|
|
Homology
BLAST of mRNA_A-nodosum_M_contig1049.19.2 vs. uniprot
Match: D8LB22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB22_ECTSI) HSP 1 Score: 330 bits (846), Expect = 3.390e-96 Identity = 289/740 (39.05%), Postives = 355/740 (47.97%), Query Frame = 2
Query: 14 MTDFGHWERFDADAAEAEVELQADARDKIRERISQERRVLKECENRAAMLKSEAAVRALKAKRGSRRRGANRQARPDFSTANPGEPRTDADTRALSEAPIDSAAVDSSGEVFRAQTRADEANAIVKGLRRGLGLRDEVLASAEAGNLYEVVTKARECLSELGALQILLRQ--ATPAEFDGGPPPFTATDGSHSVEGERSRGCSDAHGHGRLHSXXXXXXXXXXXXXXXXXXXXDREKAVCCSDRCPSEAGEDALVG------------------AVKVLRSATVAVRITEGNCLLRAGRAAQATEALRDLLLEHPTSVQAWTTRGRAFLSMQNHLLAGLHFDRALELDLDCADAADLKKSLRFRPETPEDGGPSVEVGESRHFLSKCFPNREA-------HG-------RTDPGG---------MAGDCGERSGVPQQ--------------------------------------------------------EAFRRSLAAACEEYRSGMVLHREAFFASSRDKFYRVLSLINEAEDAARGPAHTV----EGGEEPV-------AGLGSRSFQVPGSVE----GEHDCAPATWCASRDSHLN----LDEIRVGCHLNIAAAALLRKTDYESVVHHCTRALAILRGNSSRSSRTNLRRALVRRAQAHGELGRFRLAIDDLEAAEVSFLGEAREVSPQEGNMGPVNTTLDGELVDIRKRLERARWTKINMGNGKDELPGV 1879
MTDF W+RFDADAAE E+E +A + R I++E+ VLK C++RAA LKSEA V ALKAKRGSRRR A +T N D +L AP + A+ A+T ADEA+AI+KGLRRGL LRDE++A AEAGN + ARECL EL A Q LL + A + D G +AT G+ G C GH XXXXXXXX C SD G+ A G A++VLR A A R+ E CLLR GR AQ+TE LR+LL E SV AW RG +FL+M LLAGLHFDRALELD C AA K++LR + ES + A HG R GG +AGD G + P + E RR +AAACE+YR+G+VLH+E F +SSR +F RVL +++A A G V +GGE AG G + G E G A + R + + +RVGCHLNIAA+ LLRKTD ES HCTRAL + GNS RALVRRAQAH ELG FRLA++DLEAAE S L R+ + G + L GEL ++ KRLE ARWTK+++GNG DELP V
Sbjct: 1 MTDFEKWDRFDADAAEKEIERKAVVEEAKRVIIAEEQLVLKYCQDRAARLKSEAVVSALKAKRGSRRRSAT----TTEATGNT------EDGVSLDGAPKNVGAL-------VARTSADEAHAILKGLRRGLELRDEIVADAEAGNFHRGTRTARECLVELSAAQKLLGKVVAVVSPGDTGDNHGSATQGAAGATGGT---CCGHGGHDXXXXXXXXXXXXSVDTGHVGQG--------CASDSGGGVRGKSAATGVPAQADGRENDEPEEIPKALEVLRRAKAACRVAEAACLLRGGRVAQSTEVLRELLFEDSKSVAAWVARGESFLAMNAPLLAGLHFDRALELDKGCVAAATHKQNLRHVSSKGTSAASAACADESHQTPAAAGDTDAAPQKMTIHHGSPTNLSSRVGCGGNVGDQGSLAVAGDVGVETPAPAEDGAIFTTEATEDPAVAAETPDEEGNPGVAPTAAAXXXXXXDRAAARGVNDDGGSVTEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLEALDKATAAGLGMHAAVARQDKGGESAAGQSPSEKAGCGDGCEGLDGKSEEASSGSQVRATSKCGGERGKGGHAVTVVRNMRVGCHLNIAASFLLRKTDLESAAIHCTRALVVEPGNS---------RALVRRAQAHQELGYFRLAVEDLEAAEASVLASVRDGHRR----GEGSEALAGELAEVVKRLEHARWTKVHVGNGNDELPRV 699
BLAST of mRNA_A-nodosum_M_contig1049.19.2 vs. uniprot
Match: A0A835YWL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWL0_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.010e-17 Identity = 99/311 (31.83%), Postives = 121/311 (38.91%), Query Frame = 2
Query: 821 EGNCLLRAGRAAQATEALRDLLLEHPTSVQAWTTRGRAFLSMQNHLLAGLHFDRALELDLDCA------DAADLKKSLRFRPETPEDGGPSVEVGESRHFLSKCFPNREAHGRTDPGGMAGDCGERSGVPQQEAFRRSLAAACEEYRSGMVLHREAFFASSRDKFYRVLSLINEAEDAARGPAHTVEGGEEPVAGLGSRSFQVPGSVEGEHDCAPATWCASRDSHLNLDEIRVGCHLNIAAAALLRKTDYESVVHHCTRALAILRGNSSRSSRTNLRRALVRRAQAHGELGRFRLAIDDLEAAEVSFLGEA 1735
+G L+ G A A EALRD+LL P AWT R +AF LLA LH +RA+ LD D A DAAD L +SRH S E YR G +LH+E FFA++ +F L+L+ + A E GE G S V E+ VGCHLNIAA ALLR+ D+ V HCT+ALA+ R ALVRRA A EL + A+DDL AE L A
