mRNA_A-nodosum_M_contig105.84.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig105.84.1
Unique NamemRNA_A-nodosum_M_contig105.84.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A6H5KUZ7_9PHAE (Iwr1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ7_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 3.160e-96
Identity = 239/564 (42.38%), Postives = 311/564 (55.14%), Query Frame = 2
Query:   86 MSYAPFHPKSREALAAATAATAGVTVEEPRPRPHQVILRIKRKRGDLAVESIVVAAPEE--------VGPDRKRRLAAG-SIQDHFAELTLSKNCCEERDQQQEP-------------VQMAPHLFFKRAS----DNNIRLVEQGSSDPA-TPPAQVEMAETFRTGGGG------GKPGTLSRCGTEETGA-------PVAAVVDYLEVRRIRAKA-----KAAHAMVSDVGDQSERLCSSTREKSLVS--------ANFQVIDLQRIGKSE-TAEMDVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSL----AFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLVDTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVH---------------DFVYDLYYFSPAESRATP---------------LGRRSGSGDTASVEKAGDETQASTQF----PVVLLSGIGPIDENA--TVTTGLELTFENNSDWS---EPGDDAGEDPDSNSEGFFANDYPEEEGE 1486
            MS AP   KSR+A+AAA    A  + ++P P PH V+LR+KRKRGD AVES++VA  +E        + P+RKRR A   SI +  A L+L K    +R QQ  P             +Q    L +KR      D +    E+G S  A  PPA+ + A      GG       G+   L R     T +       P AAV DYLEVRR++A+A     K + A V   G    +   S +   L          AN  VIDL  +G+++ +A MD   +      G   ++T  +A AP+L P+ERQ+DEAIF+AF+TGD+S+LRDIL+TS     A VNYRRR+GD++TALMAAAFHGD+  VRY LS+GAKA+LVD  G++AAL AGMRGHR+CFAELQRVAD+E                          DFVYDLY++ P    +T                 G  SG+  T+S E  G++T          PVV LSGIGP+DENA  T+  G+EL FE++SDWS   E GDD GEDPDSNSEG++ NDYPE+EG+
Sbjct:    1 MSQAPVRRKSRKAVAAAMEKNAA-SQKKPAPAPHLVVLRVKRKRGDAAVESLLVATTDEGERIEEQEMMPNRKRRAAGTISIAETMAVLSLDKTAESQRQQQHSPXXXXXXXXXPAVKMQSPRRLVYKRVRTTEPDGSRDRGEEGRSPVAGAPPARQKRALDGGEEGGXXXXXXXGRLDALLRSKGLNTNSASCSPPPPTAAVFDYLEVRRVKARAVGIVPKNSPAPVDSSGRGGHKQHPSPQSSGLAPEGAATAAPANLHVIDLHAVGQADASAMMDTLVMGDAGAAGGAHVATAKRAAAPILTPVERQMDEAIFTAFQTGDMSSLRDILTTSSYPSPAGVNYRRRLGDASTALMAAAFHGDLGTVRYLLSIGAKATLVDAHGRSAALFAGMRGHRECFAELQRVADQEEXXXXXXXXXXXXXXXXXXXXXXXXXDFVYDLYFYEPPAQASTVGPPAVGAPAPGAGEGAGTPSGAVPTSSGE-LGEKTTIDAADGGAPPVVRLSGIGPVDENAVGTMAAGVELEFEHDSDWSGLGEEGDD-GEDPDSNSEGYYGNDYPEDEGD 561          
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: D7FQE4_ECTSI (Heat shock protein, mitochondrial protein import, putative mitochondrial translocase complex subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE4_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 9.330e-74
Identity = 168/366 (45.90%), Postives = 214/366 (58.47%), Query Frame = 2
Query:  560 PVAAVVDYLEVRRIRAKA-----KAAHAMVSDVGDQSERLCSSTREKSLVS--------ANFQVIDLQRIGKSETAEM-DVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSL----AFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLVDTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVH---------------DFVYDLYYFSPAESRAT--------------PLGRRSGSGDTASVEKAGDETQASTQF-----PVVLLSGIGPIDENA--TVTTGLELTFENNSDWS---EPGDDAGEDPDSNSEGFFANDYPEEEGE 1486
