mRNA_A-nodosum_M_contig1053.12.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1053.12.1
Unique NamemRNA_A-nodosum_M_contig1053.12.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: D8LKI8_ECTSI (Divergent RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI8_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 6.640e-72
Identity = 142/302 (47.02%), Postives = 194/302 (64.24%), Query Frame = 2 
Query:   53 MGQVASCYASRCCCCRCSFWRRLSHTTSRESHEHHELRLLKPSFEASRKAREREAGKYSLIKKTYHPHLRGLGDDINRLNQVVRVVLIGACDTGKTCFLRRYLEGYYAEHGHHDDYRR----TLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLGNKADH--PYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNIDVVGFHIIHEILHHRKYSARETVPG---GGTVIRSGRKQLSLALRDVTMDASDR 931
            MGQ ASC +    CC C   R+ +      + +  +L L   S + + K R+ +  KY    +    HLR L  DIN   QVVR+VL+G CDTGKTC LRR+L GY+ + GH D  R+    TLG DFG + +++AD +VRLQMWDTGGSE YRSV+SHYL  ADGV++C+DVN K +L  L++TW PF+D+H P TCRVLL GNKAD    +  +G   ++ + AKR AEA++AQ+FETSAKLG N+DV    ++ E+LHHR+++A +       G +  R GRK+LS++L+ V     DR
Sbjct:    1 MGQAASCCSF---CCPCPLRRKAAAVPGATTEDQSKL-LPSSSTKKAHKPRKEKCSKY----RRPPSHLRELSGDIN---QVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK-TLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGE-VSHEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKARSSKKGSSPARRGRKRLSVSLKGVMERNGDR 289
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: A0A835YYU6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.220e-29
Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 2 
Query:  299 VRVVLIGACDTGKTCFLRRYLEGYYA-EHGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLGNKAD 664
            VR+V++G C  GKT  +RRYL GY+  +      Y  TLG DFG K + +   +VRLQ+WDT GS  Y SV+SHYLHAADGV L YD     S + ++  W+P V  +AP   R LL+GNK D
Sbjct:    5 VRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCD 127
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: Q3SD05_PARTE (Rab_A48 protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=Q3SD05_PARTE)

HSP 1 Score: 117 bits (294), Expect = 2.200e-26
Identity = 55/183 (30.05%), Postives = 104/183 (56.83%), Query Frame = 2 
Query:  266 LGDDINRLNQVVRVVLIGACDTGKTCFLRRYLEGYYAEHGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLGNKADHPYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNIDVVGFHIIHEIL 814
            +  + N  + +++VV++G C+ GK+C L RY E Y+        Y  T+G DF  +++++    V+LQ+WDT G E ++++ ++Y   A GV++ YDV  +++  D   +W+  +D++   + + L++GNKAD P      R ++ Q     A+  +A+  ETSAK   N+D +   I  +++
Sbjct:    1 MNKNTNAYDTLIKVVIVGNCNVGKSCILMRYSENYFTS-----QYYNTIGVDFKTRVIKIGHLNVKLQIWDTAGQERFKALTNNYYRDAHGVVIVYDVTERSTF-DAVDSWIEDIDKYGRKSVQKLIVGNKADIPNK----RKISLQEGLEKAKQFNARFLETSAKTSDNVDKLFISICEQVM 173
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: UPI001BB1E872 (ras-related protein Rab-15-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1E872)

HSP 1 Score: 114 bits (286), Expect = 3.290e-25
Identity = 64/179 (35.75%), Postives = 99/179 (55.31%), Query Frame = 2 