Sbjct: 220 KGAAQLQLGHLAAAAEALRDVLLLEPARAAAWTARAQAFRLAGVPLLALLHAERAVRLDPDSAAAVLEKDAADASWRL---------------ASDSRHQRS----------------------------------------AEAYRMGCMLHQEQFFAAAAARFREALALLAPLLQRSVAVAAQRESGE----GEADESGDVAXXXX-----XXXXXXXXXXXXXXXQELAVGCHLNIAAGALLRQRDWSVAVEHCTQALAL---------RPRCVEALVRRAAAWEELCAYARALDDLSTAEAVLLQPA 457
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 164328.Phyra74096 |
| Model size | 3195 |
| Max annot lvl | 4776|Peronosporales |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Evalue | 2.17e-08 |
| EggNOG OGs | 2A1I5@1|root,2RY0U@2759|Eukaryota,3QD65@4776|Peronosporales |
| Cds size | 1884 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866424.2248268-UTR-A-nodosum_M_contig1049:193966..195264 | 1680866424.2248268-UTR-A-nodosum_M_contig1049:193966..195264 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1049 193967..195264 - |
| 1680866424.3138852-UTR-A-nodosum_M_contig1049:208229..208242 | 1680866424.3138852-UTR-A-nodosum_M_contig1049:208229..208242 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig1049 208230..208242 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866424.2352717-CDS-A-nodosum_M_contig1049:195264..195321 | 1680866424.2352717-CDS-A-nodosum_M_contig1049:195264..195321 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1049 195265..195321 - |
| 1680866424.2442536-CDS-A-nodosum_M_contig1049:195952..196214 | 1680866424.2442536-CDS-A-nodosum_M_contig1049:195952..196214 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1049 195953..196214 - |
| 1680866424.2602627-CDS-A-nodosum_M_contig1049:196683..197369 | 1680866424.2602627-CDS-A-nodosum_M_contig1049:196683..197369 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1049 196684..197369 - |
| 1680866424.2702832-CDS-A-nodosum_M_contig1049:197734..198165 | 1680866424.2702832-CDS-A-nodosum_M_contig1049:197734..198165 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1049 197735..198165 - |
| 1680866424.2829783-CDS-A-nodosum_M_contig1049:198468..198757 | 1680866424.2829783-CDS-A-nodosum_M_contig1049:198468..198757 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1049 198469..198757 - |
| 1680866424.295284-CDS-A-nodosum_M_contig1049:199036..199129 | 1680866424.295284-CDS-A-nodosum_M_contig1049:199036..199129 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1049 199037..199129 - |
| 1680866424.3056169-CDS-A-nodosum_M_contig1049:208163..208229 | 1680866424.3056169-CDS-A-nodosum_M_contig1049:208163..208229 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig1049 208164..208229 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1049.19.2 >prot_A-nodosum_M_contig1049.19.2 ID=prot_A-nodosum_M_contig1049.19.2|Name=mRNA_A-nodosum_M_contig1049.19.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=628bp
MTDFGHWERFDADAAEAEVELQADARDKIRERISQERRVLKECENRAAML
KSEAAVRALKAKRGSRRRGANRQARPDFSTANPGEPRTDADTRALSEAPI
DSAAVDSSGEVFRAQTRADEANAIVKGLRRGLGLRDEVLASAEAGNLYEV
