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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 868 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 531 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866433.351573-UTR-A-nodosum_M_contig1053:262411..262662 | 1680866433.351573-UTR-A-nodosum_M_contig1053:262411..262662 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1053 262412..262662 + |
| 1680866433.3612792-UTR-A-nodosum_M_contig1053:263125..263176 | 1680866433.3612792-UTR-A-nodosum_M_contig1053:263125..263176 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1053 263126..263176 + |
| 1680866433.3984714-UTR-A-nodosum_M_contig1053:264213..264248 | 1680866433.3984714-UTR-A-nodosum_M_contig1053:264213..264248 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1053 264214..264248 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866433.37051-CDS-A-nodosum_M_contig1053:263176..263324 | 1680866433.37051-CDS-A-nodosum_M_contig1053:263176..263324 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1053 263177..263324 + |
| 1680866433.383272-CDS-A-nodosum_M_contig1053:263830..264213 | 1680866433.383272-CDS-A-nodosum_M_contig1053:263830..264213 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1053 263831..264213 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1053.37.1 >prot_A-nodosum_M_contig1053.37.1 ID=prot_A-nodosum_M_contig1053.37.1|Name=mRNA_A-nodosum_M_contig1053.37.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=177bp
MMVMASVAVVGSFKAEFTKGTGSPTCANNPVMVACVHFNHGGCTTTSNSS
QFCTNIQAYRTTAVILPAKNGMIQLIGRLSSLVPNADGASERRLINKINT
MIGTEPEEADVTHVSVYDCGVIPPNCLYFMVLDLCVIDKTLLLCPSSWSG
IHLSDVQFAEHAPLTWKILFGRNVQK* back to topmRNA from alignment at A-nodosum_M_contig1053:262412..264248+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1053.37.1 ID=mRNA_A-nodosum_M_contig1053.37.1|Name=mRNA_A-nodosum_M_contig1053.37.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1837bp|location=Sequence derived from alignment at A-nodosum_M_contig1053:262412..264248+ (Ascophyllum nodosum dioecious)
GGCTCCACGCCGATCACCGCTCAAGCACCTTGGTTCTCCCCCGAAGACTC
CCGTCTTCATGGCCCGCAAAAAGCCGCAAGAGTCGCATAGGCGACGCACC
ACAGGCTCAATCGGCCAATCTTACGACGCCACGTCTCCCTCAACGTCGGG
GAACGTGGACCCACGCAGCGGTTGTTCGTCTAGTGGTTGGAGTCCCCGCG
GGGATTCTGATGGGAGCTTCTCCCGGCACGCTCCTCCCAGGTCAATAAAA
CGTAGGGTCAACCCGGGGCAAGGGGGGATGGGTTTTCTCGATCCGCCCGG
ATGACTCCGATGAATATACATTTGTCAAGAAACAAAAGCCCGGACAGGTA
CtCATCGCCGGCGTGCCCCTGCTAGGGTACATTAGGTCTCATATAGACCT