Query:  290 NQVVRVVLIGACDTGKTCFLRRYLEGYYAEHGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLGNKADHPYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNIDVVGFHIIHEILHHRK 826
            N   +++LIG    GKTC LRRY+EG +  +      + TLG DF  + L V   ++RLQ+WDT G E +RS+   Y   A G++L YDV  + S   L + W+  V  +AP   +V+L+GNK+D   ++D +R ++RQA +  A+    + +ETSA    N+     H+   +L   K
Sbjct:   14 NGSYKILLIGGSGVGKTCLLRRYVEGEFPLNS-----KATLGLDFKIRTLIVDKDEIRLQLWDTSGQERFRSMTQAYYRGAAGIVLVYDVTAEDSFSTL-SDWLGDVSMYAPEDVKVILIGNKSD---ADDDERIISRQAGEEFAKEHGLKYYETSAVTNENVAEAFEHLAKLLLEDEK 183
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: A0A6J2T9V8_DROLE (ras-related protein Rab-43 n=1 Tax=Drosophila lebanonensis TaxID=7225 RepID=A0A6J2T9V8_DROLE)

HSP 1 Score: 112 bits (279), Expect = 3.220e-24
Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 2 
Query:  302 RVVLIGACDTGKTCFLRRYLEGYYAEHGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLGNKADHPYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNIDVVGFHIIHEI 811
            +VVLIG C TGKTC + R+  G Y      D +  T+G DF  K + V   QV+LQ+WDT G E +R++   Y  +A+GVI+ YD+ ++AS  +L+  W+  V  +      ++L+GNK D     + D    R  ++ + E +   + ETSAK   N++   F +  E+
Sbjct:   22 KVVLIGDCGTGKTCIVERFKTGNYV-----DRHGNTIGVDFSMKTIAVDGKQVKLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRASFSNLQR-WIEEVRRYTASNVPIILIGNKCDLETEREVDFEEVRHVSQFIPEVLF--VMETSAKENTNVEDAFFCLAMEL 183
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: A0A7M7NNG3_STRPU (Uncharacterized protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NNG3_STRPU)

HSP 1 Score: 110 bits (276), Expect = 7.890e-24
Identity = 64/186 (34.41%), Postives = 104/186 (55.91%), Query Frame = 2 
Query:  302 RVVLIGACDTGKTCFLRRYLEGYYAEHGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLGNKADHPYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNIDVVGFHIIHEILHHRKYSARETVPGGG 859
            +++LIG    GKTC LRRY+EG +  +      + TLG DF  + L V   ++RLQ+WDT G E +RS+   Y   A G+++ YDV  + S   L T W+  V  +AP   +++L+GNK+D   +++ +R +++QA +  A+    + FETSA    N+     H+   +L   K + ++T  G G
Sbjct:   19 KILLIGGSGVGKTCLLRRYVEGEFPLNS-----KATLGLDFKIRTLIVDTDEIRLQLWDTSGQERFRSMTQAYYRGAAGIVIVYDVTAEDSFTTL-TDWLGDVSMYAPEGVKMVLIGNKSD---ADEDERVISQQAGEEFAKEHGLKYFETSAVTNQNVAEAFEHLAKLLL--EKENKQQTSNGIG 193
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: A0A7S4Q6D0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q6D0_9DINO)

HSP 1 Score: 111 bits (278), Expect = 1.180e-23
Identity = 57/162 (35.19%), Postives = 95/162 (58.64%), Query Frame = 2 
Query:  296 VVRVVLIGACDTGKTCFLRRYLEGYYAEHGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLGNKADHPYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNID 781
            + ++++IG C  GK+  LRR+++G Y+       Y  T+G DFG++   V   +V+LQ+WDT GSE +RS+ S Y   A GVI+ +DV+ + + + +   W+    +HAP + R +L+GNK D    E   R+++R  A  +A+ +   L E SAK   N++