VTKARECLSELGALQILLRQATPAEFDGGPPPFTATDGSHSVEGERSRGC
SDAHGHGRLHSDARSHARAHPQLERNVNAHGDREKAVCCSDRCPSEAGED
ALVGAVKVLRSATVAVRITEGNCLLRAGRAAQATEALRDLLLEHPTSVQA
WTTRGRAFLSMQNHLLAGLHFDRALELDLDCADAADLKKSLRFRPETPED
GGPSVEVGESRHFLSKCFPNREAHGRTDPGGMAGDCGERSGVPQQEAFRR
SLAAACEEYRSGMVLHREAFFASSRDKFYRVLSLINEAEDAARGPAHTVE
GGEEPVAGLGSRSFQVPGSVEGEHDCAPATWCASRDSHLNLDEIRVGCHL
NIAAAALLRKTDYESVVHHCTRALAILRGNSSRSSRTNLRRALVRRAQAH
GELGRFRLAIDDLEAAEVSFLGEAREVSPQEGNMGPVNTTLDGELVDIRK
RLERARWTKINMGNGKDELPGVAGPNS* back to topmRNA from alignment at A-nodosum_M_contig1049:193967..208242- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig1049.19.2 ID=mRNA_A-nodosum_M_contig1049.19.2|Name=mRNA_A-nodosum_M_contig1049.19.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=14276bp|location=Sequence derived from alignment at A-nodosum_M_contig1049:193967..208242- (Ascophyllum nodosum dioecious)
TCAAAGGTAGAAAATGACGGATTTTGGCCATTGGGAACGCTTCGACGCAG
ATGCAGCGGAGGCTGAGGTGGAGCTTCAGGTGGGAGGTTTCAGAAGCTAC
GACTGGCGATACGTACCAGATGTTTAACCAGATGTTGTTGCAACTCATGT
GCGGGCGATGGACCCAACCGTGCTAGGTTACCAATCCAACCTACTGCAGC
GTTGCCATTTTGCCTGTGGTTACTAAGGATCTGGAATTCAGCACTTGTTA
CCAATGGTCGAATTTTACTTGTGCAAGCATTCTTTTCGGTACGAAAACAA
CATTGTAATAGATTAGATCTCGCGAATCCACACTATATTCAAATGTACAT
TTGAAACGGTTTTCTCTGAGGTTTGCAATTAACAATTAACAAGAAACGGA
GAATCACGCAGTGTTGCCGGACAACGCCTATTTATCACTTTGAAAACGCT
TACATTTTCGCGGGCCCACGCTACCCGTGGTAGCTGTGGCCACCTCGGAA
GTGGGCCCCGCTGTACTGCTGTTTGTTGAAAAGGTGTGCCAAGTCTTGCG
ATTCCAAACCAATTCTGTCCCATGATATCAAGAAAAGTATCCACGGCCAA
AGTACCTCGATTTTTAAAATGCGGCGGGATTATATAGGGGGGCCCCGTTA
AACCACGGGATGAGACACCCCAGGGTACCTACTTCAGCAACCGAGATTTT
CTCATCACGGGATATGTTCAACGCAATTCTGCAGCAGATTGCTTTGCCAT
GAATGGGCGCGTGTGTATCCCAAAGCGTCGGATTGATGGCTGCCTTGTTG
AAGAATATTTGACATCATCACATTGCTACTTACCCTCCATGTGTTACTGT
AAACTACTTGAAAATAGAGGTGGCATCATGACATTACTACATGTCCACGA
TCCGCCTGTTTTGCCCGAGTTGAACTATATTAGTCATACTCTTCTGTCCA
GCAATCAGTAGTGAAGTCCCACATCCCCCAGAGTCCCTACCGTATGACTT
GTGACTCATGCACACCTCGCTGATTTCAAATATTTTTATTTAAACAGTGA
GAGTATGTATTATATTCAGTATTTATACCAGTACAGCGATCGACTTAAGT
TCGAGGTTACAATAACAAGTACCAGTGCGACCTCGTTTCGTATACACAAC
CTCAATCGCCGAGAACATCCCGTCACCCACATACATTGCGCGGACAATCC
GTCCTACACTCAGAACACTCTACAGCGTACTATCTCCAGTGTTGCTATCG
TTCGATGCTGGAGGTGTGCGTGACTACCCGGTGGGCGTACAGATAGATCC
ATCTGGTTCGGGGTGGTTCTGCGGTGCCAACCTCCTAAGTTGTCATGGCG
GCGACGTCAATACGACGCTTTCCGCAGCCTAGTATTTTGGTTTAATGTCA
TATTCCCCACAACATTAACCTTACTAGGGAATCTATGCTATTCCCGTTAC
GTGGTGGTCCGTCTTCTTCACCCTGTGAACCACAAGCTACCTCTTGCTCC
ACGTCCAGGGGTGCCTCGAGGGTAATGACGAAATGTAATGGAATAAAAAA
AGAAACAGTCCTACATATTATTGCAGCCCGGCACCACTGCACGATGTCAC
CCCCCACATACAAGTACGACGAAAAAATACATACCGGTATGGCATTATGT
CTCCCTAGGGCCGTTATTTTATCCCGCTTGTAAGAATGTGAAAAGATGTC
CGATCTTCCAGGCAAACATCTAATGTCGGGAAAATGTTATAACAAAAAGT
TACCTGGTACAGCATGCCATTTTTCAACTCCACGTTCAAACTTCCCAGGT
ATATCAATAGTATACAGGTATTTTCGTGCCTAACACCCAGCCACCATCCT
CTCTTGCTATAGTAGCTAACCATTCATTTTCGGGATGGCTTCAACTTGTG
ATAAAGAGAGCAGAGTCAAGGCCGAGCTATAGTAATGGATTATCTGGCAG
TTCGCTTTAGTAGTAGTGCGGATTTCGTCAGCTCGAATCTCGACAGATTT
ATTTCATTCATTCCGGTTTCCGTAGCGGAAAACGTAAGAATGAGAGGAAG
