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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 871 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Cds size | 762 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866446.2743962-UTR-A-nodosum_M_contig1060:100920..101026 | 1680866446.2743962-UTR-A-nodosum_M_contig1060:100920..101026 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1060 100921..101026 + |
| 1680866446.3371515-UTR-A-nodosum_M_contig1060:109382..109385 | 1680866446.3371515-UTR-A-nodosum_M_contig1060:109382..109385 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1060 109383..109385 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866446.2866325-CDS-A-nodosum_M_contig1060:101026..101086 | 1680866446.2866325-CDS-A-nodosum_M_contig1060:101026..101086 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1060 101027..101086 + |
| 1680866446.3001962-CDS-A-nodosum_M_contig1060:104727..104800 | 1680866446.3001962-CDS-A-nodosum_M_contig1060:104727..104800 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1060 104728..104800 + |
| 1680866446.3093772-CDS-A-nodosum_M_contig1060:108093..108229 | 1680866446.3093772-CDS-A-nodosum_M_contig1060:108093..108229 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1060 108094..108229 + |
| 1680866446.320015-CDS-A-nodosum_M_contig1060:108523..108830 | 1680866446.320015-CDS-A-nodosum_M_contig1060:108523..108830 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1060 108524..108830 + |
| 1680866446.3295288-CDS-A-nodosum_M_contig1060:109196..109382 | 1680866446.3295288-CDS-A-nodosum_M_contig1060:109196..109382 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1060 109197..109382 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1060.2.1 >prot_A-nodosum_M_contig1060.2.1 ID=prot_A-nodosum_M_contig1060.2.1|Name=mRNA_A-nodosum_M_contig1060.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=254bp