Sbjct:   29 IFKILVIGDCGVGKSSLLRRFVDGEYST-----QYTATIGVDFGQRSCTVDGKKVKLQIWDTAGSERFRSITSGYYKGAHGVIVVFDVSDRKTFDHVGF-WLAEAGKHAPTSARRMLVGNKCD---IEGPGRAVSRDEALELADRLGLPLLEASAKSAENVE 181
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: UPI0014438C58 (ras-related protein Rab-43 n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI0014438C58)

HSP 1 Score: 112 bits (279), Expect = 1.190e-23
Identity = 68/202 (33.66%), Postives = 113/202 (55.94%), Query Frame = 2 
Query:  302 RVVLIGACDTGKTCFLRRYLEGYYAE-HGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLGNKADHPYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNIDVVGFHIIHEILHHRKYSARETVPGGGTVIR--SGRKQLSLA 898
            ++VLIG C TGKTCF++R+  G + E HG       T+G DF  K + + D +V+LQ+WDT G E +R++   Y  +A+GVI+ YD+ ++++   L+  WV  V  +      ++L+GN+ D  +  + ++       + + E +  Q+ ETSAK   NID V F++  E+   R++  R+       V+R  SGRK  S +
Sbjct:   77 KIVLIGDCGTGKTCFVQRFRFGTFNETHG------STIGVDFSMKTVLIDDKKVKLQIWDTAGQERFRTIRQSYYRSANGVIVVYDITKRSTFLSLQH-WVEEVRRYTSSHVLLVLVGNRCDLEHLREVEKEEAEALRQYLPEVL--QVVETSAKENTNIDFVFFYLASELK--RRHENRQISTKEDEVVRLGSGRKLSSCS 267
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: A0A7S2KFM0_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KFM0_BIGNA)

HSP 1 Score: 110 bits (274), Expect = 1.420e-23
Identity = 68/196 (34.69%), Postives = 108/196 (55.10%), Query Frame = 2 
Query:  302 RVVLIGACDTGKTCFLRRYLEGYYAEHGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHA-PGTCRVLLLGNKADHPYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNIDVVGFHIIHEILHHRKYSARETVPGGGTVIRSGRKQ 886
            ++VLIG    GK+C L R+ +  +      D Y  T+G DF  + L++    V+LQ+WDT G E +R++ S Y   ADG+I+ YDV  + S   +   W+  VD  A   TC+ LL+GNKAD       +R +T  +A+ +A+ ++ Q  ETSAK   N+      +  E++  RK + R+T+    T + SGR++
Sbjct:   28 KLVLIGDSGVGKSCLLLRFADDSFT-----DSYISTIGVDFRFRTLKINKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSEESFNHVDE-WLNEVDRFANENTCK-LLVGNKADLVK----ERKVTADSARALAQRLNVQFLETSAKTSTNVTTAFQTMAEELIATRK-NVRKTLASDITKLSSGREE 211
[Close]
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Match: B4J201_DROGR (GH15503 n=8 Tax=Drosophila TaxID=7215 RepID=B4J201_DROGR)

HSP 1 Score: 110 bits (274), Expect = 1.500e-23
Identity = 59/161 (36.65%), Postives = 91/161 (56.52%), Query Frame = 2 
Query:  302 RVVLIGACDTGKTCFLRRYLEGYYAE-HGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYRSVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLGNKADHPYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNID 781
            ++VLIG C TGKT  L+R+  G Y E HG+      T+G DF  K +EV   QV+LQ+WDT G E +R++   Y  A +GVI+ YD+ ++A+  +L+  W+  V  +      ++L+GNK D     + D    RQ  + + E +   + ETSAK   N++
Sbjct:   23 KIVLIGDCCTGKTSILQRFKTGNYVERHGN------TIGVDFSMKTIEVEGKQVKLQIWDTAGQERFRTITQSYYRANNGVIIVYDITKRATFANLQK-WIEEVRRYTASNVLIILIGNKCDLEEEREVDFEEARQMCQYIPEILF--VMETSAKENTNVE 174
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1053.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKI8_ECTSI6.640e-7247.02Divergent RAB-like GTPase, N-terminal myristoylati... [more]