            P AAV DYLEVRR++A+A     K + A     G        S +   L S        AN  VIDL  +G+++ + M D S +      G   +ST  +A AP+L P ERQ+D+AIF+AF+TGD+S+LRDIL+TS     A VNYRRR+GD++TALMAAAFHGD+  VR+ LS+GAKA+LVD  G++AAL AGMRGHR+CFAELQRVAD+E                          DFVYDLYY+ PA   +T                     +    S  K G++            PVV LSGIGP+DENA  T+  G+EL FE++SDWS   E GDD GEDPDSNSEG++ NDYPE+EG+
Sbjct:   81 PTAAVFDYLEVRRVKARAVGIVRKNSPAPADSSGRGGHEQDPSPQSSGLASDGAATAAPANLHVIDLHAVGQADASTMMDTSVMGDAGAAGGAHVSTAKRAAAPILTPAERQMDKAIFTAFQTGDMSSLRDILTTSSYPSPAGVNYRRRLGDASTALMAAAFHGDLGTVRHLLSIGAKATLVDAHGRSAALFAGMRGHRECFAELQRVADQEEXXXXXXXXXXXXXXXXXXXXXXXXXDFVYDLYYYEPAAQASTVGPPAVGAPAXXXXXXXXXPSAAVPTSCGKLGEKQTTINAAGGGAPPVVRLSGIGPVDENAVGTMAAGVELEFEHDSDWSGLGEEGDD-GEDPDSNSEGYYGNDYPEDEGD 445          
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A6A3K4Y1_9STRA (Probable RNA polymerase II nuclear localization protein SLC7A6OS n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3K4Y1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.460e-12
Identity = 132/473 (27.91%), Postives = 196/473 (41.44%), Query Frame = 2
Query:  128 AAATAATAGVTVEEPRPRPHQVILRIKRKRGDLAVESIVVAAPEEVGPDRKRRLAAGSIQD---HFAELTLSKN--CCEERDQQQEPVQMAPHLFFKRASDNNIRLVEQGSSDPATPPAQVEMAETFRTGGGGGKPGTLSRCGTEETGAPVAAVVDYLEVRR--IRAKAKAAHAMVSDVGDQSERLCSSTREKSLVSAN-FQVIDLQ-----RIGKSETAEMDVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSLAFVNYR----RRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLSGI-------GPIDENATVTTGLELTFENNSDWSEPGDDAGEDPDSNSEGFFANDYP 1471
            AAA A+ A     +   +P  V LR+KRKR D  +E +VV +     PD KR  + G+ QD    F +L+ ++     +  D  +EP  +AP     + +D   R       + A   A+ ++A  F                      P+A+      V++   R+KA+    M+   G Q        REK  +  N  +++DLQ        K E  E D   +   ++     ++        VLNP ER++DEAI+ AFR  D +    I       +       +R  D +T +MAAA HG  D +   L  G  + L  D  G TAA+ A   GH +   E   +A EE+ Q K      D+VYD+Y    + S      R+  + DTAS  + G    +    PVV +S          P DE        E   E++ D ++  D   ED  SN E   ANDYP
Sbjct:   20 AAARASRASKPKPQGNEKPSFVFLRLKRKRTDDPMECLVVHSE----PDTKR--SKGASQDLLQAFTKLSTTEKRFVFKHIDTMEEP--LAPGRV--KWTDRLKRKARSLKDERADMLAKKQIAPVFHKD-------------------PIASKQTERRVKQQQSRSKARRNEEMLKSRGLQP---LVEIREKQTMELNGIRLVDLQVSTVPNKEKEEKEEGDE--LLEKSKADLVTVNGARLKPTRVLNPHERELDEAIWKAFRVNDFAPFFQIYHARRPELRVDPVSFQRPADGSTIVMAAALHGRSDVIEVLLRAGTTSILQQDWEGATAAVFAKRGGHAN--VETALLACEEAEQEK------DYVYDVYCVDISASE-----RQDSAHDTASSSEEGSGQTSVNGVPVVSVSSEVHRWLSEEPSDEVE------EYMLESDIDSNDEVDGLSED--SNDEDHVANDYP 437          
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: G5AF95_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AF95_PHYSP)

HSP 1 Score: 80.1 bits (196), Expect = 3.620e-12
Identity = 116/427 (27.17%), Postives = 184/427 (43.09%), Query Frame = 2
