDILKLIENLPVQVDHLKRSGIGKVVMGLLNCREETTENKRRLRQLVSKWNRPVYEKETNYRARRPAQDDLEAMEVPTRGGXXXXXXXXXXXVVHGSMRRDGASKDEAVGNILNARARGL 565
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: A0A8K1CB40_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB40_PYTOL) HSP 1 Score: 158 bits (400), Expect = 1.000e-36 Identity = 95/234 (40.60%), Postives = 142/234 (60.68%), Query Frame = 1
Query: 685 EEAEAGDKEIRTQDDADFIDDTDDNPDLLAEYTNDAPPPGSESEAEEDNGEETREEAPAQQSAMDAVLKSMK--RRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEE 1380
+E ++GD+ +RT+DD FID DD D+L EY D E ED G E+ + LKS+K RR LS E+EQI QE +Y+++KA DD ++ E +PAL ++K + L K++LQ TFL+FDLL I +W+QP ++G +PNL +R +ML ++ LPV +HLKRSG GK+VM L+ EETR+NK + R+L+ +W+R V+ + Y + ++ E
Sbjct: 290 DEYDSGDEIVRTKDDDAFIDQDDDLEDVLGEYDEDDQKFEDERPLPEDVGGRKEEDY------FEETLKSLKTGRRAKMNLSVQEQEQIVQEVLYRMDKAHADDLASIAERKPALERIKYVDHAIRVLRKQQLQPTFLDFDLLSFIKKWIQPLEDGTLPNLGVRTKMLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRDNKDLCRDLIERWSRAVFDKTLDYSKLAELEAE 517
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: A0A2D4BW91_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW91_PYTIN) HSP 1 Score: 158 bits (400), Expect = 7.620e-36 Identity = 93/234 (39.74%), Postives = 144/234 (61.54%), Query Frame = 1
Query: 685 EEAEAGDKEIRTQDDADFIDDTDDNPDLLAEYTNDAPPPGSESEAEEDNGEETREEAPAQQSAMDAVLKSMK--RRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEE 1380
+E ++GD+ +RT++D +FID DD D+L EY + E E+D + R + + + LKS+K RR +LS E+EQI QE +Y+++KA DD ++ E RPAL ++K + L K +LQ TFL+FDLL I +W+QP +G +PNL +R ++L ++ LPV +HLKRSG GK+VM L+ EETRENK + R+L+ +W+R V+ + Y + ++ E
Sbjct: 651 DEYDSGDEVVRTREDDEFIDQEDDLADVLGEYDQEDQKFDDERPLEDDPRQPGRTK---DEDYFEQTLKSLKTGRRSKMQLSVQEQEQIVQEVLYRLDKAHADDLASIAERRPALERIKYVDEAVRVLRKHQLQPTFLDFDLLSFIKKWIQPLDDGTLPNLGVRTKLLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRENKELCRDLIERWSRAVFEKTLDYSKLAELEAE 881
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: A0A835YPY7_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY7_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.110e-35 Identity = 84/207 (40.58%), Postives = 131/207 (63.29%), Query Frame = 1
Query: 895 MKRRKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKN-GRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVTSSGSTSHSVRRRASWGHLKREDPSRDEAVGNILNAKA 1512
MKR + Q+LS AER+ AQ+F++ ++ A+ +DE+ V+EG+PA K+K LK V+ TL+K++L ET LE DLL + +W+ PY+ G +P+L +RK M A+LL LPV+ +HLKRS +G +M + EET ENK + +L+ KW RP+Y + R + ++EE IE+ S RR+A + ++ S E+V ++ A A
Sbjct: 1 MKRIRGQQLSIAERDTFAQDFMHFMDTAAAEDERLVREGKPAFAKIKALKAVQRTLSKQDLWETLLEVDLLTGVKKWISPYEGRGTLPSLDVRKAMYAILLTLPVEKEHLKRSQLGMTIMAMKQHPEETAENKRTLAQLIEKWCRPIYNKGTDLRELSRVQEE---IEL------SRDERRQAM---IPKKQTSAQESVKDVFQAAA 195
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: A0A485LKM7_9STRA (Aste57867_22366 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKM7_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.770e-35 Identity = 92/238 (38.66%), Postives = 142/238 (59.66%), Query Frame = 1
Query: 676 VREEEAEAGDKEIRTQDDADFIDDTDDNPDLLAEYTNDAPPPGSESEAEEDNGEETREEAPAQQSAMDAVLKSMKR---RKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEE 1380
V +E ++G++ RT+DD FIDD DD +L EY D E EE++ R EA + D +KSMK R ++S E E + QE +Y ++KA DD A+ E RPAL KLK++ V + K +LQ+ L+FDLLGVI +W+QP +NG +PNL +R +M+ + LP+ +HLKRSG GK++M L+ +E+ ENK + R+L+ +W+R V+ + + + ++ E
Sbjct: 84 VEGDEYDSGEEVERTKDDEAFIDDEDDLGGVLDEYNQDNQTFDDERPEEEEDRFTRRREA---EDFFDETMKSMKSGRGRSKLKMSQQEIETLTQEVLYNMDKAYNDDLVAMDERRPALEKLKLVDKVLLLMRKVQLQQPLLDFDLLGVIKKWIQPMENGSLPNLGLRTKMIEICQRLPIDKEHLKRSGFGKVIMTLWKHPDESVENKEICRQLIDRWSRSVFSKTLDFSKLGELEAE 318
