mRNA_A-nodosum_M_contig1046.9.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1046.9.2
Unique NamemRNA_A-nodosum_M_contig1046.9.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: F5BX17_UNDPI (Meiotic nuclear division protein 1 n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=F5BX17_UNDPI)

HSP 1 Score: 305 bits (780), Expect = 9.430e-99
Identity = 152/202 (75.25%), Postives = 175/202 (86.63%), Query Frame = 1 
Query:    1 MVRKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            MV+KGLS EEKR KIL IYH +K IF+LKEIEKAASKQGVV+Q++KD+NQSLVDD LVD+DKIG SNFFWSFPSK VV R+NL++SLKRDIAKAED +  +KRKIA L  ERA+TE+RQ KLRRLQ+N+QR+K+LE EY+ LKENDPAEL+K     EVCKDGVNRWTDNTW +KSWMVKTRGM GADVDKYLQ+  DFDHV
Sbjct:    1 MVKKGLSLEEKRAKILNIYHGTKSIFSLKEIEKAASKQGVVSQTIKDVNQSLVDDGLVDMDKIGPSNFFWSFPSKAVVDRQNLIDSLKRDIAKAEDTAAVNKRKIASLVEERADTEERQLKLRRLQDNKQRVKQLESEYETLKENDPAELEKVTNVAEVCKDGVNRWTDNTWSIKSWMVKTRGMSGADVDKYLQIKADFDHV 202
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BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: D8LRU4_ECTSI (MND1 family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU4_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.150e-88
Identity = 140/202 (69.31%), Postives = 171/202 (84.65%), Query Frame = 1 
Query:    1 MVRKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            MV++GLS EEKR K+L IYHS+K I++LKEIEKAASKQGV   +VKD+NQSLVDD LVD+DKIGASNFFWSFPSKV VT++N+V++L++ IAKAED +  +KRK +ELE  RA+T  R+ KL RLQEN  RL+ELE EY++LKENDPAEL+K  R T+VCKDGVNRWTDN+W +KSWMVKT+GM G DVD+YLQ+ GDFD V
Sbjct:    1 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTAANKRKFSELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVARLTQVCKDGVNRWTDNSWCIKSWMVKTKGMSGKDVDRYLQIKGDFDLV 202
[Close]
BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: A0A7S2XYC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYC3_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.280e-59
Identity = 108/201 (53.73%), Postives = 142/201 (70.65%), Query Frame = 1 
Query:    7 RKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELE-AERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            RKGLS EEKR +IL IYHSS  ++NLKEIEK ASK GVV Q++KD+NQSL+DD LVD DKIG++NFFWSFPSKV V ++  +ESL++ I  ++     ++ K+A+LE A R ++  R+  L +L + R+R  EL+     LKENDP EL +     E  K+ VNRWTDN W VKSW VK +GM   DVD+Y+QL  DFD++
Sbjct:    5 RKGLSLEEKRQRILGIYHSSGEVYNLKEIEKIASKAGVVLQTIKDVNQSLIDDHLVDADKIGSANFFWSFPSKVYVVKKTKIESLQKQIEDSKRQLNAAQDKVADLENAGRQDSNTRREGLAKLDQERKRGSELDERLQCLKENDPEELLRLKNLQEEIKEHVNRWTDNIWAVKSWCVKKKGMPSKDVDRYMQLPQDFDYI 205
[Close]
BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: H3HEE5_PHYRM (Uncharacterized protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3HEE5_PHYRM)

