mRNA_A-nodosum_M_contig1064.13.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: A0A6H5JHA5_9PHAE (BPL/LPL catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA5_9PHAE) HSP 1 Score: 410 bits (1055), Expect = 2.020e-133 Identity = 243/421 (57.72%), Postives = 281/421 (66.75%), Query Frame = 3
Query: 318 ALSFLPPAVAPQRATGAVVVTRPLSVETKRLESTPRPII---------------ERDKCRPAVRSPPLRLSLSKPSSSK-----SASSK-PGRSTARPTAGASGTGGETLEMGCGGVEG-GMTSTLTWMESVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLQQRPTPAAPGGREPAQPGVVLPQ-------------------------------------PRVSLKWPNDVLLDGDKVAGVLIEAELPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQAVRALSATLTDKLCSWASGKDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1403
ALS L PAVAP+ T A+ V + L +TP + ER +CRP VR+ PLR +++KPS ++ SA+ + PG S++ G++ +T EM CGG GM S TW+ESVNSTMDE KTL++ Q+GS A VF VAAREQL+GRGTKGRAW+GLPGNVFLTVAIPL+RVPVPLSLIPLRVGTLIAPEIQR L P R+ +P + P PRVSLKWPNDVLL G KVAGVLIEAELPFLLVGIGVNVRNKP+V Q GPDRGRPA CLA++G DSTD+AVR LSA LT+KLCSWASG DSA A+AEWSRWVDW+LPL+IRDEGR VRPVGVAPDG LRV+DP TG EELL TEYLL
Sbjct: 153 ALSSLAPAVAPRAGTSALFVVSSVDPAVS-LATTPEATLAGSAAAGAEGSVVAAERARCRPLVRTTPLRFNVAKPSRTEIFLAPSANIRTPGPSSSSADTGSA----DTTEMRCGGXXXXGMISRFTWLESVNSTMDEVKTLIINQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRL--------PRHRQEERPPLYPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPEVPQNGPDRGRPATCLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPVGVAPDGRLRVMDPATGEEELLATEYLL 560
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: D7FRR2_ECTSI (BPL/LPL catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR2_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 4.950e-129 Identity = 206/288 (71.53%), Postives = 225/288 (78.12%), Query Frame = 3
Query: 615 MTSTLTWMESVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTL-----QQRPTPAAPGGR----------EPAQPGVVLPQ----------PRVSLKWPNDVLLDGDKVAGVLIEAELPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQAVRALSATLTDKLCSWASGKDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1403
M S TW+ESVNSTMDE KTL+V Q+GS A VF VAAREQL+GRGTKGRAW+GLPGNVFLTVAIPL+RVPVPLSLIPLRVGTLIAPEIQR L ++RP + P E A+ PRVSLKWPNDVLL G KVAGVLIEAELPFLLVGIGVNVRNKP+V Q GPDRGRPAACLA++G DSTD+AVR LSA LT+KLCSWASG DSA A+AEWSRWVDW+LPL+IRDEGR VRP+GVAPDG LRVVDP TG EELLTTEYLL
Sbjct: 14 MVSRFTWLESVNSTMDEVKTLIVNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIPLDRVPVPLSLIPLRVGTLIAPEIQRRLPRHRQEERPPLSPPXXXXXXXREARTAEAAEXXXXXXXXXXXXXXXXXPRVSLKWPNDVLLGGSKVAGVLIEAELPFLLVGIGVNVRNKPEVPQNGPDRGRPAACLADFGADSTDEAVRELSAALTEKLCSWASGTDSASTAVAEWSRWVDWSLPLEIRDEGRAVRPIGVAPDGRLRVVDPATGEEELLTTEYLL 301
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: F0Y9I2_AURAN (Uncharacterized protein BPL2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I2_AURAN) HSP 1 Score: 186 bits (473), Expect = 5.720e-51 Identity = 116/263 (44.11%), Postives = 146/263 (55.51%), Query Frame = 3
Query: 633 WMESVNSTMDEAKTLVVKQQGSGANGVFG----VAAREQLKGRGTKGRAWVGLP-GNVFLTVAIPLERVPV-PLSLIPLRVGTLIAPEIQRTLQQRPTPAAPGGREPAQPGVVLPQPRVSLKWPNDVLLDGDKVAGVLIEAELPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQAVRALSATLTDKLCSWASGKDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1403
