mRNA_A-nodosum_M_contig10597.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 293 bits (750), Expect = 6.050e-89 Identity = 149/275 (54.18%), Postives = 197/275 (71.64%), Query Frame = 1
Query: 13 LKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDTVLMHVGCTCHRIECVTVLVFDGPGMKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVTQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLDS 831
L KA P RR L+ +M E+ +L+ VA ML +YV++TTDGWTSR+NESY+S TV Y++ W++ L+L+C+K GST GEDLA I +MI+ HGLTG V C TDCEPSMVKAGR+L + L H+GC+ HR+E T VF+G + ++A ARAVV RY +SSQ +GRL GI+ + PL V QDVETRWWS+ +M+ERL+YL +A++LHES DN+AP+L DW VL L+EP+L PFM QK LE + VTGS+ VP I +LR GL++
Sbjct: 41 LNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEA 314
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 290 bits (741), Expect = 2.140e-87 Identity = 144/279 (51.61%), Postives = 196/279 (70.25%), Query Frame = 1
Query: 1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDTVLMHVGCTCHRIECVTVLVFDGPGMKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVTQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLDS 831
MV L +A +P RR L++RM + L+ VA ML ++V++TTDGWTSR NESY+S TV Y++ +WK+ L+L C+K G+T GEDLA + M++ H LTG V+ C TDCEPSM+KAGR+L D + + H+GC+ HR+E T VF+G + ++ LAR +V RY KSSQ A RL +LCGI+ + PL V QDVETRWWST +MV RL+YL +A++LHES+D V PLL DW VL L+EP+L PFM QK LE + VTGS+ + + +LR GL++
Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEA 278
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 266 bits (680), Expect = 2.850e-79 Identity = 130/277 (46.93%), Postives = 188/277 (67.87%), Query Frame = 1
Query: 1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDTVLMHVGCTCHRIECVTVLVFDGPGMKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVTQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLD 828
MVR LK +A++P +R+ + ++ + L V LTG++V++T+DGWTS +N++Y+ FT Y++ ++ +V L + C K G T GEDL +++ MI +GLT V TDCEPSMVKAGR+L ++ + H+GC CHR+E +T F GPG+ K++ALAR VVTRY SSQA+ RL+++ IV + +V QDVETRWWST + + RL+ LRR + HE +D++ PLL DW VL+++EP+ PF+ QK E S +VT SLV+P I DLR LD
Sbjct: 10 MVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELD 286
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 251 bits (640), Expect = 9.210e-70 Identity = 123/242 (50.83%), Postives = 166/242 (68.60%), Query Frame = 1
Query: 106 LTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDTVLMHVGCTCHRIECVTVLVFDGPGMKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVTQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLD 828
+TG++V++T+DGWT +N++Y+SFT Y++ ++ +V L L C K T GEDL +++ MI +GLTG V TDCE SMVKAGR+L ++ + H+GC CHR+E +T F GPG+ K++ALAR VVTRYT SSQA+ RL+++C IV + V QDVETRWWST + RL+ LRR + HE +D+ PLL DW VL+L+E +L PFM QK LE S VT LV P I DL+ GLD
Sbjct: 1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLD 242
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 211 bits (538), Expect = 1.430e-59 Identity = 108/228 (47.37%), Postives = 143/228 (62.72%), Query Frame = 1
Query: 148 SRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDTVLMHVGCTCHRIECVTVLVFDGPGMKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVTQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLD 828
S +N++Y++FT Y++ ++ +V L L K G T GEDL +++ MI +GLTG V TDCEP MVKAGR+L ++ + H+GC CHR E +T F GPG+ K++AL R VVTRYT SSQA+ RL+++C IV + +V QDVETRWWST +D++ PLL DW VL+L+EP+L PFM QK LE S VT SLV I DLR LD
Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELD 214
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 173 bits (438), Expect = 1.280e-42 Identity = 97/239 (40.59%), Postives = 146/239 (61.09%), Query Frame = 1
Query: 1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDD-TVLMHVGCTCHRIECVTVLVFDGPGMKKSMALARAVVTRYTKSSQAAGRLQELCGI-VGIIPLRVTQDVETRWWSTQSMVERLVY-LRRAVELHESLDNVAPLLGPVDWNV 708
MV ++ A +P+++ + M + + V+ ++ G+ V +T+DGWTS AN++Y+S T + WK+VTL++ CSK +G+T G+ LA I+ + HGLTG V TDCEPSMVK GR+L D TV +GC +R+E + +VF+GP +KK M LAR +VTRY SSQAA RL++ +G+ RV QDV T S+V +Y LR ++E +++D++ L D NV
Sbjct: 1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVTG-----SLVVPFIYDLRNSLE--DAIDDLVELPPDSDANV 232
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 154 bits (390), Expect = 3.530e-39 Identity = 103/260 (39.62%), Postives = 138/260 (53.08%), Query Frame = 3