HSP 1 Score: 193 bits (491), Expect = 1.610e-55
Identity = 101/202 (50.00%), Postives = 141/202 (69.80%), Query Frame = 1 
Query:    1 MVRKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            M RKG+S +EKR +IL IYH SK +FNLKE+EK  SK GVV Q+VKD+NQ+LVDD LVD DKIG+ N+FWSFPSK+  TRR  +  L++    A+D     K+ + + +  R E+E+R  KLRRL+E + +++ L  +   L ENDP  L++  RK  + K+G +RWTDN + +KSW+VK RG+ G +VDK+L +  DFD+V
Sbjct:    1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDVLVDCDKIGSGNYFWSFPSKLSQTRRRKLSELEQRHQTAQDKLVKVKQNVEKQKGLRPESEERVQKLRRLEEQKAKVQVLRTKVQHLAENDPEILEQLERKVRMAKEGSDRWTDNVYTLKSWVVKKRGVEGKEVDKWLGIKDDFDYV 202
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BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: A0A0P1AFA8_PLAHL (Protein involved in meiotic recombination/predicted coiled-coil protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFA8_PLAHL)

HSP 1 Score: 186 bits (471), Expect = 1.440e-52
Identity = 97/202 (48.02%), Postives = 142/202 (70.30%), Query Frame = 1 
Query:    1 MVRKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            M RKG+S +EKR +IL IYH SK +FNLKE+EK  SK GVV Q+VKD+NQ+LVDD+LVD DKIG+ N+FWSFPSK+  +R+  +  L++     ++     K KI E +A R+++++R  KL+RL+E + +++ L      L ENDPA L+    K  + K+G +RWTDN + +KSW+VK RG+ G +V+K+L++  DFD+V
Sbjct:    1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDALVDCDKIGSGNYFWSFPSKLSQSRKRKLSELEQCRQARQEKLDRVKEKIEEQQALRSDSDERIQKLKRLEELKVKVESLRNTMQHLAENDPAILEDLECKVGIAKEGADRWTDNVFTLKSWVVKKRGVEGKEVNKWLEIQDDFDYV 202
[Close]
BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: A0A7S3XLC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC7_HETAK)

HSP 1 Score: 184 bits (467), Expect = 2.460e-52
Identity = 97/200 (48.50%), Postives = 126/200 (63.00%), Query Frame = 1 
Query:    7 RKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            RKG+S EEKR +IL IYH  K + NLKE+EK   KQGVV QS+K++NQ+LVDD+LVD DKIG++NFFWSFPSKV                               L A R +T  R+ +L++LQ+ + R   L+   D LKENDP EL +   +TE CK+  NRWTDN W +KSW +K +GM   +VD+YLQL+ DFD+V
Sbjct:    5 RKGVSYEEKRTRILGIYHEKKEVLNLKELEKLGVKQGVVVQSIKEVNQALVDDNLVDTDKIGSANFFWSFPSKVAEL----------------------------LGAGRHDTPQRRAQLQKLQDEKAREAALDQRLDTLKENDPRELARIETETEKCKEAANRWTDNIWALKSWCIKKKGMASTEVDRYLQLSSDFDYV 176
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BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: A0A5D6Y0R0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0R0_9STRA)

HSP 1 Score: 184 bits (468), Expect = 4.100e-52
Identity = 93/200 (46.50%), Postives = 138/200 (69.00%), Query Frame = 1 
