mRNA_A-nodosum_M_contig105.70.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig105.70.1
Unique NamemRNA_A-nodosum_M_contig105.70.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: D7FQD7_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD7_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 4.050e-123
Identity = 184/225 (81.78%), Postives = 211/225 (93.78%), Query Frame = 3
Query:  393 TPSSVEEVTIIKNSLLQVAAMTERGQLANDEQRNDVELLVGRLEELKEED--QPYNDENMVGIWTLVYSSSQAFRSSPFFATFQALLGREGVAERIFTFTDEFPNAKIGQARQIVSEDCTELLSRVEMSLWPHRWISGVVETRSRIVNDDVGDRLEVIVDSTRVKESILGKISPRLEGWQVPVDQLSERIFDRIPRITLETVFLDQDLRISRLPDRNFLIYIKDY 1061
            TP+ V+E+T+IKNSLLQVAAMTERGQLA + Q+ND++LL+ RLEELK E+  +PY DENMVG WTLVYSSSQAFRSSPFFATFQAL+G++GVAERIF+FTD FPNAKIGQARQIV+EDCTELLSRVEMS+WPHRWISGVVETRS+IVNDD+GD+LEVIVD TRV +SILGKISPRLE  +VPVDQLSER+FDRIPRITL+TVFLDQDLR+SRLPDRNFL+Y+KDY
Sbjct:   59 TPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMVGTWTLVYSSSQAFRSSPFFATFQALIGKDGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDDIGDQLEVIVDDTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLVYVKDY 283          
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: A0A835ZIJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ0_9STRA)

HSP 1 Score: 171 bits (432), Expect = 2.110e-46
Identity = 90/197 (45.69%), Postives = 126/197 (63.96%), Query Frame = 3
Query:  486 QRNDVELLVGRLEELKEEDQPYNDENMVGIWTLVYSSSQAFRSSPFFATFQALLGREGVAERIFTFTDEFPNAKIGQARQIVSED-----CTELLSRVEMSLWPHRWISGVVETRSRIVNDDVGDRLEVIVDSTRVKESILGKISPRLEGWQ-VPVDQLSERIFDRIPRITLETVFLDQDLRISRLPDRNFLIYIKD 1058
            QR+DVELLV RL+EL   ++P+N ++M+G WTLVYSS + FR  P FA  QAL G      R++      P A++G  +Q ++       C   L  + + ++P  ++ G +ET +RIVNDD+GD LEVIV+ + V ES L +  P   G   VPV +LSER FDR+PR+ LET++LD D R++RLPD   LIY+KD
Sbjct:    2 QRDDVELLVTRLQELVPAEEPFNGDDMLGSWTLVYSSGEVFRGDPVFAHIQALAGNPLWPNRVYRMAGAMPTARVGTVQQTIAAGGEEGRCKRCLV-IRLEVFPWNYLQGTIETEARIVNDDIGDGLEVIVERSAVTESPLTRFWPGKNGPPAVPVARLSERFFDRLPRLALETLYLDSDFRVTRLPDDTLLIYVKD 197          
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: A0A7S0WSZ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WSZ6_9CHLO)

HSP 1 Score: 104 bits (259), Expect = 1.720e-21
Identity = 79/224 (35.27%), Postives = 121/224 (54.02%), Query Frame = 3
Query:  399 SSVEEVTIIKNSLLQVAAMTERGQLANDEQRNDVELLVGRLE--ELKEEDQPYNDENMVGIWTLVYSSSQAFRSSPFFATFQ-ALLGREGVAERIFTFTDEFPNAKIGQARQIVSEDCTELLSRVEMSLWPHRWISGVVETRSRIVNDDVGDRLEVIVDSTRVKESILGKISPRLEGWQVPVDQLSERIFDR-IPRITLETVFLDQDLRISRL-PDRNFLIYIK 1055