W+ ST D AK ++ ++ +NG G VA Q GRGT+GR W GNV LTVA+ + +P+ P++L+PLRVG +A + L+ P A VSLKWPNDVLL+G KV GVLIEA+ LLVG+G+NV PDV Q GP+RGR A LA G S D A++ L L +WA G D A +A WS +VDW+LPL +RD VV PV + PDG LRV G E L EYLL
Sbjct: 33 WLRETKSTQDAAKQILKQRVVGNSNGHDGKHVAVATAHQTAGRGTRGRTWNDDGRGNVALTVALDMRHLPLKPVTLVPLRVGVEVARVLADHLEDAPGCA------------------VSLKWPNDVLLNGKKVCGVLIEADGDALLVGVGINVATHPDVPQAGPERGREATSLAACGATSAD--AEAIAKDLAAHLSTWADGVDDAPTLVAHWSHFVDWSLPLTLRDTSEVVSPVRLLPDGRLRVRPAAGGPERDLVAEYLL 275
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: A0A7S1ZSF1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZSF1_TRICV) HSP 1 Score: 182 bits (461), Expect = 2.570e-49 Identity = 113/283 (39.93%), Postives = 168/283 (59.36%), Query Frame = 3
Query: 609 GGMTSTLT--WMESVNSTMDEAKTLVVK--QQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERV-PVPLSLIPLRVGTLIAPEIQRTLQQRPTPAAPGGREPAQPGVVLPQPRVSLKWPNDVLLDGDKVAGVLIEAEL------PFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYG----GDSTDQAVRALSATLTDKLCSWASGKD-SAELALAEWSRWVDWTLPLQIRD--EGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1403
GG TS + ++ +V ST DEAK ++ + +G + F V+A EQ GRGTKGR W+G PGN F+T+ +P + + P+P++L+PL++GT++A I R + V + RV +KWPNDVL++ KVAG LIE+ + L+GIGVNV + P ++Q GP RGR A CL+E+G GD T+ + R L+A L +++ +WA+ D +AE + EW W D+ +RD E VV P+ + PDG L+V D G+ +LL T+YLL
Sbjct: 5 GGRTSLVPIHYLGTVGSTQDEAKRILQEYANKGDDSPDCFAVSANEQNHGRGTKGRDWIGRPGNCFVTICLPCDLITPLPVTLLPLKIGTIVATHIDRAFRS----------------VGVHGARVRVKWPNDVLINDGKVAGALIESHCNPETLRSWYLIGIGVNVAHAPTIYQFGPQRGRQATCLSEHGSFVKGDGTNDS-RTLAADLAEEVHAWATEGDMTAEGVVREWEAWADFGREQVLRDKPENEVVVPLAIEPDGRLKVRGAD-GKIQLLCTDYLL 269
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: A0A7S1GL90_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GL90_CYCTE) HSP 1 Score: 181 bits (459), Expect = 1.530e-48 Identity = 104/263 (39.54%), Postives = 146/263 (55.51%), Query Frame = 3
Query: 636 MESVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLQQRPTPAAPGGREPAQPGVVLPQPRVSLKWPNDVLLDGDKVAGVLIEAEL----PFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDST---DQAVRALSATLTDKLCSWASGKD-SAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYL 1400
++ ST D AKTL+ ++ G+ + ++ V Q GRGT GR W+ GNVFLT+A+P+ +PVP++L+PL++G L+A + + Q G E QP V KWPNDVL + +K+AG+LIE+ + +LLVGIGVN+ P V +GPD+GRPA CL Y + S L W D SAE +EW RW +W PLQIR+ G V P+ + DG LRV + +G+E LL +YL
Sbjct: 57 VQEAESTQDLAKTLI-ERGGAEDDHLWVVTTDNQTHGRGTTGRTWISRKGNVFLTIAVPMTSIPVPITLLPLQMGVLVAERLDKIYHQLKPDDEEDGSERLQPTV---------KWPNDVLFNDEKIAGILIESHVVENVTWLLVGIGVNLLQTPQVPTEGPDKGRPATCLQHYVSHDVLLPESLAEVFSHDLAVAFEQWLDDSDVSAEQVRSEWKRWANWAKPLQIRETGEAVFPMDIEADGRLRVKEM-SGKERLLVADYL 308
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: W7TWD4_9STRA (Biotin lipoate protein ligase-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWD4_9STRA) HSP 1 Score: 176 bits (445), Expect = 5.070e-46 Identity = 119/269 (44.24%), Postives = 153/269 (56.88%), Query Frame = 3