Query:    7 RKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            RKG+S EEKR +IL IYH SK +FNLKE+EK  +K GVV Q++KD+NQ+LVDD LVD DKIG+ N+FWSFPSK+   R+  +  L++  A A+D     ++ I E +++R E++DR  KL+RL E +  +K+L+ +   L +NDP  L +  R  +V K G +RWTDN + ++SW+ + RG   ++VDK+L +  DFD++
Sbjct:    4 RKGVSLEEKRARILHIYHDSKDVFNLKEVEKIGAKAGVVLQTIKDVNQALVDDGLVDCDKIGSGNYFWSFPSKLSQARKRKLGELEQRKAAAQDKLAKVRQSIDEQKSKRTESDDRAAKLQRLAELQASVKDLKAKVQHLADNDPEILAQLERSVQVAKIGADRWTDNVFTMRSWVAQKRGCASSEVDKWLGIKDDFDYI 203
[Close]
BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: K3X901_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X901_GLOUD)

HSP 1 Score: 177 bits (449), Expect = 2.620e-49
Identity = 90/200 (45.00%), Postives = 138/200 (69.00%), Query Frame = 1 
Query:    7 RKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            +KG+S EEKR ++L IYH +K +FNLKEIEK  +K GVV Q++KD+NQ+LVDD+LVD DKIG+ N+FWSFPSKV  +R+  +  L++  A  ++  +  +  I   +  R E++DR  KL+RL E ++++K L+     L ENDP  L++  RK ++ K G +RWTDN + ++SW+ + RG   ++VDK+L +  DFD++
Sbjct:    5 KKGVSLEEKRERLLRIYHDAKDVFNLKEIEKLGAKAGVVLQTIKDVNQALVDDALVDSDKIGSGNYFWSFPSKVSQSRKRKLSELEQRKAATQEKLSKVQLAIETQKTMRTESDDRVQKLQRLAELQKKVKVLKTNIHHLAENDPEILREMERKVQIAKLGADRWTDNVFTMRSWVAQKRGCASSEVDKWLGIKDDFDYI 204
[Close]
BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: A0A8K1FKH2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKH2_PYTOL)

HSP 1 Score: 177 bits (448), Expect = 3.670e-49
Identity = 88/200 (44.00%), Postives = 137/200 (68.50%), Query Frame = 1 
Query:    7 RKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            +KG+S EEKR +IL IYH SK ++N+KEIEK  +K GVV Q++KD+NQ+LVDD+LVD DKIG+ N+FWSFPSKV   R+  +  L++      +  +  K+++ + ++ R +++DR  KL+RL E +  +K+++ +   L +NDPA L+   R  +V K G +RWTDN + V+SW+ + RG    +VDK+L +  DFD++
Sbjct:    5 KKGVSLEEKRERILKIYHESKDVYNIKEIEKLGAKAGVVLQTIKDVNQALVDDALVDFDKIGSGNYFWSFPSKVSQQRKRKLSELEQRKQSTSEQLSKVKQEVEKQKSLRTDSDDRVAKLQRLAELQTHVKDMKAKIQHLADNDPAILEHLERNMQVAKVGADRWTDNVYTVRSWVAQKRGCSTGEVDKWLGIKDDFDYI 204
[Close]
BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Match: A0A3M6VFI0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFI0_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.480e-48
Identity = 97/196 (49.49%), Postives = 137/196 (69.90%), Query Frame = 1 
Query:   19 SAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQSLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTTSKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAELQKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFDHV 606
            +A EKR ++L IYH SK +FNLKEIEK  SK GVV Q+VKD+NQ+LVDD+LVD DKIG+ N+FWSFPSK+  +R+  +  L++      +     K+ I E +A R E+E+R  KLRRL+E + +++ L  +   L ENDPA L++  RK+ V K+G +RWTDN + +KSW+V  RG+ G +VDK+L +  DFD+V