            SSV   + +K  LL+  A  +RGQ+A + Q+ ++E+++ +LE  +    +Q    E + G W LVY+S +AFRSSPFF  FQ  L+G E +A  IF FTD  P A +GQA Q    +  E +S V++ ++P     G V T S +        L + V++TRV  S L  +   L+   VPV  + E +  R    ++ +  FLD +LR++R  PD    +Y K
Sbjct:   31 SSVAVDSDLKKVLLRHVAGIDRGQVATESQKQEIEMVISQLEASQAPMSEQLEVQEALQGKWQLVYTSVEAFRSSPFFWAFQEGLVGSEELASAIFKFTDAIPGATVGQAFQTFDFNTGECVSEVDLEVFPGA--KGCVVTTSTVRCSTPPTCLVLTVENTRVARSNL--LPFLLDSVVVPVKDVVEAVRGRGKTAVSADMTFLDGELRVARTRPDGAIFVYRK 250          
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: A0A1X6P059_PORUM (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P059_PORUM)

HSP 1 Score: 102 bits (255), Expect = 3.390e-20
Identity = 72/215 (33.49%), Postives = 113/215 (52.56%), Query Frame = 3
Query:  417 TIIKNSLLQVAAMTERGQLANDEQRNDVELLVGRLEELKEEDQPYNDENMVGIWTLVYSSSQAFRSSPFFATFQALLGREGVAERIFTFTDEFPNAKIGQARQIVSEDCTELLSRVEMSLWPHRWISGVVETRSRIVNDDVGDRLEVIVDSTRVK-ESILGKISPRLEGWQVPVDQLSERIFD-RIPRITLETVFLDQDLRISRLPDRNFLIYIK 1055
            T +K  LL++AA T+RGQLA   Q+  VE LV  LE     D P +   + G W LVY+S   F+++P                         P   +GQ +Q++  D  EL++ VE++ +P   I+G V T +R V    G+RLE++V+ T VK +S+ GK+     G  +PV+QL  ++ +  +P   L+T +LD+ +RISR    +  +Y K
Sbjct:  160 TEMKGKLLEIAAATDRGQLATSAQKEAVEDLVSMLEAANPTDSPVDTALIDGTWLLVYASKPLFKTTP------------------LLLAAATPLLVVGQVKQMLRVDSGELVNDVEVTAFP--MITGTVSTTAR-VTPITGERLELVVEKTGVKGKSLAGKLDLGGLGGSLPVEQLYGKLKNGAVPETFLDTFYLDEKMRISRGKGGSIYVYTK 353          
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: A0A5J4Z5Z5_PORPP (Light-induced protein, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5Z5_PORPP)

HSP 1 Score: 100 bits (250), Expect = 3.210e-19
Identity = 72/214 (33.64%), Postives = 113/214 (52.80%), Query Frame = 3
Query:  420 IIKNSLLQVAAMTERGQLANDEQRNDVELLVGRLEELKEEDQPYNDENMVGIWTLVYSSSQAFRSSPFFATFQALLGREGVAERIFTFTDEFPNAKIGQARQIVSEDCTELLSRVEMSLWPHRWISGVVETRSRIVNDDVGDRLEVIVDSTRVKE-SILGKISPRLEGWQVPVDQLSERIFDRIPRITLETVFLDQDLRISRLPDRNFLIYIKD 1058
            ++K  L+ +AA + RGQ A+  QR+ +E+L  RLEEL     P +   + G+W L+YSS+Q +++SPF      LLG               P  ++G  RQ +  D  E ++ V ++ +P   ISG V T  RI     G RLE  V+ T +K  SI G++   +    +PV Q+ ER+   +P    +TV+LD  +RISR  +    I++K+
Sbjct:  224 VLKTRLVTLAAASNRGQSASVTQRDLIEVLAKRLEELNPNPDPVDMPMIDGVWDLIYSSTQLYKTSPF------LLGAAT------------PLVQVGLVRQTIFVDSGEAINEVSVTSFPA--ISGRVITTMRIAPVS-GKRLECKVEKTELKGGSIAGRLDIGMLDVDIPVQQVVERLNGTVPETFFDTVYLDDLMRISRSKNGALYIFVKE 416          
