mRNA_A-nodosum_M_contig1058.46.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: D7FX88_ECTSI (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX88_ECTSI) HSP 1 Score: 208 bits (530), Expect = 4.430e-62 Identity = 104/185 (56.22%), Postives = 134/185 (72.43%), Query Frame = 3
Query: 198 HLETWSLRMMLDAGVRALDIRLRHVDD-SFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLVF*QINDLGPSTR----TPEESLQESLDAYPNHWIAGSTIPTLGEARGKVVLANDMAREEQNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGASVYPLTVAAGVRAVF 737
H + WSLR MLD GVRA+D+R+R D S LEHGIVELPY FD DVRDVL +F+++NPTE V++F Q+NDL T E++LQ S+ YP+ W+ G+ +PTL EARGK VL DM +EEQN+++L++ V+ KK LVR+FFLE PA G FRLNY SGTG VYPLTVAAG+++V+
Sbjct: 152 HTQAWSLRTMLDTGVRAIDVRIRRKSDLSLVLEHGIVELPYGFDVDVRDVLASFLTDNPTETVVMFYQMNDLAGEDSSGGVTAEDTLQASMSQYPDLWLDGAVVPTLEEARGKAVLPTDMGQEEQNDFNLSSFEAVATKKGLVRDFFLEGGGVPADGGPFRLNYLSGTGTYVYPLTVAAGLKSVY 336
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: UPI001F2D45DE (phosphatidylinositol-specific phospholipase C domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F2D45DE) HSP 1 Score: 107 bits (268), Expect = 3.670e-23 Identity = 68/192 (35.42%), Postives = 109/192 (56.77%), Query Frame = 3
Query: 192 LSHLETWSLRMMLDAGVRALDIRLRHVDDSFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLVF*QINDLGPS-TRTPEESLQESLD--AYPNHWIAGSTIPTLGEARGKVVLANDMAREE----------QNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGASVYPLTVAAGVR 728
L+ ++ LR LDAG+RALDIR RH+D++FT+ HG+V L FD+ +R +Q F++ NPTE V++ + + TRT ++ + D AY + GS +PTLGE RGK+V+ +D A Q+++ ++ L ++ K VR+ +++ A G +N+ SG+ A YPL VA G+
Sbjct: 65 LTQTQSLDLRSQLDAGIRALDIRCRHIDNAFTIHHGVVYLHVNFDDVLRTTIQ-FLNANPTETVVMRVKKEHTEENVTRTFAQTFEAYRDQPAYSPYLWRGSHVPTLGEVRGKIVILDDFAGGAYGIPWGAISLQDDWTVSQLADIDDKWFKVRDHLARTNTG--APGTLFVNFLSGSSALAYPLHVAGGIN 253
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: A0A511T7G9_MYXFU (1-phosphatidylinositol phosphodiesterase n=4 Tax=Myxococcus TaxID=32 RepID=A0A511T7G9_MYXFU) HSP 1 Score: 99.0 bits (245), Expect = 4.640e-20 Identity = 67/193 (34.72%), Postives = 107/193 (55.44%), Query Frame = 3
Query: 189 ALSHLETWSLRMMLDAGVRALDIRLRHVDDSFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLVF*QINDLGPS-TRTPEESLQESLD--AYPNHWIAGSTIPTLGEARGKVVLANDMAR----------EEQNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGASVYPLTVAAGVR 728
+L+ ++ LR LDAGVRALDIR RH+ D FT+ HG+V L FD+ +R +Q F+++NPTE V++ + TR+ ++ + D AY + GS +PTLGE RG++V+ +D A + Q+++ ++ L ++ K + VR L+ A F +N+ SG A +PL VA G+
Sbjct: 74 SLTQTQSLDLRKQLDAGVRALDIRCRHIGDRFTIHHGVVYLHVNFDDVLRTTIQ-FLNDNPTETVVMRVKREHTEEDITRSFSQTFEWYRDQPAYSPYLWRGSHVPTLGEVRGRIVVLDDFAGGAYGIPWGALDLQDDWTVSQLADIDDKWNKVRAH-LDRTQGGAPSKLF-VNFLSGASAMAHPLHVAGGIN 263
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: A0A540WUK7_9DELT (1-phosphatidylinositol phosphodiesterase n=6 Tax=Myxococcus TaxID=32 RepID=A0A540WUK7_9DELT) HSP 1 Score: 97.8 bits (242), Expect = 1.180e-19 Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 3
Query: 192 LSHLETWSLRMMLDAGVRALDIRLRHVDDSFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLVF*QINDLGPS-TRTPEESLQESLD--AYPNHWIAGSTIPTLGEARGKVVLANDMAREE----------QNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGASVYPLTVAAGVR 728
L+ ++ LR LDAG+RALDIR RH+ D FT+ HG+V L FD+ ++ +Q F++ +PTE V++ + S TR ++ + D AY + GS +PTLGE RGK+V+ +D A Q+++ ++ L ++ K + VR + + +N+ SG+ A YPL VA G+