Sbjct:  268 AAFEKRERLLRIYHESKEVFNLKEIEKLGSKAGVVLQTVKDVNQALVDDTLVDCDKIGSGNYFWSFPSKLSQSRKRKLNELEQRRQSLNEKLLRVKKSIEEQKALRLESEERVLKLRRLEEQKAKVQALRTKVQHLAENDPAMLEELERKSCVAKEGSDRWTDNVYTLKSWVVNKRGVEGREVDKWLGIKDDFDYV 463
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1046.9.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F5BX17_UNDPI9.430e-9975.25Meiotic nuclear division protein 1 n=1 Tax=Undaria... [more]
D8LRU4_ECTSI1.150e-8869.31MND1 family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S2XYC3_9STRA1.280e-5953.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H3HEE5_PHYRM1.610e-5550.00Uncharacterized protein n=24 Tax=Phytophthora TaxI... [more]
A0A0P1AFA8_PLAHL1.440e-5248.02Protein involved in meiotic recombination/predicte... [more]
A0A7S3XLC7_HETAK2.460e-5248.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5D6Y0R0_9STRA4.100e-5246.50Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3X901_GLOUD2.620e-4945.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1FKH2_PYTOL3.670e-4944.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VFI0_9STRA1.480e-4849.49Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1046contigA-nodosum_M_contig1046:93734..98913 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRU4
Preferred nameMND1
PFAMsMnd1
Model size1489
Max annot lvl2759|Eukaryota
KEGG koko:K11997,ko:K22381
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000280,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0007275,GO:0008150,GO:0008152,GO:0009314,GO:0009553,GO:0009555,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0022402,GO:0022414,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0033554,GO:0034641,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0048229,GO:0048285,GO:0048856,GO:0050896,GO:0051321,GO:0051716,GO:0061982,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140013,GO:1901360,GO:1901363,GO:1903046
Exons5
Evalue1.19e-93
EggNOG OGsCOG5124@1|root,KOG3433@2759|Eukaryota
Ec32 ortholog descriptionMND1 family
Ec32 orthologEc-08_002470.1
EC2.3.2.27
Descriptionhomologous recombination
Cds size609
COG categoryD
BRITEko00000,ko01000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1046.9.2prot_A-nodosum_M_contig1046.9.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1046 93734..98033 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866420.966075-CDS-A-nodosum_M_contig1046:93733..938711680866420.966075-CDS-A-nodosum_M_contig1046:93733..93871Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1046 93734..93871 +
1680866420.9786782-CDS-A-nodosum_M_contig1046:96379..965201680866420.9786782-CDS-A-nodosum_M_contig1046:96379..96520Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1046 96380..96520 +