CAAAGTTCAGTCATTGGTTGACGAGGTGCAAGAGTGCTGAACTTGCATCG
CGATAAAAAGTCGTAGGAGAGAACCGGGGAGAGATGAGAAGATCCTTGGT
GACAATCGACATGGACAGGATGGCAACACTGCAATGTATGGTCACCACGT
TTAGCAGAGTATGGATAACCAGGTAAGCTTGCCAATCCTGCTCGTGGTCA
GCTGAACAGGGAAAACGAATATTCCCCTGTCCCCGAACGCGCCTGAGAAT
TTAGTCTCGTGGGACGGGTTCAGCCTTCCCGTCCCGCGTCAGCCTGCTCA
ATTCTCCATACTCAGGCTGAATCTGGTGCTTACTCACGGGATTCCTCCCG
ATTTCCGCGCGGCGTCCATTTGTTTAAACCGCCATAAGCGATCGGGTCAG
TCCAGATCTAATCGAGTCACGCAATCGCGTACCGATGGCGTTCACTGCCG
AGAGGTCGCCGGCACAGGGCCAGTAGTCCTCAAGGTAGTTCCAGTAACGG
CTGCTGCCATTTTGCAGGTCACCATGGACCAATTAATGTGCGCCTCTCTT
TTCCCACACCCACTATTGGTATGAAGTAGGCATGTTGAAAGCAAATGGCG
TATAGGTGAGATTGGTAACCTGGCGCGTTGAGGCCCATCGGCCGTAATAG
TGTGTAAGGTACAAACAACAACACAATAGTAAACGGCAGGATAGGAGCCT
TATCAGGAGTTGACTCGTCCTCGACAATCGAGTGCTTACTCGTGTACTGT
ACCTGTTGATGCCTGTTTTAAAGCCCAAACTTGAAGTCTCACGACTGCAC
CATCGTACACTCCGTACCGCAGTTAAGAGACAGCCAAATGTAGTACATCG
AACAGTAGTACTACTACAAGAACTCATTTTGTACTTGTACGCTCGTGCAT
ACGAGGAACGTCGTGAGTAATCCTATCAGCTTGTTAAACGTGGGCCTGTC
ATGCGATATTTCCTCTCGAAGGCCAGTAACGGTTTCGGCGTGGTCGTGGA
GGTACTTACTTCTAGCCCGGCGGTAGTACCGCGAGGGATGAGCATTAGCT
GCCGCAGCCAAAGCCGGTCGCAGCCATCATGGCGGCGACAACCAACATCA
CATCGCCACGACCCACTCTTCGTCATCTTCGTCGTAACTACAGTGTAATA
TTCCTGATACTGTATAATAATCCTCCGTACAAGTTAAACCACGATAAACG
ATCTTTACCCTTCCCTTTCCAGTTAGGATTAGCCGGTATTAGCCAGTATT
AGCCAGTAATTGTTCATGTACTATTAATACTACTGTACAGCCTCCGGTAC
TTTCTGTATCACAGATGTCATCATGTCCACTTCATACCAATATTAGTATA
GTGGGTGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTTA
TGTGCAATTTAATACATACATGCATACATACAAACTGTACTGTATCATGC
GTCATTACTTCGCATCACCGAGGTAAACCCTGTACCCCATACGAAACACG
TGCAGTATCGAATGTTTATGGCCCGAAGCGTGTATGTTTCTTTGCATTCC
TATCAAGTTTGGCGTTAGTATGTGGATGGCGGTAAGTAAAAGTGTACAGG
TACTGCATAACGAGATGGGGTTTTCTCCGACATTGTACTGATTGTTGTTG
ACCCTATGCGACGCAACCCGACTGGACCCCATGTAGAGTTTTGTACCAAC
AGCCGATGATGATGTCCCCAACCAAACGTTTCGACACGATTCCTCTGGAC
AGTGTGGATGCATTTAGATCTTTTCAATAAACTCGTAGCCACATTCATCC
CAGTCGTGTACCGACTGATGTTGAGCCGACACGTCCTGACTGGGTGTCTG
ACTGAGCGGGTCATGGTGTCGGCTTTGTCGACTACGCAGACCGTGTGTGC
AGGAGCTGGAGGGCACGGACAGGATTACTTTCGACTTAAGCTAGTAATAG
TTGGCCGCAAGCCACCGTGCACAACTGTACCAAGTCATCCAGAGTAGTGA
CCCCAACGCACACAGCTGGCACGAGGTACACGGCGCGTCATGACGTGGTG
TGCACTCGCTCGGAAGGTGTGATGTTAATAGTTGATATCTAATAAACTTT
TCAAGTGTAATATTTCCAAAGTTTTAAATGCGAGACACCGAGTTAAGACC
ACGTCGGGTTTTTAATAAAGCCACTCTGCTGAACGCCCAGTCAGCGCTGA
CTTGAGCGATTGGCTCAGTGGTCACACCAGTTCCCTGCTATCCACATAAG
GCCTTAAACTGCCATCAATACCTCATTGGCAAAAGTGAACAGCAGTTCTC
GACGCCTCGAAGCGATGTTGCAGTACCGGTGCTCCGTTAGTTAATAGCCC
ACACACGTGGGTGTGGGAAAGAGAGGCGCATGTTAATTGGTCCATGGTGA
CCTGCCAAGGCAGCACCCACTTGGAACTACCTTGAGGTTTACTGGCCCTG
TACCGGCGGACTCTCAGCAGTGAACGCCATCGGTACGCAATTGCGTGACC
CGATAAACTCGGGGCTGACCCGCTGGCGAATGGCGGTTTAAATGAATAAA
TGGACGCCGCCGCGGAACTCAGGAGGAATCCCGTGAGTAAGCACCAGATT
CAGCCTGAGTATGAAGATGAACAGGCTGACGCGGGACGGGACTGCCGAAC
CCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGGAGACAGGGAACATTC
ATTTTCCCTGTTCAGCTGACCTCGAGCAGGATTGGGAACCTTATCCGGTT
AATCCATACTCTTGCTATATGTGACCATACACGTGTTCCAGTGTACTGTT
GTGATGGAACAATACACAGGCCCCAGACCGATTGATGTGCCCTGTGGCGT