Query:  107 PKSREALAAATAATAGVTVEEPRP-------RPHQVILRIKRKRGDLAVESIVVAAPEEVGPDRKRRLA-AGSIQDHFAELTLSKN--CCEERDQQQEPVQMAPHLFFKRASDNNIRLVEQGSSDPATPPAQVEMAETFRTGGGGGKPGTLSRCGTEETGAPVAAVVDYLEVRRIRAKAKAAHAMVSDVGDQSERLCSSTREKSLVSANFQVIDLQ----RIGKSETAEMDVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSLAFVNYR----RRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYY--FSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLS 1324
            P +     AA +ATA       +P       +P  V LR+KRKR D  +E +VV   E   PD KR    A  +   F +L+ ++     +  D  +EP+      + +R      R ++   +D     A+ ++A  F+      K  T S+  TE            ++ ++ R+KA+    M+   G Q   +     ++++     +++DLQ       K E  E  V+ V   ++     ++        VLNP ER++DEAI++AFR  D +    I       +       +R  D +T LMAAA HG  D +   L  G  + L  D  G TAA+ A   GH +   E   +A EE+ Q K      D+VYD+Y    S +ES+ T       + DTA+  + G E  +    PVV +S
Sbjct:   10 PSTSTGARAAPSATAARVTRASKPSTEGANEKPSYVFLRLKRKRTDDPMECLVVQQSE---PDAKRSKGKAEDLLQAFTKLSTTEKRFVFKHIDTMEEPIAPGRVKWTERLK-RKARSLKDERADML---AKKQIAPVFQ------KDPTASKQ-TERR----------VKQQQSRSKARRNEEMLKSRGLQP--VVEIKEKQTMELHGIRLVDLQVSTVASSKEEKKEEGVT-VLEKSKTDLVTVNGARLKPTRVLNPHERELDEAIWNAFRANDFAPFFQIYHARRPELRVDPVSFQRPADGSTILMAAALHGRSDVIEVLLRSGTTSVLQQDWEGATAAVFAKRGGHDN--VETALLACEEAEQEK------DYVYDVYCVDISASESQGT-------AHDTATSSEDGAEQTSVNGVPVVSVS 394          
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A0P1ASE5_PLAHL (Transcription factor Iwr1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASE5_PLAHL)

HSP 1 Score: 79.7 bits (195), Expect = 5.600e-12
Identity = 131/468 (27.99%), Postives = 199/468 (42.52%), Query Frame = 2
Query:  134 ATAATAGVTVE-EPRPRPHQVILRIKRKRGDLAVESIVVAAPEEVGPDRKRRLAAGSIQDHFAELTLSKN--CCEERDQQQEPVQMAPHLFFKRASDNNIRLVEQGSSDPATPPAQVEMAETFRTGGGGGKPGTLSRCGTEETGAPVAAVVDYLEVRRIRAKAKAAHAMVSDVGDQSERLCSSTREKSLVSANFQVIDLQRIGKSETAEMDVSGVYRGARLGAGEISTRSQAGAP--VLNPLERQVDEAIFSAFRTGDLSTLRDIL----STSLAFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFS-PAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVV--------LLSGIGPIDENATVTTGLELTFENNSDWSEPGDDAGEDPDSNSEGFFANDYPEEE 1480
            AT A+  +TV+ + + +P  V L +KRKR D  +  +VV +     PD KR      + + FA+L+  K     +  D  +E V  + H  + +      R +++   + A   A+      F+   G  K        TE+           ++ ++ R+KA+    +    G  +      T++  L     +++DLQ +       ++V     G +  A  ++       P  VLNP ER++DEAI++AFRT D +    I     S   A     +R  D +T LMAAA HG  D +   L  G  + L  D  G TAA+ A   GH +    L+  A EE+ + K      D+VYD+Y     A  +  PL  +  S D A + K      A    P+V         LS   P DE        E   E++ D SE   D G   DSN E   ANDYP+EE
Sbjct:   14 ATKASHSLTVKLDEQKKPSFVFLSLKRKRTDEPMNCLVVQSE----PDSKRYKT--DLLEAFAQLSTGKKRFVFKHIDTMEESV-ASGHAKWTQRLKRKARTLKE---EHANMMAKKHQISVFQKEFGASKQ-------TEKR----------VKQQQCRSKARRNENVFQSRGLNAFVEIKETQKIEL--GGIRLVDLQ-MSSDSNPNIEVGVEKNGTKSNADLVTINGVTLKPTRVLNPYERELDEAIWAAFRTNDFAPFFRIYHAQQSEQRAIPTTFQRPVDGSTILMAAALHGRNDVIEVLLRSGNLSILQQDWEGATAAMFAERGGHLNVATALR--ACEEAEREK------DYVYDVYCVDLEATEKQDPL--QDSSTDLADISKQIGVNSA----PIVNVSSEVHHWLSRDTPSDEVE------EYVLESDLDSSE---DDGLSEDSNGEDNAANDYPDEE 428          