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: B8BQA8_THAPS (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQA8_THAPS)

HSP 1 Score: 98.2 bits (243), Expect = 5.710e-19
Identity = 76/221 (34.39%), Postives = 118/221 (53.39%), Query Frame = 3
Query:  423 IKNSLLQVAAMTERGQLANDEQRNDVELLVGRLEELKEEDQPYNDENMVGIWTLVYSSSQAFRSSPFFATFQALLGR--EGVAERIFTFTDEFPNA-KIGQARQIVSEDCTELLSRVEMSLW-----PHRWISGVVETRSRIVNDDVGDRLEVIVDSTRVKESILGKISPRLE--GWQVPVDQLSERIFDRIPRITLETVFLDQDLRISRLPDRNFLIYIK 1055
            +K  LL ++++T RGQ A+ E+ N V  LV +LE L     P    N  G W L YSS+Q+FRSSPFF   ++ +G   + +AE  F   D    A ++G+ RQIV     EL+S  E+S+      P R + G V T S  +     +  E+ V +T+VK S +      L+  G ++PV +  + I   +P   L+T ++D+ +RISR  D NF ++ +
Sbjct:   86 LKRELLLLSSVTNRGQCASQEEENLVVDLVTQLEALNPTADPAL--NSQGDWELCYSSTQSFRSSPFFLAIRSFMGESNKSMAENAFDIHDRATTASRVGKVRQIVDAGNMELISEYELSVGLLPGLPVR-VKGTVIT-SADMRAIAPETWELTVKATKVKGSNVPFFDQYLDDSGLELPVGEAYKAISGSVPVSVLKTFYVDEGMRISRDVDDNFFVFTR 302          
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: K0SUV6_THAOC (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUV6_THAOC)

HSP 1 Score: 96.7 bits (239), Expect = 3.820e-18
Identity = 82/217 (37.79%), Postives = 117/217 (53.92%), Query Frame = 3
Query:  423 IKNSLLQVAAMTERGQLANDEQRNDVELLVGRLEELKEEDQPYNDENMVGIWTLVYSSSQAFRSSPFFATFQALLGREG--VAERIFTFTDEFPNA-KIGQARQIVSEDCTELLSRVEMSLW-----PHRWISGVVETRSRIVNDDVGDRLEVIVDSTRVKESILGKISPRLEGWQV--PVDQLSERIFDR-IPRITLETVFLDQDLRISRLPDRNF 1040
            +K  L+ +A+ T RGQ A  E++N V  LV +LE L     P    N  G W L YSS+Q+FRSSPFF   +A LG +   VAE  F+  D    A ++G+ RQI+    TEL+S  ++S+      P R + G V T S  ++    +  E+ V  TRVK S +  I   L+  QV  PV ++ E I    +P   L+T ++D+ +RISR  D NF
Sbjct:   76 LKRELILLASTTNRGQCATLEEQNLVIDLVTQLEALNPTADPAL--NSQGDWELCYSSTQSFRSSPFFLAIRAFLGDDNKEVAENAFSIHDMATTASRVGKVRQIIDSYNTELISEYDLSVGVAPGLPVR-VKGCVVT-SADLSVSAPETWEMKVRGTRVKSSNVPFIDEWLDDSQVEVPVGRVYEAINGGDVPAAILKTYYVDEGMRISRDADENF 288          
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: A0A7S2Y236_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y236_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 8.180e-18
Identity = 71/220 (32.27%), Postives = 120/220 (54.55%), Query Frame = 3
Query:  423 IKNSLLQVAAMTERGQLANDEQRNDVELLVGRLEELKEEDQPYNDENMVGIWTLVYSSSQAFRSSPFFATFQALLG--REGVAERIFTFTDEFPNA-KIGQARQIVSEDCTELLSRVEMSLWPHR--WISGVVETRS--RIVNDDVGDRLEVIVDSTRVKESILGKISPRLEGW--QVPVDQLSERIFDRIPRITLETVFLDQDLRISRLPDRNFLIYIK 1055