A0A835YYU6_9STRA2.220e-2948.78P-loop containing nucleoside triphosphate hydrolas... [more]
Q3SD05_PARTE2.200e-2630.05Rab_A48 protein n=2 Tax=Paramecium tetraurelia Tax... [more]
UPI001BB1E8723.290e-2535.75ras-related protein Rab-15-like n=1 Tax=Lytechinus... [more]
A0A6J2T9V8_DROLE3.220e-2434.71ras-related protein Rab-43 n=1 Tax=Drosophila leba... [more]
A0A7M7NNG3_STRPU7.890e-2434.41Uncharacterized protein n=2 Tax=Strongylocentrotus... [more]
A0A7S4Q6D0_9DINO1.180e-2335.19Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
UPI0014438C581.190e-2333.66ras-related protein Rab-43 n=1 Tax=Megalopta genal... [more]
A0A7S2KFM0_BIGNA1.420e-2334.69Hypothetical protein n=1 Tax=Bigelowiella natans T... [more]
B4J201_DROGR1.500e-2336.65GH15503 n=8 Tax=Drosophila TaxID=7215 RepID=B4J201... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1053contigA-nodosum_M_contig1053:118556..125974 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKI8
PFAMsDNA_pol_A_exo1,Kelch_4,R3H,Ras
Model size2591
Max annot lvl2759|Eukaryota
KEGG koko:K07874
KEGG Pathwayko05134,map05134
Hectar predicted targeting categoryother localisation
Exons8
Evalue5.52e-75
EggNOG OGsKOG0084@1|root,KOG0084@2759|Eukaryota
Ec32 ortholog descriptiondivergent RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator
Ec32 orthologEc-16_003120.1
DescriptionGTPase activity
Cds size1809
COG categoryS
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1053.12.1prot_A-nodosum_M_contig1053.12.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1053 119286..125922 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866433.9027114-UTR-A-nodosum_M_contig1053:118555..1192851680866433.9027114-UTR-A-nodosum_M_contig1053:118555..119285Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1053 118556..119285 -
1680866434.0824044-UTR-A-nodosum_M_contig1053:125922..1259741680866434.0824044-UTR-A-nodosum_M_contig1053:125922..125974Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1053 125923..125974 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866433.9197154-CDS-A-nodosum_M_contig1053:119285..1201821680866433.9197154-CDS-A-nodosum_M_contig1053:119285..120182Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1053 119286..120182 -
1680866433.9321737-CDS-A-nodosum_M_contig1053:120544..1206471680866433.9321737-CDS-A-nodosum_M_contig1053:120544..120647Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1053 120545..120647 -
1680866433.9402392-CDS-A-nodosum_M_contig1053:121297..1214431680866433.9402392-CDS-A-nodosum_M_contig1053:121297..121443Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1053 121298..121443 -
1680866433.9521344-CDS-A-nodosum_M_contig1053:121713..1218601680866433.9521344-CDS-A-nodosum_M_contig1053:121713..121860Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1053 121714..121860 -