Query: 633 WMESVNSTMDEAKTLVV--KQQGSGANGVFGVA--AREQLKGRGTKGRAWVGLPGNVFLTVAIP---LERVPVPLSLIPLRVGTLIAPEIQRTLQQRPTPAAPGGREPAQPGVVLPQPRVSLKWPNDVLLDGDKVAGVLIEAE--LPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYG--GDSTDQAVRALSATLTDKLCSWASG--KDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYL 1400
W+ V ST D +TL+ ++ GV +A A Q++GRGT GRAW+G GN+FLTVA+P L + P++L+PLR+GTLIA EI R L P P A Q RV LKWPNDVLLD KV+G+LIE + + LVGIGVNV P V G DRGR AACLA+ G G D A R LS + + +W G +D+A+ +A+W + W +RD G VV P+ + DG LRV D +G LLT EYL
Sbjct: 105 WVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRIL---PHPEA--------------QARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTA-RDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLRDGGAVV-PLALETDGRLRVRDLTSGATRLLTAEYL 354
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: A0A7S0GLW3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLW3_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.230e-45 Identity = 106/268 (39.55%), Postives = 149/268 (55.60%), Query Frame = 3
Query: 714 FGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLQQRPTPAAPGGREPAQPGVVLPQPRVSLKWPNDVLLDGDKVAGVLIEAELP-----FLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEY------GGDSTDQAV-------------RALSATLTDKLCSW-----------ASGKDS-AELALAEWSRWVDWTLPLQIRD--EGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1403
F ++ EQ KGRGT GR W+ GN FLTVAIP++ VPVPL+L+PL+VG++IA +++ L + G + A VS+KWPNDVL+DG K+AGVLIE+ + ++G+GVNV P V G +RGR + C+ ++ GGDS + V AL+ + +CSW ++ KD+ A++ L EW WVDW L +RD + ++ P+GV PDG LRV D GRE LL +YLL
Sbjct: 11 FAISTSEQKKGRGTSGRVWISSKGNSFLTVAIPMDSVPVPLTLLPLKVGSIIATQVKELL------ISCGASDAAN--------NVSVKWPNDVLVDGGKIAGVLIESATDQTYQTWFMIGVGVNVAVAPAVDTAGENRGRRSTCVKDHCLKCNSGGDSFENNVDKDHSFGDGMEEATALANNIARDICSWIYYADEISEQGSNNKDANAKILLNEWREWVDWEKELVVRDSTDNEIIVPLGVEPDGQLRVRGQD-GRERLLMVDYLL 263
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: A0A8J2WZ73_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ73_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.870e-44 Identity = 104/258 (40.31%), Postives = 144/258 (55.81%), Query Frame = 3
Query: 633 WMESVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLP-GNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLQQRPTPAAPGGREPAQPGVVLPQPRVSLKWPNDVLLDGDKVAGVLIEAELPFLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQAVRALSATLTDKLCSWASGKDSAELALAEWSRWVDWTLPLQIRDEGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1403
W+E+ STMD AK L+ K++G VA Q KGRGT+GR+W GNV LTVA P E P++L+PLRVGT++ L R+SLKWPNDVLL+G KVAG+L+E++ + VG+GVNV + P V GPDRGR AA + GD+ A++ ++ D L +W+ +D A + +WS VDW L++R+ G +V+PV + PDG L+V G E L +YLL
Sbjct: 36 WLETTPSTMDAAKDLL-KERGDTDARPLAVATAHQTKGRGTRGRSWTDDGRGNVALTVAFPSEIPLAPITLLPLRVGTVVID-------------------------ALNDSRLSLKWPNDVLLEGGKVAGILVESDGNAIYVGVGVNVASAPAVPSAGPDRGRRAAKIP---GDAF-----AIAQSIADGLGAWSQDRDDATSVITDWSARVDWAADLELRETGELVKPVRLLPDGRLKV--RGAGGERALVADYLL 257
