mRNA_A-nodosum_M_contig105.84.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A6H5KUZ7_9PHAE (Iwr1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ7_9PHAE) HSP 1 Score: 321 bits (823), Expect = 3.160e-96 Identity = 239/564 (42.38%), Postives = 311/564 (55.14%), Query Frame = 2
Query: 86 MSYAPFHPKSREALAAATAATAGVTVEEPRPRPHQVILRIKRKRGDLAVESIVVAAPEE--------VGPDRKRRLAAG-SIQDHFAELTLSKNCCEERDQQQEP-------------VQMAPHLFFKRAS----DNNIRLVEQGSSDPA-TPPAQVEMAETFRTGGGG------GKPGTLSRCGTEETGA-------PVAAVVDYLEVRRIRAKA-----KAAHAMVSDVGDQSERLCSSTREKSLVS--------ANFQVIDLQRIGKSE-TAEMDVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSL----AFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLVDTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVH---------------DFVYDLYYFSPAESRATP---------------LGRRSGSGDTASVEKAGDETQASTQF----PVVLLSGIGPIDENA--TVTTGLELTFENNSDWS---EPGDDAGEDPDSNSEGFFANDYPEEEGE 1486
MS AP KSR+A+AAA A + ++P P PH V+LR+KRKRGD AVES++VA +E + P+RKRR A SI + A L+L K +R QQ P +Q L +KR D + E+G S A PPA+ + A GG G+ L R T + P AAV DYLEVRR++A+A K + A V G + S + L AN VIDL +G+++ +A MD + G ++T +A AP+L P+ERQ+DEAIF+AF+TGD+S+LRDIL+TS A VNYRRR+GD++TALMAAAFHGD+ VRY LS+GAKA+LVD G++AAL AGMRGHR+CFAELQRVAD+E DFVYDLY++ P +T G SG+ T+S E G++T PVV LSGIGP+DENA T+ G+EL FE++SDWS E GDD GEDPDSNSEG++ NDYPE+EG+
Sbjct: 1 MSQAPVRRKSRKAVAAAMEKNAA-SQKKPAPAPHLVVLRVKRKRGDAAVESLLVATTDEGERIEEQEMMPNRKRRAAGTISIAETMAVLSLDKTAESQRQQQHSPXXXXXXXXXPAVKMQSPRRLVYKRVRTTEPDGSRDRGEEGRSPVAGAPPARQKRALDGGEEGGXXXXXXXGRLDALLRSKGLNTNSASCSPPPPTAAVFDYLEVRRVKARAVGIVPKNSPAPVDSSGRGGHKQHPSPQSSGLAPEGAATAAPANLHVIDLHAVGQADASAMMDTLVMGDAGAAGGAHVATAKRAAAPILTPVERQMDEAIFTAFQTGDMSSLRDILTTSSYPSPAGVNYRRRLGDASTALMAAAFHGDLGTVRYLLSIGAKATLVDAHGRSAALFAGMRGHRECFAELQRVADQEEXXXXXXXXXXXXXXXXXXXXXXXXXDFVYDLYFYEPPAQASTVGPPAVGAPAPGAGEGAGTPSGAVPTSSGE-LGEKTTIDAADGGAPPVVRLSGIGPVDENAVGTMAAGVELEFEHDSDWSGLGEEGDD-GEDPDSNSEGYYGNDYPEDEGD 561
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: D7FQE4_ECTSI (Heat shock protein, mitochondrial protein import, putative mitochondrial translocase complex subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE4_ECTSI) HSP 1 Score: 260 bits (665), Expect = 9.330e-74 Identity = 168/366 (45.90%), Postives = 214/366 (58.47%), Query Frame = 2
Query: 560 PVAAVVDYLEVRRIRAKA-----KAAHAMVSDVGDQSERLCSSTREKSLVS--------ANFQVIDLQRIGKSETAEM-DVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSL----AFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLVDTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVH---------------DFVYDLYYFSPAESRAT--------------PLGRRSGSGDTASVEKAGDETQASTQF-----PVVLLSGIGPIDENA--TVTTGLELTFENNSDWS---EPGDDAGEDPDSNSEGFFANDYPEEEGE 1486