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: A0A1V9ZKU1_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKU1_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.660e-34 Identity = 96/286 (33.57%), Postives = 160/286 (55.94%), Query Frame = 1
Query: 685 EEAEAGDKEIRTQDDADFIDDTDDNPDLLAEYTNDAPPPGSESEAEEDNGEETREEAPAQQSAMDAVLKSMKRRKAQE---LSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVTSSGSTSHSVRRRASWGHLKREDPSRDEAVGNILNAKARGMLSRR 1533
+E ++G++ +RT++D FID+ DD D+L EY ND E E+D R+ P D LKS+K +A+ LS E E + QE +Y+++KA DD +A++E RPAL KLK + + K +LQ L+FDLLG+I +W+QP ++G +PNL++R +ML + +P+ +HLKRS GK +M L+ +ET ENK + R+++ +W+R V+ + Y + ++ E +R A+ G+ ++ + G + + RG L++R
Sbjct: 91 DEYDSGEEAVRTKEDDAFIDNDDDLDDVLNEYGNDKQEFHDERPDEDDEPSSRRQREP---DYFDETLKSLKSGRAKSKMALSQQEMESLTQELLYRMDKAHSDDVQAMEEHRPALEKLKFVDNALMMMRKVQLQPMLLDFDLLGIIKKWIQPMESGTLPNLSLRSKMLDMCQRMPIYKEHLKRSSFGKAIMALWKHPDETPENKELCRQMIDRWSRSVFSKTLDYSKLAELEAE----------------KREANGGYYRQAEK---RPTGRTESVRNRGFLNKR 354
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: A0A067C2C7_SAPPC (TFIIS N-terminal domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2C7_SAPPC) HSP 1 Score: 147 bits (372), Expect = 2.310e-34 Identity = 93/256 (36.33%), Postives = 147/256 (57.42%), Query Frame = 1
Query: 685 EEAEAGDKEIRTQDDADFIDDTDDNPDLLAEYTNDAPPPGSESEAEEDNGEETREEAPAQQSAMDAVLKSMKRRKAQE---LSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEVTSSGSTSHSVRRRAS 1443
+E ++GD+ R++ D FID+ DD D+L EY ND E +D+ +E E + D +K +K +A+ LS + E I QE +Y+++KA DD +A+ E RPAL KLK + + K +LQ L+FDLLG+I +W+QP NG +P+L++R +ML + +P+ +HLKRSG GK+VM L+ +ET ENK + R ++ +W+R V+ + Y + E EA + ++G H +R S
Sbjct: 90 DEYDSGDEVKRSKADDAFIDNDDDLDDVLDEYGNDKQEFHDERPDMDDDEDEAPERQQRELDFFDETMKGLKSGRAKSKMSLSQQDMENITQELLYRMDKAYSDDVQAIDEHRPALEKLKFVDNALTMMRKVQLQPMLLDFDLLGIIKKWIQPLDNGALPSLSLRSKMLDMCQRMPIYKEHLKRSGFGKVVMSLWKHPDETPENKELCRLMIDRWSRSVFSKTLDYSKLG----EYEAEKREANGGYYHQAEKRPS 341
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: G5AGW9_PHYSP (TFIIS N-terminal domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G5AGW9_PHYSP) HSP 1 Score: 143 bits (361), Expect = 4.560e-33 Identity = 86/240 (35.83%), Postives = 141/240 (58.75%), Query Frame = 1
Query: 688 EAEAGDKEIRTQDDADFIDDTDDNPDLLAEYTNDAPPPGSESEAEEDNGEETREEAPAQQSAMDAVLKSMKRRKAQ---ELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEV 1398
E ++G++ + T++D DFID DD D+L EY +D + + E G+E + + D LKS+K +++ LS E EQI QE +Y+++KA DD ++ E RPAL K+K + L K + Q L+FDLL ++ +W+QP ++G +PN+ +R +ML ++ +PV +HLKRSG+GK+VM L +ET ENK + R LV +W+R V+ + + + ++ E E+
Sbjct: 74 EYDSGEEAVATKEDDDFIDGDDDLADVLGEYDDDR----QQFDDERPLGDEPEQTQQQKDDFFDRTLKSLKTGRSRTKLSLSPQEMEQITQEVLYRMDKAYADDLASIAERRPALEKIKFVDSALHVLRKLQFQPMLLDFDLLTIVKKWIQPLEDGSLPNVGLRTKMLEMVSKMPVFKEHLKRSGLGKVVMLLMKHPQETPENKELCRSLVERWSRAVFNKTLDFSKLAELEAEKAENEM 309
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: A0A6G0WK12_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WK12_9STRA) HSP 1 Score: 144 bits (362), Expect = 5.420e-33 Identity = 85/232 (36.64%), Postives = 138/232 (59.48%), Query Frame = 1
Query: 694 EAGDKEIRTQDDADFIDDTDDNPDLLAEYTNDAPPPGSESEAEEDNGEETREEAPAQQSAMDAVLKSMKR---RKAQELSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEE 1380
++G++ +RT+DD FIDD DD +L EY D + E +D G+ R + + + LKSMK R ++S E E + QE +Y ++KA DD+ A++E +PAL KLK++ V K +LQ L+FD LGV+ +W+QP +NG +PN+ +R +M+ + LP+ +HLKRSG GK++M L+ ET ENK + R+L+ +W+R V+ + + + ++ E