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: M4BAP8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAP8_HYAAE)

HSP 1 Score: 76.3 bits (186), Expect = 5.260e-11
Identity = 107/396 (27.02%), Postives = 161/396 (40.66%), Query Frame = 2
Query:  179 RPHQVILRIKRKRGDLAVESIVVAAPEEVGPDRKR-RLAAGSIQDHFAELTLSKN--CCEERDQQQEPVQMAPHLFFKRASDNNIRLVEQGSSDPATPPAQVEMAETFRTGGGGGKPGTLSRCGTEETGAPVAAVVDYLEVRRIRAKAKAAHAMVSDVGDQSERLCSSTREKSLVSANFQVIDLQRIGKSETAEMDVSG------VYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSL----AFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLS 1324
            RP  V LR+KRKR D  ++ +VV +     PD KR +  +  +   F +L+ +      +  D   +PV      + +R      R       + A   A+  +A  F+    G KP TL R   +++ +      + L  R ++   K       +V     RL            + QV     + +SE  +  V           GARL     S R      VLNP ER++DEAI+ AFR+ D +    I         A     +R  D +TALMAAA HG  D +   L   A + L  D  G TAA+ A   GH  C  E   +A E+  + K      D+VYD+Y    + S    +      G T   E + ++T  +   P+V +S
Sbjct:   18 RPAFVFLRLKRKRTDERMDHLVVYSE----PDSKRIKNGSSDLLQAFTKLSTTDKRFVFKHIDTMDDPVASERAKWMERLK----RKARSLQDERAVLMAKKPVASVFQPDVAGLKP-TLQRVKQQQSRSKALRSEEMLRARGLQPVVKITEKQTREV--HGIRL-----------VDLQVSPSSGVEESEKKQNQVDEDNAEIVTVNGARL----KSMR------VLNPYERELDEAIWMAFRSNDFAPFFQIYHAQRPELGASPTSFQRPADGSTALMAAALHGRSDVIEVLLRSDAASVLQEDWTGATAAMFANHGGH--CNVETALLACEKVEREK------DYVYDVYCVDTSASGGQDIA----CGATTRSENSSEQTSVN-DVPIVSVS 368          
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A484EGW7_BRELC (Probable RNA polymerase II nuclear localization protein SLC7A6OS n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGW7_BRELC)

HSP 1 Score: 72.8 bits (177), Expect = 8.670e-10
Identity = 81/275 (29.45%), Postives = 119/275 (43.27%), Query Frame = 2
Query:  683 KSLVSANFQVIDLQRIGKSETAEMDVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTL--------RDILSTSLAFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLSGIGPIDENATVTTGLELTFENNSDWSEPGDDAGEDPDSNSEGFFANDYPEEE 1480
            KS ++ N ++ D  R+ KS  + + V+G+   ++               VLNP ER++DEAI++AFR  D +          +D L   +AF    +R  D +  LMAAA HG  D +   L  G  + L  D  G TAA+ A   GH D   E   +A E++   K      D+VYD+Y    + S         G     ++   G E   S   P++ +S       +  +       F   SD     +D G   DSN E   ANDYP+EE
Sbjct:  185 KSTLALNEKMED--RLTKSSRSAVTVNGIRMKSKR--------------VLNPYERELDEAIWTAFRANDFAPFFRIYYTRRQDGLVDPVAF----QRTADGSNILMAAALHGRSDVIEVLLRSGTTSVLQQDFVGVTAAIFARRGGHAD--VEKALLACEQAEHEK------DYVYDVYCVDMSAS---------GDAQGPTMILNGKEKTVS-NVPIISVSSEVHHWLSEDILRNEVENFMLESDLDSSDEDDGLSEDSNDEDNVANDYPDEE 421          
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: F0W0W7_9STRA (Angioassociated migratory cell protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0W7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.220e-9
Identity = 71/224 (31.70%), Postives = 100/224 (44.64%), Query Frame = 2