MGMAGGCCAESTEASSEVTQVQDLAWAAIIFHVLALAAAGFLNWAQWAAA AVVIPCSLGVLCRFRKGAYTAAVVGYAIGGFFDLVAVAFWIIFYFAVKEP LDDVWDNFFEQNYNSTIVVEDEHDFEDWTEVIGWPALDAIVDWLEVTSDV VLWFAIFPALAALVVLEGYRSAFVAIKKWQDSGAPDARQEVQDLSPTPIT TTKEVFQTTANFVKEKEKEKEEVEQKSSAYTDAVEEGQQARGGQDLDQND VGQ* back to topmRNA from alignment at A-nodosum_M_contig1060:100921..109385+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1060.2.1 ID=mRNA_A-nodosum_M_contig1060.2.1|Name=mRNA_A-nodosum_M_contig1060.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8465bp|location=Sequence derived from alignment at A-nodosum_M_contig1060:100921..109385+ (Ascophyllum nodosum dioecious) CAACAGTACCTAGGTCCCGCCTGCTACTGTAACAGTACTTGACTTGGTGA
AGCTATTATTGTTTTGGGCATACTGGACAGTCTGCTGGTCGGAGTACAAG
TATAATATGGGGATGGCTGGAGGATGTTGCGCGGAGTCAACGGAGGCTTC
GTCTGAAGTCACGCAGGTAAGATAACTTCGTCCCCACCCAGTATACTACT
GAATGTACACTATCGGTATCGGTCGTTCGAGAGGTTCATTTGCGCCAACC
CCCAACGTCACGATAAAAGCCCGATGATTGGACGGAGCGGCAGTCCTATA
GTCGCGTACAGTATTATATTATAATTCATAAGAATATATTCAATATTCAA
TGTAAAATGTAATTGTTTAAAGAATCCTGCAGGAGGGCGGTAAATCGTGT
GTTCTTCTCCGCTTTAAAAAAACTGGTTGCTCAACCCAACCCGCCGCTCA
ACGGCTGCTCTGGCTGGGTGCAATCCCACAACACAGGCGACCGAGTATTT
TTTTTCGATGTAGGCCTTCGAATTCAATGTACACATCTTTGTAGACAAGA
TCCTTACGCTTTTGTCGACGTGATGATTTGACAAAGCTCTCGGTGCTCGT
AGTAAGTAAAGTACACACACACGTGTCACGTGGGAAAGAAAGTGCTGCAG
AGCGCTTTTTCCCGACACAGTCTGGCGTTCTCTATATATTATTAATGATA
AAGAAAGCGGCTCTAGAAACACCATAGCAGCAGTTAGCTTCCCCCTCCAA
CGAGAGAGAGAGCGTGGGAAGTGTGGTGTTGGCAAAAGCCCATCTGAACC
CAACATTCCCCCACCTGCTGATCGCTGGTACTAAGCTTGGTACTGCCGAC
AACTGCTGTCTCCCAGAAGAGTCTATGATTATATACACGGGAACGCCAGT
TCCTCGCTTTCTTTCTTGCATGGCAACAATCGAGTCTCTCAACATAGATA
GGGCCGACCAATTATAACGGCGTGCCTTCTTAACAAAGAAAAAAATATAT
GTTTCCCTCCGCGGAATCTATATATCGCAATAACCCCACGCACGGTAGTC
TGATTCCACTAATGAGGCTTGGATGCACTGGTCGATCGTTGAGGGGGGTC
ACCAGGCAGAGAGCTCGTCGCTGACCGGGACCCGGACGCGGTGTGTGCGG
CGAACATTATCATTACAGTAGGATGTTGTTATGCCCGAACAATTTAAGGC
GAAGATTCCAAAACCGAAGAAGTCTAGGTATCTTTTCCTTCTACTATTTA
ATACCAGGTAGTACAGAGGAATATAATATTAGAAATAGTAATATAGTAGC
AATAGTATTAGTATTGGTAGTAATAGTTATATAGTAATAGTAGTAGTAGT
AGTAATATTATTTACAGCAGTAGAGCTACAGTAGTAGACTAGTATTTGTG
TCGTGTTTTTTATCCTTTCGATTCGTAAGTATCCCGCTATGCAGCTCCAT
GCAGCACGTCTTCCTCAGCAGTACAACTAGCTTGGGAGCACAAACAGACG
ACGGCGGTGGCAGTATACAAAGCATATAATGTATGCTGTATACTGTATGT
