mRNA_A-nodosum_M_contig105.89.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig105.89.1
Unique NamemRNA_A-nodosum_M_contig105.89.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: D7FQE5_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE5_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 5.910e-116
Identity = 177/187 (94.65%), Postives = 179/187 (95.72%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHAASNKVALPPSGGIGVHGRPHGG-GGGGPSGIPGMRTR 558
            MIRGVIIVNNHGKPRLVKFYQTVVGEEAQK VIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVD+QESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQIL AIN+QNRLHAASNKV LPPSGGI  HGRP GG GGGG SGIPGMRTR
Sbjct:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILLAINDQNRLHAASNKVGLPPSGGISAHGRPSGGVGGGGSSGIPGMRTR 187
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: A0A835ZDS3_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS3_9STRA)

HSP 1 Score: 279 bits (713), Expect = 5.500e-88
Identity = 131/157 (83.44%), Postives = 149/157 (94.90%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHAASNKVAL 471
            MI+ V+IVNNHGKPRLVKFY+TV  E+AQ+ VI+RIFQQVAQRPD+FCNYLEG IPEWGEGTKLIYRHYATLYF+FAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDE+IMGGMVLETNIN +L+A+N+Q++LHAAS KV L
Sbjct:    1 MIKAVVIVNNHGKPRLVKFYKTVTDEDAQQSVIRRIFQQVAQRPDNFCNYLEGSIPEWGEGTKLIYRHYATLYFIFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEMIMGGMVLETNINAVLSAVNDQSKLHAASMKVQL 157
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: W7T2Y9_9STRA (AP complex subunit sigma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y9_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.660e-86
Identity = 132/156 (84.62%), Postives = 143/156 (91.67%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHAASNKVA 468
            MIRGVIIVNNHG+PRLVK YQ+V+GEEAQ+ VI+++FQQVAQRPDSFCNYL+G IPEWGEG KLIYRHYATLYFVFAVD QESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIM GMVLETNI  IL  IN+QNRLHA S K +
Sbjct:    1 MIRGVIIVNNHGRPRLVKLYQSVIGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKTS 156
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: A0A6S8ZKR8_9STRA (AP complex subunit sigma n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZKR8_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.560e-83
Identity = 124/152 (81.58%), Postives = 140/152 (92.11%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHAAS 456
            MI+G++IVNNHGKPRLVKFYQ+V  EE Q+ VI+R+FQQVAQRPDSFCNYLEGIIPEWG   KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEI+MGGMVLETNIN +L AI +Q ++H +S
Sbjct:    1 MIKGILIVNNHGKPRLVKFYQSVTSEETQQSVIRRVFQQVAQRPDSFCNYLEGIIPEWGSNIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIVMGGMVLETNINSVLQAIGDQTKMHKSS 152
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: A0A7S2P852_9STRA (AP complex subunit sigma n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P852_9STRA)