Sbjct: 102 DSGEEAVRTKDDDAFIDDEDDLGGVLDEYDQDNQ--NFDDERPDDEGD--RFTSRHEDDYFEETLKSMKTGRGRSKLKMSQQEIETLVQELLYNMDKAYNDDQVAMEEKKPALQKLKLVNSVLLLARKHQLQLPLLDFDFLGVVKKWIQPMENGLLPNIGLRTKMIEMCQTLPIDKEHLKRSGFGKVIMALWKHPHETPENKEICRQLIDRWSRSVFSKTLDFTKLSELEAE 329
BLAST of mRNA_A-nodosum_M_contig1065.36.2 vs. uniprot
Match: A0A0N7L6L7_PLAHL (Protein iws1 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6L7_PLAHL) HSP 1 Score: 140 bits (353), Expect = 5.720e-32 Identity = 88/244 (36.07%), Postives = 141/244 (57.79%), Query Frame = 1
Query: 685 EEAEAGDKEIRTQDDADFIDDTDDNPDLLAEYTNDAPPPGSESEAEEDNGEETREEAPAQQSAMDA---VLKSMKRRKAQE---LSTAEREQIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETFLEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIGKIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEEPEAIEV 1398
+E ++GD + T+DD DFID DD D+L EY + + D+ T E P Q+ D LK++K +A+ LS E EQI QE +Y+++KA DD ++ E RPAL K+K + L K + Q L+FDLL ++ +W+QP+++G +PN+ +R ++L ++ +PV +HLKRSG+GK+VM L +ET ENK + R LV +W+R V+ + + + ++ E E+
Sbjct: 82 DEYDSGDDVVATKDDDDFIDGDDDLADVLGEYNQE--------HQQFDDERPTSELQPLQEQKDDFFENTLKNLKTGRARSKLNLSPQEMEQITQEVLYRMDKAYADDLVSIAERRPALEKIKFVDNALHILRKVQFQPMLLDFDLLTIVKKWIQPFEDGTLPNVGLRTKILDMVSKMPVFKEHLKRSGLGKVVMVLMKHPQETIENKELCRSLVERWSRAVFNKTLDFSKLAELEAEKAENEI 317
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LRK3 |
| Preferred name | IWS1 |
| PFAMs | Med26 |
| Model size | 3021 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K17498 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000414,GO:0000988,GO:0000989,GO:0000990,GO:0000991,GO:0001076,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007154,GO:0007165,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009741,GO:0009742,GO:0009755,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010793,GO:0014070,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016458,GO:0016973,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0030702,GO:0031056,GO:0031060,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031503,GO:0031974,GO:0031981,GO:0032239,GO:0032268,GO:0032386,GO:0032774,GO:0032784,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033157,GO:0033993,GO:0034243,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035065,GO:0040029,GO:0042221,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0043933,GO:0043954,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046822,GO:0046825,GO:0046831,GO:0046907,GO:0048519,GO:0048523,GO:0048545,GO:0050657,GO:0050658,GO:0050684,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051049,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051253,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060303,GO:0060341,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070727,GO:0070827,GO:0070887,GO:0071166,GO:0071310,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0080090,GO:0090087,GO:0090239,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1901700,GO:1901701,GO:1901983,GO:1902275,GO:1902679,GO:1903311,GO:1903506,GO:1903507,GO:1903827,GO:2000112,GO:2000113,GO:2000197,GO:2000756,GO:2001141,GO:2001253 |
| Exons | 9 |
| Evalue | 9.3e-86 |
| EggNOG OGs | COG5139@1|root,KOG1793@2759|Eukaryota |
| Ec32 ortholog description | Transcription factor IIS, N-terminal |
| Ec32 ortholog | Ec-12_000120.1 |
| Description | regulation of histone H3-K36 trimethylation |
| Cds size | 1875 |
| COG category | K |
| BRITE | ko00000,ko03021 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866452.1652412-UTR-A-nodosum_M_contig1065:188961..189000 | 1680866452.1652412-UTR-A-nodosum_M_contig1065:188961..189000 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1065 188962..189000 + |