Query: 927 DFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAKSTQASVRTTALSAAGSTPAGPGPGASARPASK-----------------------RFCGGFMAASQAQAASASTVTAAPSLPAEHFLKKAGR-EVTRYRATSGLAMEEAQESGKILYPDTLDWWRINAVKIPLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALKNIWSVVEEWQQS 1634
DF NR+GDG +IL ++EG RRQP GF+ VQV+ATALDPR K+LYGV +E VW+ V A IA T+ S S S+ GP + GG + A +S V + + R E+T ++ ++G+ M E + G +Y D LDWWR+ P LA LARR+L IPA+QA+SER+FS AG IVT+ RN L+ VELLV L++ W +VEEW+QS
Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSEN----SQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFV---------RLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI) HSP 1 Score: 113 bits (283), Expect = 6.690e-23 Identity = 75/261 (28.74%), Postives = 133/261 (50.96%), Query Frame = 1
Query: 40 RRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDTVLMHVGCTCHRIECVTVLVFDGPGMKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVTQDVETRWWSTQSMVERLVYLRRAVELHESL-DNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLESNNV-TGSLVVPLICDLR 816
+ +L A EE L D + + LTG+ +TTD WTS E+YI T ++++++K+ +L L CSK S K ED+A +++ + + G+ +++ +D +M KA + L + H GC H I + ++ + + +V + +S A +L PL++ Q+V+TRW ST M+ER V L A++ ++ D P L +W +L+ + +L P+ V K + + T ++V+PL LR
Sbjct: 159 KTLLPALYEECLNDTKKKI---LTGKSFCITTDSWTSNNTENYIGVTAHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLE---WKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPLCNGLR 413
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: A0A1X7T780_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T780_AMPQE) HSP 1 Score: 106 bits (265), Expect = 1.130e-20 Identity = 82/282 (29.08%), Postives = 129/282 (45.74%), Query Frame = 1
Query: 28 SIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDTVLMHVGCTCHRIECVTVLVFDGPGMKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVTQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPL------LGPVDWNVLELLEPVLAPFMYVQKKLESN-NVTGSLVVPLI-----CDLRTGLDSER 837
SI QR+ + EELL L+ YVS+T+D WTSR ++YI+ TV ++ + WKM + L + GE +++ + + + + +V D +MV A ++L D + C H ++ D P + + A+ R +V + S +A L+E + I + QDV TRW ST M ERL+ R A+ DN+ P L P W +L L VL P L + NV+ SL+ P++ C L+ G D +
Sbjct: 140 SICQRKFKTVK-EELLTTLESI-------PYVSVTSDIWTSRVTQAYITLTVHFITNTWKMESKVLQTQEMPERHTGEHISLRLSSASQQWKIKDKIVALVRDNAANMVLASQLLDDWD---DMPCFAHTLQLAVKAGLDLPLITRVSAVCRKIVGHFKHSVRAMEALREKQKSMNISQHSLIQDVSTRWNSTYFMYERLIEQRWAIYAVIHDDNITPSDQRHLDLKPEQWELLSQLSVVLKPLQVATTALSKDQNVSSSLIYPVVNGLVKCHLKIGTDDHQ 410
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Match: UPI0006234F41 (zinc finger BED domain-containing protein 4-like n=1 Tax=Linepithema humile TaxID=83485 RepID=UPI0006234F41) HSP 1 Score: 103 bits (258), Expect = 9.160e-20 Identity = 71/239 (29.71%), Postives = 123/239 (51.46%), Query Frame = 1
Query: 124 SMTTDGWTSR-ANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDTVLMHVGCTCHRIECV-TVLVFDGPGMKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVTQDVETRWWSTQSMVERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLESNNVTGSLVVPLICDLRTGLDSE 834
+ T+D WT +NESYISFT+ Y+N+D+++ AL+ GS GE++A I MI+ L + D ++ KA T + + + C H ++ V T + + +A++R +VT + S A +L+ + + + L++ QDV+TRW ST M++RL L+RA+ + L W++LE +L PF + K++ S+ S V+P++ L+ L E
Sbjct: 161 AFTSDIWTCNISNESYISFTIHYINEDFQLKHAALNVKHFPGSHTGENIAKIITEMIEEWHLNDKNYIIIRDSGANIKKA----TKNLDIQNESCFIHTLQLVVTEALKSQRTVNDLIAVSRKIVTHFNHSPAACYKLKAIQRELNMPTLKLVQDVQTRWNSTFYMLQRLFELKRAISIFTIETEAIVNLSSHQWSLLENCLKLLQPFEEITKEISSSESIISEVIPIVASLKKYLLKE 395 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10597.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10597.2.1 >prot_A-nodosum_M_contig10597.2.1 ID=prot_A-nodosum_M_contig10597.2.1|Name=mRNA_A-nodosum_M_contig10597.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=307bp MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSback to top mRNA from alignment at A-nodosum_M_contig10597:5583..7216+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10597.2.1 ID=mRNA_A-nodosum_M_contig10597.2.1|Name=mRNA_A-nodosum_M_contig10597.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1634bp|location=Sequence derived from alignment at A-nodosum_M_contig10597:5583..7216+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10597:5583..7216+ >mRNA_A-nodosum_M_contig10597.2.1 ID=mRNA_A-nodosum_M_contig10597.2.1|Name=mRNA_A-nodosum_M_contig10597.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=921bp|location=Sequence derived from alignment at A-nodosum_M_contig10597:5583..7216+ (Ascophyllum nodosum dioecious)back to top |