            +K  LL +++++ RG+ A+ + +N +  LV +LE L   + P       G W L  SS+Q FRSSPFF T +A +G   + +AE  F   D    A +IG+ RQ +  D       +E+ ++P     + G V TR+  R V+ +     E+ V +T VK S +  ++  L+    ++PV+Q+ ERI   +P + L+T ++D+ +RI+R  D NF +Y +
Sbjct:   84 LKRELLLLSSVSNRGEFASLDDQNVITDLVAQLEALNPTEDPAM--KCEGEWDLALSSTQFFRSSPFFLTIRAAMGASNKAMAENAFDIHDRATTAGRIGRVRQTIVGDTLTSEVDLEVGVFPGLPFRVKGSVITRASFRPVSSETA---ELQVGATEVKGSNIPILNQYLDNLKLELPVNQIFERIQGSVPTVELKTYYIDEGMRITRDMDDNFFVYTR 298          
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: A0A0D2KT63_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KT63_9CHLO)

HSP 1 Score: 95.1 bits (235), Expect = 1.120e-17
Identity = 67/174 (38.51%), Postives = 97/174 (55.75%), Query Frame = 3
Query:  570 GIWTLVYSSSQAFRSSPFFATFQALL-------GREG--------VAERIFTFTDEFPNAKIGQARQIVSEDCTELLSRVEMSLWPHRWISGVVETRSRIVNDDVGDR-------LEVIVDSTRVKESILGKISPRLEGWQVPVDQLSERIF-DRIPRITLETVFLDQDLRISR 1022
            G W L+Y++++AFR+SPFFA+F  ++       G  G        +A+ IF FTD  P A IG A QI++     L+S V++S++P   + G V TRSR+               LE+ V+STRV+ S     SP L+   VPV+QL ER+      R+T E  FLDQ+LR++R
Sbjct:  163 GRWELLYANTEAFRNSPFFASFSNVVSGLADVAGLSGTIDVPNGALADAIFAFTDAIPGATIGAAYQIITPGA--LVSEVDLSVFPG--LRGTVVTRSRLERPATAGGAGGAPQVLELFVESTRVERS---NFSPLLDQVSVPVEQLIERLRGSEAARVTYEVTFLDQNLRVTR 329          
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Match: A0A7S2Q3I4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3I4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.840e-17
Identity = 73/220 (33.18%), Postives = 118/220 (53.64%), Query Frame = 3
Query:  423 IKNSLLQVAAMTERGQLANDEQRNDVELLVGRLEELKEEDQPYNDENMVGIWTLVYSSSQAFRSSPFFATFQALLGREG--VAERIFTFTDEFPNA-KIGQARQIVSEDCTELLSRVEMS--LWPHR--WISGVVETRSRIVNDDVGDRLEVIVDSTRVKESILGKISPRLEG--WQVPVDQLSERIFDRIPRITLETVFLDQDLRISRLPDRNFLIYIK 1055
            +K  L+ ++++T RG  A  E+ N V  LV +LE L     P    N  G W L YSS+Q+FRSSPFF   ++ LG +   +AE  F   D    A ++G+ RQI+ ++  EL+S  E+S  L P     + G V T + + +    +  E+ V  T+VK S +  +   L+    +VPV +  + +   +P  TL+T ++D+ LRI+R  D NF ++ +
Sbjct:   66 LKRELILLSSVTNRGSCATTEESNLVVDLVTQLEALNPTADPAA--NCQGDWELCYSSTQSFRSSPFFLAIRSFLGDDNKQIAESAFDIHDAATTASRVGKVRQIIDKNNNELVSEYEVSVGLLPGLPVQVKGTVITSAEM-SVIRPESWELEVKGTKVKGSNVPFLDAFLDDSDLEVPVGEAYKAVSGAVPVSTLKTFYVDEGLRITRDVDENFYVFTR 282          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig105.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQD7_ECTSI4.050e-12381.78PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A835ZIJ0_9STRA2.110e-4645.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0WSZ6_9CHLO1.720e-2135.27Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A1X6P059_PORUM3.390e-2033.49PAP_fibrillin domain-containing protein n=1 Tax=Po... [more]