P AAV DYLEVRR++A+A K + A G S + L S AN VIDL +G+++ + M D S + G +ST +A AP+L P ERQ+D+AIF+AF+TGD+S+LRDIL+TS A VNYRRR+GD++TALMAAAFHGD+ VR+ LS+GAKA+LVD G++AAL AGMRGHR+CFAELQRVAD+E DFVYDLYY+ PA +T + S K G++ PVV LSGIGP+DENA T+ G+EL FE++SDWS E GDD GEDPDSNSEG++ NDYPE+EG+
Sbjct: 81 PTAAVFDYLEVRRVKARAVGIVRKNSPAPADSSGRGGHEQDPSPQSSGLASDGAATAAPANLHVIDLHAVGQADASTMMDTSVMGDAGAAGGAHVSTAKRAAAPILTPAERQMDKAIFTAFQTGDMSSLRDILTTSSYPSPAGVNYRRRLGDASTALMAAAFHGDLGTVRHLLSIGAKATLVDAHGRSAALFAGMRGHRECFAELQRVADQEEXXXXXXXXXXXXXXXXXXXXXXXXXDFVYDLYYYEPAAQASTVGPPAVGAPAXXXXXXXXXPSAAVPTSCGKLGEKQTTINAAGGGAPPVVRLSGIGPVDENAVGTMAAGVELEFEHDSDWSGLGEEGDD-GEDPDSNSEGYYGNDYPEDEGD 445
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A6A3K4Y1_9STRA (Probable RNA polymerase II nuclear localization protein SLC7A6OS n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3K4Y1_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.460e-12 Identity = 132/473 (27.91%), Postives = 196/473 (41.44%), Query Frame = 2
Query: 128 AAATAATAGVTVEEPRPRPHQVILRIKRKRGDLAVESIVVAAPEEVGPDRKRRLAAGSIQD---HFAELTLSKN--CCEERDQQQEPVQMAPHLFFKRASDNNIRLVEQGSSDPATPPAQVEMAETFRTGGGGGKPGTLSRCGTEETGAPVAAVVDYLEVRR--IRAKAKAAHAMVSDVGDQSERLCSSTREKSLVSAN-FQVIDLQ-----RIGKSETAEMDVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSLAFVNYR----RRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLSGI-------GPIDENATVTTGLELTFENNSDWSEPGDDAGEDPDSNSEGFFANDYP 1471
AAA A+ A + +P V LR+KRKR D +E +VV + PD KR + G+ QD F +L+ ++ + D +EP +AP + +D R + A A+ ++A F P+A+ V++ R+KA+ M+ G Q REK + N +++DLQ K E E D + ++ ++ VLNP ER++DEAI+ AFR D + I + +R D +T +MAAA HG D + L G + L D G TAA+ A GH + E +A EE+ Q K D+VYD+Y + S R+ + DTAS + G + PVV +S P DE E E++ D ++ D ED SN E ANDYP
Sbjct: 20 AAARASRASKPKPQGNEKPSFVFLRLKRKRTDDPMECLVVHSE----PDTKR--SKGASQDLLQAFTKLSTTEKRFVFKHIDTMEEP--LAPGRV--KWTDRLKRKARSLKDERADMLAKKQIAPVFHKD-------------------PIASKQTERRVKQQQSRSKARRNEEMLKSRGLQP---LVEIREKQTMELNGIRLVDLQVSTVPNKEKEEKEEGDE--LLEKSKADLVTVNGARLKPTRVLNPHERELDEAIWKAFRVNDFAPFFQIYHARRPELRVDPVSFQRPADGSTIVMAAALHGRSDVIEVLLRAGTTSILQQDWEGATAAVFAKRGGHAN--VETALLACEEAEQEK------DYVYDVYCVDISASE-----RQDSAHDTASSSEEGSGQTSVNGVPVVSVSSEVHRWLSEEPSDEVE------EYMLESDIDSNDEVDGLSED--SNDEDHVANDYP 437
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: G5AF95_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AF95_PHYSP) HSP 1 Score: 80.1 bits (196), Expect = 3.620e-12 Identity = 116/427 (27.17%), Postives = 184/427 (43.09%), Query Frame = 2
Query: 107 PKSREALAAATAATAGVTVEEPRP-------RPHQVILRIKRKRGDLAVESIVVAAPEEVGPDRKRRLA-AGSIQDHFAELTLSKN--CCEERDQQQEPVQMAPHLFFKRASDNNIRLVEQGSSDPATPPAQVEMAETFRTGGGGGKPGTLSRCGTEETGAPVAAVVDYLEVRRIRAKAKAAHAMVSDVGDQSERLCSSTREKSLVSANFQVIDLQ----RIGKSETAEMDVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSLAFVNYR----RRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYY--FSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLS 1324