1680866420.990528-CDS-A-nodosum_M_contig1046:97097..972101680866420.990528-CDS-A-nodosum_M_contig1046:97097..97210Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1046 97098..97210 +
1680866421.07687-CDS-A-nodosum_M_contig1046:97453..975351680866421.07687-CDS-A-nodosum_M_contig1046:97453..97535Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1046 97454..97535 +
1680866421.0861597-CDS-A-nodosum_M_contig1046:97898..980331680866421.0861597-CDS-A-nodosum_M_contig1046:97898..98033Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1046 97899..98033 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866421.0953677-UTR-A-nodosum_M_contig1046:98033..989131680866421.0953677-UTR-A-nodosum_M_contig1046:98033..98913Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1046 98034..98913 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1046.9.2

>prot_A-nodosum_M_contig1046.9.2 ID=prot_A-nodosum_M_contig1046.9.2|Name=mRNA_A-nodosum_M_contig1046.9.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=203bp
MVRKGLSAEEKRGKILAIYHSSKGIFNLKEIEKAASKQGVVTQSVKDINQ
SLVDDSLVDVDKIGASNFFWSFPSKVVVTRRNLVESLKRDIAKAEDASTT
SKRKIAELEAERAETEDRQGKLRRLQENRQRLKELEIEYDALKENDPAEL
QKAIRKTEVCKDGVNRWTDNTWQVKSWMVKTRGMCGADVDKYLQLTGDFD
HV*
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mRNA from alignment at A-nodosum_M_contig1046:93734..98913+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1046.9.2 ID=mRNA_A-nodosum_M_contig1046.9.2|Name=mRNA_A-nodosum_M_contig1046.9.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5180bp|location=Sequence derived from alignment at A-nodosum_M_contig1046:93734..98913+ (Ascophyllum nodosum dioecious)
ATGGTCAGGAAAGGGCTGTCTGCCGAAGAAAAGCGGGGGAAAATATTGGC
TATCTACCACTCTTCCAAGGGTATATTCAACCTCAAGGAAATCGAGAAGG
CTGCATCTAAGCAAGGCGTCGTCACTCAAAGCGTGAAGGTAAACTGTATA
TTGTAGTCCATAGAGCCACACCTTATAACCTAGAGCATTAGAGCAGCGAT
ATCTTTGCGTATTTGCTGCCTGTTTCAAGAAACGTTGCCAATCTGCGGAG
CATGTTTTCTCGATCAATACTACAGCATATATAAAGAGATTAGTCAAATG
CAAGCAGCACTCAATGCTACTTCGCGGTCCGTCGAGCAGGGCAGCGCTCC
ATAACTTGATGCTACCACAGTTGATGTGCGGTACTGCTTTGGCCTCGGTC
ACGTTTCGAAGCGAAGCGTATGCCATTCTCGTACAAGTGTACCAATAATA
CAATATTACCGGAATATTAGAATTCCTATTAACAGTTGATGTGCGGTACT
GCTTTGGCCTCGGTCACGTTTCGAAGCGAAGCGTATGCCATTCTCGTACC
AGTGTACCTGGTACCAATTACTCGTACGTACGAGTACTAGAATTGTGTTA
CAAGTACGTGAACCAACAGCAAGTTGTTGTTGCTCCTGATTCTCAACATC
AAAGTCCAACTTTTTCTTCATTTTTCATATTTCATCCTTCTCTGTCCTGA
GACCGTTTCTCATGCTGTCGAAGAAGACTCTACTTTTCCGATCAGCATTA
TCCGGCACAACTTTTTCGATCGAAATCCTGTCGGAAAAGTTCACGTTTTT
CCACGTGGCGACCGCGTTGAAAAATGCGATCGATGTGATATTTTTTCCCC
TGAAGGTGGATGCTCAAAAGGCTTTTAGATGCGTTCAGATTTTTCTTTAA
AATGTTGACAGTCCCTCAGCACACGCCTTCGACATTCCCAAAAATGATTG