1680866433.9616525-CDS-A-nodosum_M_contig1053:122275..1223711680866433.9616525-CDS-A-nodosum_M_contig1053:122275..122371Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1053 122276..122371 -
1680866434.0491302-CDS-A-nodosum_M_contig1053:122754..1228211680866434.0491302-CDS-A-nodosum_M_contig1053:122754..122821Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1053 122755..122821 -
1680866434.0598395-CDS-A-nodosum_M_contig1053:123199..1233251680866434.0598395-CDS-A-nodosum_M_contig1053:123199..123325Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1053 123200..123325 -
1680866434.0709808-CDS-A-nodosum_M_contig1053:125695..1259221680866434.0709808-CDS-A-nodosum_M_contig1053:125695..125922Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1053 125696..125922 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1053.12.1

>prot_A-nodosum_M_contig1053.12.1 ID=prot_A-nodosum_M_contig1053.12.1|Name=mRNA_A-nodosum_M_contig1053.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=603bp
MGQVASCYASRCCCCRCSFWRRLSHTTSRESHEHHELRLLKPSFEASRKA
REREAGKYSLIKKTYHPHLRGLGDDINRLNQVVRVVLIGACDTGKTCFLR
RYLEGYYAEHGHHDDYRRTLGADFGRKLLEVADHQVRLQMWDTGGSEAYR
SVISHYLHAADGVILCYDVNRKASLEDLKTTWVPFVDEHAPGTCRVLLLG
NKADHPYSEDGDRSLTRQAAKRVAEAIDAQLFETSAKLGHNIDVVGFHII
HEILHHRKYSARETVPGGGTVIRSGRKQLSLALRDVTMDASDRYGSPPSS
CEKKSDSLPKTSSSDDTATRGRTSNRSSFDSCERDDKDDGDDSDLRWIWP
SDISQFTRDAKDYRHHYDDSGHGGTSGGGDGGGGGGDYSSCKYVLGEDGI
EIELSLKNGAKVSQRMGSEGTVPARNDLPSFSGTVDPETSSSNGGCSTLR
DQKFGCVTSEEYCLDKLAAGVSRGGVNPINKALSTTVHGCYAEHHNGVRK
SGRSALLKPIKIHSTVRKSFQKPSLSLVATVPPLKSPDVVSKKESKLGPL
IRSPPTPQSSYDCVTTADEFETSSLSDTCSPTRGKLSAASEHGPRYKQTN
GC*
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mRNA from alignment at A-nodosum_M_contig1053:118556..125974-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1053.12.1 ID=mRNA_A-nodosum_M_contig1053.12.1|Name=mRNA_A-nodosum_M_contig1053.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7419bp|location=Sequence derived from alignment at A-nodosum_M_contig1053:118556..125974- (Ascophyllum nodosum dioecious)
CGGTTCGCAACCCACGGGAGTGACACACGAGGACATCGCACGCCACAGGA
AAATGGGTCAGGTCGCCAGCTGCTATGCCTCGCGCTGCTGCTGCTGCCGG
TGTTCATTTTGGAGAAGACTCTCTCACACAACTTCCAGAGAATCACACGA
GCACCATGAATTGAGGCTTCTCAAACCCTCGTTTGAGGCGTCGCGAAAAG
CGCGCGAACGAGAGGCTGGGAAATATTCTTTGATAAAAAAAACATACCAT
CCCCACCTGCGAGGGCTCGGCGACGACATGTGAGGCAACGCCATTGGTTG
AGCTTCGTTTGAAAGCGGATTGTTTGAGCAATACATGACTACGACGGTGT
ACTAGTGTAGGTTCCTCGAGGCAGTTCTCCAACAAAGACGCACGGAAGAA
TGTAAAAATAGTCTTACACAAAAGAGCTGCTCATCACACTCGAAAACAGC
GTGATTTAGTTGCAGTTGATCCAAAAGTCTGCAGTACAGTGAGTACTATT
ACAATACAGTAACCTCACCGTAAAAAAAATACCCCCAAGCAGTGCACGAA
ACCACAAGGAAATAAAGACAAGGTTATACAATAATTTCACGTGTACAGAG
TACCCACTGCAGATATATATTTGTATACTATTATCATTGTATATGTGTAT
GTATGTATTATCATGTATGTGTATGTATGTATGTATGTATGTATGTATGT
ATGTATGGTCATCAACATAGCAGAGTATGGATCAACCGGGTAAGGTTACC
AATCCTGCTCGTGGTCAACTGAACAGGGAAAATTAATATTTCCCTGTCCC
CGCTCGCGCCTGAGAATGTACGACTTTAAAACGCTCGCGGACGGCCGTTA
ATTGTTAATTGTCACCTTTTGTTTCCAGCACGCGTAGGTGTTGTGTAGAT
TCCCGTTCGGAATGACGGGAGAGCAGCAGCGCCACATTCACGACTTTTGG