P + AA +ATA +P +P V LR+KRKR D +E +VV E PD KR A + F +L+ ++ + D +EP+ + +R R ++ +D A+ ++A F+ K T S+ TE ++ ++ R+KA+ M+ G Q + ++++ +++DLQ K E E V+ V ++ ++ VLNP ER++DEAI++AFR D + I + +R D +T LMAAA HG D + L G + L D G TAA+ A GH + E +A EE+ Q K D+VYD+Y S +ES+ T + DTA+ + G E + PVV +S
Sbjct: 10 PSTSTGARAAPSATAARVTRASKPSTEGANEKPSYVFLRLKRKRTDDPMECLVVQQSE---PDAKRSKGKAEDLLQAFTKLSTTEKRFVFKHIDTMEEPIAPGRVKWTERLK-RKARSLKDERADML---AKKQIAPVFQ------KDPTASKQ-TERR----------VKQQQSRSKARRNEEMLKSRGLQP--VVEIKEKQTMELHGIRLVDLQVSTVASSKEEKKEEGVT-VLEKSKTDLVTVNGARLKPTRVLNPHERELDEAIWNAFRANDFAPFFQIYHARRPELRVDPVSFQRPADGSTILMAAALHGRSDVIEVLLRSGTTSVLQQDWEGATAAVFAKRGGHDN--VETALLACEEAEQEK------DYVYDVYCVDISASESQGT-------AHDTATSSEDGAEQTSVNGVPVVSVS 394
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A0P1ASE5_PLAHL (Transcription factor Iwr1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASE5_PLAHL) HSP 1 Score: 79.7 bits (195), Expect = 5.600e-12 Identity = 131/468 (27.99%), Postives = 199/468 (42.52%), Query Frame = 2
Query: 134 ATAATAGVTVE-EPRPRPHQVILRIKRKRGDLAVESIVVAAPEEVGPDRKRRLAAGSIQDHFAELTLSKN--CCEERDQQQEPVQMAPHLFFKRASDNNIRLVEQGSSDPATPPAQVEMAETFRTGGGGGKPGTLSRCGTEETGAPVAAVVDYLEVRRIRAKAKAAHAMVSDVGDQSERLCSSTREKSLVSANFQVIDLQRIGKSETAEMDVSGVYRGARLGAGEISTRSQAGAP--VLNPLERQVDEAIFSAFRTGDLSTLRDIL----STSLAFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFS-PAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVV--------LLSGIGPIDENATVTTGLELTFENNSDWSEPGDDAGEDPDSNSEGFFANDYPEEE 1480
AT A+ +TV+ + + +P V L +KRKR D + +VV + PD KR + + FA+L+ K + D +E V + H + + R +++ + A A+ F+ G K TE+ ++ ++ R+KA+ + G + T++ L +++DLQ + ++V G + A ++ P VLNP ER++DEAI++AFRT D + I S A +R D +T LMAAA HG D + L G + L D G TAA+ A GH + L+ A EE+ + K D+VYD+Y A + PL + S D A + K A P+V LS P DE E E++ D SE D G DSN E ANDYP+EE
Sbjct: 14 ATKASHSLTVKLDEQKKPSFVFLSLKRKRTDEPMNCLVVQSE----PDSKRYKT--DLLEAFAQLSTGKKRFVFKHIDTMEESV-ASGHAKWTQRLKRKARTLKE---EHANMMAKKHQISVFQKEFGASKQ-------TEKR----------VKQQQCRSKARRNENVFQSRGLNAFVEIKETQKIEL--GGIRLVDLQ-MSSDSNPNIEVGVEKNGTKSNADLVTINGVTLKPTRVLNPYERELDEAIWAAFRTNDFAPFFRIYHAQQSEQRAIPTTFQRPVDGSTILMAAALHGRNDVIEVLLRSGNLSILQQDWEGATAAMFAERGGHLNVATALR--ACEEAEREK------DYVYDVYCVDLEATEKQDPL--QDSSTDLADISKQIGVNSA----PIVNVSSEVHHWLSRDTPSDEVE------EYVLESDLDSSE---DDGLSEDSNGEDNAANDYPDEE 428
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: M4BAP8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAP8_HYAAE) HSP 1 Score: 76.3 bits (186), Expect = 5.260e-11 Identity = 107/396 (27.02%), Postives = 161/396 (40.66%), Query Frame = 2