HSP 1 Score: 265 bits (678), Expect = 8.710e-83
Identity = 126/163 (77.30%), Postives = 143/163 (87.73%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHAASNKVALPPSGGI 489
            MI+GVIIVNN GKPRL KFYQ+V  EE Q+RVI+R+F+Q++ RPD+FCNYLEGI+PEWG   KLIYRHYATLYFVFAVDAQESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEI+MGGMVLETNI  IL AI +Q +LHAAS K  +  + G+
Sbjct:    1 MIKGVIIVNNQGKPRLAKFYQSVTSEEIQQRVIRRVFEQISSRPDNFCNYLEGIVPEWGSNIKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIVMGGMVLETNIASILQAIQDQGKLHAASLKAKVDKTDGL 163
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: A0A7R9U773_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U773_9STRA)

HSP 1 Score: 261 bits (667), Expect = 6.560e-81
Identity = 130/169 (76.92%), Postives = 144/169 (85.21%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHAASNKVALPPSGGIGVHGRP 507
            MI+ VI+VNNHGK RLVKFYQ V    AQ+ VI+R+FQQV QRPDSFCNYLEG +PEWG+  KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEIIM GMVLETNI  IL AIN+Q+R+H ASNK A P +G     GRP
Sbjct:   14 MIKAVIVVNNHGKARLVKFYQNVDSVSAQQSVIRRVFQQVGQRPDSFCNYLEGSVPEWGDDVKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIIMAGMVLETNIVNILQAINDQHRMHMASNK-AQPGTGNAVGRGRP 181
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: B5YNE9_THAPS (AP complex subunit sigma n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNE9_THAPS)

HSP 1 Score: 259 bits (661), Expect = 2.790e-80
Identity = 123/154 (79.87%), Postives = 138/154 (89.61%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHAASNK 462
            MI+G+IIVNN GKPRLVKFYQ V GE+ Q+ VI+R+FQQV+ RPDSFCNYLEG +PEWGE  KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDK FENVCELDLIFHSD+VHY+LDEI+MGGMVLETNIN IL AIN+Q R+H  S K
Sbjct:    1 MIKGIIIVNNSGKPRLVKFYQNVFGEQRQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGENIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDRVHYILDEIVMGGMVLETNINSILQAINDQERMHNESMK 154
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: A0A8J9T0F8_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T0F8_PHATR)

HSP 1 Score: 254 bits (650), Expect = 5.220e-79
Identity = 118/149 (79.19%), Postives = 134/149 (89.93%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLH 447
            MI+G+IIVNNHGKPRLVKFYQ V  E  Q+ VI+R+FQQVA RPDSFCNYLEGI+PEWG+  KLIYRHYATLYFVFAVD QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHY+LDEI+MGGMVLETNI  +L +I +Q ++H
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQNVESEALQQSVIRRVFQQVAARPDSFCNYLEGIVPEWGDHIKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYILDEIVMGGMVLETNIQGVLQSIKDQGKIH 149
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: A0A1Z5JTJ4_FISSO (AP complex subunit sigma n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTJ4_FISSO)

HSP 1 Score: 254 bits (650), Expect = 1.440e-78