CAACAACACATGTAAGATCTATGGTCACACGGGGACGCGAACGGACAGCT
GCGTGTGTGTCTGACTCCTTTTGTTCCCACTAATAGTACTGCACATTAAG
TTATAGTTAAATTACGATAGCTGGAAAACATTGAGTGAGCTATATGAACC
AATCGACGCTGCTAGTGATTTGTTTATTAATATTACTGCTGTGTAACCAT
GAACTTACAAAAGCTACGTCGATCGGAGGGTTCTATAACCCTTGATGCAC
CCCGGGGTTGCTATACCTATTATCAGCGTGGTCATCCGAAGTGATACCCC
GCGCGATAATTTCTGTTTTCACCTCACTTCAAATCCGATGGAGGCGTCAG
TCAGCGCTGACCGATAAAGAACAATGTTGTACATCTCGTGCCCTCTCCCT
CCGAAACCCGGTTTCGGGGTATGAGTGTGGGAGGGTCTTTCCGGCGGGTG
TAGGGCCGGGCTCACCCTCAAGAGATGCAGCCGACTGGCTGCCTTCGCGA
TTCAGCCTGTCGGTTGAGACGCGGCGGCGGTATGGTTGACTGAGGATGGT
GTTCCCAGGTGCGCGCCTCTTCCGAGCCCCAAGTTGGTGCCCTTCGGGAG
GGTGGCGGCACGCGAGAGGCAGGGAGCACTGTCGCGGAGAGCCTGGTAGT
GCTCTATCGGGTGGGTGCGCCCCAGATTCAGCGAAGGCGGAGGGAAGCTC
GATCGTCGACGAGCCAGGGGAGGGCTGAACCCCTGTGCGCGAGAATCACA
GGCTTGAACCGGGATGTTTCTGAGGGAAAAGCTGATGTCTGACCACGGTC
ATTTTTCTTCCTACGAGGGCCACAAGGAGCGGCGAACGGGCAAGATTCGT
GGGGCTTTTTCAAGGATGCTCAGAGCTTTGGACGGCTGGATGCTGGCTCG
CGCGCCGGCTTCACCAGCTCAAGGCCTCCACCACCATGGACCTCGGTATT
TTAATTTTAATTTTTTCTGTACAGTGTGTGGCCTTGAGAAACTTGGACTT
GTTGATCAAAACTGGTTGGAGCGTAATTTTTCCGTTTTTTTGCTGAGAAC
GCAAGTCGTGGGTAGGCGACAACATTCCGAGTCGATCGAGGTTGCTCCCG
ATATGGAGTAAGGAGGTTTGATGAACGGTTTTGATATTGGTCGGTGTCAT
TGCTTGTAGAGCCGCATAACTTTTTGTCGCGATTTGGATCCCTGTTGGTC
TGAGTAGCAGGTTGTCACCATGATGTGACCCGTTGACCTTCTTCGTATTT
CTTTGTGACCACAAGCGGGATTGGCATTTGATAGCAGGTCTATGGCTGAC
TTGTTGTGTCACCGTAGTTTCTTCAGTTGCAAGGACAATACGCTGAATGT
GTGAATCAACAGCAACAACAACAACAACAATGTAAATAGCTCTCTCGGTG
GTAATTGGAGTTTATTTGGTTTGATGGTGAAACTTAAACTTACACGACGA
CAGGACCTAACAGGGGAAACCCACTACTACCCATAATACGTGGTACTCGA
TAGTTCTGCTGTATGAGAGAAAGAGACAAAAAACAACACATCTTGCCTCA
TAATCGTACAAGCCCGATTTTATGCTATTTGCTACCTATAATTTATATGG
TCGTTCTTTCTTGGGCGCTACAGGGGGGGCGGGGGTTGCTTGTAACTAAC
TGTGCTGTTTTTTGCTGTTGATTTTCGTTCTATCTTAACAAACAAGCAGC
AATCGGTTGAATCAAGTCGTCAGGGTTGTCCTCATTGGTGCGTGCGATAC
GGGCAAGACATGCTTCCTCCGTCGATACCTCGAAGGATACTACGCCGAAC
ACGGCCACCACGATGACTACAGGAGGCAAGAGCAAACTCCGCGGGAACAA
GCCCAAATACACACCAGTAATGGAGTGCTCGTACTTTATGTCGGGATATT
CGTAGCTCTGCGAGTACAGCGAATGATATCAAGAGGAATACACAAAATTC
CACACCATACGGTATGCACTCGTACAACGGGATGCGTTGAATCCTTTCAA
GCCAGTCCACGGGCTTTTTTTTGCCGTTACGTACCAGGTACACGTTTTTT
TCGTCAGTGAAAGAGCGCCCTAAGGTGCTTCTATTAATAATAGTATAATA
GTGTTGTTATTAGTCTCGAAAAGGTGGTGCTCACACACTTTTTTTTCTTC
TTCTTCTTCTTACTTAAGTTCCACGTTTCTCTGTGCCTGATTTTACATCA
CAGGACCCTTGGCGCCGACTTCGGCCGCAAATTATTAGAGGTCGCCGATC
ATCAAGTGCGCCTACAGATGGTGAGAATAGGGTGTAGAAATGACCCGAGA
AACCGTACGGGTTAATCCAGACCGTTCTCTTCCGTTCTCTTCCCACAAAA
CGATGAGAATTTTGCTCGCGGTGACCAAGCAAGGAAGACCATCAGAGGAG
GGCTAGAGTTCAAGGACGGAAGAAGCTAGGCGATAAAATCTCAACTGCGT
GCTATCGTAGCTAAATGACACGACAAAATTGTCTGCCCATTAGGAAAAGG
GGGCCTGGGTTGAACTATGAACGTCCGGTAACACACCAACCAATCTGCAT
CGCACACCAGAGGAAGTACGGTTTGGGTGACTTTATGCAACAACAGCGAA
GTGAATTCCTCCCTCCTGCAATTGAACACCTTTCCTGCGCGCGGCATGAA
TAGTGGGACACCGGTGGAAGCGAAGCGTACCGCAGCGTGATTTCGCACTA
TCTTCATGCAGCGGACGGGGTCATACTGTGCTATGACGTCAATCGAAAGG
TATTGCATGAATGCCCAGGCTTTTCCCCGAAGAAAGTTGCGTGAGAGCTA
GAACTAGCTACTCTAGGTCACAGAAGCTTGGGGAGAGAAAGCGCGGACTT
GACGAGACCGTTGACCTACGCGATTTTAGTCTCGTTATGCTCACGGAGGC
