mRNA_A-nodosum_M_contig105.90.3 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: A0A6H5KX02_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX02_9PHAE) HSP 1 Score: 239 bits (610), Expect = 9.840e-77 Identity = 126/202 (62.38%), Postives = 156/202 (77.23%), Query Frame = 1
Query: 103 LILWTISSVNAFTG-VVLHARTAASRTPD---RSMFMSPPSSVSKSRRAVVREAGAVLGGVIGSTFLPTGTLAATKTQ--RKVFTTDGGVKFIVLKEGEGPLARDGDFCVVEFTGFLPDGSVFDASNSPGRKPVAFKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIENGECLIKPGMDVRYDLKLQRIAP 690
++L + NAFTG V A + + D + SP + + +RR V++ A A + G++ S LP G LAA K + R+VFTTDGGVKFIVLKEG GP+ARDGDFCVVEFTGFLPDG+VFDASN+PGRKP+AF+LG VIKGWEEVLR MN AGA+VQMVVPA++AFGDKGICI+NG+CL+KPGMDVRYDL+L+R+AP
Sbjct: 9 IVLSAAAGCNAFTGGPVTGAASLRQKKVDAVSKVAAASPRAGLDGTRRDVIQTASAAVAGLLSSAVLPAGALAAAKAEPNRRVFTTDGGVKFIVLKEGTGPVARDGDFCVVEFTGFLPDGAVFDASNAPGRKPIAFQLGKRQVIKGWEEVLRLMN-AGAEVQMVVPADMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAP 209
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: A0A6S9M8W0_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8W0_HETAK) HSP 1 Score: 165 bits (418), Expect = 5.930e-48 Identity = 76/128 (59.38%), Postives = 104/128 (81.25%), Query Frame = 1
Query: 304 LAATKTQRKVFTTDGGVKFIVLKEGEGPLARDGDFCVVEFTGFLPDGSVFDASNSPGRKPVAFKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIENGECLIKPGMDVRYDLKLQRIA 687
+AA K + ++ TT GGVKFI +K+G GP R GD C+V++TG+LPD +VFD+S++PGRKP+AFKLGA VI GWEEVL M+ GA+VQ VVPA LA+G KG+C+++GECLIKP D+++D+KL+R+A
Sbjct: 60 VAAAKQKPEIETTPGGVKFIFIKQGSGPNPRKGDICLVDYTGYLPDNTVFDSSDAPGRKPLAFKLGARQVIPGWEEVLPYMS-VGAEVQAVVPAKLAYGSKGVCLDSGECLIKPDTDLKFDIKLKRVA 186
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: A0A7S2UZW0_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZW0_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.540e-47 Identity = 85/165 (51.52%), Postives = 115/165 (69.70%), Query Frame = 1
Query: 202 SPPSSVSKSRRAVV--REAGAVLGGVIGSTFLPTGTLAATKTQRKVFTTDGGVKFIVLKEGEGPLARDGDFCVVEFTGFLPDGSVFDASNSPGRKPVAFKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIENGECLIKPGMDVRYDLKLQRIAP 690
S P ++S+ A V R+ L V+G L + LAA KV TDGGVKF+ +K+G GP R GD+C+V++ G+L DG +FD+S PGRKP+AFK G VI GWEEVL M +AG +V+MVVPA+LA+G KGIC+E+GECLI+P +++YDL L+R+AP
Sbjct: 27 STPLMKAQSKFAAVSRRDFATGLVSVVGGVALASPALAA----EKVIETDGGVKFVEVKKGNGPRPRRGDYCIVDYVGYLSDGRIFDSSTGPGRKPLAFKFGGKQVIPGWEEVLPYM-KAGGEVKMVVPASLAYGSKGICVEDGECLIQPDEELKYDLTLKRVAP 186
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: A0A7R9YBJ8_9STRA (Peptidylprolyl isomerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBJ8_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.980e-42 Identity = 79/143 (55.24%), Postives = 103/143 (72.03%), Query Frame = 1
Query: 280 STFLPTGTLAATKTQRKVFTTDGGVKFIVLKEGEGPLARDGDFCVVEFTGFLPDGSVFDASNSPGRKPVAFKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIEN----GECLIKPGMDVRYDLKLQRIAPAF 696