Query:  830 VLNPLERQVDEAIFSAFRTGDLSTLRDILSTSLA------FVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSL-GAKASLVDTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLSGIGPIDENATVTTGLELTFENNSDWSEPGDDAGEDPDSNSEGFFANDYPEEE 1480
            VLNP++R+VDEAI+ AF+  D S    IL    A       +N+ R + D +T LMAAAFHG +D +   L + G K  L D  G  A+  A    H      L  +A E + + K       FVYDLY      + +T          T S+   G +         V    +  ++       G    F  +SD S   D+ GE  +SN E ++ NDYP+EE
Sbjct:  654 VLNPMQREVDEAIWKAFQQNDFSAFFQILHCEKAEQSMPKVLNFARPL-DGSTVLMAAAFHGRVDVIESLLQVTGIKVLLRDLEGSAASDFAARNKHLSVQEAL--IACETTEREKA------FVYDLYCVESVPTTST----------TESLANDGLDIPVVHVNETVQQWLVDGLNNFQKAEDGEIEDFVFDSDNSIDQDEDGESLNSNDEDYYLNDYPDEE 858          
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A835YSD4_9STRA (Alkaline-phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD4_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.370e-9
Identity = 45/91 (49.45%), Postives = 54/91 (59.34%), Query Frame = 2
Query:  830 VLNPLERQVDEAIFSAFRTGD-LSTLRDILSTSLAFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLVDTCGKTAALLAGMRGH 1099
            VL P+ER  DEAI+ AFR G   + L ++L    A VN+ R   D TT LMAAA+ GD   V   L+LGA   +VD  G TAA LA M GH
Sbjct:  881 VLTPMERLTDEAIWHAFRDGGGAARLLEVLQQGGAGVNFTRTHADGTTPLMAAAYCGDGAVVTRLLALGAGPCVVDYSGNTAAKLASMNGH 971          
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A1V9ZB65_9STRA (Probable RNA polymerase II nuclear localization protein SLC7A6OS n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB65_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.270e-9
Identity = 70/247 (28.34%), Postives = 110/247 (44.53%), Query Frame = 2
Query:  776 GARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTL-----RDILSTSLAFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAK-ASLVDTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGD-----ETQASTQFPVVLLSGIGPIDENATVTTGLELTFE-NNSDWSEPGDDAGEDPDSNSEGFFANDYPEEE 1480
            G  +       R++A   V+NP+ERQVDEAI++AF+  D S       + + +T+L  + ++R   D  + LMAAA H   D +   L++ +K   L D  GK+A  +A  +GH      L+     E  +         +VYD+Y    + +++ P            V  + +     ETQ     P                    EL F+ ++SD  +  +D   D DSN EG+ ANDYP+EE
Sbjct:  152 GPAIAVNGAELRAKALKRVMNPMERQVDEAIWTAFQKNDFSAFFRLQQQQVKATTLNPLLFQRP-ADGGSILMAAAMHNRTDVIEALLAIDSKHVVLRDYNGKSAGDIAADQGHAAAATALRACETVEDDK--------QYVYDVYSVDVSATKSLPAPAELDDVPVVEVSTSVEKWLMYETQGDMDSP------------------DRELLFDVSDSDKDDMHED---DEDSNDEGYVANDYPDEE 368          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUZ7_9PHAE3.160e-9642.38Iwr1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FQE4_ECTSI9.330e-7445.90Heat shock protein, mitochondrial protein import, ... [more]
A0A6A3K4Y1_9STRA2.460e-1227.91Probable RNA polymerase II nuclear localization pr... [more]
G5AF95_PHYSP3.620e-1227.17Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A0P1ASE5_PLAHL5.600e-1227.99Transcription factor Iwr1 n=1 Tax=Plasmopara halst... [more]