A0A5J4Z5Z5_PORPP3.210e-1933.64Light-induced protein, chloroplastic n=1 Tax=Porph... [more]
B8BQA8_THAPS5.710e-1934.39PAP_fibrillin domain-containing protein n=1 Tax=Th... [more]
K0SUV6_THAOC3.820e-1837.79PAP_fibrillin domain-containing protein n=1 Tax=Th... [more]
A0A7S2Y236_9STRA8.180e-1832.27Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A0D2KT63_9CHLO1.120e-1738.51Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
A0A7S2Q3I4_9STRA2.840e-1733.18Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig105contigA-nodosum_M_contig105:700722..705171 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQD7
PFAMsPAP_fibrillin
Model size1668
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons8
Evalue5.08e-128
EggNOG OGs2CY64@1|root,2S2BE@2759|Eukaryota
Ec32 ortholog descriptionPlastid lipid-associated protein/fibrillin conserved domain
Ec32 orthologEc-01_006500.1
DescriptionPAP_fibrillin
Cds size855
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866427.7844145-UTR-A-nodosum_M_contig105:700721..7009361680866427.7844145-UTR-A-nodosum_M_contig105:700721..700936Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig105 700722..700936 +
1680866427.8877294-UTR-A-nodosum_M_contig105:704443..7048031680866427.8877294-UTR-A-nodosum_M_contig105:704443..704803Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig105 704444..704803 +
1680866427.897749-UTR-A-nodosum_M_contig105:704933..7051711680866427.897749-UTR-A-nodosum_M_contig105:704933..705171Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig105 704934..705171 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866427.8029525-CDS-A-nodosum_M_contig105:700936..7009771680866427.8029525-CDS-A-nodosum_M_contig105:700936..700977Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 700937..700977 +
1680866427.815391-CDS-A-nodosum_M_contig105:701439..7015511680866427.815391-CDS-A-nodosum_M_contig105:701439..701551Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 701440..701551 +
1680866427.8239655-CDS-A-nodosum_M_contig105:701886..7019611680866427.8239655-CDS-A-nodosum_M_contig105:701886..701961Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 701887..701961 +
1680866427.8357396-CDS-A-nodosum_M_contig105:702165..7022881680866427.8357396-CDS-A-nodosum_M_contig105:702165..702288Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 702166..702288 +