S F+P ++A K++TTDGGV+F V KEG GP AR GDF VV+F G+ DG VFD+S + GRKPVAF++G G VIKGWEEVL +N AG++VQM VP+ LAFG+KGIC+E ECL+ PG V+Y L +++IA A+
Sbjct: 48 SCFVPAASVAKGP---KIYTTDGGVEFAVTKEGSGPPARAGDFVVVDFIGYKADGKVFDSSTTQGRKPVAFRMGQGQVIKGWEEVLERVN-AGSEVQMRVPSALAFGEKGICVETPQGKDECLVLPGETVKYQLFVRQIAGAY 186
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: A0A835Z9V0_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V0_9STRA) HSP 1 Score: 131 bits (330), Expect = 8.310e-35 Identity = 71/168 (42.26%), Postives = 103/168 (61.31%), Query Frame = 1
Query: 190 SMFMSPPSSVSKSRRAVVREAGAVLGGVIGSTFLPTGTLAATKTQRKVFTTDGGVKFIVLKEGEGPLARDGDFCVVEFTGFLPDGSVFDASNSP--GRKPVAFKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIENGECLIKPGMDVRYDLKLQRIA 687
S F+S S S SRR V++ A G + LP+ AA + KV+ TD G+ ++V KEG GP RDGD +++ G+L +G FD ++ GRKP FKLGA VI WEE++R MN GA+ +VVPA L +GDKG+C+ +GECL+ P +++ + L ++A
Sbjct: 19 SAFVSMSSGPS-SRRQVIQTGVAAAGAAL----LPSVVSAAAPAKAKVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNP-GAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVA 180
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: A0A8J2WS77_9STRA (Peptidylprolyl isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WS77_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.750e-34 Identity = 68/162 (41.98%), Postives = 102/162 (62.96%), Query Frame = 1
Query: 244 REAGAVLGGVIGSTFLPTGTLAATKTQ-RKVFTTDGGVKFIVLKEGEGPLA-----------RDGDFCVVEFTGFLPDGSVFDASNSPGRKPVAFKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIENGECLIKPGMDVRYDLKLQRIAPA 693
R+ GA LGG +T P LA K V TT GG K++++KEG PL R + +++TGFLP+G VFD++ G KP++F+LG V+ G E+V+ M + G +VQ ++PA+LA+GDKG+C ++GECLIKPG +++Y ++L R+A A
Sbjct: 23 RDVGAFLGGAALTTLAPRPALADVKVDPNSVRTTKGGAKYVIVKEGSCPLIDPSGALGSCYPRPESYITIDYTGFLPNGQVFDSTEKKGGKPLSFRLGERQVVPGIEQVVAQM-KPGEEVQALLPASLAYGDKGVCTDDGECLIKPGTNLKYFIRLNRVAAA 183
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: W7U710_9STRA (Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U710_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.460e-33 Identity = 69/174 (39.66%), Postives = 101/174 (58.05%), Query Frame = 1
Query: 223 KSRRAVVREAGAVLGGVIGSTFLPTGTLAATK-------------------TQRKVFTTDGGVKFIVLKEGEGPLARDGDFCVVEFTGFLPDGSVFDASNSPGRKPVAFKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIENGECLIKPGMDVRYDLKLQRIA 687
K + VR G++G+ L TG AT K+ T GVK++ +K GEG R GD+ ++ + G L DG++FD + PG+KP+AFK+GA VI G EE L +M QAG + Q++VPA+LAFG+KG+C E GECL+ P +V+Y++ L+R+A
Sbjct: 39 KEKGVAVRREAVGFTGMLGAVALATGGSTATTLAWPLQVLAEESPVKVRKVNPNKIRETPNGVKYVDVKVGEGESPRGGDYVIITYIGQLSDGTIFDGLHGPGKKPLAFKIGAKQVIPGLEEALLSM-QAGGERQLLVPADLAFGEKGVCTEKGECLVPPNTNVKYNVILKRVA 211
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: A0A7S2YCW6_9STRA (Peptidylprolyl isomerase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YCW6_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.180e-32 Identity = 65/153 (42.48%), Postives = 103/153 (67.32%), Query Frame = 1