CAAATGATTCGCGAAGACAAAGATAGGCCCCTTGTTAGGATTCGTCTTAC
GGCATTTCCATTTTCTAATTTCCGTCCGGAAATATTCAATATTTCAAAGT
TCGCAATAAGTTGCATTACAGGTCTATCTTGTACGTACTGGGCTCGTTTG
GGTGTTTCCAAGCTATTACACCTAAAACAGCAACGTTCGCTCGCGTTTAC
TACAGTTCGTGGCCCCACGATAAACGATAACAAGCTGAGCTAGACCTCAT
ATAGGGGCATGTGTATGTGCGTGCTCTCAACATTAACCGATCGGACCCCG
ACTTTACCCAGTAATGTACGCGGTTGCCAATCCGGTGCGTGGTCTGCTGG
ACAGGAAAATATCAGAAAGACATCTCCAAAGCTCCAACGAGAGCATAGCG
TAAGATAGGGCGCATAGAGGCGCAGGGAGCCCTTAAAAAAAAACAGATGC
GTGGCGCATACACGCACGCGCGCAACACAAGAGGCGTACTCGCTAAGGAT
GGCTGGGCAGAATGCCAGAGCGTCAGACGCGCACGCCCCTCCCCCGGGTT
TCAACTATTTAATACCTCGTATTTGCACACAAAGGCATAACATCTACGAC
ACAGTTCTCCCAGGGCTCTCAGGCTTCTCCATCGGCGCAGCCGACTCTGC
CTCGGGAGCCCTTGAGCCGGTCCAATCAACGCGGCCCCGAAACGTCTCGA
GATTTATACGGTCACCCCAGGTGCGACGTCAGCCTTGTCCGCCGCTTCCG
CCTCTTTCTTTCTTTGACGGTTTTCGGACCCCTTTTTATATTCTCTCACC
CAGACGGCCATGAACCTGGAACCCCCTTCACATTGTGTGGTACCAAACAC
CAGAGTCTAGTGCGGCGGTACTCCAGTCCCCCGTGACGACAAAGAGATGA
CGATCCTCTGCCACGCAGTACGTACATTCAATCTATTTCCCCTCTGGCCC
ATGATATCCCGCGTTCTACAGCTCTCCTGACCTTACCTTCTTAAGTAACC
TGTGGTCGCCCATGCGAAGCAGCGCCCCCGCCCACAATTACCTCTTCGTG
CGCACGGTTGCTTTGATACTCTCATATCCAGTTCGATGGAGGGCGCTTTT
GTACGAGGGGATGTGGTTGTTCGGAAAGAAAAAGAGTCGCTCACCATTAT
CGCTGAGCGTTTCTCGATCGTAGGCACCGAGAACTTTACACTCTTCACTC
TCGAGCCCTGCCGCTCCCCTCCGCCCCGTTCGCGCGTCGGCGTCCATCAG
CACAAATGGGTGTTCGTGCTCGGGCTCCCCCTTCACGACCCTGTCTAGGG
CTGTCCAGAAAGCGTCCCTTTTCCCAACAGTTTGAGTGTATGTTGAGGCA
TATGCAACAACCAACTCCACAGCCCGAGCTCGACCACACAATTTAAGCGT
CACCGTCAGCAGCCGGTTACTGATGAACTCCGGCGATCGTACTCTGGCAC
GATAGATACTCTTGCGAACATCCAATCCAACTCCACATTGGCTCTTATTT
CCTACGTCGCCTACCGACTCACCGCTGCAATAAACTACATACCTCTCTTG
AAGAAGAGCAGACTGACCGCTACGCCCAGCTTCCTGCAGACCGATGATGC
CACAGCTATCTCGTGATACACGCCGAGGACCCCAGCTGCTCGTCCTACAC
CGTACTTGCCATCCACAGCCATCGCCCCCACATTGTAGGTAGCGCTGATG
ATAAGCTCTCCCTCCTGCGAGCTCGGTCGCGGTCGCTGCCCGCTTGTTGT
GCTGCGCGCCGTCTCGCTCTGCCTCTGCACCTCCGCTCCCTGGCTAGAAC
CTTCCTTCGTTTTGTTGTTTTTCTTTACAGATATCCTACACTTGTTGGTC
CCGCGAGAAAGGTTCGACTCCCCAACCCCGCGTCGGCTCGCCCAATCTTA
CACACCCGAGTTTCATCTGGTGTTAACTAACGGGCGCCTCTCCTTCCTCC
TTCCTCCCGCTTTCCGCGATAGACGATAGAGACGGTGCTGCCGCAGCTTG
TTTGCCTTTGCTGTTGAGACGAATGGTTGTTTAGCTGAAATTGTACCGTA
AACGCCATCGGGTGCGCTGCTAGTTGATCAGGTCACACGAGCTGCGTCCC
GTTAGCGCCGGTAATTCGTGGCGGTCCCTCACCCTCGCTTCACCTCCTCA
GGTTTGATCCCACCACTGCCGGTATGCAGCCGGGGGAGGTATACAGGCTC
GGTGTCCGACACGTTCCATCTATCTGAGAGGGACTCTATATCAAGTTGCA
GTCCATGTCATGGACTGTAGCTGGTTATCTTGTTGATCTCCCGAAGGAGG
ACCTCAAGAAACTGCGAACGGGAGACTTTCGGGGTTGTACCGCTCGACCT
CCAACCACACAGCGACAGAGAACTTGAGCTGCAGGCTTACGATGACACCA
ATTTTTTTAGTGAGATATGACGTAGAGAGAGGTGTGAGGCAACCTAGCAG
GGAGTCATCGGGCAGCGGGCATCGTGTGACCCCTTGCTGTTGATCCCTGT
GAGATGGAGCACCACAAGCGAGGTGTACGAACCCAAAGGGCTCGTACCTT
CCATTTTTCCCACTTCGGAAATGGGCAACAATGAAAAAGGCTTGGGACGT
TTAATTCCAAAGTTGGAAGGGGTTTCCACAGGCTTGTTTTTGGAAAAAGT
GGAAATAATGTAAACGACCGTTACACGCAAATATAACAACCTACCGCGCA
GTACCCAACCGGAGCATGGTGGTGCTTGCATCAGCGATACGAATGCTGTG
CCGTTCTAGCGGGAGATGTCGTGGGATGAGGGTTCGACGATTGGTGAAAG
ACAATGCTACATCCAACAAAGGTCGTCCATTGGTTTATGATGAAACCTAA
AACAGAAGCACCCGTTACTGGAACTACCTTGAGGACTACTGGCACTGTGT
CAGTGGGCTCTCGGCAGTGAACGCCATAGGTGAGCAATTGTGTGACCCGA