1680866427.849262-CDS-A-nodosum_M_contig105:702595..7028161680866427.849262-CDS-A-nodosum_M_contig105:702595..702816Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 702596..702816 +
1680866427.8659055-CDS-A-nodosum_M_contig105:703317..7034821680866427.8659055-CDS-A-nodosum_M_contig105:703317..703482Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 703318..703482 +
1680866427.879336-CDS-A-nodosum_M_contig105:704325..7044431680866427.879336-CDS-A-nodosum_M_contig105:704325..704443Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig105 704326..704443 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig105.70.1prot_A-nodosum_M_contig105.70.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig105 700937..704443 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig105.70.1

>prot_A-nodosum_M_contig105.70.1 ID=prot_A-nodosum_M_contig105.70.1|Name=mRNA_A-nodosum_M_contig105.70.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=285bp
MRFLFIVVLPPFVTCFMCNGPGREGGRQAIFKGRQYPSYSSSGSISTDKR
QARWMTFSSTPSSVEEVTIIKNSLLQVAAMTERGQLANDEQRNDVELLVG
RLEELKEEDQPYNDENMVGIWTLVYSSSQAFRSSPFFATFQALLGREGVA
ERIFTFTDEFPNAKIGQARQIVSEDCTELLSRVEMSLWPHRWISGVVETR
SRIVNDDVGDRLEVIVDSTRVKESILGKISPRLEGWQVPVDQLSERIFDR
IPRITLETVFLDQDLRISRLPDRNFLIYIKDYYE*
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mRNA from alignment at A-nodosum_M_contig105:700722..705171+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig105.70.1 ID=mRNA_A-nodosum_M_contig105.70.1|Name=mRNA_A-nodosum_M_contig105.70.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4450bp|location=Sequence derived from alignment at A-nodosum_M_contig105:700722..705171+ (Ascophyllum nodosum dioecious)
CCTCCTTTTCCTCTTTTTTTCCCGCCTATTTAAAGTCGAAAACATCTGTC CCATTATACCAAAAAGGGGCTCGGGGACACACTCATCTTCCCAATATCTC ATTGATTCCAACAAGAGATAATATTACTATTAAATAGTATTATTCAACGA AAGGAACTAAGCTTGTTGTACTCTCCGTGCGCGCGGCTAGCTGGAGGACT GGAGCGCTGGTCACCATGCGATTCCTCTTCATCGTGGTCCTTCCACCTTT TGTGACGTAAGAAGATGTTGAATTTACTGTAAGATACAACAGCAGTAACC ACAACAGTATGACTGTAAGTACTCTTTGCTCCTACTTGTACCACTTCAAG ACTACGAGCCTTTTCTTCCAGTAGGTGCTGTACCGTACTTGTTTAAAAAT CTGAACGCATCTAAGCCTTGTTGTACTACCTGTATCGTAGTACAGGTACA GGTATCATATCATCGCTACATACAACGATTTGACTTCGAATACATGGACG AAGTGCGTTTCAAATATGGGTGCCAGTAACAATATGCATCTCTTCAGCAC AAAGACACCAGTTGAGAAGTAGTTCTCGCTTCCGCCGTCTGAGCACCCAA TTGAATGACTTCGAATCACCAGTGACAACACACGCAGCGATCTTGAGTAC TTGTACGTACCTTTCTTTTATTTACAGTTAGACATAATATCAAATGTCCC GTAGCGTCGTTCGCGCAGTTGCTTCATGTGCAACGGCCCTGGGAGGGAGG GTGGACGTCAAGCTATCTTTAAGGGCCGACAATACCCGAGTTATTCGAGT