M4BAP8_HYAAE5.260e-1127.02Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A484EGW7_BRELC8.670e-1029.45Probable RNA polymerase II nuclear localization pr... [more]
F0W0W7_9STRA1.220e-931.70Angioassociated migratory cell protein putative n=... [more]
A0A835YSD4_9STRA1.370e-949.45Alkaline-phosphatase-like protein n=1 Tax=Tribonem... [more]
A0A1V9ZB65_9STRA2.270e-928.34Probable RNA polymerase II nuclear localization pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig105contigA-nodosum_M_contig105:850726..853958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQE4
Model size2073
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.39e-76
EggNOG OGs28PNG@1|root,2QWAI@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, DNL-type
Ec32 orthologEc-01_006420.1
Descriptionankyrin repeats
Cds size1503
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig105.84.1prot_A-nodosum_M_contig105.84.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig105 851211..853873 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866428.7631276-UTR-A-nodosum_M_contig105:850725..8512101680866428.7631276-UTR-A-nodosum_M_contig105:850725..851210Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig105 850726..851210 -
1680866428.8130426-UTR-A-nodosum_M_contig105:853873..8539581680866428.8130426-UTR-A-nodosum_M_contig105:853873..853958Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig105 853874..853958 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866428.773743-CDS-A-nodosum_M_contig105:851210..8513241680866428.773743-CDS-A-nodosum_M_contig105:851210..851324Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 851211..851324 -
1680866428.7869704-CDS-A-nodosum_M_contig105:851738..8519271680866428.7869704-CDS-A-nodosum_M_contig105:851738..851927Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 851739..851927 -
1680866428.7951472-CDS-A-nodosum_M_contig105:852301..8527121680866428.7951472-CDS-A-nodosum_M_contig105:852301..852712Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 852302..852712 -
1680866428.8037343-CDS-A-nodosum_M_contig105:853084..8538731680866428.8037343-CDS-A-nodosum_M_contig105:853084..853873Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 853085..853873 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig105.84.1

>prot_A-nodosum_M_contig105.84.1 ID=prot_A-nodosum_M_contig105.84.1|Name=mRNA_A-nodosum_M_contig105.84.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=501bp
MSYAPFHPKSREALAAATAATAGVTVEEPRPRPHQVILRIKRKRGDLAVE
SIVVAAPEEVGPDRKRRLAAGSIQDHFAELTLSKNCCEERDQQQEPVQMA
PHLFFKRASDNNIRLVEQGSSDPATPPAQVEMAETFRTGGGGGKPGTLSR
CGTEETGAPVAAVVDYLEVRRIRAKAKAAHAMVSDVGDQSERLCSSTREK
SLVSANFQVIDLQRIGKSETAEMDVSGVYRGARLGAGEISTRSQAGAPVL
NPLERQVDEAIFSAFRTGDLSTLRDILSTSLAFVNYRRRIGDSTTALMAA
AFHGDMDAVRYFLSLGAKASLVDTCGKTAALLAGMRGHRDCFAELQRVAD
EESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGDE
TQASTQFPVVLLSGIGPIDENATVTTGLELTFENNSDWSEPGDDAGEDPD
SNSEGFFANDYPEEEGEEDESGPPYFDHGSSSSSENGSSGDDAFSSDEAT
*
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mRNA from alignment at A-nodosum_M_contig105:850726..853958-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig105.84.1 ID=mRNA_A-nodosum_M_contig105.84.1|Name=mRNA_A-nodosum_M_contig105.84.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3233bp|location=Sequence derived from alignment at A-nodosum_M_contig105:850726..853958- (Ascophyllum nodosum dioecious)
GCTCTCACCATCCTCAGCTCCTGGCAGCAGCATTCAGTCTCCATACAAGA TCCCTTCATTCGCTAGGAATAAAGACAAGGGATTCATGTCGTATGCCCCG TTCCATCCCAAGTCGCGGGAGGCACTCGCTGCGGCGACTGCAGCAACAGC TGGTGTTACTGTTGAAGAGCCTCGACCACGACCGCACCAGGTGATACTGA GGATCAAACGCAAGAGGGGAGATTTGGCCGTTGAGAGCATCGTCGTTGCC GCCCCAGAGGAAGTTGGGCCGGACCGCAAGCGCCGTCTCGCGGCCGGTTC CATTCAAGATCATTTCGCCGAGCTTACACTGAGCAAGAACTGCTGTGAGG AACGGGACCAACAGCAGGAGCCGGTTCAGATGGCTCCGCACTTGTTTTTC AAGCGGGCCAGCGACAATAACATACGCCTTGTAGAGCAAGGATCATCGGA TCCCGCCACTCCGCCAGCGCAAGTAGAGATGGCCGAAACATTTAGGACGG GTGGTGGCGGAGGGAAGCCTGGTACGCTTTCAAGATGCGGAACGGAAGAA ACCGGGGCCCCGGTGGCAGCTGTCGTCGATTACCTCGAGGTCCGACGCAT CCGTGCCAAGGCGAAGGCTGCCCACGCTATGGTCAGCGACGTTGGCGACC AGAGCGAGCGTCTGTGCTCGTCAACCCGGGAGAAATCTTTGGTGTCCGCT AACTTTCAAGTTATTGATCTTCAGCGAATAGGCAAGAGTGAAACCGCGGA GATGGATGTATCAGGAGTGTACAGAGGAGCTAGGCTAGGGGCTGGCGAGA TCTCAACGAGAAGTCAGGCAGGGGCCCCTGTGTTGAATCCTCTGGAGCGC CAGGTGGATGAAGCCATTTTCTCGGTAAGCAAGTGGTTTTGCCTATGGTG AAGAAATAATAGTTGCAGCAGAGCTTGTCACTCGCACAGCATCATTTTTT TCGTAACTTGACTTCTAGCTCTTTAGCTGCATGACCCAAGCCAAGGTAAT TTACGTCGCGCGTTGATGTCCCTTTAACCCTGGGTAAGCATCTGCTGTGA ACCATCGTTTCTCGATATTACCCATCTGAGAGATCCTGAAAGTTCCCACC CCATCATCTGAAACCTGATTGATATGATCCATGAGATAGGATCCATATCT TCCTCACACGGAAAGCGTTTACGTGCAGAAATCCAATTTCCAGTCGCACT TCAACGTTTCCCCCGTGCTCGACTCGTGGGCGACACAATGCGACAGGCCT TTCGGACGGGAGACTTGTCGACCCTGCGCGATATCTTGTCGACGTCCCTC GCCTTCGTCAACTATCGCCGTAGGATCGGCGACAGCACGACGGCGCTGAT GGCCGCCGCTTTCCATGGCGACATGGACGCTGTACGATATTTTTTGTCTC TCGGCGCTAAGGCATCCTTGGTCGACACCTGCGGTAAGACAGCTGCGCTT TTGGCGGGAATGCGAGGTCATCGGGACTGCTTCGCAGAGCTCCAACGCGT TGCGGACGAAGAGAGCGCTCAAGGGAAGGGACCTGGAGGTGTTCACGATT TCGTTTATGATCTCTACTACTTCAGTCCCGCCGAGTCGCGAGCAACGCCG CTGGGTAGAAGAAGCGGGTCAGGCGACACGGCAAGTGTTGAGAAGGCTGG AGATGAGGTACACTTATTTGCTGTCTGTCGGTCTTCTCATCGGCTTAACA AGAACCGTTTCTCAGTTAATGTTTCTGTTTCTCTTTCATTCAGCGTATTG GTTGCCAACACGAAAAAACTACTACATATGGCAACAACATCATTGTATCA CTTCTCAATATTTCTTAGGCCAGGTCATGGAAATCTCGCGCAGATCGGCA AACATTCGGGGTTCCGTACGTCTATGTTATATATTGAGTACATAACATAT TGTCGACTGCGCTGTATATATTTATTGGTACGAAGTGCTTCAGTAAGTGG TCAATCGTTCACGCTCTGATCATGTAGCCTTTGCCCGGGACGACCACGAC CGCACGTCATGCAACTCCTCGCTTACCGCAGACACAAGCCTCCACACAAT TTCCCGTCGTGCTACTCTCTGGCATCGGTCCTATTGACGAAAACGCCACG GTGACGACGGGATTGGAGCTAACATTTGAGAACAATTCTGACTGGAGCGA GCCTGGCGACGATGCCGGGGAAGACCCCGACTCCAATTCGGAGGGGTTCT TCGCTAATGACTATCCCGAGGTGTGCAAAGCAAGGTTTCGCTGGACGAGT GTCATGTCTAGCTCTCGAACCAGCGAACCTCGTCAACGACCGGACGAACA