TATACTCGGGACTGATCCGATGGCGGATGAACGTACAATTAAATGGACGC
CGCCGCGTAAAGTGGGAGGAATCCCGTGACTAAGTACCAGGTTTCGCCTG
AGTGCGGAGAATGAGCAGGATGACGCGGGACGGGACGGCCGAATCTGTCT
GGCGAGACCAAATTCTCAGGCGCGAACGAGCACAGGGGAAAAATATTTTT
TCCTGTTCAGCTGACCACGGGCAAGGTTGGCAACCTTGCCCGGTTAATCA
ATACTCCGCTGAAAGGGCTGACCATACATACACATCCCGAGACTTTGCGG
TTCCGAATGGGCGATTAGTGCAAGCGTATAGTGTAACGGTGGGTTTCTCC
CGGATCTTATACCGTTGACCCCATGCTACTACCATTGAGGAAAACCAACT
AAATCCCACGTCGAGTTTTGTTCCAACAGCCAATGTTCTCAATTAAATGT
TTCGACCCTATTCTCCCGGATAGTGTGTGGAAGCTCCGAAGGTTGAGATG
CCCTCATATTTTTCCATACATAAAACAAACCTTTCTCGGCGCCGTGCCCA
TTCTTGGAAATAATATCCTGCGCCAGAAAGTTTGATTTTCTTTTGCCCTC
GTTGATCGTGTACGAAATAGTGACCAATACTCGCCAAAATCGAACATGGA
AGTAAAATGACCCGATCCCGGAAATATGTGTCACCGGTACCATGATGCGC
GATTGCGTCGCTATTAACATCGGTTGTGTGCATTCATCGGTTGTGGCATG
TGTAGTATAGCTCAAATATTGTATTGTGGCTGGTTCCTCCAGTACGATAC
ACGATACAAGTACAAAATGTGAGAACTTGAACCCCCGCTTCCTTGCTGGC
AAACAAGCCAAAATGTCGATTGTTTGAGGGAGGGGGGGTTGCTCGTTTCT
CAAGAACAAAATGTGAGGCATATAGACCCCCGCTTCCCTTTCGGTAAATA
AAGCCTTCGACGTTGTTACCGCCCCCCCCCCCCCCCCGCCTTCTTCTCCA
TTTTTATACAGCTCTCCACCACGACACGGATGTCTGAATGTACAAGGGCA
CCGTGCCAGAAAATACCCACACGAAAATTGAGTCTTTTGTACAACCACGA
GTGCTGTAGTAACTTCGTGTCGGTAAGCAGAGTTGCAATGATCGCATTGT
TCGGGTAATATATCCGGGGCTACTGTGTCGCGTGCCTACAGCGTTACACC
CTAAGCAGCGGTCCCATGAGACGCTTTCACTGCTCAGCTATGCTCTTCCG
CAAACGGCGGCAGGCAGATGCTCGCGACAAAATTCGGGAAAGGATCTCGC
AGGAGCGAAGAGTCTTGAAGGAATGCGAGAATCGTGCGGCCATGTTGAAG
TCGGAGGTGCGGGATACACTTGAAACCTCACAAGCTCAGCGGTCTTCTCT
GGTCTATCCAGCGAGACGCGGTTCGTCCGCGAAAGAGAACCACGGCACCT
TCAGTGCTTCGACCCTTATTATACGCTACCACGTGTACCTACGTGGGGAG
AACACCTCCCTCTTTAGTTCCTGCCATCCACCCTCGATGCTCATGTAGGT
CGATGCAACACTCCCAGCGTGTACCTCTCCACCGCCTTCTCTCATCAGCC
CTCAATCGATCTTGGGTAACTCTCTTGTTATCCAGGCGGCGGTTCGGGCA
TTGAAGGCCAAGCGAGGCTCGCGACGACGAGGCGCCAACCGCCAGGCTCG
CCCGGATTTTTCGACTGCAAACCCCGGCGAGCCGCGTACTGACGCTGACA
CCAGGGCCCTATCCGAAGCACCGATCGACTCCGCTGCCGTAGACTCGAGC
GGGGAGGTTTTTCGCGCTCAAACGAGGGCTGACGAAGCGAACGCAATCGT
GAAAGGGCTGCGGAGAGGACTGGGGCTTCGGGATGAGGTCCTCGCGAGCG
CCGAGGCAGGAAACCTTTACGAGGGTGAGGTGTGACGAATGCTTTTACAT
CCTGGGAAAGATGCGGTATATTGGCGATCAAAGTTTGATATATATTTTTT
AAAGGCAACGCATTTCTGCAAGCCGGCGAGGGGCGCAGGGGATATGTATT
CGCGGCGGGTGTACCGGTTCTTCTTCTCCCGCTTCCCGCTCCATTTTGAG
CGAAAAGTTTCAATCAGCCAAAAGCAGTCATCTCGATCGCTTCAAGATAC
TCACTATTTTCTCGTCGAGAAAGCTATCACTTCTGCGTCGGTGACCCATC
CGCCCCTCCCCGCCACCATGCAAGCAGTGGTAACCAAGGCTCGAGAGTGC
CTGTCGGAGCTCGGAGCCTTGCAGATCCTTCTCCGTCAGGCGACACCGGC
TGAGTTTGACGGCGGACCCCCGCCATTCACCGCAACAGACGGCAGCCACA
GCGTGGAGGGAGAGCGAAGCCGCGGGTGCAGCGACGCTCACGGCCACGGT
CGCTTGCACTCGGACGCACGGTCTCACGCCCGTGCGCACCCACAGCTAGA
GCGTAACGTCAATGCCCATGGCGACAGAGAGAAGGCGGTGTGCTGTAGCG
ACCGATGCCCTTCGGAGGCTGGAGAGGATGCTCTTGTGGGCGCGGTAAAA
GTGTTAAGGAGTGCAACGGTGGCGGTCAGGATAACCGAGGGGAATTGCCT
GCTTCGGGCCGGGCGGGCGGCGCAAGCCACGGAGGCGTTGCGGGATCTGC
TTCTCGAGGTTTGCTGAAGGGGGGGGGTAAGGAGGGAAGAAGCAATGCAA
CCCTGTAAGGCCTCGCTTGGCGACGGGGTGAATCACCTCATAACAAGGAA
CTACGAGCCGTCAAAACACGGCTGAGCGGATCGTTGTCGTGTGTACGATT
TTGGAGTGTAGCTTAGGGATTGCCCCGTTTATGCGGGGCGGTTCCAACCA
AGTTTTCGATTGTATTTTGTCGAGCTCAACGTTCCCCGCAACCAATTGCA