| 1680866452.3260045-UTR-A-nodosum_M_contig1065:199484..200406 | 1680866452.3260045-UTR-A-nodosum_M_contig1065:199484..200406 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1065 199485..200406 + |
| 1680866452.3357313-UTR-A-nodosum_M_contig1065:200581..200766 | 1680866452.3357313-UTR-A-nodosum_M_contig1065:200581..200766 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1065 200582..200766 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866452.1802626-CDS-A-nodosum_M_contig1065:189000..189711 | 1680866452.1802626-CDS-A-nodosum_M_contig1065:189000..189711 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 189001..189711 + |
| 1680866452.1901653-CDS-A-nodosum_M_contig1065:196339..196471 | 1680866452.1901653-CDS-A-nodosum_M_contig1065:196339..196471 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 196340..196471 + |
| 1680866452.2052906-CDS-A-nodosum_M_contig1065:196713..196875 | 1680866452.2052906-CDS-A-nodosum_M_contig1065:196713..196875 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 196714..196875 + |
| 1680866452.2180753-CDS-A-nodosum_M_contig1065:197094..197181 | 1680866452.2180753-CDS-A-nodosum_M_contig1065:197094..197181 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 197095..197181 + |
| 1680866452.2272415-CDS-A-nodosum_M_contig1065:197837..197978 | 1680866452.2272415-CDS-A-nodosum_M_contig1065:197837..197978 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 197838..197978 + |
| 1680866452.235709-CDS-A-nodosum_M_contig1065:198183..198425 | 1680866452.235709-CDS-A-nodosum_M_contig1065:198183..198425 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 198184..198425 + |
| 1680866452.2448003-CDS-A-nodosum_M_contig1065:198861..198927 | 1680866452.2448003-CDS-A-nodosum_M_contig1065:198861..198927 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 198862..198927 + |
| 1680866452.3145077-CDS-A-nodosum_M_contig1065:199150..199484 | 1680866452.3145077-CDS-A-nodosum_M_contig1065:199150..199484 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1065 199151..199484 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1065.36.2 >prot_A-nodosum_M_contig1065.36.2 ID=prot_A-nodosum_M_contig1065.36.2|Name=mRNA_A-nodosum_M_contig1065.36.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=625bp
MSEIDDMFGSDSSGDERQAKETVPDDDGDLFGSDSDSALNDPTPQGTNAD
VDSSSLVNADVDSSPQVNAGDDGEADVDPFADSDDEAGAGANSGKSLGRL
RKGGGVDEGTGKKSELAVEGKGSKGKKKKKDKLKKKKGKKRKRLSAVTDG
GEEEQQTQTVKKKKKKKKKETEKGVDRENAQQLEDLGLLSSGDDHEEEDE
EEEEADLEPVEPVREEEAEAGDKEIRTQDDADFIDDTDDNPDLLAEYTND
APPPGSESEAEEDNGEETREEAPAQQSAMDAVLKSMKRRKAQELSTAERE
QIAQEFIYKINKASEDDEKAVKEGRPALNKLKMLKVVKATLAKKELQETF
LEFDLLGVIARWLQPYKNGRIPNLTIRKEMLALLLMLPVQVDHLKRSGIG
KIVMGLFNSKEETRENKSVIRELVSKWNRPVYGQDASYRAMRSMKEEPEA
IEVTSSGSTSHSVRRRASWGHLKREDPSRDEAVGNILNAKARGMLSRRLR
GQGLRVTAANRISRWTRLLVRNCSRRWPTFRVPSRRARDGESASTRSARK
SRGVQICSERLCCGGGMWTWNAPVSFQPDESGNKTSASAKRSCFSDPCSQ
PWACCNGRSRFCNVISIFFCVLVW* back to topmRNA from alignment at A-nodosum_M_contig1065:188962..200766+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1065.36.2 ID=mRNA_A-nodosum_M_contig1065.36.2|Name=mRNA_A-nodosum_M_contig1065.36.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11805bp|location=Sequence derived from alignment at A-nodosum_M_contig1065:188962..200766+ (Ascophyllum nodosum dioecious)
TTTGAAACAGCCGAAGCCGACCCATCTCCTTCTACCACCATGTCTGAAAT
TGACGACATGTTCGGTTCCGACTCATCCGGAGATGAAAGGCAAGCCAAAG
AGACGGTGCCCGACGACGATGGCGATCTCTTCGGGAGTGACTCGGACTCT
GCGTTGAACGACCCAACCCCGCAAGGCACAAATGCCGACGTTGACTCAAG
TTCCCTAGTCAATGCCGACGTTGACTCAAGTCCCCAAGTCAATGCCGGCG