ACCAAAAAGCGATCAGCATAAGAACAGCAGGTGGATCGGAAAAGGGTCTT
TTCGACAGCATTTTTCGACAGCATAAGAAATGGCCTGGCAGACTCTTGGG
AGAAACCCGTATCTCTGATTCGCTTACAGTATCTAAAAAGGTCGAGGAGA
CCCCAAATCCCCTCTTTGCCATAGTCGAGCGCGCGTAAGTTGGGTCTTTC
GTGGTGGGGTCGGCTTTTCGCTTCAACGATACTATCTATGTGTGTTGTAT
GTCCTATACCAACATAGCGCGCGCGTGCCTGTGATGATGACGTTCATCAG
CAGATTGGGCACCAACCGGTATATCATTATATCAGTATATATAGGGCTGG
GCCCCAGACTTTTAAGTTTCAAATACCATTAATATCAGGTACGGAACTAA
TTTAGTACTTGTGGCAACTTTTAACACCACTGCCATCCCGCTTGCGTTCT
CAAAGCGATCGATGCTTCGGAGTATGTACATGTGGTGCACTGCATTTGGA
ACGAGGTCCAATCGTATATTTTACACGATGCTCCCCCCCCCGATACTGTA
ACTGTTTGTATCGCACATGTCCACTACGGTATTAATATGATGGAGCAATG
CCAGTATTGATATCAATATTAGTATTAATAGTGGGTGTGGGAAAAGAGGG
GCGCAGATTATTTCTAGTGTTTGGGGATACTGTACTATTTATTAATACAG
CATCCCTGAAAAAGCAGCACCCTTCAGTCGAGCCATCTTGAGGACTACTG
GCCCTTGCCGGCGAACGCTCGGCAGTGAACGCCATCGATACGCACTTTCG
CGACCCGACAAACTGGGGACTAACTCGATGACGGTTGACGGTTGAGGACA
CCGTCACGGAAAGCGGGAGAAATGAAGGGGGTCCGCGAGTAAGCATGAGA
TTGATGATTGATGATTGATGATTCATGATTGATGATCGATGATTCATGAT
TCATGATTCAGTTAACCTGGGTGCGAAGAATGAGCGGGCTGACGCGAAAG
GGTAGGGCCGATTCTGTCTCGAGACCAACTATTATATTAATACTTTTTCT
CAGACGCGAAAGGGGACAGAGCTGACCACTATAGCTGACAGGATTGGCAA
GAAATACCCGTTCGATATAGACTGTGATTCAAGTTATAACCATACACACA
CACACACACACATGGTCCAAAATAAAAGCGCTGAATTTGGATCGCTATCA
AAAAGCCTTGGCGTGAACTGGGGAGAGATAGGTAAATGGATCCCTTCGTG
CCCAAAGACGTGATGGATGGAGTGCATCATGATTTTATTTTTTTTCACTT
ACAATATGTTCTCCTTACAAGACGATCACGGCCCTCTAGACAGTACTTCA
CTTATCCGACTGCAACACTGTTCATCCCGCCAGTGGTATTACCAGCTCGG
CGCTCTCTTACTGTACTTACTGTACTGTGATGGATGTTCAGCATTCTTAA
ACCTTGTGAACCTTACGATCCAAATTTTATTTTCCGTAACAGATACCTCG
GTTCGTCGTTCGTTAAGTGCCATGGCGAGCTTGTTCTATGCAGCGAGTTC
ATGATGCAACACCTTGTACAGAGCAAAGTAGCTCTCCGAACAAAGTCAGA
TGAGGAAATCTTTCCTCTGATAGACATGCCTCAAACATATAAGCGGTGCT
CATCGGACCAGGAATGGCTCCCCTGTTGCCCTCCCGACCCTCACAGGACA
TCAACCAGTCTCTCGTGGATGATAGTCTCGTGGACGTGGACAAGATCGGG
GCATCTAATTTCTTTTGGTCCTTCCCCAGCAAAGTCGTCGTCACCCGACG
AAACTTGGTGGAATCTCTCAAGCGCGACATCGCAAAGGTAGGTCGTGCTC
TTCCCCTTCAGATGTCGAGTGCTCGCGTGAATCGTGGTGCTCCGTCGTGC
TCAATTCAGGATCATGCTCGCGTGCGACGGATGAGGTTCGCAAGTTGTGG
CGTGGACCACACGGAAGTGACTTACTATTTGATAACACGAGAGGAGGGTC
CCTCGAAGAATATTCTAACATTCAAAAGCTCCACTGTTTCTCTCCAGAGC
ATCGCCCTCGATCTTTCACCGAAGAGGTCATTTTCCGCCTTGCGGCGTTC
GTTTAACGTTTAACTTGGGCCGATGCGTTATTAATAGTTCGATGTGGTGT
GCACGACGTTTTTCCCGCAAGTAGTCTCTTGGCTATTAACGAGCTGGCAG
TCCTCTTTTCCTTTTGTACCCGAACTACTAACACTACACGTTCCAAGTAC
CAGATATGAGTACGGAGATTATCAAATTATGATCTAATACCCCCCCCTCC
CACCCCCACGGCATACCACAAGTTAGGTTAAAGTTAACACAAGTTAAGTA
CGTTAAGTTCATTTTCCAGTCCCTACATTCTCATAACGAGACTGATGATT
TGTCCTCTATTCAGGCCGAAGACGCTTCCACGACTAGCAAACGCAAAATT
GCCGAGCTTGAAGCAGAGCGCGCGGAGACGGAAGATAGGCAGGGAAAGCT
CCGAAGACTACAAGAAAACAGGCAGCGGTGAGATACTGATACAATTCACT
CTTATAGTAACAATGACTGCGTCACGACACGCAACCTGTCTGTGGTGACA