CACACACACATATATATATATGGCATTTGATTGTGACATACGAGACCCCA
AGTATATATCTACCCAATCCCCTCGCCCCTCTCCACGCCCATCCCTGTAT
ACACGCATCGCACGGTGGTGTAGCACCCGACGAGCGTTCAAGCGTGGACA
ACCCGCGGGAGAGCTTTCCTGTCGATGCAAAACCACCTGCTCGCCGGACT
ACACTTCGACCGTGCGCTTGAGCTCGATCTGGACTGCGCTGACGCGGCGG
ACCTCAAGAAAAGCCTCCGTTTCAGGCCCGAAACCCCCGAAGACGGGGGA
CCAAGTGTGGAAGTCGGTGAATCCCGTCACTTTTTGTCGAAATGCTTCCC
AAATCGTGAAGCGCACGGTAGGACAGATCCCGGAGGAATGGCGGGAGATT
GTGGAGAAAGATCGGGAGTACCGCAGCAAGAGGCGTTTCGGCGTTCTCTT
GCCGCCGCCTGTGAGGAGTACCGCTCGGGCATGGTTCTCCACAGAGAGGC
TTTCTTTGCTTCATCGCGGGACAAGTTTTATCGGGTTCTGTCGCTCATCA
ATGAAGCCGAAGATGCTGCAAGAGGGCCTGCGCATACCGTAGAGGGAGGT
GAGGAACCTGTCGCAGGCCTAGGTTCAAGGAGCTTCCAGGTTCCTGGGTC
GGTGGAAGGCGAGCACGACTGTGCGCCCGCGACGTGGTGTGCCTCGAGAG
ATAGCCACTTAAATCTAGATGAGATTCGTGTCGGGTGTCATCTCAATATC
GCGGCGGCGGCGTTGCTGAGGAAGACGGACTATGAGTCCGTGGTGCATCA
TTGTACGAGGCGAGTAAAATGTACTTCGTATTGTGTTGGCCTCGGACTTA
GGGAAAACTTAAATTGCGCTTGGGTGTAGATCTATTCATGTTATAGCGTG
GAGCGGGACTGTTTGAGGTTTACATTTTGCTTTGCTTTTTTTGGCATCCT
GAAGATCTTATGAAATGCGAGCCGGAGGGGAAGCCTTTTGATACGTTACG
TTGCCGTACCTCCGGTCAAATAGGGATCCTGCGCGATCAAACAAAATAAC
GGACTTGGGAATGATAACAGAGGGGATTCCCCGGCGGAAGCCTTTTGACG
CGAAAGAGTTGTTCAGCCCTGTTTCAGCCCCGCTAAGAGGCTTTCCTCCT
TTTTCGCTCCTGCGTCCCCCGCGGCAAGGCTTTGGTCTTTCAACAACCGC
TGTGTCTTCCGTTCTTCCCCTCGCCACATACGTTCGGGCCTTGCTTGTTG
ATTACAACCTTCTCCCTCCTTTGCCAAGAGCCTTGGCGATTCTTCGGGGT
AACAGTAGCAGGAGCAGTCGCACGAACTTGCGTCGCGCACTTGTGCGTCG
CGCGCAAGCTCATGGAGAGCTGGGCCGATTCCGACTCGCCATCGACGATT
TGGAAGCAGCAGAGGTGTCGTTCCTGGGGGAGGCTCGAGAGGTTTCTCCT
CAAGAAGGGAACATGGGGCCCGTAAATACTACTCTGGATGGGGAGTTGGT
GGATATCAGGAAGCGCTTGGAGCGTGCGCGGTGGACGAAGGTCAGTCGTT
GTCTGTCGAGCGTTTGCAAATTAACAAATCACCCCTTATTTCTAAGAATT
GGTACAGTCTTCGTAAGTTAAGCGACGCTGATAGTTTGTTATTTGTTTCT
TTGTTCGGATGGGCGCGGAGAAGCTCTTCTAAGTCTTAAGCCGGCTGCAA
CACTGCTTGGGCCATGATGCGATCTTCGATGGGGCCCCTTGTGGTCACAC
ACCCCAGGTTCTATTTGACGCGGTCAATTTTACACTCGAGTATTCTTTCG
TCAGCTGTCACCAACCAGAAGTCGTTTGGCGTAAGGAAAAGCTCCCGCCG
AACGTGGGTTTTCCGCTCTGAACGCACCAAAGCTTTAGTAGTATCACTAG
TTTGTGTAGACTGTTAAAGTATACTATTTTCACTTCGAAACAGAGCGTCA
CGGTACTATTGTGCCCGTCGGTTATCGTCCTCAACGAGCCTCTCCGACCA
TGACGCCCCCCGCGCGCGCGCGGCTGTGTAATGGTTGACAGCAAACGCGG
CACGCTACACTTGCGGTGCTGTACGATTCAAAACAGTACGCTAAAACCAC
AATACTCGAAACGTGTGCCATTTCCTACAAACCTGTCTCGATATTTTGAA
CCGCTGATCGCGCGGCGTTAGATTAATATGGGAAATGGCAAGGACGAACT
TCCGGGAGTTGCAGGTCCTAACAGTTAGCGCCTGGATGATGTAGGGATAC
AAAAGGCGGCGAGCGCCACTCACGGGTGGCTAAGTGGAGTTTTGGCTGGA
AGCAAGCTCCACCGAGGTCATCGCGCACCTGCTGATTCCACCCGCCGAAG
GCGAAGCCGAGGGAAGCGTGCTGTTCGACGACCTCGCACGAGCTGGAAAA
GTGTGGGGCATAAGCTAAGCCGGATTTCCTCTGTTGGCATTTGTCGGTGA
TAAATACGTGCGAGGGATATCGTGATATTCACTATTTAGAGATCCGCAGA
TCCCACGCAATGTTGTCTCGTAACTTGAGAGGCGATGCGACACAAGAATG
GCGTGCCGCTGTTGCCGGCATCATTTCTTGGGTCCCCTCCGAAGACAACA
CCCTCTGCGTGCATAGGCGTTTTGGGGAAAACTATCAAGTTCCAAGAGGC
ACGAGTTGTACAAAGCGTCCGCGCCTCGGCGGCACCAGAGATCAAAAGAT
GAGCTGACGACGTTTAACGAGACGCTATTTGAGTGCAGAGCACGCTGCCT
CTACGGAAATTTCTCGTCGTCCGTACACGAAGAACTTCTGCTGTGCGAAA
GCGTTGTACTCGAGTACCAATATTAATAGGATGGGATGGGATGGGATGGG
AATACTTCACGCAACCGAAGAGATGGTCCTTGCTCTTCTTTTGGCGCCTA