CCCACTGTATGTCTCATACCGTACAGTACCGTGCAAGAGGTAACCTGGGG
AAGGGGATAATTCCGAGAAAGTTGCTACTGTACGTAGTGTATCAAAAGTA
GGATATCCATGGATGATGATGATGTGGTTCGTCGAACGGATGAAAAAAAA
TACCCCACCCAGTACAACAGAAACTATGCGGCTGTCTTGAAGGCCACCCG
ATGTCCCATATGAATCCCTGCCCTGTAGAGCCAGCCCGTTAGGTGCTGAA
ATCTCAGCTCATCCAAGCTCAGGGATGCTGAATTCGAGTTTGAGTTATGA
ATAGGCGTCGTCCACGGGAGGGGTGAACTGTCAACCTATATTAATAGAAA
AAAGGTCTTAACGGAGAAAAAACAGTTCGGGATAAATATGATGTGCATGA
TGTCTGAATGACCATTATTACCTCCTCTCGCACTCTGAACCATATTGATA
AGTATGTATCGTCGGCACTTTCAGCAAAGTATGGATCGACCGGGTATATT
ATGGTAGTCAATCCTGCTCGTGGCCTGCTGAACAGGGGAAAATATATTTT
TCCAGTCTTCTTTCGCGTCGTCTGAGAATTCGGTCCCGCGAGACAAGTTC
GGCCGTCCCGTCCCGCGTCAGCCCGCTCATTCTCCACACTCGGACTGAAT
CATCAATCATCAATCATAATCATCAATCTGATTGGTTAATGGTGCTTATT
CACGGAATCCCTCCCGCTTTTCGCGACGGCGTCCACATATTTTACCGTCA
ACCGCCATCGGATCAGTCCCGATTTAGTCAGGCCACGTAATCGCGTACCG
AGGGCGTTCACTGCCGAGAGTCCGCGGGCTCGGGGCCAGTAGTCCTCAAG
GTAGTTCGAGTAATAGATGCTGCCTTTTCAGGTATCACCATGAACCAAAT
TTTGCGCGCCTCTATTTTCCCACTAAAACAACGATTGATATGTAGTCTAG
TGGACAGGTGTGATATAGAACGTATCAGAACGGCGGTAAGCATATATGTT
ATTACAGTGCCATGAACTATCTATTGTGTGTTACAGTAGCTCTGTAGTAT
GTATGTATGTATGTATGTAGTATGTATTTATGTATGTATGTATATTTATG
TATGTATGTATGTATAGTCACACATATAGCAGCGTGGATCAACCGGGTAC
GGTTGCCAATCCTGCTCGTGGTCAGCCGAACAGGGAGGGAAGATGAATAT
TTTCCTGTCCGCGTTCGCCCCTGATAATTTTGTCTCACGAGACGGGTTCG
GCAATCCCGTCCTGCGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCT
GGTGCTTACTTAACGGGATTCCTTCCGAGTTCCGCGGCGGCGTCCATTTA
TTTATTTTAAACCGCCATAATACGCCATCGTGTCAGTCCCGAGTTTATCG
GGTCATCACGCAAATGCGTACCGATGGCGTTCGCTGCCGAGAGTCCGCCG
GCACAGAGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTGGC
AGGTCACCATGGAAAAATTAATATGCGCCTCGCTTTCCCACAGCCGCACT
ATTGGTATGAAGTGGTTATAGCATGTTGAAAGTACTACTAAACCGGAGTA
GTTATACAAATACAAGTCGCGTTTTTCTGGGTACAGAAAGTATCAGGGGC
GGTAATATATATGATGCTGTATGATATTTATAACATGAACTCCTTGTTGT
GCGCTAGCTCTGGAGTAGGGTTTAAAGAAAAATCAGAACGCACCTAGACC
TTCTGAGCATCCCCCAGTTAACAAGTATCAAGACCAGTCGCTTTTCTGTG
TATAATCCTGAGGGTTGCGTTGAGAGACTGTTCAAGATTCAAATTAGTTA
ACTCATATGTTTTCTTTCGACTTGATATGATATTATTTGCTACCCACACG
AAGATACTATACGACGGGTGTTGTACTGTACAGTATTATATAGTTGTACC
TTCTATTTTTCTTCTTGTAGATGCACACCATCATTGTTATGTATTTTGCA