Identity = 118/152 (77.63%), Postives = 138/152 (90.79%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHAAS 456
            MI+G+IIVNNHGKPRLVKFYQ+V  E  Q+ VI+R+FQQVA RPDSFCNYLEG IPEWG+  KLIYRHYATL+FVFAVD+QESDLGILDL+QVFVE+LD+CFE+VCELDLIFHSD+VHYVLDEI+MGGMVLETNI+ +L A+ +Q+RLH  S
Sbjct:    1 MIKGIIIVNNHGKPRLVKFYQSVESESLQQSVIRRVFQQVAARPDSFCNYLEGAIPEWGDNIKLIYRHYATLFFVFAVDSQESDLGILDLIQVFVESLDRCFESVCELDLIFHSDRVHYVLDEIVMGGMVLETNIHSVLQAVKDQDRLHKDS 152
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BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Match: K0SBT8_THAOC (Clat_adaptor_s domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBT8_THAOC)

HSP 1 Score: 259 bits (661), Expect = 7.790e-78
Identity = 125/158 (79.11%), Postives = 139/158 (87.97%), Query Frame = 1 
Query:    1 MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHAASNKVALP 474
            MI+G+IIVNN GKPRLVKFYQ V GEE Q+ VI+R+FQQV+ RPDSFCNYLEG +PEWGE  KLIYRHYATLYFVFAVDAQESDLGILDL+QVFVEALDK FENVCELDLIFHSDKVH++LDEI+MGGMVLETNIN IL AI++Q R+H  S K   P
Sbjct:  174 MIKGIIIVNNSGKPRLVKFYQNVFGEEKQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGEKCKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDKVHHILDEIVMGGMVLETNINAILQAISDQERMHKDSMKTKGP 331
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.89.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQE5_ECTSI5.910e-11694.65AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZDS3_9STRA5.500e-8883.44AP complex subunit sigma n=1 Tax=Tribonema minus T... [more]
W7T2Y9_9STRA1.660e-8684.62AP complex subunit sigma n=2 Tax=Monodopsidaceae T... [more]
A0A6S8ZKR8_9STRA1.560e-8381.58AP complex subunit sigma n=1 Tax=Ditylum brightwel... [more]
A0A7S2P852_9STRA8.710e-8377.30AP complex subunit sigma n=1 Tax=Leptocylindrus da... [more]
A0A7R9U773_9STRA6.560e-8176.92Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
B5YNE9_THAPS2.790e-8079.87AP complex subunit sigma n=1 Tax=Thalassiosira pse... [more]
A0A8J9T0F8_PHATR5.220e-7979.19Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A1Z5JTJ4_FISSO1.440e-7877.63AP complex subunit sigma n=2 Tax=Fistulifera solar... [more]
K0SBT8_THAOC7.790e-7879.11Clat_adaptor_s domain-containing protein n=2 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig105contigA-nodosum_M_contig105:873978..883532 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQE5
Preferred nameAP3S1
PFAMsClat_adaptor_s
Model size1742
Max annot lvl2759|Eukaryota
KEGG koko:K10436,ko:K12399