Sbjct: 80 LTQTQSLGLRQQLDAGIRALDIRCRHIGDRFTIHHGVVYLHVNFDDVLQTTIQ-FLNAHPTETVVMRVKREHTEESNTRGFAQTFEWYRDQPAYSPYLWRGSHVPTLGEVRGKIVIVDDFAGGTYGIPWGAVNLQDDWTVSQLADIDDKWNKVRAHLDRTQGGSPS--TLFINFLSGSSAMAYPLHVAGGIN 268
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: F8CHM4_MYXFH (1-phosphatidylinositol phosphodiesterase n=4 Tax=Myxococcaceae TaxID=31 RepID=F8CHM4_MYXFH) HSP 1 Score: 97.1 bits (240), Expect = 2.110e-19 Identity = 60/191 (31.41%), Postives = 104/191 (54.45%), Query Frame = 3
Query: 189 ALSHLETWSLRMMLDAGVRALDIRLRHVDDSFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLVF*QINDLGPSTRTPEESLQESL---DAYPNHWIAGSTIPTLGEARGKVVLANDMAR----------EEQNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGASVYPLTVAAG 722
+L+ ++ LR LDAG+RALDIR RH+ DSFT+ HG+V L FD+ +R +Q F++ NP+E +++ + + + E+ AY + G +PTL E RGK+V+ +D A + Q+++ ++++ +++GK D VR +++ + +N+ SG A +P TVA G
Sbjct: 63 SLTQTQSLELRKQLDAGIRALDIRCRHIADSFTIHHGVVYLHVNFDDVLRTSIQ-FLNANPSETLVMRVKKEHTEENVTRSFAATYEAYRNNPAYQPYLWTGRHVPTLREVRGKIVILDDFAGGTYGIPWGGLDLQDDWTVSSIFDIAGKWDKVRGHLTRTNTGSPS--TLFVNFLSGASAFAHPFTVAGG 250
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: A0A0H4WXD2_9DELT (1-phosphatidylinositol phosphodiesterase n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4WXD2_9DELT) HSP 1 Score: 95.5 bits (236), Expect = 7.390e-19 Identity = 67/195 (34.36%), Postives = 107/195 (54.87%), Query Frame = 3
Query: 189 ALSHLETWSLRMMLDAGVRALDIRLRHVDDSFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLVF*QINDLGPSTRTPEESLQESLDAYPNH-------WIAGSTIPTLGEARGKVVLANDM----------AREEQNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGASVYPLTVAAG 722
+L+ ++ LR L+AGVRALDIR RH+ DSFT+ HG+V L FD+ +R +Q F++ NP+E V++ + + S E+ AY N+ W GS +P+LGE RGK+V+ +D + Q+++ ++TL ++ K + VR LE + A+ F +N+ SG A +P +VA G
Sbjct: 79 SLTQTQSLDLRKQLEAGVRALDIRCRHIADSFTIHHGVVYLHVNFDDVLRTTIQ-FLNANPSETVVMRVKKEH---TEENVTRSFAETYLAYRNNPAYRPYIWT-GSQVPSLGEVRGKIVILDDFGGGAYGIAWGSLNLQDDWTVSTLFDIGNKWNKVRAH-LERTNTGASSSLF-VNFLSGASALAHPYSVAGG 266
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: L7UB27_MYXSD (1-phosphatidylinositol phosphodiesterase n=4 Tax=Myxococcus TaxID=32 RepID=L7UB27_MYXSD) HSP 1 Score: 94.7 bits (234), Expect = 1.370e-18 Identity = 63/193 (32.64%), Postives = 102/193 (52.85%), Query Frame = 3
Query: 192 LSHLETWSLRMMLDAGVRALDIRLRHVDDSFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLVF*QIN----DLGPSTRTPEESLQESLDAYPNHWIAGSTIPTLGEARGKVVLANDM----------AREEQNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGASVYPLTVAAGVR 728
L+ ++ LR LDAG+RA+DIR RH+ D FT+ HG+V L FD+ ++ +Q F+ NPTE V++ + D+ S E + + P W GS +PTLGE RGK+V+ +D A + Q+++ ++ L ++ K + VR + S ++ +N+ SG+ A YP VA G+
Sbjct: 75 LTQTQSLDLRTQLDAGIRAVDIRCRHIGDRFTIHHGVVYLHVNFDDVLQTTIQ-FLQANPTETVVMRVKKEHTEEDVTRSFAQTFEWYRNRPEYNPYLW-RGSHVPTLGEVRGKIVVLDDFGGGTYGIPWGALDLQDDWTVSQLADIDDKWNKVRAHLDRTQSGSSS--KLFVNFLSGSSAMAYPRHVAGGIN 263
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: UPI0013DD2904 (phosphatidylinositol-specific phospholipase C domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI0013DD2904) HSP 1 Score: 90.9 bits (224), Expect = 2.900e-17 Identity = 60/190 (31.58%), Postives = 105/190 (55.26%), Query Frame = 3
Query: 192 LSHLETWSLRMMLDAGVRALDIRLRHVDDSFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLVF*QINDLGPS-TRTPEESLQ--ESLDAYPNHWIAGSTIPTLGEARGKVVLANDM----------AREEQNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGASVYPLTVAAG 722