CCGCTCTACCCTCACGGGCAGAAGCGGAGAGCTTGGTGGTTTGCGTCAAT
CCAAGTGCGGCCGCGAAAACTACCAAGCACGTAAACGTGTTTCGAATCAC
CTGAAAGCTTGTCCGACGAATCTTAAGCTTTCTTCCCCGCTTTCCTTTTC
CTAAGATCGCCATAATGCCCTCTTGTCGCACAAAGACTCCGTCGATTCAC
CCAGAAGCGAGCTCCTATCCTTTCACCCGTATACCACTGCCCCGACTCTT
GCTCGGGACTGGAGGCGTCGCTAGAAGATCTTAAGACAACATGGGTACCG
TTTGTGGACGAGCACGCGCCGGGAACATGCCGTGTCCTGCTGTTGGGGAA
CAAGGCCGATCACCCTTACAGCGAAGACGGTGACAGAAGCCTCACCCGGC
AGGCAGCAAAGGTAGGCAAAATTAAGAACTTACTGCGGCCACCCATTTCT
CTAGGGGGCATACGGAAATAGGGCCAGTAAAAGTCCGTGGTAGTCGCATG
AATATGTACCATCTCCGAGCCGATTGACTCTTTTGTCTATTCTGCACGCC
CGCCGCACGTGAGCGAGCGGACGTTTGTCCCCATGATCGTAACATCCTTA
TGGACAACCGCCTATTTATGTATCTGAGATGCCCAGTTCCACCCCGAAGT
GATGGGACGGTCCTTATGTGATTTGCTGCAGAGAGTCGCGGAAGCAATCG
ACGCGCAGCTGTTCGAGACCAGCGCGAAGCTCGGTCACAACATCGACGTC
GTGGGTTTTCATATAATTCACGAGATTCTGCATCACCGGAAATACTCTGC
GAGGGAAACAGTGCCAGGAGGCGGCACGTGAGAACAGCGTCAAATGCGTG
CCGGAATGTGTCTTACGATTATTGATATAGGGGGGGGGATTGTCCCGCGA
TTGTCACGCAGAGTCTTCGTTGGTTACTTGTGCTCTAGGCAACTCTTTTA
CGGGTGCACTTTTAATATAGAAGGCATGGTGGGGCGAATGCCTCGGAGAA
TCTTTGTTGTTGTTTTTTTACTCTAGGTAACGCTTTTTGCGGGCACACTT
TTAGTAGTTAGTAGCAGGCACAGTGGGGGCCTCGGTTTTATGAAGTTGTA
GGAGCTCCTCCCAAAGCTTCACGTCCTTTTACCACTTACTAGTATGATAT
TAACAGTAAAAGGATGCATCTTCCCGGGGTAGTAATGCAGTTGTCGTCAA
CTACATACTCCGTACAAGGTTCCAAGGTTGGTGTCATGTCTGACTTTGAC
CCAACCCGACTGTAACCCTAACCCTAACTCAACCCCAACCAGACAAAAAC
TTGGCTCTTTGCCCGCTGGGAGGGATACATTTCTAGTATTTTTGTACGAA
GTGGTAAAAAGTCTGTTGAACACGTTGAGTCCTCAGCGAGAGACCGAAAA
CGAACGCGGCACTTCAAGATCCTCCGTGTGCGGTCAACACTCTTCGGTGC
ATGATCTGTCTCGCTACGCTCGATCAGCGTGATTCGATCCGGGCGAAAAC
AGCTCTCGCTTGCTCTTCGAGACGTGACAATGGACGCCAGCGACAGATAT
GGCTCTCCTCCCAGTTCTTGTGAAAAGAAGGTGAGAAGATGCGTTATTAA
CTGTCAAATATTATTTGTGATTTGTGTGTCGTTTCTTGTTGCACTATGTA
TTACATTGTTTTGTCTTAGTGTGCATATTATCTTGGGATGCTTACTCCCC
AGCTCATCATTGACGGGTCGTGACCATCGCATTCGTGACCAGCCCACCAA
CTGCCGCCGACGCAAAAGTTCAAGGGCGTTGCTGTTGCGTACGTGGTGCT
GCTCGCTTTGCTTTGAGCCTCTAAGGCAGCGCACGCCACGTGAATGGTCA
AACCTCAAGTGCTTTCGTGTCTGACAAACTCGAATGCCCGCATCGGGCAA
ACCGCAATAATCCACGGAACATATCGCCATCGATTCACTTAGAGTGACAG
TTTGCCGAAGACGAGCAGCTCCGATGATACAGCGACGCGCGGGCGTACTT
CGAATCGATCCAGCTTCGACTCTTGCGAACGCGACGACAAGGATGATGGG
GATGACAGTGATCTGCGCTGGATTTGGCCGTCCGATATCAGCCAATTTAC
CAGGGATGCCAAGGACTATCGACACCACTACGACGACAGTGGTCATGGTG
GCACTAGCGGCGGGGGCGATGGAGGCGGCGGGGGCGGCGACTATAGTAGC
TGTAAGTATGTCCTTGGTGAAGATGGAATCGAGATCGAGCTAAGCTTGAA
AAACGGCGCCAAGGTTTCCCAGAGGATGGGTAGCGAGGGCACGGTGCCTG
CCAGAAATGATCTCCCAAGCTTCTCGGGAACGGTAGACCCAGAGACGTCC
TCCTCGAATGGTGGTTGCAGTACCCTGCGTGATCAGAAGTTCGGTTGTGT
TACCTCTGAAGAGTATTGCTTGGATAAACTTGCTGCAGGAGTCTCCCGGG
GCGGGGTTAACCCCATAAATAAAGCGTTGTCGACCACAGTGCACGGTTGC
TATGCAGAACACCACAACGGCGTGAGGAAGTCAGGGAGATCGGCTCTGTT
GAAACCCATCAAAATCCATTCCACGGTGCGCAAGTCATTCCAAAAGCCTT
CGTTATCTTTGGTTGCCACGGTTCCACCGCTCAAGAGCCCCGACGTGGTG
TCAAAAAAAGAGAGCAAGCTTGGACCCCTTATAAGGAGCCCGCCGACGCC
GCAAAGCTCGTACGATTGCGTGACCACGGCGGATGAGTTTGAGACTTCTT
CGCTATCGGACACCTGTTCGCCCACGCGAGGAAAATTATCTGCCGCCTCC
GAGCACGGGCCCCGCTACAAGCAGACCAACGGATGCTGAAAGCGCGACTG
TTCCGTGAGAGCCCTGCCCTTTTCGACGCAAGATTAGCAAAGATAACTGT