KEGG Pathwayko04142,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0006605,GO:0006623,GO:0006725,GO:0006726,GO:0006727,GO:0006810,GO:0006886,GO:0006892,GO:0006896,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007033,GO:0007034,GO:0007040,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008055,GO:0008088,GO:0008089,GO:0008104,GO:0008150,GO:0008152,GO:0008286,GO:0008565,GO:0009058,GO:0009405,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010970,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0018130,GO:0019438,GO:0019748,GO:0023052,GO:0030117,GO:0030119,GO:0030123,GO:0030133,GO:0030659,GO:0030705,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0033060,GO:0033365,GO:0034613,GO:0042221,GO:0042440,GO:0042441,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043324,GO:0043434,GO:0043473,GO:0043474,GO:0044237,GO:0044249,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0045184,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0046907,GO:0047496,GO:0048066,GO:0048069,GO:0048072,GO:0048193,GO:0048475,GO:0048489,GO:0048490,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0065007,GO:0070727,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072384,GO:0072594,GO:0072665,GO:0072666,GO:0080171,GO:0097479,GO:0097480,GO:0097708,GO:0098791,GO:0098796,GO:0098930,GO:0099003,GO:0099111,GO:0099514,GO:0099517,GO:0099518,GO:1901360,GO:1901362,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701
Exons4
Evalue2.45e-122
EggNOG OGsCOG5030@1|root,KOG0936@2759|Eukaryota
Ec32 ortholog descriptionClathrin assembly complex, small subunit
Ec32 orthologEc-01_006410.1
Descriptionprotein transport
Cds size561
COG categoryU
BRITEko00000,ko00001,ko03036,ko04131,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866428.8506541-CDS-A-nodosum_M_contig105:873977..8740461680866428.8506541-CDS-A-nodosum_M_contig105:873977..874046Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 873978..874046 +
1680866428.863081-CDS-A-nodosum_M_contig105:881033..8812411680866428.863081-CDS-A-nodosum_M_contig105:881033..881241Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 881034..881241 +
1680866428.8756375-CDS-A-nodosum_M_contig105:881531..8816021680866428.8756375-CDS-A-nodosum_M_contig105:881531..881602Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 881532..881602 +
1680866428.8865385-CDS-A-nodosum_M_contig105:882138..8823511680866428.8865385-CDS-A-nodosum_M_contig105:882138..882351Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 882139..882351 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866428.8948066-UTR-A-nodosum_M_contig105:882351..8835321680866428.8948066-UTR-A-nodosum_M_contig105:882351..883532Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig105 882352..883532 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig105.89.1prot_A-nodosum_M_contig105.89.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig105 873978..882351 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig105.89.1

>prot_A-nodosum_M_contig105.89.1 ID=prot_A-nodosum_M_contig105.89.1|Name=mRNA_A-nodosum_M_contig105.89.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=187bp
MIRGVIIVNNHGKPRLVKFYQTVVGEEAQKRVIQRIFQQVAQRPDSFCNY
LEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDK
CFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINEQNRLHA
ASNKVALPPSGGIGVHGRPHGGGGGGPSGIPGMRTR*
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mRNA from alignment at A-nodosum_M_contig105:873978..883532+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig105.89.1 ID=mRNA_A-nodosum_M_contig105.89.1|Name=mRNA_A-nodosum_M_contig105.89.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9555bp|location=Sequence derived from alignment at A-nodosum_M_contig105:873978..883532+ (Ascophyllum nodosum dioecious)
ATGATCCGTGGTGTGATCATCGTAAACAACCACGGAAAACCCCGACTCGT
CAAGTTCTACCAAACAGTCGTGAGTCCCTCCGTACATTTGCTTTTTCCCG
ACAAAGGTTTAAAAGAAGCATGGATTACCTTTTGTTTATTGTTCATTTGG
AGATGCCTCTTTGTTCAAGTATTTTTGTAACATCACCGTTTTCTCTATGT
TTGGAGAGGACGTCGTACGTTTTTTCCTTCCGGATGGTGTTTTTTGTGAC
CACGGTCTGGAATTTTGAAATCAGCTGAATGAGAATCCAATCAATCGAAA
AATTATACTTAGTAGCAGTCTGTCTTTCGTGTTCAACACTTGTGCTACAG
TACAGTACATTTTTCTCCCTGACTGGGGGATGCCCAGACGGTCTAGGCGC
GTTGAGACTTTTCTTTAAATAATACTTACTGTACGCACTATATATAATAC
AGCTGGTAGATTGATAATAGAAGTGTAATGTACGGTACTTTCAATACGTT
AATACCAATATTAAGTAGTGGGTGTGAGAAATTAATTGATCCATGGTGAC
CTGCGAGGCACATTACTACCTTGAGGTTTACTCCATGGCGGACTCTCGTA
GATGGTAGATTGATAATAGAAGTGTAATGTACGGTACTTTCAATATGCCC
ACTTTATACCAATCGGCAGTGAACGCTATAGGTACGCAATTAAACTCGGC
CGGCGGACCCGCAGTGAACGCGTACGGCGGATTAAATTAATAATAACCCG
ATGGCGGACGCCGTTAATAATAAATAAATGGACGCCGTCGGGAGGAATCC
CGCAAGTAAGCACCAGATTCAACCTGAGTATGGAGATGAGCAGGCTGACG
CGGGACGGGACTTCCAAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGA
ACGCGAACAGGGAAATATTCATTTTCCCTGTTCAGCTGACCACGTGCAAG
ATTGGTAACCTTACCCGGTTGATCCATACTCTTGCTATATGTGTGACCAT
ATATACTTCGGTTACGGTTGTTGGCGTTTCCCCGGCCGATGCTTTCGCTG
GTGCTACAGCTATGGAAAACTGAAAAGCGTTATACCCACCTACTCTTCCG
ATTTACTACCGACCTGGTACAACAGTTTAAGCGTGATGAGTATTTTAAAG
AACGATTACATTTCAGAGAACCACTTGCATAGTGTGCACCTGGTACATCT
GTACGATATCTACACAGACTACATTCTTGTAAGGACGGTACCGATGTATT
TGTACGTCCATCTACTACTCTTCTGTTCTCCGTACGCCGCGTTCCTGTTT
TGGTGTTCCTACATGGCGATTAGACCCCTTGTTATGGCCATCACGTCCGG
CAGACGGGGCATCAACCGGTATGGTTGCCAATCCTCCTTGTGGTCAGCTG
AACAGGGAAAGTATTTTTCCTTGTCCCCGTTCGCGCCGGAGAATCTTTGG
TGTTGCGAGACGGGTTAGTCCGTCCCGTCCCGCGTCAGCTCGCTCATTCT
CCACACTCAGACTGAAACTGGTCCTTACCCACGGGTTCCACTCGCGAGCC
CCGTTTTCTGAAAATCACGGCGTCCATGTATATAAATTGGTCCATGGTGA
CCTGCCGAGGCAGCACTCGTTTGGAACTACCTTGAGGTTTACTGGCCCTG
CGCCGGCGGACTCTCGGCAGTGAAAGACATCGGTATGCAATTGCGTGACC
CGATAAACTCGGGACTGGCCCGATGGCGTATGGCGGTTTAAATCAATAAA
TGGACGCCGTCGCGGGAGTCGGGAGAAATCCCATGAGTAAGCACCATATC
CAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGAACTGCCGTAC
CCGTCTCGCGAGACCAAATTCTCAGGCGCGAAGGGGGACAGGGAAATCTT
CATTTTTCCTGTTCAGCTGACCACGAGCAGGATTGGTAACCTTACCCGAT
TGATCCATACTCTTGCTATATGTGATGACCATACATACATACATACATAC
AGGGACACCAAAACAGAGGCAAAAGCACATCACGAACAACCTAGATACGC
AATGACTCAGTTATGTTATATCGGGTTTGGGATCGGGTTAGAGTAGTGGT
GAATCGGAGGCGATTGTAAAATATACTAGCTATAATAATTATAATGATTG
CACAGGTATCTATAGTATTACTACTACTGTATATTACGATGTTATGTTAT