L+ ++ +LR LDAG+RALDIR RH+ D+FT+ HG+V L F DV + F+SE+P E +++ + + TRT ++ + A+ + GS +PTLGE RGK+V+ +D + + Q+++ ++TL ++ K + VR ++++ + +N+ SG+ A +P VA G
Sbjct: 80 LTQTQSLNLRAQLDAGIRALDIRCRHIGDAFTIHHGVVYLNVNF-TDVLNTATQFLSEHPRETLVMRVKKEHTEENITRTFAQTFEWYREQPAFKPYIWRGSHVPTLGEVRGKLVILDDFGGGAYGIPWSSLDLQDDWTVSTLFDIDDKWNKVRAHLEKTNTGSPS--KLFVNFLSGSSAGAFPYMVAGG 266
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: UPI001CCE2E8E (phosphatidylinositol-specific phospholipase C n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCE2E8E) HSP 1 Score: 90.1 bits (222), Expect = 4.750e-17 Identity = 64/204 (31.37%), Postives = 112/204 (54.90%), Query Frame = 3
Query: 189 ALSHLETWSLRMMLDAGVRALDIRLRHVDDSFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLV-F*QINDLGPSTRTPEESLQ--ESLDAYPNHWIAGSTIPTLGEARGKVVLA----------------NDMAREEQNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGAS--VYPLTVAAGVRAVF 737
+L ++ LR LDAG+RALDIR RH+ D F + HG V FD+ +R +Q F+ ++P+E VL+ + D +TR+ EE+ +S AY N G+T+PTL + RGK+V+ ++ + + Q+E+++ L ++ K + + F ++ S A+ +N+ SG+ ++ V+P TVA+G +V+
Sbjct: 88 SLVQTQSLPLRTQLDAGIRALDIRCRHIGDRFAIHHGSVYQHANFDDVLRTTIQ-FLKDHPSETVLMKVKEEYDAEGNTRSFEETFAWYQSQTAYKNFIWTGTTLPTLEQVRGKIVIVQAFGGGSYGVRWPSDGSNASFDVQDEWEVTWLWDIPTKWERILAQFEKTKSGSAS--VMYVNFLSGSSSTGGVHPYTVASGEGSVY 288
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Match: UPI0009E30A81 (phosphatidylinositol-specific phospholipase C n=1 Tax=Allosalinactinospora lopnorensis TaxID=1352348 RepID=UPI0009E30A81) HSP 1 Score: 89.0 bits (219), Expect = 1.210e-16 Identity = 71/211 (33.65%), Postives = 102/211 (48.34%), Query Frame = 3
Query: 171 LSRTTTALSHLETWSLRMMLDAGVRALDIRLRHVDDSFTLEHGIVELPYAFDEDVRDVLQAFVSENPTEAVLV-F*QINDLGPSTRTPEESLQESLDAYPNH--------WIAGST---IPTLGEARGKVVLANDM--------------AREEQNEYDLATLGEVSGKKDLVRNFFLESDSAPAAWGAFRLNYFSGTGASVYPLTVAAGV 725
++R T ++ + L L AG+RALDIR RH D F + HG V L F + +RD F+ E+PTE VL+ + +TR+ E+L+ L+ P+ W G IPTLGEARGK+VL D A + Q+EY + T+ ++ K R F ++ S + A +N+ SG G YP VA GV
Sbjct: 85 MARGVTPAANTQDSGLPEQLGAGIRALDIRARHHRDVFPIHHGRVYLNANFTDVLRDTTD-FLKEHPTETVLMRLKEEYRAEENTRSFAETLEWYLNDNPDTADLAREHLWSPGGDGRRIPTLGEARGKIVLLQDFNGDGAVYGPRWGGPAMDIQDEYRVPTIFDIDDKWHKARAHFEKTGSGDSE--ALSVNFLSGAGVGAYPKEVARGV 292 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1058.46.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1058.46.1 >prot_A-nodosum_M_contig1058.46.1 ID=prot_A-nodosum_M_contig1058.46.1|Name=mRNA_A-nodosum_M_contig1058.46.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=177bp MVPPDDAGRRGAGARHSPQARRRLLYARARHRGAAVRLRRGREGRPPGLRback to top mRNA from alignment at A-nodosum_M_contig1058:256361..257349- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1058.46.1 ID=mRNA_A-nodosum_M_contig1058.46.1|Name=mRNA_A-nodosum_M_contig1058.46.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=989bp|location=Sequence derived from alignment at A-nodosum_M_contig1058:256361..257349- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1058:256361..257349- >mRNA_A-nodosum_M_contig1058.46.1 ID=mRNA_A-nodosum_M_contig1058.46.1|Name=mRNA_A-nodosum_M_contig1058.46.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=531bp|location=Sequence derived from alignment at A-nodosum_M_contig1058:256361..257349- (Ascophyllum nodosum dioecious)back to top |