TGACCTCGACCAGTGCCTCTCCCTCGTGGGCCCGATTTTACGACTATCAA
AGGATCCCGTGGGGGTTCTTCAACATACATCCAAGGTAAACAGTATCCGC
CGGACCTTGTTCTTGAAAAGTACTGGTTATGTTGCTGTTGAGTCCAAATA
CCGTAGCTTGGAATGTATACATCCTGGTATGTGTGTATGAATTGTATGGG
GTTTGTTTCGACAGGTGCTCGCCTCTCTCATAACCCCCCTTGCACTCTCG
TCTTTTCTCTCCTctcCTCCGCTCCCACCTGCACCCCGAACCCACCTTGC
ATGGAAATCAATAGGTGATCAACATCCGGCCGCAGAGCAGCCAGGAAAGA
GCAGAGGCCCAGAAGATGATGGTGATGGCGTCCGTAGCTGTCGTCGGAAG
TTTTAAGGCCGAGTTCACGAAGGGCACGGGAAGCCCTACTTGCGCAAATA
ACCCAGTGATGGTGGCGTGTGTGCACTTCAACCATGGCGGATGCACCACG
ACTAGCAATTCAAGTGAGCTTTGCTTGTAGATTGGACACCAACCACAATC
ACATGTCACCGTGAAATCGTGGAATTCGATCACGGCTTCAAATATTGGTT
GATCTGCAGTAGATTATTTAGCCGGTCACATGTTTCCAAAACGCGAGTAG
ATGATCGTTACAATAACGCTCTTTAACGACCATCGAAACCCCCATCCGGT
GACACATCACATGTTTGCTATACGCAAGTAGAGGATCATTATAACAACGC
TCTTTAACGACCATCGAAACCCCCATCCGGTAACACATCACATGTTTGCT
ATACGCAAGTAGAGGATCATTATAATAACGCTCTTTAACGACCATCGAAA
CCCCCATCCGGTAACACATCACATGTTTGCTATACGCAAGTAGAGGATCA
TTATAATAACGCTCTTTAGTGACCACCGAAACCCCATCCCGTAACACATG
TTCAAAACGCATGTAGATGCCGAACAGTCCCCTCTCATTGTTTTTTCTTC
CAAACACCGGCTCGCACAGGTCAGTTCTGCACCAATATCCAGGCCTACAG
GACTACTGCCGTCATTTTGCCTGCGAAGAATGGAATGATCCAGTTGATAG
GCCGTTTGTCAAGTCTCGTGCCAAATGCGGATGGTGCTTCCGAGCGTCGC
CTGATCAACAAGATCAACACCATGATTGGCACCGAGCCTGAAGAGGCCGA
CGTCACCCACGTGAGCGTTTACGATTGCGGGGTAATACCTCCGAATTGCC
TCTACTTCATGGTGTTGGATTTGTGCGTGATAGACAAGACTCTCCTTCTA
TGTCCTTCGTCTTGGAGCGGGATACATCTGTCTGATGTCCAATTTGCTGA
ACATGCACCTCTCACATGGAAAATCTTGTTCGGGCGAAATGTCCAAAAAT
AGCCGACAACTTGATCACTTTAAGTCACTCCGACATG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1053:262412..264248+ >mRNA_A-nodosum_M_contig1053.37.1 ID=mRNA_A-nodosum_M_contig1053.37.1|Name=mRNA_A-nodosum_M_contig1053.37.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=531bp|location=Sequence derived from alignment at A-nodosum_M_contig1053:262412..264248+ (Ascophyllum nodosum dioecious)
ATGATGGTGATGGCGTCCGTAGCTGTCGTCGGAAGTTTTAAGGCCGAGTT
CACGAAGGGCACGGGAAGCCCTACTTGCGCAAATAACCCAGTGATGGTGG
CGTGTGTGCACTTCAACCATGGCGGATGCACCACGACTAGCAATTCAAGT
CAGTTCTGCACCAATATCCAGGCCTACAGGACTACTGCCGTCATTTTGCC
TGCGAAGAATGGAATGATCCAGTTGATAGGCCGTTTGTCAAGTCTCGTGC
CAAATGCGGATGGTGCTTCCGAGCGTCGCCTGATCAACAAGATCAACACC
ATGATTGGCACCGAGCCTGAAGAGGCCGACGTCACCCACGTGAGCGTTTA
CGATTGCGGGGTAATACCTCCGAATTGCCTCTACTTCATGGTGTTGGATT
TGTGCGTGATAGACAAGACTCTCCTTCTATGTCCTTCGTCTTGGAGCGGG
ATACATCTGTCTGATGTCCAATTTGCTGAACATGCACCTCTCACATGGAA
AATCTTGTTCGGGCGAAATGTCCAAAAATAG back to top
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