ACCCCACCAAACAAGTTACAGGTTGACGAGGAAGGAGACAGCATTATTAC
CGCTTGGCAAAGAGTGACACATTTTAATTTTAATTTTACCTTAGAACTCA
GAACTGCAGTAACAGACTCCTAAAAAGGATAAGTTGAGAAAGGTACTATT
ATATAAAGTTGACGTACAATAGGGGCAAATCGTGTCCCTGGTACCTGGTA
GAACTTAAAGAGCGTAGCTTGTCCTAGTATAGGCTAGGTTCATTATCGCT
ATTTCATTCAAGTCAAATCGACAAGTTATACAAGTAGAGGTAAAGGGCCT
CAAGATTATATTTAGTACATTAAGTCCATAGAAACTTCGTTACGGTGCTA
TAATATATACTTATAATATCTATTGTATTCAAAGAAAAATCTGAACGCAT
CTAAACCTTCCAATTAGTCAAAAGATTTAGGTGAGAACAGTGGCTGTAGG
GACATAAACTCTCCATGGTATTAAAAGGGTTCCCCAATGGAGTCACATAG
GGCCAACAGTATAATATCGGGGAGAAGCCCACCGTTACCCTGTACACTTA
CATTAATCACCATGTAGGGACACCAAAACAGAAGCAGACTATTTATTATA
CAGTATTTTTGGACTAAGAGTTCCAGACGACGGTACAGTAATAATTCTAT
AGAGAAATTAAGTTAAAAATAGGGTTTGGTGTTGGTATTTCGAAGGCAGT
CTAGGTCTACAGGCCATAGATGTGAAGGACCTCAAATTTACAGCATGCCA
ACTGATGTATTCATTTATGAAAGCAGGTCTGAGGTGTTTGAAGGTTTAGT
TACATACAGTAAGGTCAAAAGGATAAATCGTGGATACGTCACTCATTTTT
TTTTTTTTAATGTTAACTTGCAGCCGATGGACCTCATCATTACCATCCTG
CCTGTGGTCACTAAGGATCTTCCCATCTCTCCCCGTTCACGCCTTACGAT
TTTTTATCGCGATGCAAGTTCTGCACCCTTACAACTCGTCAACCAAAGAT
TGAATTTTTACTTACTCACGTTCCCACGCTTTCCGTTACGAAAGAAAGAA
CACAAATCCTACTTTGGTAAGAATCGAACTCACGACTTCCGCACTAGCAG
GTGTGCAGGTTATCTACTAGACCACTCGGGCGACGAGGGCTATACTATAA
AATTTACGTTAGTGATCAGGACTATAGTAATAGCTCTATGATAATAGTAC
TACGATAAAATATACCTACAGTTAACTATGAACTATATGGGAGGTCTCGA
ATTATAACGGGCCTATAAGAACTGATATAATAGAAGCAGGCGTAATTTAC
TTGTAGCATCAATAATGGATTTACAGGTTATGTACGTAAACGCAAGAGGA
ATGAGGTACAAGTATGTGTAACGATAAAACCAAAAGGTTTGAGTCAGAGA
TTTGAAGAAAGCGAAGAGGGCGACCGGCAGATCGAATGTCTTCAACATAC
AGTCGATGGTCCTCAATAGCGGCATATAGTGACAAGAGGCCATATTGCCG
CTATCCAGGGCAGTGCCGCTATTGAGGATGAAGGCGGCAAAGACGCGGTA
CTTTTAATCACAGACTACTCTCGTTTGCGCCATGCGTTCCCCATATTGTT
GCGTAGTGTATTATTGTTATCATTTTTAATATTTTATATTTTTTAATTGG
CTCAGTCAGAAACCATGACCATCATGGTACAGTACAGTACTGTACAATGT
ACTGCTGTACACTCTATAACACTACGCCACCACTAGCAGTATCATAGCAT
TACAGTACAGCAGTACAGCAACGCACAACAGAGCAACGAAGCGTACAGAG
CAAGCAGTAGCATTAAAGCAATGAACCACACCGCCGCAAAGCGTACAAAA
AAGGCAAGCAAACATCCACGCACGCAACATGGAGCAACATAAAAAAAAGA
GCAGGCACTTCTACTGCTGCTGTGCCTTACCGAAGCATCTATGATTCAAG
AAACATCCTCATGTCTGCCTGCCGTACTGGTTTTGCCGCGTGGGCGGCGA
GGAACGACATCTTTGCCTTGCGAAGAAAATGCCCTGCCTCGGTATTTCCA
GCCGGCTGTGCCAACTGTTCTAATGGGCCAAAAAATCCCGACAGTTCCGT
GTAGGGCGGCGGCGCTACCAACTTCCTACCCCCTGCACTCTCAATCTCTC
CCGTGTCGTTTAGCTCTTCTTCCTCGTCGGAATCAGGCTCCTCTGAGAAC
TTGTCGTTCATCTTCTCCACGAGCACCGCCTTTGTAGCTGCGGAGCCCCC
CGCCTGCCGCACACATGCACACAGCACACAACCTCCTCACACATCATGCC
ATGCGCGGCTGGAGAGCTTTGCAAACTTGCCGACGTAGAACTGATAGCCC
CCGACGGACGTGCCTGCAAGACTCAGAGATGTGCGAGGTACTGTCGCACC
TCGGTATCGTCCCGGGTATGCCCACCACCCCTCCAGCTATGGAGGCGGTC
GAGTCTTGGGTGGAACTAGAGGACCAGGATGACGTCGCTCACAAGAAGTT
ATCTAGACGATACTATTAATAATAGTAATAAAGACGGTAACGTCAGGGAA
CTAGAGACGCTGACGTCATCTTACATGTCACCGCAAGTTAGAGCGAGTAG
CTCTAATCCAACGGCCTCCCCCTTTGAGCTCGCGGGGCACACCCTCACAC
CCTTTTCGTCGCAACGCGGCTTTTGCTCTTGTCATTCATTCTCTCGTACG
TCCAAAATTTGCCAGCTTTTAAAGTTTTTACGGAAAGGTGTTCTATCGGA