ACGATTGAAGATAATATTTTAGCGGCATCAGTAGTGCGGGACCGGGGTGT
TATTATCCGCCACCTTCGTTACATCGTTCCCTTTCTTACATCGTTATTCT
CCTCCTTCCCTTCCTTACATCGTTCTTTTTCTCCTTCCCTTCCTTACGTC
ACTCTTTTCGCGGCTCGAGCTTGCGAAAGGACACAACTGAGTGTAAATCT
GTACTTTTAGGGCGGGAGAAAATGTGCTGATTTCTCCCGTCGACGTAGCC
GAGTGACGCCTGCAGTAATGGAAAGAATACTATAGTTAGTTTTGTATCAG
GTATCTATTTAGTTTGATTTTTTAGATTTTTTATTAATATGTTAACAACG
CTATTAAATATAATTTATTTTTATACTTTCTTTTCTGCAATTTTTTTCTT
GCGGCGAGAAAAGTGACCCATAGATGAGCTGGCGTACTGTTTGTGGCTCT
TCTTGTGTTGTAGACGTTCGCCGCGGGCTCGAGGACGAAAGGCTGTTGCC
TGTTGCCTGTTGCTTGATACAGTTACAACGGTACCGCGAAAGTATTAAAA
AAAATAGTAATGTATTACGGAGTATTACTAGTACCTCTCCACGCGGGCGT
ATGATGCAACTGCAATTTTGGGGCGC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig1049:193967..208242- >mRNA_A-nodosum_M_contig1049.19.2 ID=mRNA_A-nodosum_M_contig1049.19.2|Name=mRNA_A-nodosum_M_contig1049.19.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1884bp|location=Sequence derived from alignment at A-nodosum_M_contig1049:193967..208242- (Ascophyllum nodosum dioecious)
ATGACGGATTTTGGCCATTGGGAACGCTTCGACGCAGATGCAGCGGAGGC
TGAGGTGGAGCTTCAGGCAGATGCTCGCGACAAAATTCGGGAAAGGATCT
CGCAGGAGCGAAGAGTCTTGAAGGAATGCGAGAATCGTGCGGCCATGTTG
AAGTCGGAGGCGGCGGTTCGGGCATTGAAGGCCAAGCGAGGCTCGCGACG
ACGAGGCGCCAACCGCCAGGCTCGCCCGGATTTTTCGACTGCAAACCCCG
GCGAGCCGCGTACTGACGCTGACACCAGGGCCCTATCCGAAGCACCGATC
GACTCCGCTGCCGTAGACTCGAGCGGGGAGGTTTTTCGCGCTCAAACGAG
GGCTGACGAAGCGAACGCAATCGTGAAAGGGCTGCGGAGAGGACTGGGGC
TTCGGGATGAGGTCCTCGCGAGCGCCGAGGCAGGAAACCTTTACGAGGTG
GTAACCAAGGCTCGAGAGTGCCTGTCGGAGCTCGGAGCCTTGCAGATCCT
TCTCCGTCAGGCGACACCGGCTGAGTTTGACGGCGGACCCCCGCCATTCA
CCGCAACAGACGGCAGCCACAGCGTGGAGGGAGAGCGAAGCCGCGGGTGC
AGCGACGCTCACGGCCACGGTCGCTTGCACTCGGACGCACGGTCTCACGC
CCGTGCGCACCCACAGCTAGAGCGTAACGTCAATGCCCATGGCGACAGAG
AGAAGGCGGTGTGCTGTAGCGACCGATGCCCTTCGGAGGCTGGAGAGGAT
GCTCTTGTGGGCGCGGTAAAAGTGTTAAGGAGTGCAACGGTGGCGGTCAG
GATAACCGAGGGGAATTGCCTGCTTCGGGCCGGGCGGGCGGCGCAAGCCA
CGGAGGCGTTGCGGGATCTGCTTCTCGAGCACCCGACGAGCGTTCAAGCG
TGGACAACCCGCGGGAGAGCTTTCCTGTCGATGCAAAACCACCTGCTCGC
CGGACTACACTTCGACCGTGCGCTTGAGCTCGATCTGGACTGCGCTGACG
CGGCGGACCTCAAGAAAAGCCTCCGTTTCAGGCCCGAAACCCCCGAAGAC
GGGGGACCAAGTGTGGAAGTCGGTGAATCCCGTCACTTTTTGTCGAAATG
CTTCCCAAATCGTGAAGCGCACGGTAGGACAGATCCCGGAGGAATGGCGG
GAGATTGTGGAGAAAGATCGGGAGTACCGCAGCAAGAGGCGTTTCGGCGT
TCTCTTGCCGCCGCCTGTGAGGAGTACCGCTCGGGCATGGTTCTCCACAG
AGAGGCTTTCTTTGCTTCATCGCGGGACAAGTTTTATCGGGTTCTGTCGC
TCATCAATGAAGCCGAAGATGCTGCAAGAGGGCCTGCGCATACCGTAGAG
GGAGGTGAGGAACCTGTCGCAGGCCTAGGTTCAAGGAGCTTCCAGGTTCC
TGGGTCGGTGGAAGGCGAGCACGACTGTGCGCCCGCGACGTGGTGTGCCT
CGAGAGATAGCCACTTAAATCTAGATGAGATTCGTGTCGGGTGTCATCTC
AATATCGCGGCGGCGGCGTTGCTGAGGAAGACGGACTATGAGTCCGTGGT
GCATCATTGTACGAGAGCCTTGGCGATTCTTCGGGGTAACAGTAGCAGGA
GCAGTCGCACGAACTTGCGTCGCGCACTTGTGCGTCGCGCGCAAGCTCAT
GGAGAGCTGGGCCGATTCCGACTCGCCATCGACGATTTGGAAGCAGCAGA
GGTGTCGTTCCTGGGGGAGGCTCGAGAGGTTTCTCCTCAAGAAGGGAACA
TGGGGCCCGTAAATACTACTCTGGATGGGGAGTTGGTGGATATCAGGAAG
CGCTTGGAGCGTGCGCGGTGGACGAAGATTAATATGGGAAATGGCAAGGA
CGAACTTCCGGGAGTTGCAGGTCCTAACAGTTAG back to top
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