TCAGGATCGATCTCAACCGACAAGCGGCAGGTGTGTCTCTGTGCCATACC GGGTGTTCATAGGCCGGCGCTTTTGACGCTCTAGACCGTAGTCCGTACAC AACAACTGATTGTCGGCCAAAATGGCCAGAATTCCCTTTTCTGTACAAAT GGCCTAGAGATCCTCCTGGCCTGTTATAGCGCGATGCACACCTCAATGAC GACGCAACATGTCGATGCGATGCGCGTATTGATACACCGGTAAGTGTTTG GCGATTATGTACATATGTAGTGTGCTTCCTATTAATACTACATGTTAAGT TAAAGGCGTTCTATTCCCCCTTCTCCGCTGCTCTCTGCTATCATATCTGC CATCATTTTCAATAGGCTCGATGGATGACCTTTTCGAGCACGCCATCTAG CGTTGAAGAGGTCACCATCATCAAGAATTCGCTGCTGCAGGTGACGACGC ACCAAGTGCGCGGGCGAATGGAGGGGCACCCTTAATAAATAGATTGCCAG TCACGCGCCCTTCTGCCGCGTCCGACTACGTCTTGATTTGCCTACGCGTG CTCTTCCCTAACGAGACAAGACTTGCACTATAGCTCTATTATTAGTAGCT CCCGTGATGATTTCAAAGACCACGTCGAACGGCAACACTTGAAGGTGGCG GCGATGACAGAGCGAGGCCAGTTGGCAAACGATGAGCAACGAAATGATGT AGAACTTCTCGTGGGACGCCTAGAGGAGCTCAAGGAGGAGGATCAACCGT ATAATGATGAGAACATGGTGAGAGGCACTCGCCGTCTTCGTGAACTCTTC TTTAGATGTCCTGACTTCTCCCCAGGAGTAGTTTCTTTTGTACTGAGTTA TGTAATGTAATGTACGAACTGCACGAGTATAGCGCCCACGTTAATTGCCT CGTGGGCATTTCGTCTTGATAACTGGAGCAAATGGATCGGATCGGTTGAC CGTTGTGTTTTAACAGATTCCACATTTTGATGCCACATGGTAAAACTAAA CTGGAGTTCCCACTTTTTAAAACTAGCCTTTATGCCATGGGGAAATCACA TTACTCCCCCGGGGTTGTTGGCAGGTCGGAATTTGGACTCTGGTGTACTC GTCCTCTCAGGCGTTTCGGTCGAGTCCTTTTTTCGCCACATTCCAGGCGT TGCTCGGCCGTGAGGGTGTCGCGGAGAGGATTTTCACCTTCACGGACGAG TTCCCCAACGCGAAGATAGGACAGGCGAGACAGATCGTTAGCGAGGACTG CACGGAGCTTCTATCGCGCGTGGAGATGTCTCTCTGGCCTCACAGGTGAC GGCTGCCAGAAAAATGTACTCCGAAGTATGTACCAAGGTAGTGTTCTTTC AGGGCGCGTGATAGTTTTGGATGGCCTGCTTCTGTGGCAATCTCTAAGAT GGTTTGTTGTGGGCGTTTAAGGTCTCGACTCGCTCCAATCCTTCGAATAT GACGCCTATAACCTCCAACTCTCGGTTCAAAACTTTAAACTGCTCCGGAG ATGGCCGTCACGATCAGAGTCCAGGTCATGTGTGCAACGCCGCCGCTTAT TCTTCCCGGCCTCCCTCTGTTGAAGCCCAAGTCCTCTTGCTGCTGCAACT TGTATTTATTCCCCAATGTCTAAAAAGCGACCTCAAATGCAAATGCAGCC AGCGCTCTGTCGTTGACTCGGTTGCCACTAAGAAGCACAGTAACGCTTTG CGCCAGCTTCGCACAAAGCAGGCATAGAGAATATCGTCTGAAGCCACCGT CGCGCGCGATCGCTGTTCGGGGTTTGCGCTCGTGATGCGATCCTAGATGG ATATCGGGCGTGGTGGAAACCCGGTCGAGGATCGTCAACGATGACGTGGG CGACCGGTTGGAGGTCATCGTCGACAGTACCAGGGTCAAGGAATCAATCC TTGGCAAGATCAGCCCGCGGTTAGAGGGATGGCAAGTGCCGGTGGACCAG CTCTCGGAGAGGTGAATCTATATCTATGTATTAATAGTAATGTGATACTA TTAATACCATGTGTGTATTAATATAATAGTATTAATAGTAGTGGCATACT GATAAAATGCCGTCGGGTGGGTTTAAATTAAAAGTATGAACTTACCTAAG CCTTCCTATTAATAGTAAACTATTAATATCAGGTATGTATTAACAGTAAT GCGATACTTTTATTAAAAGAAGTGCTATCCTTATCTATTGAGGTCACACA GGAGGAAGGTCACACAGGAATTCCTTCTGCGGTGCGTTTGATTTTTATCA ATTCAGCCAGTCGACCGTGAAGTGAAGATGAATTAATCGTTCTCCACCCG TTGGGCATTTTTATTTTGGTTTTTGTTTTTTGAAAAATCCCGTTTGCCGG GATCGAAATGTCTACCGGGGTCGACCGGCTAACATATGTATTGAAGATAT TCGTCGGGTGGGTTTACGAGGAAATGTCGGATAAGATGTCGTCGGGTGGG