Query: 179 RPHQVILRIKRKRGDLAVESIVVAAPEEVGPDRKR-RLAAGSIQDHFAELTLSKN--CCEERDQQQEPVQMAPHLFFKRASDNNIRLVEQGSSDPATPPAQVEMAETFRTGGGGGKPGTLSRCGTEETGAPVAAVVDYLEVRRIRAKAKAAHAMVSDVGDQSERLCSSTREKSLVSANFQVIDLQRIGKSETAEMDVSG------VYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTLRDILSTSL----AFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLS 1324
RP V LR+KRKR D ++ +VV + PD KR + + + F +L+ + + D +PV + +R R + A A+ +A F+ G KP TL R +++ + + L R ++ K +V RL + QV + +SE + V GARL S R VLNP ER++DEAI+ AFR+ D + I A +R D +TALMAAA HG D + L A + L D G TAA+ A GH C E +A E+ + K D+VYD+Y + S + G T E + ++T + P+V +S
Sbjct: 18 RPAFVFLRLKRKRTDERMDHLVVYSE----PDSKRIKNGSSDLLQAFTKLSTTDKRFVFKHIDTMDDPVASERAKWMERLK----RKARSLQDERAVLMAKKPVASVFQPDVAGLKP-TLQRVKQQQSRSKALRSEEMLRARGLQPVVKITEKQTREV--HGIRL-----------VDLQVSPSSGVEESEKKQNQVDEDNAEIVTVNGARL----KSMR------VLNPYERELDEAIWMAFRSNDFAPFFQIYHAQRPELGASPTSFQRPADGSTALMAAALHGRSDVIEVLLRSDAASVLQEDWTGATAAMFANHGGH--CNVETALLACEKVEREK------DYVYDVYCVDTSASGGQDIA----CGATTRSENSSEQTSVN-DVPIVSVS 368
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A484EGW7_BRELC (Probable RNA polymerase II nuclear localization protein SLC7A6OS n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGW7_BRELC) HSP 1 Score: 72.8 bits (177), Expect = 8.670e-10 Identity = 81/275 (29.45%), Postives = 119/275 (43.27%), Query Frame = 2
Query: 683 KSLVSANFQVIDLQRIGKSETAEMDVSGVYRGARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTL--------RDILSTSLAFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLV-DTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLSGIGPIDENATVTTGLELTFENNSDWSEPGDDAGEDPDSNSEGFFANDYPEEE 1480
KS ++ N ++ D R+ KS + + V+G+ ++ VLNP ER++DEAI++AFR D + +D L +AF +R D + LMAAA HG D + L G + L D G TAA+ A GH D E +A E++ K D+VYD+Y + S G ++ G E S P++ +S + + F SD +D G DSN E ANDYP+EE
Sbjct: 185 KSTLALNEKMED--RLTKSSRSAVTVNGIRMKSKR--------------VLNPYERELDEAIWTAFRANDFAPFFRIYYTRRQDGLVDPVAF----QRTADGSNILMAAALHGRSDVIEVLLRSGTTSVLQQDFVGVTAAIFARRGGHAD--VEKALLACEQAEHEK------DYVYDVYCVDMSAS---------GDAQGPTMILNGKEKTVS-NVPIISVSSEVHHWLSEDILRNEVENFMLESDLDSSDEDDGLSEDSNDEDNVANDYPDEE 421
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: F0W0W7_9STRA (Angioassociated migratory cell protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0W7_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.220e-9 Identity = 71/224 (31.70%), Postives = 100/224 (44.64%), Query Frame = 2
Query: 830 VLNPLERQVDEAIFSAFRTGDLSTLRDILSTSLA------FVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSL-GAKASLVDTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGDETQASTQFPVVLLSGIGPIDENATVTTGLELTFENNSDWSEPGDDAGEDPDSNSEGFFANDYPEEE 1480
VLNP++R+VDEAI+ AF+ D S IL A +N+ R + D +T LMAAAFHG +D + L + G K L D G A+ A H L +A E + + K FVYDLY + +T T S+ G + V + ++ G F +SD S D+ GE +SN E ++ NDYP+EE