CGTTGTTTGTGCCGTAACGAACCCATCTCAGTACCACCGGGCAGTTGATA
GTTGTCGGACGAGTCCACGACCCATAGTCAAAAAGTGATGACCACACATA
CCTATATATATTACACCTAGACTGAACCTAGTTTTTCGACGGATGGACCA
CGTCGAGAAGACTAACACATAAATGTAGTAGCTATAATAAGCTTATCCCC
CTCCTGTACGTGCTGTACGTCAAACTTGTATGTATGTATGCCCCTGTAAT
TTACCAGGTTCAGGATCTAGCGTGGGCGGCAATTATTTTCCACGTCCTTG
CTCTTGCCGCGGCAGGCTTTCTGAATTGGGGTGAGTTTTGTTTTCATAAC
ACACACACTCTGAGATGGCTTTCTCGGCTTTATACTATACTACTATTAAT
AATGAGATGGTGATGGTGATGGTGGTGGTGATAAAGCATTGTCCCTTTTT
CTCTTCGTTTTTGTGTCAAGTCTTAGACTTGATCCCAAAAAAAAAAAACG
TGGTTACTCAAATATGGGAAAAAAATGGACCTATGTATGGGAGATATGTG
TAATAATATTAGTCACGCCCCATAACCGACAACTAGGTAGGTACAAACTA
ATCGACTACCAGTACTGTATTTAAACTCTGATAAGAAAAGAGCTACTTCA
TTTATACTGAGAAAAGGAGCTACTTTATATAGTGATGGTTGTTCGATAGT
TGACAATATTTTCCAGAGAACTCTCGGGATGCTACTTACAAAAAAAATAG
TGACATATTACTGTGCACCGTAGTCCGACATTCTCATTAATAGTCTGATA
TTGTTCCTTGTTTTTGTTTTGGTGTCCCTACGTGGTGATTAATGTTAGTG
TACAGTACTGTATAACGGTGGGCTTCTCCCCGATATTAAACTGTTCACCC
TATGTGACTACATTGGGGTTTTTCTTTAAAAAATAATAAGCTTTCTGATT
AGGCTACAGAACAGAGCGTCGTTCGTCCCTTGGGACGAGAGCGCATAATA
AACAATACAGCATGTAGCATATATAAGGTGCGGTTATATATGTATTATAT
TCCCAGCTTTGATTTCGCAAAGAAGCTTTAATATCGTTCACCCTTGTGTG
GGTGCGACACGCCGCCAGCAGTTACTATAAATATTATAGTATTATAGTAT
TATAGTACCGGAATAAATTATTGTCATGGGAAATGAAAGGCAGGGGCGGA
ATTCTCAGAGTATGGGGTATTTTCCCGTAGACTTCAGCATCGCCAACGAT
CCAACGACCATACCTACCAACCAGGTAGGAAACTTTCACAACGGTCGACA
ACTCCTCTCGCGAGGTACGTCTATAATAATATACTGTATAGTATTATTAA
TAGCATTAATAGGATTAATAGAAGACAGGGAACTATCAATATCAAATATA
ATACTAGTGTATATATAGTATGATTATTACCGTAATAGTTCAACGGTCGG
CAATATTACTGTATTCCTCCTCGCTGACGTAGGGAGATTGGGAAGGTGTG
AAGGGGATATGTGTGTGTGTGTGTGTTTTCTTCCCATCCATTCTGGACAT
CAAGTTCGTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTCACACA
GGATTTTTAATCCACCTTCCTTCTGCGGTGCGTGCCTTGATTTTTGTCGC
GAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATTTT
GTGTACAGTACTAACGAATTAATCGTTCTCCACCCGTTGGGCATTTTTTT
TTTGTTTTTTTTTGTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAA
CTCACGTCCCAACGTGTCAGAAGGTTACGAGGTGCCTACTGAGCTACCGG
TCGACCTGGAAACCGCTTTCTTACAGCGTCAGTTATTAATAGTTAGTCAG
CGAGCATTCGTCTTCATGTAGGTACCGTATGTAGGGAGAACTGGGTGGGG
CGGTATGCAGGGATAATAATAGTATTATATGGAGATCTGATCGATGTATT