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: A0A7S2U6B7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6B7_9STRA) HSP 1 Score: 169 bits (429), Expect = 9.830e-44 Identity = 104/265 (39.25%), Postives = 150/265 (56.60%), Query Frame = 3
Query: 651 STMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPV-PLSLIPLRVGTLIAPEIQRTLQQRPTPAAPGGREPAQPGVVLPQPRVSLKWPNDVLLDGDKVAGVLIEAELP----FLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTD----QAVRALSATLTDKLCSWASGK----DSAELALAEWSRWVDWTLPLQIRDEG--RVVRPVGVAPDGCLRVVDPDTGREELLTTEYL 1400
ST DEA+ L++ + S A+ F V A EQ +GRGT GR+W+G GNVFLTV I E VP+ P++L+PL++G L+A I +Q G + G V++KWPNDVL+DG KVAG+LIE + + LVGIG+NV P + QGP+ GRP+AC+ +Y G S + AL+ + + + +W +++ + EW W + L +RD+ V P+G+ PDG LRV D + GRE L +YL
Sbjct: 105 STQDEARRLIMDELSS-AHDNFAVLATEQTRGRGTCGRSWIGRKGNVFLTVGIKSEEVPIHPITLVPLKMGVLVARAIHDRIQN-------SGNSSSGKGTCA----VTVKWPNDVLVDGKKVAGILIENFIHDNQVWFLVGIGINVAEAPAIDSQGPEGGRPSACILDYCGSSATINATEECNALATQIANSVHTWVQNSTGQYETSRDVVKEWEEWAELGKELFLRDDASREPVIPLGIEPDGRLRVRDRN-GRERFLVADYL 356
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Match: A0A7S1BNJ6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNJ6_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.500e-41 Identity = 101/268 (37.69%), Postives = 150/268 (55.97%), Query Frame = 3
Query: 642 SVNSTMDEAKTLVVKQQGSGANGVFGVAAREQLKGRGTKGRAWVGLPGNVFLTVAIPLERVPVPLSLIPLRVGTLIAPEIQRTLQQRPTPAAPGGREPAQPGVVLPQPRVSLKWPNDVLLDGDKVAGVLIEAELP------FLLVGIGVNVRNKPDVHQQGPDRGRPAACLAEYGGDSTDQ-AVRALSATLTDKLCSW---ASGKDSAELA--LAEWSRWVDWTLPLQIRD--EGRVVRPVGVAPDGCLRVVDPDTGREELLTTEYLL 1403
+V+ST DE + LV + + A G V A Q GRGT GR W+G GN+FLTVA+P+ VPV +L+PL+VG ++A ++R L + + + +V+LKWPNDVL+D K+AGVLIE E + L+GIGVNV + P++ G +RGRPA CL ++ D+ ++ ++ + +W + AE A L EW + ++ PL+IRD +V P+ + DG LRV+ D G+E LL +YLL
Sbjct: 108 AVDSTQDECRALV-RSRAPDAVGAVAVTATRQTGGRGTNGRKWIGRSGNLFLTVAVPINAVPVTPTLLPLKVGVIVASNVRRVLLE---------------SSLNERSKVTLKWPNDVLIDDKKIAGVLIENEYQKNYNDGWFLIGIGVNVASAPEIPNVGEERGRPATCLGDHMEGGLDEGSLLRFGESIAGDISTWIFKTVDEKEAESAKILEEWRGFANFGKPLKIRDGPSNEMVIPLDIESDGRLRVLG-DNGKERLLAADYLL 358 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1064.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1064.13.1 >prot_A-nodosum_M_contig1064.13.1 ID=prot_A-nodosum_M_contig1064.13.1|Name=mRNA_A-nodosum_M_contig1064.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=466bp MAVACFRITLVASIFIFLAECVKTSSTDPIIVIPTTYEVTNTNETSVTLSback to top mRNA from alignment at A-nodosum_M_contig1064:127038..136294+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1064.13.1 ID=mRNA_A-nodosum_M_contig1064.13.1|Name=mRNA_A-nodosum_M_contig1064.13.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9257bp|location=Sequence derived from alignment at A-nodosum_M_contig1064:127038..136294+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1064:127038..136294+ >mRNA_A-nodosum_M_contig1064.13.1 ID=mRNA_A-nodosum_M_contig1064.13.1|Name=mRNA_A-nodosum_M_contig1064.13.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1398bp|location=Sequence derived from alignment at A-nodosum_M_contig1064:127038..136294+ (Ascophyllum nodosum dioecious)back to top |