TTTCGAGGAAAATATGAAGGCGTCCAAACCTTCCTATACCGCATACAGAC AGTATGATagCATCCACATCGTCCGGGGGAATGGTGCCTAAACGTTTATA CTAGTTGGAAACATTGGCTACCAGAGCAAAAACTCCATACAGCAATCTAT TACTATTTAATACTGTTAGTCGGGTTCCCCAGCGGTACGAGTAATCGCAT AGGGTTAACAGCAGTCAACACTAAACTACCTACCATAATAAATACTGTTG ACTGTTAACCTAGTGACCCTCTTTACAGCACTCCGAACTCACGATATCCC TGCTCATCCCGTTCAGAACGGCCGCACCATAACTGCCTTCTGTACCTTTC CCAGAATTTTCGATCGCATCCCACGCATCACTCTGGAAACCGTTTTTCTG GACCAAGACCTGCGTATATCTCGCTTGCCGGACCGGAATTTCCTCATCTA CATCAAGGACTACTATGAATAGACTATTAATAGACCACCTGGGTAGCTTT AGTATCACATCAAGATGCGAGAGGAGGTATGCTTTACTTTCGTCTATGAC AAATGCCAGATGGCGTCAAGTAGTCCTGTCAGTTCTTCAAATGTGCGATA GGTCGTGTAAGTAGGACCAGGTATGACACGTTTGCTCACCCGATTCATCG CAGGCGCGTGCAGGGACTTTTTTTCAATCACCAACGGGCGTTCGTTATCA TGGTGGCGGGAAACTCGCGGGGCAATCTGGTCGCCGTTGGCCTGACAGGA GAAGCAGAGCGGATGCGGTGGGAAATGGCAACCGCCCCCACCTAGGGTCG TGGAAGCTGATAGACATGATAGATTGATACCACCTCTGATGGAGCGTGTA TATTGATGCCACCTTCCTTGTACTCGCTACACGCTTTTTAGTTTTTTGTA CGGGGGACAAGGCGAAATATATCTAAAACTCCCAGGCTACCGATGTCGAA TACATACTTGGCTGTGTGTCTCAAGCTGGCCTGCAAGTTGGTCGGAATTT GGAAATAATCTCGCATGACCGCGCGTACCCGCTGGCGATCCGGGGGGGGG GGGGGGGTAACGCGCGCACACGCCTACGAGTGACAACTCTTTCAATCTAA ATGCGCTATTAGTAGCACCTTCAACCGCATGCTTGAATTTTCCGTCTCGA ATACTCCGAGGGTTCCTGATGGTGTAGAATTTCTAGGTGCATCTAGCGAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig105:700722..705171+

>mRNA_A-nodosum_M_contig105.70.1 ID=mRNA_A-nodosum_M_contig105.70.1|Name=mRNA_A-nodosum_M_contig105.70.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=855bp|location=Sequence derived from alignment at A-nodosum_M_contig105:700722..705171+ (Ascophyllum nodosum dioecious)
ATGCGATTCCTCTTCATCGTGGTCCTTCCACCTTTTGTGACTTGCTTCAT
GTGCAACGGCCCTGGGAGGGAGGGTGGACGTCAAGCTATCTTTAAGGGCC
GACAATACCCGAGTTATTCGAGTTCAGGATCGATCTCAACCGACAAGCGG
CAGGCTCGATGGATGACCTTTTCGAGCACGCCATCTAGCGTTGAAGAGGT
CACCATCATCAAGAATTCGCTGCTGCAGGTGGCGGCGATGACAGAGCGAG
GCCAGTTGGCAAACGATGAGCAACGAAATGATGTAGAACTTCTCGTGGGA
CGCCTAGAGGAGCTCAAGGAGGAGGATCAACCGTATAATGATGAGAACAT
GGTCGGAATTTGGACTCTGGTGTACTCGTCCTCTCAGGCGTTTCGGTCGA
GTCCTTTTTTCGCCACATTCCAGGCGTTGCTCGGCCGTGAGGGTGTCGCG
GAGAGGATTTTCACCTTCACGGACGAGTTCCCCAACGCGAAGATAGGACA
GGCGAGACAGATCGTTAGCGAGGACTGCACGGAGCTTCTATCGCGCGTGG
AGATGTCTCTCTGGCCTCACAGATGGATATCGGGCGTGGTGGAAACCCGG
TCGAGGATCGTCAACGATGACGTGGGCGACCGGTTGGAGGTCATCGTCGA
CAGTACCAGGGTCAAGGAATCAATCCTTGGCAAGATCAGCCCGCGGTTAG
AGGGATGGCAAGTGCCGGTGGACCAGCTCTCGGAGAGAATTTTCGATCGC
ATCCCACGCATCACTCTGGAAACCGTTTTTCTGGACCAAGACCTGCGTAT
ATCTCGCTTGCCGGACCGGAATTTCCTCATCTACATCAAGGACTACTATG
AATAG
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