ACTATTAAATCGTACTCAGGGATGATAGCAGCAGCAGTCAGCGATAATTT
CTCTGAAGACGATATACAGCGCCTCCTCATCATGTGGTATCAGTCTGTCT
CGCGTCCATGCGCCTGTATTATTTTTTATCGTGGTGCTTCTTTTCGTCCT
TTCAATACTTTACTCTGTAATTTATAGTTACCAGGGTAACATTCTAATGC
TATTACTTGATTACTACGTTCATCTGGCTTTTGAGCTCGTGTCTTAACTT
CTGCTTTTTCTTCAGCCCAGCCTGAAGTGTATGGTATGGTATGGTATGGT
ATGGTATGGTATGGTATGGTATGGTATGCCCTTGATGCCCTAATAATTAG
GAGAGCTATAACGCACGAAACACCACCTGATACACAAAAGCCTATATACT
ACGTAGTACTTAATAATTCTGCCTGGTTTCAAGTAGACTCAAACTCTTGG
TAATAAATGAAAAAACTGTCATTTAAACTATGAGCAGGAGGCGGCACCCC
AATGATGTTCAGCAGGATAACTTTTTGCTCTTAGATTTGCTTACAGGCCA
AGAACCTTGCTTGGGAGGGCATGAGCTGCTTGGGAAAAGCCCTGCCTTTA
CAGCGCCGGGGGGGGAAACATATAGTAGGACAAAGAAGCGTCCTGATCAA
GATCAAAACAACTCGAAAGAATCACATGCATGCCCTGCTTCTTCTATGTT
TCTTTGCTGGGCCTGACTCTATATCACTTCCTGATGGGTGGTTCAACTTG
TCTTCTCAGGCAGGGACGTAGAGTGCAAACGATGAGACACAGGGGATCGA
ATCGCGAACTAAAAAGAAGAAGGAAAAAAAGCATGCATGCATGCGTAGCT
CTACAATGTCATACACTGTATACAGTATATGTAACGACCGCACCTATCTA
TCAGTTCTACTCGGTCCGCCACCTGGAATAGAACATAGAACCGAAGTTTT
TTGTGTTCTAAATCTGAAAAAAAATGCGGGCGATACCCGGTTTCGTTCTG
TTTCGGTTTCATTGTGGGTGAGTCTGGCATGATGAGTGGTGTGACTCGTG
TCGTGTAGTTGTTGGCATGCATATACGCCAAGTAGAATACAAAGTGGGGT
TCGATGTATCGTCGTTTCGGCGGTATCTTATATTATAACAATCTTATACC
GGAGTATAAAAGACATAAGGTACAAGTTAAAAAAGAGTTACAGTAACTTT
GTCGCCGCGGGGGGGGGGGTAGAGTCGCAGATGAGAGCGTTATCATCGTT
ATCATATCGGATACGAAACTGTGGGGTGTAAACACTCCCTACACTTAGGC
GCCGCTGTCACGTCTTCTTGCGCCTAACACGCAAGAAGAATGTAACGTCT
CGATCGCGAAGCTGTTCGTCGTGAGCTTAATCTCTATAACTAAGTAACGC
CGAAGCCGATGACGCCGCTGGAGAAACTTTCCTAGGGCTGTTTCCTGCAG
AGGGTTTGTTGTGTGATCTCCGGCAGCATGGATCAGAGAACGTGAAAACC
AGAGACTTACGACGAGCACATTCCGCTGGAGGACGTGAATTCTTGCATAT
CCCCATGCCCTTACTACCCGTGACCTCCCAACCGATCTGCGAACCGAATC
CTTCGCTGGCTGACGGCTGACAGCTCAATGGGCCGCAGCGGCAGTGGTCA
TACCGTGCAGCCTTGGAGTGTTGTGCCGGTTCAGAAAGGGGGCCTATACA
GCGGCTGTTGTTGGCTACGCCATAGGCGGCTTTTTCGACCTTGTGGCGGT
GGCGTTTTGGTAAGTCACGCTTGCGTACGAACCTAGGCGCCGTAATCGAT
GCAGATCTTAGAAGATATCTCTGAACTCTAGCATGCATTCGGACATGCGA
TGCCGCCGTGTTTGTGCGACCCAGTATTTTTTTCACGTCCAGAGCGTTGC
TAAGGTGAAAAAATAGACGTGATCGGGCGTTCATCTTGATGCAAACGATA
CAAGCAATCTGTCTGAATCTCCCCTCTCGGCCCGGGGATTTCGTTCAAGT