ATGACGGGGAGGCTGATGTCGACCCTTTCGCGGATAGCGACGACGAGGCC
GGCGCTGGTGCTAATAGTGGTAAAAGTCTAGGGCGGTTGCGGAAGGGAGG
TGGGGTGGACGAAGGGACAGGGAAGAAAAGCGAACTGGCGGTTGAGGGCA
AAGGATCAAAGGGCAAAAAGAAAAAAAAGGATAAGCTCAAGAAGAAAAAG
GGCAAGAAGCGGAAACGGCTCTCCGCAGTCACCGACGGCGGGGAAGAAGA
GCAGCAGACGCAGACAGTTAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAA
CTGAGAAGGGGGTTGACCGGGAGAACGCGCAGCAGCTGGAGGATCTGGGC
TTGCTTTCATCGGGGGATGATCATGAGGAGGAGGATGAGGAGGAGGAAGA
AGCCGATCTCGAGCCCGTGGAGCCTGTGCGAGAAGAGGAGGCGGAAGCGG
GAGATAAAGAGATCCGCACGCAAGACGACGCCGACTTCATCGATGACACG
GTGAGTTCTCCTGTTAAGTGAGCAGTATATCGAACAGCGTTCTCTGTAGC
CTGTAATTCAAATTCTGGATTGTTGTCAGAACTCTAGACAGAGTATACTT
GTAGATTCATTTATTAGCATAGATAACTGCGCAATCCAGCCCTTGCTCCT
TTTAGAGAAAATCTGAACTAACGCGTCTATGCTAAACCTTCTGAGCACGG
AGAGCATCCCCCAGACACAAGACAGGGGAGAAAATCGTCACAAGTGTTTG
GGTGGAAACCTAGGCTGCCAAGACAAACCTCTTCGTGGCATTTAATCGGG
TTCCCCAATGGTAGTAACATAGGGTCAACAGTATAATGTCGGGGAGAAAA
ACACCGTTATATTTACTGTACGCTTACATTAATCGCCCATGGCAGGGACA
CCAAAACAGAGACAAAAAACACGATAAGCCTGGATACAGCTCAACTTTGT
TACATTGCATAGGATCGGATGGGTTTCAGCGCTACTAAATATATGGTATA
GGTACACGACCACCACAGTATTCGCTCTGTGAAAGCGAAAAAGACAAGGT
ACATGATGACAGGAGTATGTATCCAACTGTGAAGTGGAAGGGGCAAAATG
AGTAGACCGTACAATCATGTTCATAGTATCTACAGAGGTTTTAACAGGCA
GAGGTTACTGTAGAGTCTCGAGGATAATAAGGTTAGAGGATGAGGGGACA
AAGAGGACGGGAGCCCCTATTTGCAACACCGTGTTGCAACACTTCTCGTG
CAACATGGTCGACGCCATCAGAACCACCCCACATGAAACCCTTTTTTGAA
GTCTTGTCGTTTTCGGCTGTGTTTGGTACAGGCTGCTGTTGTCAACTTGT
TTGTTTTGAATTTGGCGTGCTTCATTTCCGTTTGCCCCTGTATACCCGAA
ACGGGCAGGTTGGAGAACACGTACTCTTGTTGTGGTTTTTGGCTTGGTCC
TGGCTGGCTGCTGTTGTCAACTTCTTTGTTTTGAATTTACTCGAAACGGG
CAGATTGTAGAACACGTGCGTACAGAGAAGAAACAAAAAAGACCTTGCCC
CGCCGTCCAGGGCACGTGGCTCCACGTGGGGCCTTTTCTTGCAGGTGTGC
TAACACATCGAATCTCAACGCAACTTCTTGAGCTGTATATACCGAGGCTT
TCCCGCTGCACTACTCAGTAGGTCGTCTCCTGCTCCGGGTATCTTTACGT
CGACGAAAGCCTCAAAACGTCAGTCCCGGTGTACACACGCACACACAAAT
ATTATGGAAATATTATGCACACAGATTTGAATGTTGAGACCAACTGGGAA
CATTGGTTGTAGGGACAAAAGCTCGGAAGCTCCACTAGTATAATATCGGG
GAGAAGCCCACCGTTATACTGCCCACTAACATTATCACCATATAGGGACA
CCAAAACAAACTCAGACTAGGTATACAGGATTTTTGGACTAAGAGTTCCG
GACTACGGTGCAGTGTAATATGGAATGAGGTTTGGTGTTTGAAGAAAAAT
CTGAACGCATCTGGACCTTCTGAGCAACATAGAGCAATAGGGGCATGTAG
TCTATAACTGACGAGGAGTGGTGCATTTTGGCTAAGGTGTGGGACACCTT
GTTATTTCGATGATCGTGACTACGGTGATGCACACAGTGGATGGGTGCTT
GTACGTTGAATGTGTATGCATGTGTGTGCACGTGTGTTTAAAGGAAAATC
AGAACGCGCCTAGCGTCTGAGCATCCCCCGGTCAGTTTTTTAAAGAAAGT
TGTATCTGCATTCAAATCTGTGTGCGTGTACACCGGGACTGGTGTTTTGA
GGCTTTCGTCGACGATACTCGGAGCAGGAGACGACCTACTGAGCAGTGCA
GCGGGAAAGCCTCGGTATGTACAGCTCGAAAGGTTGCGTTGAGAATCGCT
GCGTTAGCACACGTGCAAGAAAAGGCCCCACGTGGAGCCACGTGCCCTGG
ACGGCCGGGCAAGGTCTTTTTTGTTTCTTCTCTGTACGTCGTACGTGTTC
TACAATCTGCCCGTTTCGGGTATTGTCATTATTAACGACACATTAGCCCG
ATCTCTCGAACCCGTGGTCACAGAGTGCAAGGAGCATACCATCCATACCC
AAACGCAAATCGTGGCTAGCAGAAAGCCAAAAGAAATAAAACACGCACAC
GAAGGCGAGGCAAACTTCACCACAGAATCAGCACAAAAGCCCCATCGAAC
TACAGCAATGTTCACCCACCACGGAAAAATATCCGGCGCACAACGCCCGA
TTACCTACCACAGACACGCTGCTACTGATGCTGTCGCAGGGCGACACGCA
AAAGATGACAAGCATACGCCAATAATGTGGTAACGAAGTGTCATATGCTA
AACCCCCGTTGGCCAAGTTTACTATACTGTCTGAAGTGCTGCTCAAAAGA
CCCTCTCGGCAAACAACGTGGCGGAGACGATGGCACAAAACAAAAGTATA
GGAAGATAAAAAATATATATACTTAGAGAAGTTGAGCCGGGGTTCGAGAG
AGCGGGCGGAAAGCGGGCGGCTTCTCTACCTCAATCAAGTCAAAGTCACG
TCTAGCAACACAACAGACAGGGCATGTCATTGCCTACACACGACCATGCG
CTATCGGCATAAGACATAATTTGTCCAGAGTGTCCTACATCAGCCATGAA
AACATGGGAAACCATCTGCAATATTGAAATGAACAACAAACTTTACATAA
TTTTCAGTAGAAAGATGATCCTCCGCTCGTCGATGATGCCCTCCTTGCTC
TGCTCTCTTCGCTCTTCCTTTCGCGGGGCCGGCTCCAGGCGCTACCGTCC
ATCCTCGCCTGCGTCCATGGTCCCACGTATCCTCTCGTCTTTGTTCCTAG
TCCTTTGCCCCTCTGCTTCTTCGTGCGATATACCTCCTCCTTCGTCATGC