ATTTCAAGGAGCAGATACAAGACATAATTATAGATAAGACTTTCATATCA
AGGCGCTAAGTTCTTAGAGCCTACGCTCTAATATTGAAGCTTGGATACCT
CGGAGGACGTGATGAGCTTGCGCGCCGCCTAGCATCGATCCACGTCCTCT
TCCTTGCTGGCCGCACACAGGTTGAAGGAGCTGGAAATAGAGTACGATGC
ACTGAAAGAAAACGATCCAGCCGAGCTGCAGAAGGCAATTAGGAAGACAG
AGGTGCGTCTGGTGATATAGCCTACGATATTCACGCAATTTACAAAGGTT
TCGCCTGGAAAAGGTCGTCCTTTAGGAATCAGTTTTATCATGCCTTGTCC
CTCAGGTTTCATTACTTCCTTGCCTCCGTTCGCTTCACGAGTTGAAGAAA
TTGTGTACTACGGTTCCAATGGAACTTGCTGTTTATACTACGTTAGAGTA
CCCCACCGCCGAGTTACGGGTTTGATTTCGTGTATTCGATGTTCGCAGTA
ACGTTGGCCCTTATCGAGCTCTCTGCTCGTGTTAATTCGCGTTGGAGCCA
GAATATTCTCCGTCCGCTTGACCGATGTCATCCATCCATTCACCTGCCCA
CCTCACGCAAGCAAGGTGTGCAAAGATGGGGTGAATCGCTGGACAGACAA
CACTTGGCAGGTCAAAAGCTGGATGGTTAAGACCAGGGGCATGTGCGGGG
CAGACGTGGACAAATACCTTCAGCTCACCGGCGATTTTGACCACGTTTGA
TGGCCTTCTGACCGACGTTGGCCCATAGACCTGAATCGACCCGCTGCTTC
GCGTCTAGCCGATCGAATCTGATTCCACGCGTGCCGCCCGCTTTGTTAGG
CTAGCTCCTTCTACAGATGGACGTCATATGTGCGATAATCAATCTCATAT
GAAGGTTCAACATATATGTTGTACCTGGCACAAGATATCGGCGGACATCG
CGGAAATTTGCGGTAGTTAGAGCCGCTCGTGGTTAGCTTCGTTTCTTATT
ATAATACTGATGTACGGTGCGTTTCGAATGGATTGCGATGCCCGCTAAGT
GAATGAAGGCGCACGTGAAAACCCAAATGTGTAGCATGTGTTTGTTTGCG
CAGATTCAATCCGAAGCTTAACCAGTCGATCACCTCTTCCAACGAAATAA
ATCGATTTGTACAAGCATTCGTTGGTATCGTGACTTCTCCCGGGCAAAGT
TGCATTTTACGCTGCTGGGCCGCGCCCCCAATCCATGTTGTATGGGTTGG
CGCATCTTAAGCCCCATTATATTCACAAAAAATATAGGTTGTTGATCTCC
GCGAGAGTAAGGAGGGAACAATATTTTAAAAGAAAAATCTGAACGCATCT
AAAAAACCATCCGAGCATCCACCCAGTCAGAGGGGCAAATTGTCAAAACG
TTTGGGTGGGAACATTGGTTGTAAGGATAAAAACTCGTAGTGGTATTTTT
TGTGGGTTTACGAGTGTGCATCTTATACTCTTTCACGAAAAGTTTGTCAG
ATGCACTTGCTTATCGAGGGCGATGGGGAATACGGTAATCGAACCTCTCG
CCATTCTATTATTAGTAACATGTCTTTTCTGTGTCCGTTCCTGGCGACGA
TGTCCTTTGCAGGCTACCTTTCTGTCCGTT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1046:93734..98913+

>mRNA_A-nodosum_M_contig1046.9.2 ID=mRNA_A-nodosum_M_contig1046.9.2|Name=mRNA_A-nodosum_M_contig1046.9.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=609bp|location=Sequence derived from alignment at A-nodosum_M_contig1046:93734..98913+ (Ascophyllum nodosum dioecious)
ATGGTCAGGAAAGGGCTGTCTGCCGAAGAAAAGCGGGGGAAAATATTGGC
TATCTACCACTCTTCCAAGGGTATATTCAACCTCAAGGAAATCGAGAAGG
CTGCATCTAAGCAAGGCGTCGTCACTCAAAGCGTGAAGGACATCAACCAG
TCTCTCGTGGATGATAGTCTCGTGGACGTGGACAAGATCGGGGCATCTAA
TTTCTTTTGGTCCTTCCCCAGCAAAGTCGTCGTCACCCGACGAAACTTGG
TGGAATCTCTCAAGCGCGACATCGCAAAGGCCGAAGACGCTTCCACGACT
AGCAAACGCAAAATTGCCGAGCTTGAAGCAGAGCGCGCGGAGACGGAAGA
TAGGCAGGGAAAGCTCCGAAGACTACAAGAAAACAGGCAGCGGTTGAAGG
AGCTGGAAATAGAGTACGATGCACTGAAAGAAAACGATCCAGCCGAGCTG
CAGAAGGCAATTAGGAAGACAGAGGTGTGCAAAGATGGGGTGAATCGCTG
GACAGACAACACTTGGCAGGTCAAAAGCTGGATGGTTAAGACCAGGGGCA
TGTGCGGGGCAGACGTGGACAAATACCTTCAGCTCACCGGCGATTTTGAC
CACGTTTGA
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