AAACGATGCCTGCAAACTTAGTCGGGGTTTGTTGTTGCTTTCGAACGTTG
TTACTTTGTAGGTTACGCCCAAGCTCAGTATTAATATTATTGTGTGTATG
TTGTGTATGTGGTCATCACATATATATTATAAGTAAGAGTAAGGATGAAC
AGGATAATGTTGCCAATCCTGCTCGTGGTAAGCTGAACAAGGAAAAATGA
TATTTCCCTGTCCCCGTTCGCGCCTGAGAATTTGGTCTCGCGAGACGGTT
TCGGCAGTCCCGTCCCGCGTCAGCCTGTTCATCTCCATACTTCAGCTAAA
TATGATGCTTACTTACGGGATTCCTCCCGATTCCCGCGACGGCGTCTTTC
CTTAAACCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGAGTCACGC
AATTGCGTACCGATGGCGTTCACTGCCGAGAGCCCGCCGGCACAGGGCCA
GCAAACCTCAAGGTAGTTCCAAACGGGTGCTGCCTTGGCAGGTCACCACT
AACCAATTAATATGCGCCTCTCTTTCCCATGGTGCAATCCGCCCATCACC
ACATGTATATGAATCCCTGGACTGAGGGATGTGTTCAGCAACTTCTCTTT
AGCTTCGTTGCCTGCAGTGGCTGCTTCCCTTCGTCGTAGGGGGACCACCG
GACGCCGCCACTCAGTTGTCCCTTTTCCGTAACTTCGCACCTACTATTAA
TCATAGCGTTGTAACGTGCCAAGAGCGAAGCGTGGCAGTGATGTGATCGC
TGCTGTAGCGACGACTGCAACCACTGCAGCGTTGGTAGCGTAGATAGCTC
GCCCAAGATTCCTCGAGCTCGCCAGCTTACACGGACTGTCTTCCATCACG
AAGTTAGCGGGCGTGTGTTAGGTCTGCTCAGATGCAGTTCGCCGCTGCAG
CAGCATGAAACCCTACGAAACGCAACTAGTACCGGTACGTAGGGGTTGCA
CATGTTGTGACCCAGGGCGATTTTCGGGTGGCTTTGCTCGACACAAATAG
TTTACCCCTAACTCTCCCAAACGCGTTTGAGAATGTTTTGCAAAATTTCC
GTTTTCCTTTCTTCAAACGCAGTGGCGAGTTTTGCAGGTTTTTTCGGGCG
TTCAGAACGATGTGTACAGTAGCTTTCATCGAGAAAAATTAAGGCATACT
CGTAAAAGTACTTCGATTTCGTTCTAGGGTCTACATCATATTGTATTATT
TTACCTCAGTGTGCCCCTACGTCAGAGCACGCTTAACGACTTTAACATAG
TGTACTGCAGCTTTTATCGTGCCCCGTCCCGATTGTAGACGTACGGTAAC
TCTCGTAGGGACTCTCCCGTGTACGGTGCAGTACAGTACACAGCGTACTT
GAATTAGTCGTTCTGCTTATTTTATCGTGTTTCGTCACTCCTTGTGCTGT
TTGATGTAGCTCTACCGTATCCCCGTCTGCTGATTTCACCTGGGCCATTG
CCTTCAGAGCGTTAGCTCTAGTGTTCGTGATTCGGAAGATTTGGGCGCGG
ACGGTACGAGTTGCTAGGATGGCAACGTTTTAACTGTAGACCACCTGAAC
ATGTGCGTACATGAAATAATATTAGAGCGTCATGTATTATACATTTCTTT
GTTAGGTACGATACACTTGATACAACAGTTAATAGGATTCCCGGGACTTT
TCACCGCAATCGGCGCTGGAAAAGTTGGATGCTTGAGTATTAATGTACTT
TATGCTACATACTAAACACATACAGCACGCGTGCGGGGAAACAAAAGCAT
GTATTTGTACTCTACAGCGTATGATGCACGTGCTGGTGCTTTTACCTCCT
TGGGAGAAGAGGAGACTAGTGATATTAATATAACTATTTATACTGGATTA
GAGCTAGGTGGATGAGAAATCATGTGTGACCTTCCTCCTGTGTGACCCCG
GCTGGTACGTCCAACGAACTTGATGCCCAGAATGAATGGGAAGAAAACAC
ACACACACACGCACATACTGGGTTAGAGCTACAGTGCCTCTCATCTCGCG
CTTGCAAGCATTCAACGATCTATCACTCTAGTCGGGGGAGGAACTGATTG
CGAGGTCCTCGGGGCCAAACCGAATCATTCACGAAACACTGATCGCGCGT
GGACAGGTGGGCGAAGAGGCGCAGAAAAGAGTGATCCAGCGCATCTTTCA
ACAGGTTGCCCAACGACCCGACTCTTTCTGCAACTACTTGGAAGGAATCA
TCCCCGAGTGGGGGGAGGGCACGAAGCTTATCTACCGGCATTACGCCACC
TTGTATTTTGTGTTCGCCGTGGACGCCCAGGAAAGCGATCTCGGCATACT
CGATCTCGTTCAAGGTAAGCTCGCTTAGTTGAAAAACCGGAGAAATTTAG
TCAATGATGTTTGCTTTGGGTACATCAGGCAAGGTAATATTATCTCTTGT
GTTTGACGTACTGATGGCGACGTCCCGGTAGAGATTGATCTACGTATCTC
TACCGTATATCAACGTTGTTTCCAGAAGAAATAATCGGGCACAGAGAATG
GTAATGGCTGGTGCGTGGTCGTAGTATAGAGGCGCTGACTCCCGATCTCC
AATATCCCCCCCCCCACCCTGATGGCCCGATTCTCTTCCTGCTTATACCA
CCAGTTTTCGTGGAGGCGCTGGACAAGTGCTTCGAGAATGTTTGCGAGTT
AGATCTTATCTTCCACTCCGACAAGGTGAATAAAGTGTCGGGTGGCAGAG
CGTTCATCTTGCGCTCCGAAACTCTTAGCCTCGGATTCATTTCTTTCGTT
GACCCCCGAACCCTTCCAAGGGCTACCCCCGATCCGAGGTGTGTCGTAAT