ACCCTGGTTCTGGTCTTTGTTTTTTCACGATCGAAGGCTCAACCACACCA
TCCGCCCGTCGACGGCCGCTCCTCCACCCTTGCCGCCGAGTCCAGCCTAC
ACACCGGGTGCACTGAGTATACACCAGCTTTCGACTACAGTGTCATCTGC
CTCCGCGCACGCACCGAATCGCCAAACATGTCTGCGTTTGAAGCGCTGAC
ATGTACTGCTCTCACAGGGGGGATGCGTGCCTAATGAGCACCGCGCTGAC
CCAACTCCACCACCACACCACGGCCAGGGCCGGGGCGGTAGCAAGAAGGA
ATCCTTCGCCTTGAGGGTAAAGGCAAACGGAAATGAAGCACAACATTCAA
AACAAACAAGTTGACAACAGCAGCCAGCCAGGACCAAAGCCAAAAACCAC
AACAAGAGTACGTTTTCTCCAATCTGCCCGTTTCGGGTATACAGGGGCAA
ACGGAAATGGAGCACACCAAATTCAACATAAACAAGTTGACAACAGCAGC
CTGTACCAAACAAAGCCGAAAAGACTTCAAAAAAGGGTTTCTTGTGGGGT
GGTTCTGATGGCGTCGACCATGTTGCACGAGAAGTGTTGCAACACGGTGT
TGCAAATAGGGGCTCCCAAAGAGGACCACCACTCAACAAGTCTTGAACAT
AATGTAATCCAGAAAGTACAAGAGACCGTTATTCACTTGGAAGCAGACGA
AGAGCAGTGGAGGGCCACAACGGAGAATTTTATTATTAGCCATTCTGAAC
TTGCATGGCGATAAAAAATCTTTAAGGCGAGAGCAGGGGAGAGATTGGAA
GATCCTTCATGACCGCAGGCAGGATGGAAACGTTGCAATAGGTGGGATTG
GTGACCTAGCACGTTGAGGCCCATCTGCCGTAACCGAGATACAAACCAAC
AAACAAGAAACTCGCATCCCCCCAGTGAGGAATGAATGATTTTTAATGAA
AAATATGAACCCATCTAAACCTTCTTGTTGCGTCAAAGGAGATGTACACT
AAAATACCTCTACTGCCCCTCTGGAACAACAACCCCCCAATGTCCTGCGC
TCCCCTCTCCACTGTTCCTGGTTGCCGTCTTGCTGGTCTGAGTTATTATA
CATATATCATCATCGTCGTCATCATCATCATCATCATCATCTACTGTATT
AAATCATATACCAAGTAGTATCGATATTGTTTCTACGGCGCTTTCTGTTT
CTGCAACCTGACCCCCTCCTGTTTTCTGTCTCGCCTCTACAACGCTTGGG
CGGGTTCTCGCGCATCATACCCAGTCAGTCTCCCCCACTCCCTACCCTTA
CTCTTCCTCTCGCGGCCCTCGGATCTGATCTGATCCCCCTTATGGCGCAA
CGTGATCGCTCAGGTAAAAAATCTAGCGACTGGGGTTGTTGGTTGGGCCC
GTAAGCGTCACGCCCTCTTCCGCACATTTTCTATGTTATCATGATATGGC
ATACCCGAGCTACAGTATCTTCCTCCCTTCTTTCCTTTCCTCTTCTGCTC
CTGTTCCCGTTCCCGCTGCTGCCCTCGTTTCCGTTCCCGTATGTATGTAT
GTATGGCTATCACTTACAACAGATATAGCGACACCACTCAATAAACTCTT
ATTTTGAGCGAGGCTCGCGGCTCGTTTTCTCTGCAAGTCGAGCGCGATTT
CATAAAAAGCCCATTTCTTAAGTATGCGAAGATTTGCAATCATGATAAGA
GCTAATCTGGTACTGTACAAAACTAATGGTGGATCCTTCTTTTAGCAATG
AGAGGTGCAATGCGAGATAAACACTTCCTGTACTTTTCCTTCATCACTCA
TGTCCACTACCAGGTACATACCTGTTACTGCAGTGGGTGTGGGAAAAGAG
AGGCGGGCATTAATTGGTCCGTGGTGATACCTGAAAAGGCAGCACCCGTT
AGTGGAACTACCTTGCGGACTACTGGCACCGTGCCGGGGGATTCTCGGCA
GTGAACACCATTAGCATGCAATTGCGTGACCTGGTAAACTCGTGACTGAC
CCCGATGGTGGTTGGCGGTTTAAATAAATAAATGGACGCTTCCGCGGAAA
GCGGGAGGAATCCCGTGAGGTAGCACCTGTCTCGCGTGATCAAATTCTCA
GGCGCGAACGGGGACAGGGAAACATTAATTTTCCCTATTTAGCTGACCAC
GAGCAGGATTGGCAAGCATACACGATTGATCCATACTCTGGTCAGCTGAA
GAGTAAAATTTAAAATTTACAGAGAAAAAATTCTATCCCTGGTTCTGAAT
AATGGCACCTAATTTCCAGAGAGATCGGGCTCTCTCGAAACTGGCCTTTG
TGTTACATTGTCAGGCGTTTCCCTATGTCCAGCCCATTTGTAGCTACATA
CTTTTAGCATCTGATCACATCACACGCCTGCTCGAAGTACAGTAGTGCCA
GCAGTTTGAGTGATTCCGAAGTTAAGCAAAGGTAAGTTGTCGGTGATGGA
GGTTGCTGATGGAAACGATGGCTCAACCGGGTGTGATTGCCAATCATGCT
CGTGGTCAGCTGAACAGGGAAAATGAATATTTCCCTGTCCCCATTCGCGC
CTGGGAGTTTGGTCCCGCAAGACGTGTTCGGCAGTCCCGTCCCAAGTCAG
CCTGCTCATCTTCATACTCGGGCTGAATCTGTTGCTTACTTACGGGATTC
CTCCCGCGTTCCGCGGCGGCGTCCATTTAATTATATAAACTGCCATACGC
CATCGGGCCAGTCGCGAGTTTATCGGGTCACGCGATTGCGTACCGATGGC
GTTCACTATCTAGAGCCCCCCGGCACAGGGCCAGTATTCCTCAAGGTAGT
TCCAGTAACGCGTACTGCCATTTTGCAGGTCACCATGGACCAATCAATGT
GCGCCTCTCTTTTCCCACACCCACTATTGGTATGAAGTGGGCATGTTGAT
ACAATACATCTTATCATTTCAATAGTGCATATCGCCCTGAAACGTCCTTG
GGTTGTCCCCCCCACCAAACGACAAACGACACGGTACTGCTGTACAGATA
GTAGGGGTACGGGAGTAGTCTAGTATTGTAGCGCTCGTACTCTGACCCTC
AACAACAGCGCCCCCCTGGCCTTATAGACTATAAAGTATGAGCCCCGTAT
AGAGCCACGTTTCAAGAAGCGCTTTCTACGCTGTTGCAATCAGTCCCCAT
TGCTCCGAAACTCCTGTCACAGGTGCTCTCATCTACTCCGTACCAGTATA
TTATAGTACTGGTATACGGTAGAGCTGCAGCAGTTGTAAGGGCAGTACAC
GTAGCCTATGCACCACGGCTGTAACTAAATAGTGTTGGCATTGTAGTTCA
GGAACCATACCTTAAGCATTGAAATACATCACGTGGAACATAAAAACTGC
GAATCCTACTGTCTGTTAAGCACCTTCAGTATGAGTATCATTCTTTCTTG
CACAACACATAAGTATTCATACACGACGTAGTACCTAATAGTTTTATAAG
TATCCTTGACAAAACGGTGTTTAGGACCTGGTAACCTGAATGTAATGCGC