Sbjct: 654 VLNPMQREVDEAIWKAFQQNDFSAFFQILHCEKAEQSMPKVLNFARPL-DGSTVLMAAAFHGRVDVIESLLQVTGIKVLLRDLEGSAASDFAARNKHLSVQEAL--IACETTEREKA------FVYDLYCVESVPTTST----------TESLANDGLDIPVVHVNETVQQWLVDGLNNFQKAEDGEIEDFVFDSDNSIDQDEDGESLNSNDEDYYLNDYPDEE 858
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A835YSD4_9STRA (Alkaline-phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD4_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.370e-9 Identity = 45/91 (49.45%), Postives = 54/91 (59.34%), Query Frame = 2
Query: 830 VLNPLERQVDEAIFSAFRTGD-LSTLRDILSTSLAFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAKASLVDTCGKTAALLAGMRGH 1099
VL P+ER DEAI+ AFR G + L ++L A VN+ R D TT LMAAA+ GD V L+LGA +VD G TAA LA M GH
Sbjct: 881 VLTPMERLTDEAIWHAFRDGGGAARLLEVLQQGGAGVNFTRTHADGTTPLMAAAYCGDGAVVTRLLALGAGPCVVDYSGNTAAKLASMNGH 971
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Match: A0A1V9ZB65_9STRA (Probable RNA polymerase II nuclear localization protein SLC7A6OS n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB65_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.270e-9 Identity = 70/247 (28.34%), Postives = 110/247 (44.53%), Query Frame = 2
Query: 776 GARLGAGEISTRSQAGAPVLNPLERQVDEAIFSAFRTGDLSTL-----RDILSTSLAFVNYRRRIGDSTTALMAAAFHGDMDAVRYFLSLGAK-ASLVDTCGKTAALLAGMRGHRDCFAELQRVADEESAQGKGPGGVHDFVYDLYYFSPAESRATPLGRRSGSGDTASVEKAGD-----ETQASTQFPVVLLSGIGPIDENATVTTGLELTFE-NNSDWSEPGDDAGEDPDSNSEGFFANDYPEEE 1480
G + R++A V+NP+ERQVDEAI++AF+ D S + + +T+L + ++R D + LMAAA H D + L++ +K L D GK+A +A +GH L+ E + +VYD+Y + +++ P V + + ETQ P EL F+ ++SD + +D D DSN EG+ ANDYP+EE
Sbjct: 152 GPAIAVNGAELRAKALKRVMNPMERQVDEAIWTAFQKNDFSAFFRLQQQQVKATTLNPLLFQRP-ADGGSILMAAAMHNRTDVIEALLAIDSKHVVLRDYNGKSAGDIAADQGHAAAATALRACETVEDDK--------QYVYDVYSVDVSATKSLPAPAELDDVPVVEVSTSVEKWLMYETQGDMDSP------------------DRELLFDVSDSDKDDMHED---DEDSNDEGYVANDYPDEE 368 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig105.84.1 >prot_A-nodosum_M_contig105.84.1 ID=prot_A-nodosum_M_contig105.84.1|Name=mRNA_A-nodosum_M_contig105.84.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=501bp MSYAPFHPKSREALAAATAATAGVTVEEPRPRPHQVILRIKRKRGDLAVEback to top mRNA from alignment at A-nodosum_M_contig105:850726..853958- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig105.84.1 ID=mRNA_A-nodosum_M_contig105.84.1|Name=mRNA_A-nodosum_M_contig105.84.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3233bp|location=Sequence derived from alignment at A-nodosum_M_contig105:850726..853958- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig105:850726..853958- >mRNA_A-nodosum_M_contig105.84.1 ID=mRNA_A-nodosum_M_contig105.84.1|Name=mRNA_A-nodosum_M_contig105.84.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1503bp|location=Sequence derived from alignment at A-nodosum_M_contig105:850726..853958- (Ascophyllum nodosum dioecious)back to top |