Query: 229 RRAVVREAGAVLGGVIGSTFLPTGTLAATKTQRKVFTTDGGVKFIVLKEG-EGPLARDGDFCVVEFTGFLPDGSVFDASNSPGRKPVA-FKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIENGECLIKPGMDVRYDLKLQR 681
RRA + ++ A GG + ++ LP AA + + T DG +K+ L+ E P ++ GD +E+TG+L DG++FDA+++ G+K + F+LG GV+ G E+++ M G +VQ ++PA+LAFGDKG+CIE+GECLIKPG + YD++L+R
Sbjct: 31 RRAFMAKSAAAFGGAVIASALPQQAQAAPQI---LTTADGKIKYATLQPARERPSSQSGDIVAIEYTGYLTDGTIFDATHAEGKKNILMFQLGGNGVVPGVSEMVQEMG-VGQKVQAIIPADLAFGDKGLCIESGECLIKPGATLVYDIQLKR 179
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: A0A7S2FVU9_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FVU9_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.760e-31 Identity = 66/159 (41.51%), Postives = 97/159 (61.01%), Query Frame = 1
Query: 250 AGAVLGGVIGSTFLPTGTLAATKTQRKVFTTDGGVKFIVLKEGEGPLA-----------RDGDFCVVEFTGFLPDGSVFDASNSPGRKPVAFKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIENGECLIKPGMDVRYDLKLQRIAPA 693
AG +L GV + T + + TT GGVK+ V+K+G+ P A + G C+++FTGFLPDGSVFD++ G KP+AF+LG VI G E+V+ M + G +VQ +P+ LA+G KG+C +GECLI P D++Y ++L+R+A A
Sbjct: 59 AGVILPGVANA--------EQTISPNAIRTTKGGVKYAVVKDGKCPTADPTGLAGSCDPKTGSLCIIDFTGFLPDGSVFDSTERKGGKPLAFRLGEKQVIIGIEQVVSQM-RTGEEVQAKIPSELAYGTKGVCTADGECLIPPNTDLKYFIRLKRVAAA 208
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Match: A0A7S3NK27_9STRA (Peptidylprolyl isomerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK27_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.150e-31 Identity = 62/130 (47.69%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 337 TTDGGVKFIVLKEGEGPLA-----------RDGDFCVVEFTGFLPDGSVFDASNSPGRKPVAFKLGAGGVIKGWEEVLRAMNQAGAQVQMVVPANLAFGDKGICIENGECLIKPGMDVRYDLKLQRIAPA 693
TT GGVK+ +LKEG P A G FC+V++TGFLP G+VFD++ S GRKP+AFKLG VI G E+++ M + G +VQ ++PA LA+G+KG+C E+ +CLI P D++Y ++L R A A
Sbjct: 70 TTKGGVKYRILKEGACPTADPLGLAGSCTPTQGSFCIVDYTGFLPSGAVFDSTESKGRKPLAFKLGEKQVIVGIEQLVSQM-KPGEEVQALIPAELAYGEKGVCTEDKDCLIPPNTDLKYFVRLVRTAAA 198 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.90.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig105.90.3 >prot_A-nodosum_M_contig105.90.3 ID=prot_A-nodosum_M_contig105.90.3|Name=mRNA_A-nodosum_M_contig105.90.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=233bp PEKVLTVHAPHSRLPVSRSNVLKHAMNFTALRTVLILWTISSVNAFTGVVback to top mRNA from alignment at A-nodosum_M_contig105:885851..891826- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig105.90.3 ID=mRNA_A-nodosum_M_contig105.90.3|Name=mRNA_A-nodosum_M_contig105.90.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5976bp|location=Sequence derived from alignment at A-nodosum_M_contig105:885851..891826- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig105:885851..891826- >mRNA_A-nodosum_M_contig105.90.3 ID=mRNA_A-nodosum_M_contig105.90.3|Name=mRNA_A-nodosum_M_contig105.90.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=699bp|location=Sequence derived from alignment at A-nodosum_M_contig105:885851..891826- (Ascophyllum nodosum dioecious)back to top |