TTTTTTCCTGCTTGGTAGAATCAAAGTGCTTACTGTAATAAGTACTGTTA
CAACTGGCGTGGTTCTGCAGCAAGACAAAAGCCTTTGGTACAGGATAGAA
GTGATTCGGCCACGCTCTCGAAGCATGTTGAAACAGTGTAGACTGCAGTA
GAAACATGTCATAAACCAGAAGCTGTGACTCTTGCGGCATCGACGCGTGC
GCGATAACTGCTGTACACATGGTGGCAGGACGACAACCCCGACCTCCTGG
CGGAATACACGAACGACGCGCCCCCGCCGGGGAGCGAAAGCGAGGCCGAG
GAAGATAACGGCGAAGAAACGCGGGAGGAGGCCCCTGCTCAGCAGAGCGC
AATGGACGCGGTGAGGCTTGACTGTCACTAATGTGTCACTTTCATGGACC
TTAGGGCAGGGAGAGGCGATTCGTTGCGCTTGGAGTGATTGGTGCATGCT
ATTCGCGGCCTCGAGCCGTCACTATTAAACTTTTAAAATAACACGTGTGT
AAATTGGACTCTGGTGGGAAATTCCTCGCCATACTGTTACGTCACAAACG
GCGCGTGGCCCGGGTGATGCTGAAAAGTACTTGGCCAAACCTTGAACACC
AGGTCCTGAAGTCGATGAAGCGGCGTAAAGCCCAGGAGCTGAGTACCGCT
GAACGTGAGCAAATCGCACAAGAGTTCATTTACAAGATCAACAAGGCCTC
GGAAGACGACGAAAAGGCCGTTAAGGAGGGAAGGCCTGCGCTTAACAAGC
TCAAGATGCTTAAGGTTCGTAACCCGCGGGATAGGTAAAACGTTCCTTAC
TCTGTCTAGTCCGTAGATGGATGTTTGGTTGTTGTAAATAGGGGAAAACA
TATGCCCGCGTAATGATAAGGTAGCTGTGCTTATCCCCCTTGAAAAAAAC
TCTTCTCTCGTGGCAGCTGCCCTAGTTTCTATCCCATCATATTAGTGACT
GCTAACCTGTAGGGGCCCTCCCATTGGTTTCAGGTGGTCAAGGCAACTTT
AGCCAAGAAGGAGTTGCAAGAAACGTTCCTGGAGTTCGACTTGCTCGGCG
TTATCGCGCGCTGGCTCCAGGTAACAGCCTCGCCCAAAACTGCGTGTACC
GTTTCCTGCAATGTAAGACACGAAAAAATCTGCATGCCAGGCGTCCTTCG
TGACCCAAAAGGGTGAGGGATCGGGATGTTTCCTTGCCCTCTAATCCTTC
ATGACTTGTCGTGGAGAGTTGTTCATCGTCACCGAGAGCCGAGAGGGATT
TCCGGGAGTCGGTGAAATTCGGAAGGCGGGAAGCACCCACCAACGAAAGA
GTGACGAGGGGGCAGAGACGAAACAAGGCGTAGTGTAGTGTAGTGTAGTG
TAGACAAGGATTTGGGCTATTACCGTAAGTATGGGGAGTCTTGGCACACC
CCCTAGACTGACTTTCCAGGCTCGATTGCTCCACAACCAAGAGGATGTGA
ACATCGACCGATACGTCTAAAGAAAGCTCTCGACGAGATCTTTCGAAAAA
CGCCCTTTTCAGCATCGGCACCCTCTTGGTTGTAGAGCAATCGAGCCTGG
AAAGTCAGTCTAGGGGGTGTGGCAAGACTCCGATACTTACGGTACTCACG
ATTCGTTTACCAAGAAAAGAGAGGGCTAGCCTCTCCACATTAGTTCGCGT
CAGCGCTCAGACGTTCCGCCCTCTGTCCTCGTCCCCCCGCCGCTGGCTGT
CGTCGATCTGGGTATGCTCTGCACAGCCGTACAAGAACGGCAGGATTCCT
AACCTCACGATTCGGAAAGAGATGCTGGCCCTCTTGTTAATGTTGCCAGT
CCAAGTCGATCATCTCAAGAGGAGTGGCATCGGGAAGATTGTGATGGGCT
TGTTCAACTCCAAAGAGGTGGGCCGGCTTTGCTCAAAAGTCGACACGTAG
CGAGAATGGCACATGCCCCTTTGCGGAGTTGAAATGTTCGGTTCGAATCT
CGTGGGTAAGTGTATATTTGACCCTTCGCGAAGTACATAGGAGCTTCCTC
TCGCGGTCTTGGAGACGAGCCTCCGGTACGCATCGACCCGCGCGTTTCCC
GCCTCTTTTTCTCGTGTCACAGGAAACGCGGGAGAACAAAAGCGTTATTC
GAGAGCTGGTGAGTAAGTGGAACCGACCCGTGTACGGACAGGACGCGAGC
TATCGGGCCATGAGGTCCATGAAAGAAGAACCAGAAGCGATTGAGGTGAC
GTCATCGGGAAGCACGAGCCATAGCGTCAGGCGACGAGCGTCGTGGGGCC
ACCTCAAGCGCGAGGATCCGAGCCGGGACGAGGCTGTTGGGAACATCCTC
AACGCCAAAGCGAGGTGATGATTTCGACGAAGCCAGAGTATGAAGTGATG
TCCGGCAGTGGCTGGCAAAAGCGGTGATGTGAAAGCGCCCTTGGATCACG
CCCACCCTTGACGTAAGTATACGTGTATCTTTTGCATGCTGTTGATTATA
TTGGTGCGAATCGCCCGTGAATACTTTTCAGTATTATAGTAAGTTTCGAG
AGCGGTTGGATCTGGAGTTAGACGGATCAAAGCGGGCTTCTGTTGACGTC
TGTGTCGTTTTATTCTTGAGCCGTTAGTCTTCAATGTCGAGTTTTGCGGA
CACATCCTCTTTTATTGAAAATTGTTTTATTGTTGACAGTATCTACCAGC
CTCCAACCTTGTTATGCGTCTTCTCCATATCCACGAACGTCGCTTGCATC
TAACGTAAAGGGGACTCGATCCTGCCGGAACGCGCGTGCCCTACTCGAAG
GGGTATGCTTTCGCGAAGGCTCCGAGGTCAAGGGTTGAGAGTCACGGCCG
CCAACCGAATCAGCAGGTGTGTGTCCTCCCCGACGCTAGTTTCTGGACTA
CGTGCCCGGGTTCGTTTTCGTTTTTGAGAGCTTCATCGCTTTTTCAGGAA
ACCCCCCCCCCAAAAAAACAGTTTAAACGCTACAAGAAAGGCACGGATGA
TATCACCACTCGTGAGCGACTGCCTACTTTCTTACAAACATCTCCGTTTG
TTTGTTGAACGCCTACTCCATCCCCACCGCCTATCGAAGGTGGACACGTC
TGCTCGTTCGAAACTGCTCAAGAAGATGGCCAACCTTTCGCGTCCCGTCA
AGAAGGGCGCGTGACGGGGAAAGTGCAAGTACGCGCTCAGCGCGGAAGTC
AAGGGGGGTCCAAATTTGTTCGGAGCGTCTGTGTTGCGGTGGTGGAATGT
GGACATGGAATGCGCCGGTTTCATTTCAGCCCGATGAGTCTGGGAATAAG
ACTTCTGCGTCCGCCAAGCGGAGTTGCTTTTCCGACCCGTGTTCTCAACC
TTGGGCTTGTTGTAACGGCAGAAGTCGCTTTTGTAATGTTATCAGTATAT
TCTTTTGTGTTCTGGTATGGTAGGCAAACACAGAGATAATTGTACGCGAC
GCGAGGACCAGTTTTACGCACGAATCAGGGGAGAGAGAGCCTCAAGTTTC