GTCTCGCCTTTTCGAATTCAAAACCGACCTTTACATGGGTTTCGAACACA
CAGGATTATATTTTACTTCGCCGTCAAGGAACCCCTGGACGACGTCTGGG
ACAACTTTTTCGAACAGAACTACAACTCAACGATCGTCGTCGAGGATGAA
CACGACTTCGAGGATTGGACTGAAGTCATTGGCTGGCCGGCACTCGATGC
CATCGTCGACTGGCTGGAGGTGACTTCCGACGTGGTTCTCTGGTTCGCGA
TTTTTCCAGCGCTTGCCGCGTTGGTTGTCCTTGAGGGTTACAGATCCGCC
TTTGTTGCTATCAAGAAATGGCAAGACAGTGGGGCCCCCGACGCGCGCCA
AGAGGTTCAGGTCAGTCCGAGACGCGGTGGGGGGGGTGTTTCGGTAGTAG
TGGAGCTGTTATGTGATGGCTCCCATAATAATGTTGGGTATCCACAAAAA
AAGGGCGGGCAGTATACACGTTGTCTTGGGGGGCAACAACACGCAAAATT
CTTCGTCAATCTCTCCGAATGTGAAAATCGTTCAGACCGCTACGGGGCAC
ATTTTTGTGTTTTATGTTGTAATCATACATCATTGCGTTCCAACAGAACG
TTCTCGCTTGTTGGCACGATTGGACGTGTTGAGTTGCCGAGAATGTGCTG
AAGGGTAGGGATGCCCGAGTCTCCGACATGTTAACTCCACGCTCCCATAT
CTATCACTCTCGTCTCTTTTCCGAAGGATTTATCGCCCACACCGATCACT
ACAACGAAGGAGGTATTTCAAACGACGGCAAACTTTGTAAAGGAAAAAGA
AAAAGAAAAAGAAGAGGTCGAGCAGAAGTCATCAGCGTACACCGATGCGG
TCGAAGAAGGTCAGCAGGCTCGTGGTGGTCAGGATCTTGACCAGAATGAC
GTTGGCCAATGAATC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1060:100921..109385+ >mRNA_A-nodosum_M_contig1060.2.1 ID=mRNA_A-nodosum_M_contig1060.2.1|Name=mRNA_A-nodosum_M_contig1060.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at A-nodosum_M_contig1060:100921..109385+ (Ascophyllum nodosum dioecious) ATGGGGATGGCTGGAGGATGTTGCGCGGAGTCAACGGAGGCTTCGTCTGA AGTCACGCAGGTTCAGGATCTAGCGTGGGCGGCAATTATTTTCCACGTCC TTGCTCTTGCCGCGGCAGGCTTTCTGAATTGGGCTCAATGGGCCGCAGCG GCAGTGGTCATACCGTGCAGCCTTGGAGTGTTGTGCCGGTTCAGAAAGGG GGCCTATACAGCGGCTGTTGTTGGCTACGCCATAGGCGGCTTTTTCGACC TTGTGGCGGTGGCGTTTTGGATTATATTTTACTTCGCCGTCAAGGAACCC CTGGACGACGTCTGGGACAACTTTTTCGAACAGAACTACAACTCAACGAT CGTCGTCGAGGATGAACACGACTTCGAGGATTGGACTGAAGTCATTGGCT GGCCGGCACTCGATGCCATCGTCGACTGGCTGGAGGTGACTTCCGACGTG GTTCTCTGGTTCGCGATTTTTCCAGCGCTTGCCGCGTTGGTTGTCCTTGA GGGTTACAGATCCGCCTTTGTTGCTATCAAGAAATGGCAAGACAGTGGGG CCCCCGACGCGCGCCAAGAGGTTCAGGATTTATCGCCCACACCGATCACT ACAACGAAGGAGGTATTTCAAACGACGGCAAACTTTGTAAAGGAAAAAGA AAAAGAAAAAGAAGAGGTCGAGCAGAAGTCATCAGCGTACACCGATGCGG TCGAAGAAGGTCAGCAGGCTCGTGGTGGTCAGGATCTTGACCAGAATGAC GTTGGCCAATGA back to top
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