CGATAGAGGCGAGCGTGTGGGTTATTAAGGAGCACGACTCAGGCTTGAGG
CAATGTTTTTGACCCTGGGCCCGCTGACTTACGAGATGACATGGTGGGGA
AACACATTCACTCGATCGCTTCTGCTGTAAGATCTTTGGAATAGTGAAGG
CATGTTGTTTGCGTTCAACTCACGTGGTGTGTGTTCGTTATGAATCCTAC
GCGTGCAATATGAATTACAAGGCCGAAGAAAGACGTGGCCGGAGATAGAT
GTGGCCATGTTAGGGAGCAAACGAGAGGATTTGGGTCCCACTGCTTGTTT
TGTTGCCACAACTTGTTGCAGGACAAGTGTTGGCCAGACTGTATACACAA
TCAGCTCGTCTTTGTGAAAATGTGCTGAGTTTCTGATAACAGTCTTTGAA
CTTCAGGGCCGTTTTTTGCTTTTGAGTCACCTTCTCGCGTGCCGGTACGT
TGTTGGTGTTTTTCTAGGCAGGTGGTAAGGCCTCTCGTCGAATGGTACGG
TACGTGCGCAGTAACAATCCATAACACTAGAATAGAGGGATTACCCCGTA
TGTTGATTTCATCAGCGTTTATTAATAGAACATACCAGTAATACGTGGAC
ACCGAACGAGTGGGAGCAAAGACGGGTCGCGTTGCTAAGAACCAGCAGGC
GAAAATTGGAACGATCGGG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1053:118556..125974-

>mRNA_A-nodosum_M_contig1053.12.1 ID=mRNA_A-nodosum_M_contig1053.12.1|Name=mRNA_A-nodosum_M_contig1053.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1809bp|location=Sequence derived from alignment at A-nodosum_M_contig1053:118556..125974- (Ascophyllum nodosum dioecious)
ATGGGTCAGGTCGCCAGCTGCTATGCCTCGCGCTGCTGCTGCTGCCGGTG
TTCATTTTGGAGAAGACTCTCTCACACAACTTCCAGAGAATCACACGAGC
ACCATGAATTGAGGCTTCTCAAACCCTCGTTTGAGGCGTCGCGAAAAGCG
CGCGAACGAGAGGCTGGGAAATATTCTTTGATAAAAAAAACATACCATCC
CCACCTGCGAGGGCTCGGCGACGACATCAATCGGTTGAATCAAGTCGTCA
GGGTTGTCCTCATTGGTGCGTGCGATACGGGCAAGACATGCTTCCTCCGT
CGATACCTCGAAGGATACTACGCCGAACACGGCCACCACGATGACTACAG
GAGGACCCTTGGCGCCGACTTCGGCCGCAAATTATTAGAGGTCGCCGATC
ATCAAGTGCGCCTACAGATGTGGGACACCGGTGGAAGCGAAGCGTACCGC
AGCGTGATTTCGCACTATCTTCATGCAGCGGACGGGGTCATACTGTGCTA
TGACGTCAATCGAAAGGCGTCGCTAGAAGATCTTAAGACAACATGGGTAC
CGTTTGTGGACGAGCACGCGCCGGGAACATGCCGTGTCCTGCTGTTGGGG
AACAAGGCCGATCACCCTTACAGCGAAGACGGTGACAGAAGCCTCACCCG
GCAGGCAGCAAAGAGAGTCGCGGAAGCAATCGACGCGCAGCTGTTCGAGA
CCAGCGCGAAGCTCGGTCACAACATCGACGTCGTGGGTTTTCATATAATT
CACGAGATTCTGCATCACCGGAAATACTCTGCGAGGGAAACAGTGCCAGG
AGGCGGCACCGTGATTCGATCCGGGCGAAAACAGCTCTCGCTTGCTCTTC
GAGACGTGACAATGGACGCCAGCGACAGATATGGCTCTCCTCCCAGTTCT
TGTGAAAAGAAGAGTGACAGTTTGCCGAAGACGAGCAGCTCCGATGATAC
AGCGACGCGCGGGCGTACTTCGAATCGATCCAGCTTCGACTCTTGCGAAC
GCGACGACAAGGATGATGGGGATGACAGTGATCTGCGCTGGATTTGGCCG
TCCGATATCAGCCAATTTACCAGGGATGCCAAGGACTATCGACACCACTA
CGACGACAGTGGTCATGGTGGCACTAGCGGCGGGGGCGATGGAGGCGGCG
GGGGCGGCGACTATAGTAGCTGTAAGTATGTCCTTGGTGAAGATGGAATC
GAGATCGAGCTAAGCTTGAAAAACGGCGCCAAGGTTTCCCAGAGGATGGG
TAGCGAGGGCACGGTGCCTGCCAGAAATGATCTCCCAAGCTTCTCGGGAA
CGGTAGACCCAGAGACGTCCTCCTCGAATGGTGGTTGCAGTACCCTGCGT
GATCAGAAGTTCGGTTGTGTTACCTCTGAAGAGTATTGCTTGGATAAACT
TGCTGCAGGAGTCTCCCGGGGCGGGGTTAACCCCATAAATAAAGCGTTGT
CGACCACAGTGCACGGTTGCTATGCAGAACACCACAACGGCGTGAGGAAG
TCAGGGAGATCGGCTCTGTTGAAACCCATCAAAATCCATTCCACGGTGCG
CAAGTCATTCCAAAAGCCTTCGTTATCTTTGGTTGCCACGGTTCCACCGC
TCAAGAGCCCCGACGTGGTGTCAAAAAAAGAGAGCAAGCTTGGACCCCTT
ATAAGGAGCCCGCCGACGCCGCAAAGCTCGTACGATTGCGTGACCACGGC
GGATGAGTTTGAGACTTCTTCGCTATCGGACACCTGTTCGCCCACGCGAG
GAAAATTATCTGCCGCCTCCGAGCACGGGCCCCGCTACAAGCAGACCAAC
GGATGCTGA
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