CGCAGCGGCGTGTTGCCGTCGGCCTCTGCAAGATCTGTTCAAGTGCACTT
CCTGTCGTTCGGTTTTTACTGGTACAGCTAGGTCACGTAAAGCAGAGCGA
GAGGTGAACTGTACTCAGCGCGCAAAGCACATTATAGGTGAATAAATTTT
GAGTCGTTCATCCACAAGCAAGTTTTTCACCTCAGCGTATTTTTCGCGTC
CTGCCGCCTCCTCTCGCTTGGCGAAACGCTTAGCGCTGTCCTGTTCTCTG
TAGTCTCGCCTTTGTTGTCCTTCCTGCGCACAAGAGTTGCCATAAAAGTA
CTCCATAGAGCGTTACGCTATACTTGCAGTGCTGTGCTACCCTGAGAACG
GCCTTCATGCAGGGCAAGCAAGAGGACAGACACTCGCGCCTGCGGTACCG
TACCCTTGCGTGATAGGACACTGTACCCCTTGCTAGATAAGATGCGCGCG
GGTGTACTCGTCGAGATAACGCGACAAATCGCTGACGCTAGAAGCTTTCC
ACGGTGGTAAGCGATCGTTTCAATCTCGCGGGGTTCAGTTGTCGTAACCG
TAGGCGTGGCTTTGACCACAATTCCAAGTTGAAGCGCTCCACCTTAATAC
TGCCGAATCCCAGCTTCTTTCTTCCATCGCCTCGCTCCCTTGGACATCTT
CCCTTCATATTTCCCAACATTCCCCAGCATCACCTCATATGTTGGACCGC
CCCGACGCTGTGATTCGACAGTTACCGTGGTGGTCTTGGAAATTGTCGCG
CCCTTTGCCCTCCTTCGTCTCCCGGATGCTGTCGGGGGCTGGAGAAAAGG
GCTGGCGTCGGCGTGAATCCGCCATGATGAGAAGGTGGAGCACGCGCATC
TGGAAAGCCCAGGTGTAAGGCAAGGAGCTGACTGCGAGCAATGCACTCTG
GATGCCAAATAGTTAGCTTGGTGGGGGAGTGATAAGAAAATGAGATGAAA
TCCTTGCCGTCCTAGCAAACCCGGACCAAATCGGCATCGGAAAATAGTTC
AGAACAAGTCTCGAGCACAGCACCTGGTGAGAAATAATTTCACGCCCAGC
GGTGCCTTCTCGGTCATTGCTACACCGGCTCTCGTTGCCTGATCTTCCCC
TTTCAGCTTGACGGCGGAAAAGAGACCTTTTCTCGTACTGTGCTACAAAT
CATAGTCCCAAGTCATGGAAGATACCGGGGGACAAACGCGCCCGTCTCCA
TATCT back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1065:188962..200766+ >mRNA_A-nodosum_M_contig1065.36.2 ID=mRNA_A-nodosum_M_contig1065.36.2|Name=mRNA_A-nodosum_M_contig1065.36.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1875bp|location=Sequence derived from alignment at A-nodosum_M_contig1065:188962..200766+ (Ascophyllum nodosum dioecious)
ATGTCTGAAATTGACGACATGTTCGGTTCCGACTCATCCGGAGATGAAAG
GCAAGCCAAAGAGACGGTGCCCGACGACGATGGCGATCTCTTCGGGAGTG
ACTCGGACTCTGCGTTGAACGACCCAACCCCGCAAGGCACAAATGCCGAC
GTTGACTCAAGTTCCCTAGTCAATGCCGACGTTGACTCAAGTCCCCAAGT
CAATGCCGGCGATGACGGGGAGGCTGATGTCGACCCTTTCGCGGATAGCG
ACGACGAGGCCGGCGCTGGTGCTAATAGTGGTAAAAGTCTAGGGCGGTTG
CGGAAGGGAGGTGGGGTGGACGAAGGGACAGGGAAGAAAAGCGAACTGGC
GGTTGAGGGCAAAGGATCAAAGGGCAAAAAGAAAAAAAAGGATAAGCTCA
AGAAGAAAAAGGGCAAGAAGCGGAAACGGCTCTCCGCAGTCACCGACGGC
GGGGAAGAAGAGCAGCAGACGCAGACAGTTAAGAAGAAGAAGAAGAAGAA
GAAGAAGGAAACTGAGAAGGGGGTTGACCGGGAGAACGCGCAGCAGCTGG
AGGATCTGGGCTTGCTTTCATCGGGGGATGATCATGAGGAGGAGGATGAG
GAGGAGGAAGAAGCCGATCTCGAGCCCGTGGAGCCTGTGCGAGAAGAGGA
GGCGGAAGCGGGAGATAAAGAGATCCGCACGCAAGACGACGCCGACTTCA
TCGATGACACGGACGACAACCCCGACCTCCTGGCGGAATACACGAACGAC
GCGCCCCCGCCGGGGAGCGAAAGCGAGGCCGAGGAAGATAACGGCGAAGA
AACGCGGGAGGAGGCCCCTGCTCAGCAGAGCGCAATGGACGCGGTCCTGA
AGTCGATGAAGCGGCGTAAAGCCCAGGAGCTGAGTACCGCTGAACGTGAG
CAAATCGCACAAGAGTTCATTTACAAGATCAACAAGGCCTCGGAAGACGA
CGAAAAGGCCGTTAAGGAGGGAAGGCCTGCGCTTAACAAGCTCAAGATGC
TTAAGGTGGTCAAGGCAACTTTAGCCAAGAAGGAGTTGCAAGAAACGTTC
CTGGAGTTCGACTTGCTCGGCGTTATCGCGCGCTGGCTCCAGCCGTACAA
GAACGGCAGGATTCCTAACCTCACGATTCGGAAAGAGATGCTGGCCCTCT
TGTTAATGTTGCCAGTCCAAGTCGATCATCTCAAGAGGAGTGGCATCGGG
AAGATTGTGATGGGCTTGTTCAACTCCAAAGAGGAAACGCGGGAGAACAA
AAGCGTTATTCGAGAGCTGGTGAGTAAGTGGAACCGACCCGTGTACGGAC
AGGACGCGAGCTATCGGGCCATGAGGTCCATGAAAGAAGAACCAGAAGCG
ATTGAGGTGACGTCATCGGGAAGCACGAGCCATAGCGTCAGGCGACGAGC
GTCGTGGGGCCACCTCAAGCGCGAGGATCCGAGCCGGGACGAGGCTGTTG
GGAACATCCTCAACGCCAAAGCGAGGGGTATGCTTTCGCGAAGGCTCCGA
GGTCAAGGGTTGAGAGTCACGGCCGCCAACCGAATCAGCAGGTGGACACG
TCTGCTCGTTCGAAACTGCTCAAGAAGATGGCCAACCTTTCGCGTCCCGT
CAAGAAGGGCGCGTGACGGGGAAAGTGCAAGTACGCGCTCAGCGCGGAAG
TCAAGGGGGGTCCAAATTTGTTCGGAGCGTCTGTGTTGCGGTGGTGGAAT
GTGGACATGGAATGCGCCGGTTTCATTTCAGCCCGATGAGTCTGGGAATA
AGACTTCTGCGTCCGCCAAGCGGAGTTGCTTTTCCGACCCGTGTTCTCAA
CCTTGGGCTTGTTGTAACGGCAGAAGTCGCTTTTGTAATGTTATCAGTAT
ATTCTTTTGTGTTCTGGTATGGTAG back to top
|