ATTACGTGTAACCTCACTCTTACGTCATACAGTGCTATCATTCCATTTAT
TCTGGACGTCAGTGGACGCACCAGCCGGGGTCACACAGAATTTCTCCACC
TACCTTCTGCGGTGCTTGCCTTACTTTTTATCGCGAGAAGGATTCAGCCG
TCCCTTTCTCTCGTCGACTGTGTAGTCGAATTTTGTATACCCACGAAATA
ATCGTTCTCCACTTGTTGGGCATGATGCGAGGAAAATACCAGTTCGTGTG
ACTGCGCCGAGATTCGAACTCACGTCCCAACGTCAGAAAATTTCTCGAGG
TTACCAACTGAACCACCAGGGCGACCAATTACGGAAGGTCATAACGACTA
CCTGTTTCCCCCCCCCAACATTTTCCCTTTGAACCCGGTTGCGTCTATCC
CTGCACTGAAGGTCCATTACGTCCTCGACGAAATTATCATGGGCGGTATG
GTGCTAGAGACCAACATCAATCAGATTCTGACCGCAATCAACGAACAGAA
CCGCCTGCATGCCGCCTCGAATAAAGTTGCATTGCCACCGTCGGGTGGCA
TCGGTGTGCACGGGAGGCCACACGGCGGCGGCGGAGGCGGCCCGTCGGGC
ATTCCAGGCATGCGAACACGATGATGGCAGCTGTGGTGCGAAGCTCAACA
ACGAACTCCGAGGAGGCGTGTATCGTAACACTAATAATATTAATAAACGC
CGATAAGGGCCGTTAAGGGGTGTACTGGTACAGTACAGCACATTTGTCGT
TTCTCCGTTGTGTTGGGTCGTGTCGCCACAATAGACGACACCAGAGTTCG
TACAGTCGAACACTTTCAACAGCCGCGAAATAATATGGAGCGACAGAAAA
AGGTTTCTTTTCGTATCCAACTCGAGCTCTGCAAGCGCCGTTGGACATGA
CATGTTCTTATTAATTCAATAGTTGGCCAATGTGATGCGCGCGCCTTACG
TTGCCGATCTGGAGAAAAAATGCAGCGGATAATGCAGCAGGTAACAGCCG
CAAAAGAAAGTGTGATCGATTCATCCATAGTGATTCGCCCACCGACGTCG
TTCGTCACTCCAGATGGATTATATCAGATGAACGTGTTGCGGTACAAAGG
TTGACGCCAAGTTCCAACTCCTGAACGTTTTACAAAGTATAATTTGCGCG
AGAACCGTGGGAGTGAACGATCCGCGAAGGTGGCACCAACACGTACCAAC
ACTCATGGGTGTGCGGTGTGCGCAGGGCTCCCCGAGCGGAAGAGGAATGG
ATGCAAACGATTTGGAATTATTGGAAAGGAGGTGTACTAGAACAACTTGG
GCTTCAAATCCAAATGAAGTATACACCTCCATGTTACGTCCTTGCTTTCG
CGAATACGCAACATGTGCGCACAAGGTCGTGATGGTGCTGATGCAATATC
AGTCGAGTAAAGGGAGTATATTTAATGTCCTAACTCAACAAGTACTCGTA
GCGCCTGATCCGAATCCCCTTGAATATGAAGGCTATACTTGTAGCAAGTC
GTAGGGCCGATGAAAGGGGGACATGGAGACCAAAATCCGCACCGTAAGTC
TCCAGGCCAGTCTTGAACGACGCTTGTTATAGGACGAAATTATCGTACAG
TAAATAGGCCTGCGGTATAGTCGACACGATTAGCTGTTTCCCGGCTCGCC
ATTTTGTAAGTATTGCGTAAAGCTTGATTTGTAAAAAGTTACTTCGTACT
GTAGACCTAGTGTGCCGTAGTATAAATAGTATTTTTTTTTAAATACTAGA
GAGCGCAAGCTCCTTGCCACCCGAACCTCGGCTTTCCACGAAAAATGACG
CGAAA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig105:873978..883532+

>mRNA_A-nodosum_M_contig105.89.1 ID=mRNA_A-nodosum_M_contig105.89.1|Name=mRNA_A-nodosum_M_contig105.89.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=561bp|location=Sequence derived from alignment at A-nodosum_M_contig105:873978..883532+ (Ascophyllum nodosum dioecious)
ATGATCCGTGGTGTGATCATCGTAAACAACCACGGAAAACCCCGACTCGT
CAAGTTCTACCAAACAGTCGTGGGCGAAGAGGCGCAGAAAAGAGTGATCC
AGCGCATCTTTCAACAGGTTGCCCAACGACCCGACTCTTTCTGCAACTAC
TTGGAAGGAATCATCCCCGAGTGGGGGGAGGGCACGAAGCTTATCTACCG
GCATTACGCCACCTTGTATTTTGTGTTCGCCGTGGACGCCCAGGAAAGCG
ATCTCGGCATACTCGATCTCGTTCAAGTTTTCGTGGAGGCGCTGGACAAG
TGCTTCGAGAATGTTTGCGAGTTAGATCTTATCTTCCACTCCGACAAGGT
CCATTACGTCCTCGACGAAATTATCATGGGCGGTATGGTGCTAGAGACCA
ACATCAATCAGATTCTGACCGCAATCAACGAACAGAACCGCCTGCATGCC
GCCTCGAATAAAGTTGCATTGCCACCGTCGGGTGGCATCGGTGTGCACGG
GAGGCCACACGGCGGCGGCGGAGGCGGCCCGTCGGGCATTCCAGGCATGC
GAACACGATGA
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