CACATACAGCACGTTAGATAAAAAACAGGGCGGTTGCCGATCCTCCTTGT AATTCAGCTAAATAAAGAGAAAAGTAGTTTTCCCTGACCCCGTTCGCCGC CTGTGAACTAGGTCTCGCGACACAGGTTCGACAGTCCCACTCCCGCGGCA GCCCGCTCATGCATGGATCTGATATTTTATGAGCATGCATACTGTAGTCT CGTTTCCGTTTAGTATTTGACTTAGATGCAGGGTCGATATAGGTCTATCC AGTTGTTAGACTATATAAAACAAATCCTTGATGCTTCGTTTGGTGGGTCC ACTTGGATCGCATTATGTCCCTTCACTTTCACAGGAAGAGGGTGAAGAGG ACGAAAGTGGACCACCTTACTTTGATCATGGGTCGTCTTCCTCCTCGGAG AATGGAAGCAGCGGTGACGACGCGTTTTCCAGCGACGAGGCGACTTAGGG TCGCAAAGTTGTCCATGGCGTTGAATTTGACCATGCCCGCACATTCAGGT CACCGTTCTCTAGCTCACCTGAGAATGGCGGAGGTCAACTACAGCAGGTA TCAACCTCAGAAGCTGATACTATGGACGGCCCGGTTCCTGCGGACGTGAG CGGGGGACGGTAATTTTTTTCGTCTGGGATAGATCGTCGAGATGATACTG GAGGCGACTGCAGCGAGTGACCCGACATGCTCCTGATAGCACACAGATCT CGAGTTATCTTGGGATTTTATCACCTTTGGTAAGATTTCAAGTGCCGGTA CTATCATTTATGTTGGCGAAGACGCAAACCACCTCGTGTGGCATTATTGA AACGCATCAACAGATGTCGGAATCCAAAACATGATGATAACATCCTTCCT TCGGCACTGCGGCACACGTCACAAAACTCGGGAATGGCCAGCTATCGCGA AGAACGGCACGTAGGTATTATGCTGCTTTAAAT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig105:850726..853958-

>mRNA_A-nodosum_M_contig105.84.1 ID=mRNA_A-nodosum_M_contig105.84.1|Name=mRNA_A-nodosum_M_contig105.84.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1503bp|location=Sequence derived from alignment at A-nodosum_M_contig105:850726..853958- (Ascophyllum nodosum dioecious)
ATGTCGTATGCCCCGTTCCATCCCAAGTCGCGGGAGGCACTCGCTGCGGC
GACTGCAGCAACAGCTGGTGTTACTGTTGAAGAGCCTCGACCACGACCGC
ACCAGGTGATACTGAGGATCAAACGCAAGAGGGGAGATTTGGCCGTTGAG
AGCATCGTCGTTGCCGCCCCAGAGGAAGTTGGGCCGGACCGCAAGCGCCG
TCTCGCGGCCGGTTCCATTCAAGATCATTTCGCCGAGCTTACACTGAGCA
AGAACTGCTGTGAGGAACGGGACCAACAGCAGGAGCCGGTTCAGATGGCT
CCGCACTTGTTTTTCAAGCGGGCCAGCGACAATAACATACGCCTTGTAGA
GCAAGGATCATCGGATCCCGCCACTCCGCCAGCGCAAGTAGAGATGGCCG
AAACATTTAGGACGGGTGGTGGCGGAGGGAAGCCTGGTACGCTTTCAAGA
TGCGGAACGGAAGAAACCGGGGCCCCGGTGGCAGCTGTCGTCGATTACCT
CGAGGTCCGACGCATCCGTGCCAAGGCGAAGGCTGCCCACGCTATGGTCA
GCGACGTTGGCGACCAGAGCGAGCGTCTGTGCTCGTCAACCCGGGAGAAA
TCTTTGGTGTCCGCTAACTTTCAAGTTATTGATCTTCAGCGAATAGGCAA
GAGTGAAACCGCGGAGATGGATGTATCAGGAGTGTACAGAGGAGCTAGGC
TAGGGGCTGGCGAGATCTCAACGAGAAGTCAGGCAGGGGCCCCTGTGTTG
AATCCTCTGGAGCGCCAGGTGGATGAAGCCATTTTCTCGGCCTTTCGGAC
GGGAGACTTGTCGACCCTGCGCGATATCTTGTCGACGTCCCTCGCCTTCG
TCAACTATCGCCGTAGGATCGGCGACAGCACGACGGCGCTGATGGCCGCC
GCTTTCCATGGCGACATGGACGCTGTACGATATTTTTTGTCTCTCGGCGC
TAAGGCATCCTTGGTCGACACCTGCGGTAAGACAGCTGCGCTTTTGGCGG
GAATGCGAGGTCATCGGGACTGCTTCGCAGAGCTCCAACGCGTTGCGGAC
GAAGAGAGCGCTCAAGGGAAGGGACCTGGAGGTGTTCACGATTTCGTTTA
TGATCTCTACTACTTCAGTCCCGCCGAGTCGCGAGCAACGCCGCTGGGTA
GAAGAAGCGGGTCAGGCGACACGGCAAGTGTTGAGAAGGCTGGAGATGAG
ACACAAGCCTCCACACAATTTCCCGTCGTGCTACTCTCTGGCATCGGTCC
TATTGACGAAAACGCCACGGTGACGACGGGATTGGAGCTAACATTTGAGA
ACAATTCTGACTGGAGCGAGCCTGGCGACGATGCCGGGGAAGACCCCGAC
TCCAATTCGGAGGGGTTCTTCGCTAATGACTATCCCGAGGAAGAGGGTGA
AGAGGACGAAAGTGGACCACCTTACTTTGATCATGGGTCGTCTTCCTCCT
CGGAGAATGGAAGCAGCGGTGACGACGCGTTTTCCAGCGACGAGGCGACT
TAG
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